pycom14g07290

Regulatory protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
OG0012041
Physical Location & Seq
Forward (+)
7351925 .. 7354371
2447 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1497 bp
ATGAGCAGCCTTGAAGAGTCTCTAAGATCTCTGTCCTTAGACTACTTGAATCTGCTCATCAATGGCCAAGCCTTCAGTGACGTCACCTTCAGCGTCGAGGGTCGTCTCGTCCACGCCCACAGGTGCATCCTGGCAGCCCGGAGCCTCTTCTTCCGGAAATTCTTTTGTGGGCCTGACCCACCGTTGGGTCTAGACCCCTCGGGGTCCAGGATGAGTCCCGGTGGCACATCGTCATCGTATCACCGGGGGTCAGGTAGTTCACCGCAGCAGCAGCAGGTGATACCGGTGAACTCGGTGGGGTACGAGGTGTTCTTGTTGCTGTTGCAGTTCTTGTACAGTGGACAGGTCTCGATAGTGCCTCAGAAACATGAGCCGAGGCCTAATTGTGGAGAGAGAGGGTGTTGGCACACGCATTGCACCTCCGCCGTTGATCTTGCCCTTGACACTCTTGCTGCCGCTAGATCCTTTGGCGTTGAACAACTTGCATTGCTCACTCAGAAGCAATTGGCTAGCATGGTGGAAAAGGCCTCCATTGACGATGTGATGAAAGTCCTATTAGCTTCCAGGAAACAAGACATGCATCAGCTTTGGACAACGTGCTCTCACCTTGTTGCCAAATCTGGCCTCCCACCAGAAGTCCTTGCCAAGCACCTCCCCATCGATATCGTGGCCAAAATCGAAGAGCTTCGTCTCAAATCCTCCATTGCCCGCCGTTCAATGATGCCTCATCACCACCATCATCACCACCATGACCTCGGGGCAGCTGCGGATCTTGAGGACCAGAAAATCCGTAGAATGAGGCGGGCATTGGACTCGTCAGATGTCGAACTTGTCAAGCTCATGGTAATGGGGGAAGGCCTAAATCTCGATGAGGCATTGGCATTACACTATGCAGTCGAAAATTGCAGCCGGGAAGTTGTGAAAGCGTTGCTAGAACTTGGTGCAGCTGATGTAAACTACCCGGCAGGGCCAGCCGGCAAAACCCCGCTTCACATTGCTTCCGAAATGGTGTCTCCGGACATGGTGGCAGTCCTACTCGATCACCACGCTGACCCAAATGTCCGAACGGTCGATGGGGTTACTCCTCTGGACGTACTCCGAACCCTAACTTCAGATTTTCTATTCAAGGGGGCTGTCCCGGGACTAACCCACATTGAACCTAACAAGCTCAGACTCTGCCTTGAGCTCGTACAGTCCGCTGCTCTTGTTCTTTCACGCGAGGAAGGCAACAGCAATGCAAACAACAATCCTAATTCTTCGAATTCTACGGCGATTTACCCACCACTAAGCGATGATCACCATAGCAGTGGCAGCAGTGGCAGCAACATTGGGAACCTTAACTTGGATTCTAGGTTGGTGTATCTGAATCTTGGAGCAGCTCATCAAATGGGGTCTAGAAATATGGAGGGCCATGATCATCAAGATCATGATCATCATCATAGGGCGCAAAGTGGTTGTGACCCATCAACAATGTACCACCACTCTCACGACTACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000151 GO:0001101 GO:0002218 GO:0002252 GO:0002253 GO:0002376 GO:0002682 GO:0002684 GO:0003002 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009605 GO:0009607 GO:0009617 GO:0009653 GO:0009682 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009791 GO:0009798 GO:0009838 GO:0009864 GO:0009867 GO:0009888 GO:0009908 GO:0009943 GO:0009944 GO:0009954 GO:0009955 GO:0009965 GO:0009987 GO:0010016 GO:0010022 GO:0010033 GO:0010073 GO:0010227 GO:0010254 GO:0010432 GO:0010433 GO:0010434 GO:0010498 GO:0010582 GO:0019005 GO:0019222 GO:0019538 GO:0019899 GO:0019941 GO:0022414 GO:0023052 GO:0030162 