Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

OG0005116

Physical Location & Seq

Genomic Coordinates Forward (+)

6081459 .. 6091461

Gene Structure 10003 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3054 bp

ATGGTCAGGCAGCCAGCAGTTTGGAATTTAGGTCTTTGTATCACTATGAATGGAGGCTTACCTAAAGAAAGCTACAAGCCTACTAGGACGAAGCTTGAAGAGGAGGGTCATACAGAGGCAATGTCTAGCTCTGCAAAAGCTTTGGATCCTGCTTTTCAGGGAGCAGGTCAAAGAGTAGGGACTGAAATTTGGCGGATTGAGGACTTTCAACCAGTTCCTTTGCCAAAATCTGAACATGGAAAATTCTATATGGGGGATTCTTATATTGTCTTGCAGACAACACAAAACAAAGGGGGTGCTTATCTTTATGACATACACTTCTGGATTGGGAAAGATACAAGTCAGGATGAAGCTGGGACAGCAGCTATTAAGACCGTTGAACTAGACGTAGTTCTTGGAGGACGTGCAGTGCAACATAGAGAAATTCAAGGCCATGAGTCTGACAAATTTTTGTCATACTTAAAACCTTGTATCATACCATTGGAGGGGGGCGTTGCTTCTGGATTTAAAAAGGCTGAGGAAGAGGAATTTGAAACTCGGTTGTATACCTGCAAAGGAAAACGAGTTGTCAGATTGAAGCAGGTTCCTTTTGTGCGTTCCTCACTGAATCATGATGATGTGTTCATCCTGGACACTCAAAACAAGATCGATCAGTTCAACGGAGCAAATTCTAATATCCAGGAGAGGGCAAAGGCTTTGGAAGTAATCCAGTTTTTGAAGGAAAAGTATCATGATGGAACTTGTGATGTTGCAATAGTTGATGATGGGAAGCTTGATACAGAGTCCGATTCTGGTGAGTTTTGGGTCCTAATGGGTGGTTTTGCTCCAATTGCAAAGAAGGTAACCACTGAAGATGATGTGGTTCCAGAAGCTACTCCTGCTATACTGTATAGCATAACTGACGGTGAAGTGAAGACTGTAGAAGGTGAACTATCCAAATCCTTGCTTGAAAACAACAAATGCTACTTACTGGACTGTGGTTCAGAGGTATTTGTTTGGGTCGGCCGGGTGACACAAGTGGAGGACAGAAAATCTGCAAGCCAAGCAGCTGAGGAATTTCTTGCTAGTCAGAATAGACCAAAGTCAACACGAATAACCCGGGTTATTCAAGGTTATGAGACACATTCATTCAAGTCCAACTTTGATTCTTGGCCATTAGGATCAGCAACTTCTGGTACCGAGGAGGGAAGAGGAAAAGTAGCAGCTTTGCTGAAGCAACAAGGTGTTGGTTTAAAGGGCATTGCAAAAGGTGCTCCTGTAAATGAGGAGGTCCCACCTTTGCTAGAAGGAGGCGGAAAGATGGAGGTATGGTGTATCAATGGTGGTGCCAAGACTCCTCTGTCTAAGGAGGATATTGGTAAATTTTACAGTGGAGATTGCTATATCATTCTCTATACTTACCACTCTGGTGATAGAAAAGAAGATTACTTTTTGTGCTGTTGGTTTGGAAAGGATAGTGTTGAGGAGGACCAGAAAACTGCTGCTCATTTGGCTAGCACAATTTCCAACTCACTGAAGGGAAGACCAGTGCAGGGTCACATATTTCAAGGTAAAGAGCCACCACAGTTAGTAGCACTTTTCCAGCCTATGGTGGTCCTGAAGGGTGGCTTGAGCTCTGGCTATAAGAAATTGGTTGAGGAGAAAGGTCTGATGGATGAAGCGTATACAGCAGATTGTGTGGCACTCTTTCGCTTATCTGGAACTTCTGTTCATAACAATAAAGCAGTGCAAGTTGATGCGGTGGCAACATCGTTGAACTCTACCGAGTGTTTCATTCTGCAATCTGGGTCCTCAATGTTTGCCTGGATTGGAAATCAATGCACCATTGAGCAGCAACAGTTAGCAGCAAAACTTGCAGAGTTTTTGAAGCCAGGAGTTACTTTAAAACATGCTAAAGAGGGAACTGAGAGCTCATCCTTCTGGTTTGCTCTAGGAGGGAAACAAAGTTACACCAGCAATAAAGTTTCTCAGGAGATTGTCAGAGATCCCCACCTGTTCACATTCTCGTTTAACAGAGGAAAGTTTCAGGTAGAGGAAATTTACTACTTCACTCAAGATGATCTGCTGACAGAGGATATCCTTATACTTGATACGCATGCCGAAGTGTTTGTTTGGGTTGGTCAATGTGTAGACTCGAAAGAAAAGCAAAATGCTTTTGAAATTGGCAAGAAATACATAGCGCTGGCAGCATCTTTGGAGGGTTTGGCTCCTAATGTACCATTATACAAAGTTACTGAAGGAAATGAACCTCGCTTCTTTACAACATACTTTTCATGGGATCTTTCAAAAGCCACTGTTCAAGGAAACTCATTCCTGAAGAAGGTGTCAATACTCTTTGGAATTGGCCATGCTGTGGAGGACAAGTCCACTGGGAATCAAGGAGGACCAAGGCAAAGAGCTGAAGCCTTAGCTGCTTTATCATCTGCATTCAATCCATCCTCTGGAAAGTCACCCCTAACGGGCCAGGATAAGTCCAACGGATCGAGTGAAGGACCGAGGCAAAGAGCAGAAGCTTTAGCTGCTTTATCTTCTGCATTTAATTCATCCTCTGGAAACAAGCCTTCTCTTCCCAAGCCATCTGCTTCAGGTCGAGGATCACAAAGAGCTGCAGCAGTTGCTGCGCTTTCAAATGTTCTTACAGCTGAAAAGAGTAGGTTAACACCGGATGCTTCTCCTTTGCAAAGCCCTCCCTCAGAAACTAGTGCTTCTGCTGACGCAAAAAGTGATTTTTTTTCTGAAACAGAGGGTCCTTGGGAACTTCCTGAAGTCAAGGAGACAGGTGAAGCTGCACCTGTTTCCGAAGGCAGTGAAGAGGATTCAGAACAAAAGACACTGCAGGACGAGAGTGATAGTGAAAGTAGTCGCAGTACTTTCAGTTATGACCAACTGAGGGCTAAATCCAACAATCCTGTAACCGGCATTGATTTTAAGAGAAGAGAGACCTATCTCTCTGATGAGGAGTTTCAGACCATATTTGGGATGCCGAAAGATGCTTTCTATCGACTGCCAAAGTGGAAGCAAGACATGCAGAAGAGGAAAGCTGATTTATTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001558 GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005856 GO:0005884 GO:0006996 GO:0007010 GO:0007015 GO:0008064 GO:0008092 GO:0008150 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009987 GO:0010639 GO:0010817 GO:0015629 GO:0016043 GO:0022607 GO:0030029 GO:0030036 GO:0030832 GO:0030833 GO:0030834 GO:0030835 GO:0030837 GO:0031333 GO:0032271 GO:0032272 GO:0032432 GO:0032535 GO:0032879 GO:0032956 GO:0032970 GO:0033043 GO:0040008 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043242 GO:0043244 GO:0043254 GO:0044085 GO:0044087 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0044877 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051014 GO:0051015 GO:0051017 GO:0051049 GO:0051128 GO:0051129 GO:0051493 GO:0051494 GO:0051693 GO:0061572 GO:0065007 GO:0065008 GO:0071840 GO:0090066 GO:0097435 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0110053 GO:1901879 GO:1901880 GO:1902903 GO:1902904 GO:2000012