GO:0030163 GO:0031347 GO:0031349 GO:0031461 GO:0031625 GO:0032501 GO:0032502 GO:0032870 GO:0032991 GO:0042221 GO:0042742 GO:0043161 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044424 GO:0044464 GO:0045087 GO:0045088 GO:0045089 GO:0048366 GO:0048367 GO:0048437 GO:0048439 GO:0048507 GO:0048518 GO:0048583 GO:0048584 GO:0048608 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0050776 GO:0050778 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051246 GO:0051603 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0061458 GO:0065001 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0071704 GO:0080090 GO:0080134 GO:0090567 GO:0090698 GO:0098542 GO:0099402 GO:1901564 GO:1901565 GO:1901575 GO:1901700 GO:1901701 GO:1902494 GO:1905392 GO:1905393 GO:1990234
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
Ank_2 Ank_3 BTB DUF3420

Protein Analysis

499

Amino Acids

54.52

Weight (kDa)

6.21

Isoelectric Point (pI)

49.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BTB PF00651 19 - 57 1.4e-07 BTB/POZ domain
DUF3420 PF11900 208 - 267 3.8e-12 Domain of unknown function (DUF3420)
Ank_2 PF12796 272 - 355 1.8e-12 Ankyrin repeats (3 copies)
Ank_5 PF13857 327 - 365 1.3e-06 Ankyrin repeats (many copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012041)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41370 AT3G57130
fragaria_vesca FvH4_6g25090
malus_domestica MD12G1091100.v1.1 MD14G1083700.v1.1
prunus_persica Prupe.7G046800_v2.0.a1
pyrus_communis pycom12g07650 pycom14g07290
rosa_chinensis RchiOBHm_Chr2g0124891
rosa_laevigata RLG00000018831
rosa_multiflora Rmu_sc0005075.1_g000013
rosa_roxburghii Rroxscaffold_2G00119550
rosa_rugosa Rorug02G0253100
rosa_samantha Rh2AG312800 Rh2BG321000 Rh2CG302300 Rh2DG338400
rosa_wichuraiana Rw0G021780 Rw2G025260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 265
AasI GACNNNNNNGTC 1 cut(s) 1058
AatII GACGTC 1 cut(s) 84
Acc36I ACCTGC 1 cut(s) 265
AccII CGCG 1 cut(s) 1218
AccIII TCCGGA 2 cut(s) 153, 1015
AciI CCGC 8 cut(s) 263, 423, 456, 709, 767, 802, 986, 1197
AclWI GGATC 2 cut(s) 456, 777
AcoI YGGCCR 2 cut(s) 64, 669
AcsI RAATTY 2 cut(s) 158, 1261
AcuI CTGAAG 3 cut(s) 58, 73, 1095
AcyI GRCGYC 1 cut(s) 81
AfaI GTAC 5 cut(s) 302, 335, 1095, 1191, 1475
AfiI CCNNNNNNNGG 4 cut(s) 184, 185, 386, 1342
AgeI ACCGGT 1 cut(s) 283
AgsI TTSAA 6 cut(s) 14, 49, 476, 717, 1126, 1157
AjnI CCWGG 3 cut(s) 129, 206, 563
AjuI GAANNNNNNNTTGG 2 cut(s) 1325, 1357
AluBI AGCT 9 cut(s) 560, 586, 685, 764, 838, 947, 1168, 1186, 1379
AluI AGCT 9 cut(s) 560, 586, 685, 764, 838, 947, 1168, 1186, 1379
Alw21I GWGCWC 2 cut(s) 602, 1188
Alw26I GTCTC 5 cut(s) 24, 110, 352, 695, 1017
AlwI GGATC 2 cut(s) 456, 777
AlwNI CAGNNNCTG 1 cut(s) 1176
Ama87I CYCGRG 3 cut(s) 199, 755, 1138
Aor13HI TCCGGA 2 cut(s) 153, 1015
AoxI GGCC 9 cut(s) 64, 170, 377, 525, 622, 669, 856, 968, 1408
ApoI RAATTY 2 cut(s) 158, 1261
AsiGI ACCGGT 1 cut(s) 283
Asp700I GAANNNNTTC 1 cut(s) 684
AspLEI GCGC 1 cut(s) 1447
AspS9I GGNCC 5 cut(s) 170, 204, 778, 968, 1408
AsuC2I CCSGG 7 cut(s) 139, 219, 245, 911, 962, 1139, 1140
AsuII TTCGAA 1 cut(s) 1259
AsuNHI GCTAGC 1 cut(s) 509
AvaI CYCGRG 3 cut(s) 199, 755, 1138
AvaII GGWCC 2 cut(s) 204, 778
BalI TGGCCA 2 cut(s) 66, 671
BanII GRGCYC 1 cut(s) 1188
Bbv12I GWGCWC 2 cut(s) 602, 1188
BccI CCATC 4 cut(s) 665, 744, 1067, 1471
BceAI ACGGC 3 cut(s) 410, 696, 1284
BcgI CGANNNNNNTGC 2 cut(s) 795, 829
BciT130I CCWGG 3 cut(s) 131, 208, 565
BclI TGATCA 3 cut(s) 1294, 1414, 1429
BcnI CCSGG 7 cut(s) 139, 219, 245, 911, 962, 1139, 1140
BcoDI GTCTC 5 cut(s) 24, 110, 352, 695, 1017
BfaI CTAG 7 cut(s) 191, 459, 510, 932, 1350, 1395, 1495
BfuAI ACCTGC 1 cut(s) 265
BglII AGATCT 1 cut(s) 26
Bme18I GGWCC 2 cut(s) 204, 778
BmeT110I CYCGRG 3 cut(s) 199, 755, 1138
BmgT120I GGNCC 5 cut(s) 170, 204, 778, 968, 1408
BmiI GGNNCC 3 cut(s) 143, 205, 1334
BmsI GCATC 3 cut(s) 135, 589, 711
BmtI GCTAGC 1 cut(s) 513
Bpu14I TTCGAA 1 cut(s) 1259
BpuEI CTTGAG 2 cut(s) 794, 1202
BpuMI CCSGG 7 cut(s) 139, 219, 245, 911, 962, 1139, 1140
Bsa29I ATCGAT 1 cut(s) 660
BsaBI GATNNNNATC 2 cut(s) 1428, 1434
BsaHI GRCGYC 1 cut(s) 81
BsaI GGTCTC 1 cut(s) 352
BsaJI CCNNGG 5 cut(s) 198, 244, 374, 754, 1138
BsaWI WCCGGW 3 cut(s) 153, 283, 1015
Bsc4I CCNNNNNNNGG 4 cut(s) 184, 185, 386, 1342
Bse118I RCCGGY 2 cut(s) 283, 974
Bse3DI GCAATG 5 cut(s) 412, 485, 702, 993, 1240
Bse8I GATNNNNATC 2 cut(s) 1428, 1434
BseAI TCCGGA 2 cut(s) 153, 1015
BseBI CCWGG 3 cut(s) 131, 208, 565
BseCI ATCGAT 1 cut(s) 660
BseDI CCNNGG 5 cut(s) 198, 244, 374, 754, 1138
BseGI GGATG 2 cut(s) 126, 216
BseJI GATNNNNATC 2 cut(s) 1428, 1434
BseLI CCNNNNNNNGG 4 cut(s) 184, 185, 386, 1342
BseMI GCAATG 5 cut(s) 412, 485, 702, 993, 1240
BseMII CTCAG 3 cut(s) 374, 509, 1183
BseRI GAGGAG 1 cut(s) 1074