KEGG Pathways

Metabolic & Signaling

ko04666 ko04810 ko05203 map04666 map04810 map05203

Pfam Domains

Protein Families

Gelsolin VHP

Protein Analysis

1018

Amino Acids

111.59

Weight (kDa)

5.38

Isoelectric Point (pI)

42.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Gelsolin	PF00626	70 - 151	2.2e-12	Gelsolin repeat
Gelsolin	PF00626	190 - 257	1.2e-08	Gelsolin repeat
Gelsolin	PF00626	306 - 377	1.1e-12	Gelsolin repeat
Gelsolin	PF00626	450 - 522	4.8e-09	Gelsolin repeat
Gelsolin	PF00626	572 - 640	3.3e-07	Gelsolin repeat
VHP	PF02209	982 - 1017	1.2e-16	Villin headpiece domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0005116)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G41740 AT2G41740 AT3G57410 AT3G57410 AT3G57410 AT3G57410 AT3G57410 AT3G57410 AT3G57410 AT3G57410 AT3G57410 AT3G57410
fragaria_vesca	FvH4_6g23900 FvH4_6g23900 FvH4_6g23900 FvH4_6g23900
malus_domestica	MD12G1074400.v1.1 MD14G1072600.v1.1
prunus_persica	Prupe.7G059400_v2.0.a1
pyrus_communis	pycom12g06410 pycom14g06250
rosa_chinensis	RchiOBHm_Chr3g0482581
rosa_laevigata	RLG00000023341
rosa_roxburghii	Rroxscaffold_6G00399140
rosa_rugosa	Rorug03G0197000 Rorug03G0197100
rosa_samantha	Rh3AG248500 Rh3BG283600 Rh3DG277400
rosa_wichuraiana	Rw3G022440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1339
Acc36I	ACCTGC	3 cut(s)	155, 557, 571
Acc65I	GGTACC	1 cut(s)	1175
AccB1I	GGYRCC	2 cut(s)	1175, 1325
AccB7I	CCANNNNNTGG	3 cut(s)	1588, 2353, 2441
AccI	GTMKAC	3 cut(s)	545, 1664, 2130
AciI	CCGC	3 cut(s)	193, 1293, 1739
AclWI	GGATC	7 cut(s)	140, 153, 1168, 1979, 2286, 2488, 2602
AcoI	YGGCCR	3 cut(s)	1003, 1151, 2344
AcuI	CTGAAG	9 cut(s)	870, 1232, 1535, 1619, 2256, 2336, 2421, 2568, 2784
AfaI	GTAC	3 cut(s)	1177, 2217, 2869
AfeI	AGCGCT	1 cut(s)	2181
AhlI	ACTAGT	1 cut(s)	2699
AjiI	CACGTC	1 cut(s)	404
AjnI	CCWGG	5 cut(s)	627, 678, 1802, 1870, 2463
AleI	CACNNNNGTG	1 cut(s)	1407
AloI	GAACNNNNNNTCC	2 cut(s)	1692, 1724
Alw21I	GWGCWC	3 cut(s)	1255, 1616, 1913
Alw26I	GTCTC	3 cut(s)	1112, 2768, 2933
AlwI	GGATC	7 cut(s)	140, 153, 1168, 1979, 2286, 2488, 2602
AlwNI	CAGNNNCTG	1 cut(s)	2618
Ama87I	CYCGRG	1 cut(s)	1098
Aor51HI	AGCGCT	1 cut(s)	2181
AoxI	GGCC	5 cut(s)	430, 1003, 1151, 2344, 2461
Asp718I	GGTACC	1 cut(s)	1175
AspLEI	GCGC	2 cut(s)	2182, 2623
AspS9I	GGNCC	9 cut(s)	805, 1270, 1468, 1594, 1788, 2384, 2461, 2492, 2747
AsuC2I	CCSGG	3 cut(s)	1007, 1099, 1100
AsuHPI	GGTGA	7 cut(s)	806, 917, 938, 1021, 1421, 2442, 2792
AsuNHI	GCTAGC	1 cut(s)	1493
AvaI	CYCGRG	1 cut(s)	1098
AvaII	GGWCC	8 cut(s)	805, 1270, 1468, 1594, 1788, 2384, 2492, 2747