BsgI GTGCAG 1 cut(s) 963
Bsh1236I CGCG 1 cut(s) 1218
Bsh1285I CGRYCG 1 cut(s) 1071
BshFI GGCC 9 cut(s) 66, 172, 379, 527, 624, 671, 858, 970, 1410
BshTI ACCGGT 1 cut(s) 283
BshVI ATCGAT 1 cut(s) 660
BsiEI CGRYCG 1 cut(s) 1071
BsiHKAI GWGCWC 2 cut(s) 602, 1188
BsiHKCI CYCGRG 3 cut(s) 199, 755, 1138
BslFI GGGAC 3 cut(s) 201, 1121, 1155
BslI CCNNNNNNNGG 4 cut(s) 184, 185, 386, 1342
BsmAI GTCTC 5 cut(s) 24, 110, 352, 695, 1017
BsmBI CGTCTC 2 cut(s) 110, 695
BsmFI GGGAC 3 cut(s) 201, 1121, 1155
BsnI GGCC 9 cut(s) 66, 172, 379, 527, 624, 671, 858, 970, 1410
Bso31I GGTCTC 1 cut(s) 352
BsoBI CYCGRG 3 cut(s) 199, 755, 1138
Bsp119I TTCGAA 1 cut(s) 1259
Bsp1286I GDGCHC 2 cut(s) 602, 1188
Bsp13I TCCGGA 2 cut(s) 153, 1015
Bsp1407I TGTACA 1 cut(s) 333
Bsp143I GATC 9 cut(s) 26, 430, 461, 769, 1039, 1294, 1414, 1423, 1429
BspACI CCGC 8 cut(s) 263, 423, 456, 709, 767, 802, 986, 1197
BspANI GGCC 9 cut(s) 66, 172, 379, 527, 624, 671, 858, 970, 1410
BspCNI CTCAG 3 cut(s) 373, 508, 1182
BspDI ATCGAT 1 cut(s) 660
BspEI TCCGGA 2 cut(s) 153, 1015
BspFNI CGCG 1 cut(s) 1218
BspHI TCATGA 1 cut(s) 1426
BspLI GGNNCC 3 cut(s) 143, 205, 1334
BspMI ACCTGC 1 cut(s) 265
BspOI GCTAGC 1 cut(s) 513
BspPI GGATC 2 cut(s) 456, 777
BspQI GCTCTTC 1 cut(s) 675
BspT104I TTCGAA 1 cut(s) 1259
BspTNI GGTCTC 1 cut(s) 352
BsrDI GCAATG 5 cut(s) 412, 485, 702, 993, 1240
BsrFI RCCGGY 2 cut(s) 283, 974
BsrGI TGTACA 1 cut(s) 333
BssAI RCCGGY 2 cut(s) 283, 974
BssECI CCNNGG 5 cut(s) 198, 244, 374, 754, 1138
BssMI GATC 9 cut(s) 26, 430, 461, 769, 1039, 1294, 1414, 1423, 1429
BssNI GRCGYC 1 cut(s) 81
Bst2UI CCWGG 3 cut(s) 131, 208, 565
Bst4CI ACNGT 4 cut(s) 183, 338, 1069, 1194
Bst6I CTCTTC 3 cut(s) 9, 152, 675
BstACI GRCGYC 1 cut(s) 81
BstAUI TGTACA 1 cut(s) 333
BstBI TTCGAA 1 cut(s) 1259
BstC8I GCNNGC 5 cut(s) 511, 709, 804, 972, 976
BstDEI CTNAG 6 cut(s) 23, 37, 360, 495, 1169, 1286
BstF5I GGATG 2 cut(s) 126, 216
BstFNI CGCG 1 cut(s) 1218
BstHHI GCGC 1 cut(s) 1447
BstKTI GATC 9 cut(s) 29, 433, 464, 772, 1042, 1297, 1417, 1426, 1432
BstMAI GTCTC 5 cut(s) 24, 110, 352, 695, 1017
BstMBI GATC 9 cut(s) 26, 430, 461, 769, 1039, 1294, 1414, 1423, 1429
BstMCI CGRYCG 1 cut(s) 1071
BstMWI GCNNNNNNNGC 6 cut(s) 271, 971, 1224, 1311, 1317, 1320
BstNI CCWGG 3 cut(s) 131, 208, 565
BstNSI RCATGY 1 cut(s) 580
BstUI CGCG 1 cut(s) 1218
BstX2I RGATCY 3 cut(s) 26, 461, 769