BalI	TGGCCA	2 cut(s)	1153, 2346
BamHI	GGATCC	1 cut(s)	145
BanI	GGYRCC	2 cut(s)	1175, 1325
BanII	GRGCYC	2 cut(s)	1616, 1913
BbsI	GAAGAC	2 cut(s)	920, 1528
Bbv12I	GWGCWC	3 cut(s)	1255, 1616, 1913
BbvCI	CCTCAGC	2 cut(s)	516, 1050
BccI	CCATC	6 cut(s)	728, 758, 1294, 1645, 2443, 2584
BciT130I	CCWGG	5 cut(s)	629, 680, 1804, 1872, 2465
BcnI	CCSGG	3 cut(s)	1007, 1099, 1100
BcoDI	GTCTC	3 cut(s)	1112, 2768, 2933
BcuI	ACTAGT	1 cut(s)	2699
BfaI	CTAG	9 cut(s)	84, 126, 383, 1065, 1283, 1494, 1931, 2700, 3052
BfmI	CTRYAG	3 cut(s)	918, 2607, 2834
BfoI	RGCGCY	1 cut(s)	2183
BfuAI	ACCTGC	3 cut(s)	155, 557, 571
BmcAI	AGTACT	1 cut(s)	2869
Bme1390I	CCNGG	8 cut(s)	629, 680, 1007, 1099, 1100, 1804, 1872, 2465
Bme18I	GGWCC	8 cut(s)	805, 1270, 1468, 1594, 1788, 2384, 2492, 2747
BmeT110I	CYCGRG	1 cut(s)	1098
BmgBI	CACGTC	1 cut(s)	404
BmgT120I	GGNCC	9 cut(s)	805, 1270, 1468, 1594, 1788, 2384, 2461, 2492, 2747
BmrFI	CCNGG	8 cut(s)	629, 680, 1007, 1099, 1100, 1804, 1872, 2465
BmrI	ACTGGG	1 cut(s)	2379
BmsI	GCATC	5 cut(s)	1726, 2198, 2656, 2970, 2980
BmtI	GCTAGC	1 cut(s)	1497
BmuI	ACTGGG	1 cut(s)	2379
BoxI	GACNNNNGTC	1 cut(s)	1081
BpiI	GAAGAC	2 cut(s)	920, 1528
Bpu10I	CCTNAGC	3 cut(s)	516, 1050, 2407
BpuEI	CTTGAG	2 cut(s)	1630, 2037
BpuMI	CCSGG	3 cut(s)	1007, 1099, 1100
Bsa29I	ATCGAT	1 cut(s)	648
BsaI	GGTCTC	1 cut(s)	2933
BsaJI	CCNNGG	5 cut(s)	1098, 1179, 2387, 2495, 2750
BsaWI	WCCGGW	1 cut(s)	2662
BsaXI	ACNNNNNCTCC	4 cut(s)	1295, 1325, 2348, 2378
Bse118I	RCCGGY	1 cut(s)	2915
Bse1I	ACTGG	5 cut(s)	212, 709, 975, 1526, 2374
Bse3DI	GCAATG	2 cut(s)	126, 1239
BseBI	CCWGG	5 cut(s)	629, 680, 1804, 1872, 2465
BseCI	ATCGAT	1 cut(s)	648
BseDI	CCNNGG	5 cut(s)	1098, 1179, 2387, 2495, 2750
BseGI	GGATG	8 cut(s)	352, 624, 1660, 1913, 2435, 2543, 2671, 2985
BseMI	GCAATG	2 cut(s)	126, 1239
BseMII	CTCAG	6 cut(s)	507, 1041, 1896, 1982, 2706, 2879
BseNI	ACTGG	5 cut(s)	212, 709, 975, 1526, 2374
BseRI	GAGGAG	7 cut(s)	116, 1196, 1280, 1326, 1478, 1652, 2972
BseX3I	CGGCCG	1 cut(s)	1003
BseYI	CCCAGC	1 cut(s)	353
BsgI	GTGCAG	3 cut(s)	426, 1550, 2772
Bsh1285I	CGRYCG	1 cut(s)	1006
BshFI	GGCC	5 cut(s)	432, 1005, 1153, 2346, 2463
BshNI	GGYRCC	2 cut(s)	1175, 1325
BshVI	ATCGAT	1 cut(s)	648
BsiEI	CGRYCG	1 cut(s)	1006
BsiHKAI	GWGCWC	3 cut(s)	1255, 1616, 1913
BsiHKCI	CYCGRG	1 cut(s)	1098
BsiSI	CCGG	4 cut(s)	1006, 1099, 2663, 2916
BslFI	GGGAC	3 cut(s)	193, 370, 1256
BsmAI	GTCTC	3 cut(s)	1112, 2768, 2933
BsmFI	GGGAC	3 cut(s)	193, 370, 1256
BsmI	GAATGC	1 cut(s)	2426
BsnI	GGCC	5 cut(s)	432, 1005, 1153, 2346, 2463