BstXI CCANNNNNNTGG 1 cut(s) 1307
BstYI RGATCY 3 cut(s) 26, 461, 769
Bsu15I ATCGAT 1 cut(s) 660
BsuRI GGCC 9 cut(s) 66, 172, 379, 527, 624, 671, 858, 970, 1410
BsuTUI ATCGAT 1 cut(s) 660
BtgZI GCGATG 1 cut(s) 1305
BtsCI GGATG 2 cut(s) 126, 216
BtsI GCAGTG 2 cut(s) 1312, 1321
BtsIMutI CAGTG 4 cut(s) 82, 343, 1312, 1321
BveI ACCTGC 1 cut(s) 265
Cac8I GCNNGC 5 cut(s) 511, 709, 804, 972, 976
CaiI CAGNNNCTG 1 cut(s) 1176
CciI TCATGA 1 cut(s) 1426
CfoI GCGC 1 cut(s) 1447
Cfr10I RCCGGY 2 cut(s) 283, 974
Cfr13I GGNCC 5 cut(s) 170, 204, 778, 968, 1408
Cfr9I CCCGGG 1 cut(s) 1138
ClaI ATCGAT 1 cut(s) 660
CseI GACGC 1 cut(s) 82
Csp6I GTAC 5 cut(s) 301, 334, 1094, 1190, 1474
CspAI ACCGGT 1 cut(s) 283
CviAII CATG 8 cut(s) 368, 514, 577, 749, 841, 1021, 1412, 1427
CviQI GTAC 5 cut(s) 301, 334, 1094, 1190, 1474
DdeI CTNAG 6 cut(s) 23, 37, 360, 495, 1169, 1286
DpnI GATC 9 cut(s) 28, 432, 463, 771, 1041, 1296, 1416, 1425, 1431
DpnII GATC 9 cut(s) 26, 430, 461, 769, 1039, 1294, 1414, 1423, 1429
DrdI GACNNNNNNGTC 1 cut(s) 1058
DseDI GACNNNNNNGTC 1 cut(s) 1058
EaeI YGGCCR 2 cut(s) 64, 669
Eam1104I CTCTTC 3 cut(s) 9, 152, 675
EarI CTCTTC 3 cut(s) 9, 152, 675
EciI GGCGGA 1 cut(s) 412
Ecl136II GAGCTC 1 cut(s) 1186
Eco147I AGGCCT 3 cut(s) 379, 527, 858
Eco24I GRGCYC 1 cut(s) 1188
Eco31I GGTCTC 1 cut(s) 352
Eco32I GATATC 1 cut(s) 664
Eco47I GGWCC 2 cut(s) 204, 778
Eco53kI GAGCTC 1 cut(s) 1186
Eco57I CTGAAG 3 cut(s) 58, 73, 1095
Eco88I CYCGRG 3 cut(s) 199, 755, 1138
EcoICRI GAGCTC 1 cut(s) 1186
EcoRI GAATTC 1 cut(s) 1261
EcoRII CCWGG 3 cut(s) 129, 206, 563
EcoRV GATATC 1 cut(s) 664
EcoT22I ATGCAT 1 cut(s) 582
EcoT38I GRGCYC 1 cut(s) 1188
Esp3I CGTCTC 2 cut(s) 110, 695
FaeI CATG 8 cut(s) 371, 517, 580, 752, 844, 1024, 1415, 1430
FaqI GGGAC 3 cut(s) 201, 1121, 1155
FatI CATG 8 cut(s) 367, 513, 576, 748, 840, 1020, 1411, 1426
FauI CCCGC 3 cut(s) 716, 795, 993
FbaI TGATCA 3 cut(s) 1294, 1414, 1429
FokI GGATG 2 cut(s) 113, 223
FriOI GRGCYC 1 cut(s) 1188
FspBI CTAG 7 cut(s) 191, 459, 510, 932, 1350, 1395, 1495
GlaI GCGC 1 cut(s) 1446
HaeIII GGCC 9 cut(s) 66, 172, 379, 527, 624, 671, 858, 970, 1410
HgaI GACGC 1 cut(s) 82
HhaI GCGC 1 cut(s) 1447
Hin1I GRCGYC 1 cut(s) 81
Hin1II CATG 8 cut(s) 371, 517, 580, 752, 844, 1024, 1415, 1430
Hin6I GCGC 1 cut(s) 1445
HinP1I GCGC 1 cut(s) 1445
HinfI GANTC 7 cut(s) 17, 49, 214, 812, 1173, 1346, 1366
Hpy166II GTNNAC 5 cut(s) 112, 260, 289, 341, 955