Bso31I	GGTCTC	1 cut(s)	2933
BsoBI	CYCGRG	1 cut(s)	1098
Bsp1286I	GDGCHC	3 cut(s)	1255, 1616, 1913
Bsp143I	GATC	9 cut(s)	145, 645, 649, 1160, 1984, 2059, 2278, 2480, 2594
BspACI	CCGC	3 cut(s)	193, 1293, 1739
BspANI	GGCC	5 cut(s)	432, 1005, 1153, 2346, 2463
BspCNI	CTCAG	6 cut(s)	508, 1042, 1897, 1981, 2705, 2880
BspDI	ATCGAT	1 cut(s)	648
BspHI	TCATGA	2 cut(s)	610, 730
BspMAI	CTGCAG	2 cut(s)	2611, 2838
BspMI	ACCTGC	3 cut(s)	155, 557, 571
BspOI	GCTAGC	1 cut(s)	1497
BspPI	GGATC	7 cut(s)	140, 153, 1168, 1979, 2286, 2488, 2602
BspT107I	GGYRCC	2 cut(s)	1175, 1325
BspTNI	GGTCTC	1 cut(s)	2933
BsrDI	GCAATG	2 cut(s)	126, 1239
BsrFI	RCCGGY	1 cut(s)	2915
BsrI	ACTGG	5 cut(s)	212, 709, 975, 1526, 2374
BssAI	RCCGGY	1 cut(s)	2915
BssECI	CCNNGG	5 cut(s)	1098, 1179, 2387, 2495, 2750
BssMI	GATC	9 cut(s)	145, 645, 649, 1160, 1984, 2059, 2278, 2480, 2594
BssNAI	GTATAC	2 cut(s)	546, 1665
BssT1I	CCWWGG	2 cut(s)	2387, 2750
Bst1107I	GTATAC	2 cut(s)	546, 1665
Bst2UI	CCWGG	5 cut(s)	629, 680, 1804, 1872, 2465
Bst4CI	ACNGT	9 cut(s)	376, 888, 905, 919, 977, 1370, 1566, 1839, 2296
Bst6I	CTCTTC	7 cut(s)	93, 516, 1183, 2571, 2805, 2929, 3026
BstAPI	GCANNNNNTGC	5 cut(s)	1250, 1853, 2615, 2618, 3025
BstC8I	GCNNGC	5 cut(s)	15, 1039, 1495, 2097, 2184
BstDEI	CTNAG	8 cut(s)	516, 1050, 1344, 1905, 1968, 2407, 2692, 2888
BstEII	GGTNACC	1 cut(s)	841
BstENI	CCTNNNNNAGG	1 cut(s)	2318
BstF5I	GGATG	8 cut(s)	352, 624, 1660, 1913, 2435, 2543, 2671, 2985
BstH2I	RGCGCY	1 cut(s)	2183
BstHHI	GCGC	2 cut(s)	2182, 2623
BstKTI	GATC	9 cut(s)	148, 648, 652, 1163, 1987, 2062, 2281, 2483, 2597
BstMAI	GTCTC	3 cut(s)	1112, 2768, 2933
BstMBI	GATC	9 cut(s)	145, 645, 649, 1160, 1984, 2059, 2278, 2480, 2594
BstMCI	CGRYCG	1 cut(s)	1006
BstNI	CCWGG	5 cut(s)	629, 680, 1804, 1872, 2465
BstNSI	RCATGY	3 cut(s)	1892, 2099, 3028
BstPAI	GACNNNNGTC	1 cut(s)	1081
BstPI	GGTNACC	1 cut(s)	841
BstSCI	CCNGG	8 cut(s)	627, 678, 1005, 1097, 1098, 1802, 1870, 2463
BstSFI	CTRYAG	3 cut(s)	918, 2607, 2834
BstV2I	GAAGAC	2 cut(s)	920, 1528
BstX2I	RGATCY	3 cut(s)	145, 1984, 2278
BstXI	CCANNNNNNTGG	1 cut(s)	21
BstYI	RGATCY	3 cut(s)	145, 1984, 2278
BstZ17I	GTATAC	2 cut(s)	546, 1665
BstZI	CGGCCG	1 cut(s)	1003
Bsu15I	ATCGAT	1 cut(s)	648
BsuRI	GGCC	5 cut(s)	432, 1005, 1153, 2346, 2463
BsuTUI	ATCGAT	1 cut(s)	648
BtrI	CACGTC	1 cut(s)	404
BtsCI	GGATG	8 cut(s)	352, 624, 1660, 1913, 2435, 2543, 2671, 2985
BtsI	GCAGTG	4 cut(s)	414, 1731, 2812, 2831
BveI	ACCTGC	3 cut(s)	155, 557, 571
Cac8I	GCNNGC	5 cut(s)	15, 1039, 1495, 2097, 2184
CaiI	CAGNNNCTG	1 cut(s)	2618
CciI	TCATGA	2 cut(s)	610, 730
CfoI	GCGC	2 cut(s)	2182, 2623
Cfr10I	RCCGGY	1 cut(s)	2915
Cfr13I	GGNCC	9 cut(s)	805, 1270, 1468, 1594, 1788, 2384, 2461, 2492, 2747
Cfr9I	CCCGGG	1 cut(s)	1098
ClaI	ATCGAT	1 cut(s)	648
CseI	GACGC	1 cut(s)	2723
Csp6I	GTAC	3 cut(s)	1176, 2216, 2868
CviAII	CATG	9 cut(s)	236, 434, 611, 731, 1889, 2096, 2274, 2348, 3025
CviQI	GTAC	3 cut(s)	1176, 2216, 2868
DdeI	CTNAG	8 cut(s)	516, 1050, 1344, 1905, 1968, 2407, 2692, 2888
DpnI	GATC	9 cut(s)	147, 647, 651, 1162, 1986, 2061, 2280, 2482, 2596
DpnII	GATC	9 cut(s)	145, 645, 649, 1160, 1984, 2059, 2278, 2480, 2594
DraI	TTTAAA	3 cut(s)	508, 1233, 1884
DrdI	GACNNNNNNGTC	1 cut(s)	1339
DseDI	GACNNNNNNGTC	1 cut(s)	1339
EaeI	YGGCCR	3 cut(s)	1003, 1151, 2344
EagI	CGGCCG	1 cut(s)	1003
Eam1104I	CTCTTC	7 cut(s)	93, 516, 1183, 2571, 2805, 2929, 3026
EarI	CTCTTC	7 cut(s)	93, 516, 1183, 2571, 2805, 2929, 3026
EciI	GGCGGA	2 cut(s)	208, 1308
Ecl136II	GAGCTC	2 cut(s)	1614, 1911
EclXI	CGGCCG	1 cut(s)	1003
Eco130I	CCWWGG	2 cut(s)	2387, 2750
Eco24I	GRGCYC	2 cut(s)	1616, 1913
Eco31I	GGTCTC	1 cut(s)	2933
Eco32I	GATATC	1 cut(s)	2077
Eco47I	GGWCC	8 cut(s)	805, 1270, 1468, 1594, 1788, 2384, 2492, 2747
Eco47III	AGCGCT	1 cut(s)	2181
Eco52I	CGGCCG	1 cut(s)	1003
Eco53kI	GAGCTC	2 cut(s)	1614, 1911
Eco57I	CTGAAG	9 cut(s)	870, 1232, 1535, 1619, 2256, 2336, 2421, 2568, 2784
Eco88I	CYCGRG	1 cut(s)	1098
Eco91I	GGTNACC	1 cut(s)	841
EcoICRI	GAGCTC	2 cut(s)	1614, 1911
EcoNI	CCTNNNNNAGG	1 cut(s)	2318
EcoO109I	RGGNCCY	4 cut(s)	805, 1270, 1788, 2747
EcoO65I	GGTNACC	1 cut(s)	841
EcoRII	CCWGG	5 cut(s)	627, 678, 1802, 1870, 2463
EcoRV	GATATC	1 cut(s)	2077
EcoT14I	CCWWGG	2 cut(s)	2387, 2750
EcoT38I	GRGCYC	2 cut(s)	1616, 1913
ErhI	CCWWGG	2 cut(s)	2387, 2750
FaeI	CATG	9 cut(s)	239, 437, 614, 734, 1892, 2099, 2277, 2351, 3028
FalI	AAGNNNNNCTT	4 cut(s)	1124, 1156, 1592, 1624
FaqI	GGGAC	3 cut(s)	193, 370, 1256
FatI	CATG	9 cut(s)	235, 433, 610, 730, 1888, 2095, 2273, 2347, 3024
FblI	GTMKAC	3 cut(s)	545, 1664, 2130
FokI	GGATG	8 cut(s)	359, 611, 1667, 1900, 2422, 2530, 2678, 2992
FriOI	GRGCYC	2 cut(s)	1616, 1913
FspBI	CTAG	9 cut(s)	84, 126, 383, 1065, 1283, 1494, 1931, 2700, 3052
GlaI	GCGC	2 cut(s)	2181, 2622
GsaI	CCCAGC	1 cut(s)	357
HaeII	RGCGCY	1 cut(s)	2183
HaeIII	GGCC	5 cut(s)	432, 1005, 1153, 2346, 2463
HapII	CCGG	4 cut(s)	1006, 1099, 2663, 2916
HgaI	GACGC	1 cut(s)	2723
HhaI	GCGC	2 cut(s)	2182, 2623
Hin1II	CATG	9 cut(s)	239, 437, 614, 734, 1892, 2099, 2277, 2351, 3028
Hin6I	GCGC	2 cut(s)	2180, 2621
HinP1I	GCGC	2 cut(s)	2180, 2621
HincII	GTYRAC	2 cut(s)	1086, 2658