Hpy188I TCNGA 9 cut(s) 363, 498, 820, 1003, 1064, 1100, 1114, 1172, 1365
Hpy8I GTNNAC 5 cut(s) 112, 260, 289, 341, 955
Hpy99I CGWCG 1 cut(s) 98
HpyAV CCTTC 4 cut(s) 82, 97, 848, 1217
HpyCH4III ACNGT 4 cut(s) 183, 338, 1069, 1194
HpyCH4IV ACGT 3 cut(s) 81, 596, 1092
HpyCH4V TGCA 9 cut(s) 126, 325, 417, 485, 580, 893, 906, 944, 1238
HpyF10VI GCNNNNNNNGC 6 cut(s) 271, 971, 1224, 1311, 1317, 1320
HpyF3I CTNAG 6 cut(s) 23, 37, 360, 495, 1169, 1286
HpySE526I ACGT 3 cut(s) 81, 596, 1092
Hsp92I GRCGYC 1 cut(s) 81
Hsp92II CATG 8 cut(s) 371, 517, 580, 752, 844, 1024, 1415, 1430
HspAI GCGC 1 cut(s) 1445
Kpn2I TCCGGA 2 cut(s) 153, 1015
KroI GCCGGC 1 cut(s) 974
KroNI GCCGGC 1 cut(s) 976
Ksp22I TGATCA 3 cut(s) 1294, 1414, 1429
Kzo9I GATC 9 cut(s) 26, 430, 461, 769, 1039, 1294, 1414, 1423, 1429
LguI GCTCTTC 1 cut(s) 675
LmnI GCTCC 2 cut(s) 141, 1373
LweI GCATC 3 cut(s) 135, 589, 711
MaeI CTAG 7 cut(s) 191, 459, 510, 932, 1350, 1395, 1495
MaeII ACGT 3 cut(s) 81, 596, 1092
MaeIII GTNAC 4 cut(s) 77, 82, 1078, 1457
MalI GATC 9 cut(s) 28, 432, 463, 771, 1041, 1296, 1416, 1425, 1431
MboI GATC 9 cut(s) 26, 430, 461, 769, 1039, 1294, 1414, 1423, 1429
MboII GAAGA 5 cut(s) 26, 139, 142, 692, 1248
MfeI CAATTG 1 cut(s) 503
MflI RGATCY 3 cut(s) 26, 461, 769
MhlI GDGCHC 2 cut(s) 602, 1188
MlsI TGGCCA 2 cut(s) 66, 671
MluCI AATT 6 cut(s) 158, 382, 503, 901, 1252, 1261
MluNI TGGCCA 2 cut(s) 66, 671
MlyI GAGTC 4 cut(s) 26, 223, 806, 1167
Mox20I TGGCCA 2 cut(s) 66, 671
Mph1103I ATGCAT 1 cut(s) 582
MroI TCCGGA 2 cut(s) 153, 1015
MroNI GCCGGC 1 cut(s) 974
MroXI GAANNNNTTC 1 cut(s) 684
MscI TGGCCA 2 cut(s) 66, 671
MseI TTAA 1 cut(s) 1338
MslI CAYNNNNRTG 3 cut(s) 747, 845, 1305
Msp20I TGGCCA 2 cut(s) 66, 671
MspA1I CMGCKG 3 cut(s) 764, 947, 1199
MunI CAATTG 1 cut(s) 503
MvaI CCWGG 3 cut(s) 131, 208, 565
MvnI CGCG 1 cut(s) 1218
MwoI GCNNNNNNNGC 6 cut(s) 271, 971, 1224, 1311, 1317, 1320
NaeI GCCGGC 1 cut(s) 976
NciI CCSGG 7 cut(s) 139, 219, 245, 911, 962, 1139, 1140
NdeII GATC 9 cut(s) 26, 430, 461, 769, 1039, 1294, 1414, 1423, 1429
NgoMIV GCCGGC 1 cut(s) 974
NheI GCTAGC 1 cut(s) 509
NlaIII CATG 8 cut(s) 371, 517, 580, 752, 844, 1024, 1415, 1430
NlaIV GGNNCC 3 cut(s) 143, 205, 1334
NmeAIII GCCGAG 1 cut(s) 399
NmuCI GTSAC 3 cut(s) 77, 82, 1457
NsiI ATGCAT 1 cut(s) 582
NspI RCATGY 1 cut(s) 580
NspV TTCGAA 1 cut(s) 1259
PagI TCATGA 1 cut(s) 1426