HindII	GTYRAC	2 cut(s)	1086, 2658
HindIII	AAGCTT	4 cut(s)	92, 138, 770, 2511
HpaI	GTTAAC	1 cut(s)	2658
HpaII	CCGG	4 cut(s)	1006, 1099, 2663, 2916
HphI	GGTGA	7 cut(s)	806, 917, 938, 1021, 1421, 2442, 2792
Hpy166II	GTNNAC	8 cut(s)	546, 929, 1086, 1665, 1998, 2131, 2367, 2658
Hpy8I	GTNNAC	8 cut(s)	546, 929, 1086, 1665, 1998, 2131, 2367, 2658
HpyCH4III	ACNGT	9 cut(s)	376, 888, 905, 919, 977, 1370, 1566, 1839, 2296
HpyCH4IV	ACGT	2 cut(s)	387, 403
HpyF3I	CTNAG	8 cut(s)	516, 1050, 1344, 1905, 1968, 2407, 2692, 2888
HpySE526I	ACGT	2 cut(s)	387, 403
Hsp92II	CATG	9 cut(s)	239, 437, 614, 734, 1892, 2099, 2277, 2351, 3028
HspAI	GCGC	2 cut(s)	2180, 2621
KpnI	GGTACC	1 cut(s)	1179
KspAI	GTTAAC	1 cut(s)	2658
Kzo9I	GATC	9 cut(s)	145, 645, 649, 1160, 1984, 2059, 2278, 2480, 2594
LmnI	GCTCC	5 cut(s)	161, 662, 829, 1258, 2212
LweI	GCATC	5 cut(s)	1726, 2198, 2656, 2970, 2980
MaeI	CTAG	9 cut(s)	84, 126, 383, 1065, 1283, 1494, 1931, 2700, 3052
MaeII	ACGT	2 cut(s)	387, 403
MaeIII	GTNAC	8 cut(s)	841, 1009, 1535, 1876, 1946, 2230, 2448, 2911
MalI	GATC	9 cut(s)	147, 647, 651, 1162, 1986, 2061, 2280, 2482, 2596
MboI	GATC	9 cut(s)	145, 645, 649, 1160, 1984, 2059, 2278, 2480, 2594
MfeI	CAATTG	1 cut(s)	828
MflI	RGATCY	3 cut(s)	145, 1984, 2278
MhlI	GDGCHC	3 cut(s)	1255, 1616, 1913
MlsI	TGGCCA	2 cut(s)	1153, 2346
MluNI	TGGCCA	2 cut(s)	1153, 2346
MlyI	GAGTC	4 cut(s)	446, 791, 1327, 2126
MmeI	TCCRAC	4 cut(s)	1161, 1530, 2499, 2925
Mox20I	TGGCCA	2 cut(s)	1153, 2346
MscI	TGGCCA	2 cut(s)	1153, 2346
MseI	TTAA	9 cut(s)	369, 461, 507, 1232, 1883, 2010, 2538, 2657, 2928
MslI	CAYNNNNRTG	2 cut(s)	615, 1407
Msp20I	TGGCCA	2 cut(s)	1153, 2346
MspA1I	CMGCKG	2 cut(s)	1049, 2642
MspI	CCGG	4 cut(s)	1006, 1099, 2663, 2916
MspR9I	CCNGG	8 cut(s)	629, 680, 1007, 1099, 1100, 1804, 1872, 2465
MunI	CAATTG	1 cut(s)	828
Mva1269I	GAATGC	1 cut(s)	2426
MvaI	CCWGG	5 cut(s)	629, 680, 1804, 1872, 2465
NciI	CCSGG	3 cut(s)	1007, 1099, 1100
NdeII	GATC	9 cut(s)	145, 645, 649, 1160, 1984, 2059, 2278, 2480, 2594
NheI	GCTAGC	1 cut(s)	1493
NlaIII	CATG	9 cut(s)	239, 437, 614, 734, 1892, 2099, 2277, 2351, 3028
NmuCI	GTSAC	3 cut(s)	1009, 1535, 2448
NspI	RCATGY	3 cut(s)	1892, 2099, 3028
OliI	CACNNNNGTG	1 cut(s)	1407
PaeI	GCATGC	1 cut(s)	2099
PagI	TCATGA	2 cut(s)	610, 730
PctI	GAATGC	1 cut(s)	2426
PfeI	GAWTC	6 cut(s)	257, 607, 788, 1145, 2374, 2816
PflMI	CCANNNNNTGG	3 cut(s)	1588, 2353, 2441
PfoI	TCCNGGA	2 cut(s)	627, 678
PleI	GAGTC	4 cut(s)	445, 790, 1327, 2126
PpsI	GAGTC	4 cut(s)	445, 790, 1327, 2126
PpuMI	RGGWCCY	4 cut(s)	805, 1270, 1788, 2747
PshAI	GACNNNNGTC	1 cut(s)	1081
Psp124BI	GAGCTC	2 cut(s)	1616, 1913
Psp5II	RGGWCCY	4 cut(s)	805, 1270, 1788, 2747
Psp6I	CCWGG	5 cut(s)	627, 678, 1802, 1870, 2463
PspEI	GGTNACC	1 cut(s)	841
PspFI	CCCAGC	1 cut(s)	353
PspGI	CCWGG	5 cut(s)	627, 678, 1802, 1870, 2463
PspPI	GGNCC	9 cut(s)	805, 1270, 1468, 1594, 1788, 2384, 2461, 2492, 2747
PspPPI	RGGWCCY	4 cut(s)	805, 1270, 1788, 2747
PstI	CTGCAG	2 cut(s)	2611, 2838
PstNI	CAGNNNCTG	1 cut(s)	2618
PsuI	RGATCY	3 cut(s)	145, 1984, 2278
PvuII	CAGCTG	2 cut(s)	1049, 2642
RsaI	GTAC	3 cut(s)	1177, 2217, 2869
RsaNI	GTAC	3 cut(s)	1176, 2216, 2868
RseI	CAYNNNNRTG	2 cut(s)	615, 1407
SacI	GAGCTC	2 cut(s)	1616, 1913
SaqAI	TTAA	9 cut(s)	369, 461, 507, 1232, 1883, 2010, 2538, 2657, 2928
Sau3AI	GATC	9 cut(s)	145, 645, 649, 1160, 1984, 2059, 2278, 2480, 2594
Sau96I	GGNCC	9 cut(s)	805, 1270, 1468, 1594, 1788, 2384, 2461, 2492, 2747
ScaI	AGTACT	1 cut(s)	2869
SchI	GAGTC	4 cut(s)	446, 791, 1327, 2126
ScrFI	CCNGG	8 cut(s)	629, 680, 1007, 1099, 1100, 1804, 1872, 2465
SduI	GDGCHC	3 cut(s)	1255, 1616, 1913
SfaNI	GCATC	5 cut(s)	1726, 2198, 2656, 2970, 2980
SfcI	CTRYAG	3 cut(s)	918, 2607, 2834
SinI	GGWCC	8 cut(s)	805, 1270, 1468, 1594, 1788, 2384, 2492, 2747
SmaI	CCCGGG	1 cut(s)	1100
SmiMI	CAYNNNNRTG	2 cut(s)	615, 1407
SmlI	CTYRAG	2 cut(s)	1609, 2052
SmoI	CTYRAG	2 cut(s)	1609, 2052
SpeI	ACTAGT	1 cut(s)	2699
SphI	GCATGC	1 cut(s)	2099
SsiI	CCGC	3 cut(s)	193, 1293, 1739
SspMI	CTAG	9 cut(s)	84, 126, 383, 1065, 1283, 1494, 1931, 2700, 3052
SstI	GAGCTC	2 cut(s)	1616, 1913
StyD4I	CCNGG	8 cut(s)	627, 678, 1005, 1097, 1098, 1802, 1870, 2463
StyI	CCWWGG	2 cut(s)	2387, 2750
TaaI	ACNGT	9 cut(s)	376, 888, 905, 919, 977, 1370, 1566, 1839, 2296
TaiI	ACGT	2 cut(s)	390, 406
TaqI	TCGA	5 cut(s)	648, 2135, 2483, 2590, 3001
TaqII	GACCGA	1 cut(s)	2509
TatI	WGTACW	1 cut(s)	2867
TfiI	GAWTC	6 cut(s)	257, 607, 788, 1145, 2374, 2816
Tru1I	TTAA	9 cut(s)	369, 461, 507, 1232, 1883, 2010, 2538, 2657, 2928
Tru9I	TTAA	9 cut(s)	369, 461, 507, 1232, 1883, 2010, 2538, 2657, 2928
TseFI	GTSAC	3 cut(s)	1009, 1535, 2448
Tsp45I	GTSAC	3 cut(s)	1009, 1535, 2448
TspGWI	ACGGA	2 cut(s)	675, 2493
TspMI	CCCGGG	1 cut(s)	1098
Van91I	CCANNNNNTGG	3 cut(s)	1588, 2353, 2441
VpaK11BI	GGWCC	8 cut(s)	805, 1270, 1468, 1594, 1788, 2384, 2492, 2747
XagI	CCTNNNNNAGG	1 cut(s)	2318
XceI	RCATGY	3 cut(s)	1892, 2099, 3028
XmaI	CCCGGG	1 cut(s)	1098
XmiI	GTMKAC	3 cut(s)	545, 1664, 2130
XspI	CTAG	9 cut(s)	84, 126, 383, 1065, 1283, 1494, 1931, 2700, 3052
ZrmI	AGTACT	1 cut(s)	2869

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.