PaqCI CACCTGC 1 cut(s) 265
PceI AGGCCT 3 cut(s) 379, 527, 858
PciSI GCTCTTC 1 cut(s) 675
PdiI GCCGGC 1 cut(s) 976
PdmI GAANNNNTTC 1 cut(s) 684
PfeI GAWTC 3 cut(s) 49, 1346, 1366
PfoI TCCNGGA 2 cut(s) 206, 563
PinAI ACCGGT 1 cut(s) 283
PleI GAGTC 4 cut(s) 25, 222, 806, 1167
PpsI GAGTC 4 cut(s) 25, 222, 806, 1167
Psp124BI GAGCTC 1 cut(s) 1188
Psp6I CCWGG 3 cut(s) 129, 206, 563
PspGI CCWGG 3 cut(s) 129, 206, 563
PspN4I GGNNCC 3 cut(s) 143, 205, 1334
PspPI GGNCC 5 cut(s) 170, 204, 778, 968, 1408
PsrI GAACNNNNNNTAC 2 cut(s) 293, 325
PstNI CAGNNNCTG 1 cut(s) 1176
PsuI RGATCY 3 cut(s) 26, 461, 769
PvuII CAGCTG 2 cut(s) 764, 947
RsaI GTAC 5 cut(s) 302, 335, 1095, 1191, 1475
RsaNI GTAC 5 cut(s) 301, 334, 1094, 1190, 1474
RseI CAYNNNNRTG 3 cut(s) 747, 845, 1305
SacI GAGCTC 1 cut(s) 1188
SapI GCTCTTC 1 cut(s) 675
SaqAI TTAA 1 cut(s) 1338
Sau3AI GATC 9 cut(s) 26, 430, 461, 769, 1039, 1294, 1414, 1423, 1429
Sau96I GGNCC 5 cut(s) 170, 204, 778, 968, 1408
SchI GAGTC 4 cut(s) 26, 223, 806, 1167
SduI GDGCHC 2 cut(s) 602, 1188
SfaNI GCATC 3 cut(s) 135, 589, 711
SfuI TTCGAA 1 cut(s) 1259
SinI GGWCC 2 cut(s) 204, 778
SmaI CCCGGG 1 cut(s) 1140
SmiMI CAYNNNNRTG 3 cut(s) 747, 845, 1305
SmlI CTYRAG 2 cut(s) 773, 1181
SmoI CTYRAG 2 cut(s) 773, 1181
Sse9I AATT 6 cut(s) 158, 382, 503, 901, 1252, 1261
SseBI AGGCCT 3 cut(s) 379, 527, 858
SsiI CCGC 8 cut(s) 263, 423, 456, 709, 767, 802, 986, 1197
SspMI CTAG 7 cut(s) 191, 459, 510, 932, 1350, 1395, 1495
SstI GAGCTC 1 cut(s) 1188
StuI AGGCCT 3 cut(s) 379, 527, 858
TaaI ACNGT 4 cut(s) 183, 338, 1069, 1194
TaiI ACGT 3 cut(s) 84, 599, 1095
TasI AATT 6 cut(s) 158, 382, 503, 901, 1252, 1261
TatI WGTACW 1 cut(s) 333
TauI GCSGC 1 cut(s) 458
TfiI GAWTC 3 cut(s) 49, 1346, 1366
Tru1I TTAA 1 cut(s) 1338
Tru9I TTAA 1 cut(s) 1338
TscAI CASTG 4 cut(s) 82, 343, 1312, 1321
TseFI GTSAC 3 cut(s) 77, 82, 1457
Tsp45I GTSAC 3 cut(s) 77, 82, 1457
TspDTI ATGAA 1 cut(s) 560
TspGWI ACGGA 1 cut(s) 779
TspMI CCCGGG 1 cut(s) 1138
TspRI CASTG 4 cut(s) 82, 343, 1312, 1321
VpaK11BI GGWCC 2 cut(s) 204, 778
XapI RAATTY 2 cut(s) 158, 1261
XbaI TCTAGA 2 cut(s) 190, 1394
XceI RCATGY 1 cut(s) 580
XcmI CCANNNNNNNNNTGG 1 cut(s) 664
XmaI CCCGGG 1 cut(s) 1138
XmnI GAANNNNTTC 1 cut(s) 684
XspI CTAG 7 cut(s) 191, 459, 510, 932, 1350, 1395, 1495
ZraI GACGTC 1 cut(s) 82
Zsp2I ATGCAT 1 cut(s) 582
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.