pycom14g10660
ERF Family

PIN2 TERF1-interacting telomerase inhibitor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
OG0011435
Physical Location & Seq
Forward (+)
13392206 .. 13394998
2793 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 969 bp
ATGTGTTCATTCTTAGTAACAAACAAAAAATGGGATAAAGCAAGCACTGGCTCCAAAAACCCACAAAAACAAGAAGTCGGTGACCCAAAACGACGTCGCATCTTGTACCAAACACTGTACGGCCCCTCGGTCCCGCTATTAGGTTTGGAGCCTCCGCTCTGCAGCTTCCTTTTTTCTTTACTCCTCGACCTCCGGAACAAAAACAGAGACGGCTGCAGGTCGTGTCTGGGAGGTCGCCGGAGTCAGAGGAGCAAAACCCTAACCATGGCCTCCCCCGAAGCCCCTCTCTGTTACGTCGGCGTCGCTAGAAAATCCGCCGCTTTCCGCCTTATGAAACAAATGGGATGGGAAGAAGGAGAAGGTCTTGGGAAAGACAAGCAGGGGATCAAAGGTTATGTCAGAGTCAAGAACAAGCAGGACACTACTGGTGTTGGTGTGGAGAAGCCTAACCAATGGGCATTCGATACGACCCAATTCGATAGTATCCTCAAAAGATTGAAAGTTCAAGCAGCGCAACCCAGCGATGAAGTTGCTGAGCCGAACGCCACTCAAGAGGAAAGTGATACTGAATTGCCTAGTGATGTTAAGGAACCTGTTGCCAAGGCTACTCGCCCACAGGGAAGATATAAGAAAAGAGAACGAGGAAAGCTTGTCAATGCTTATTCTTCTAAGGATATTGAAGGAATTCTTGTCAGAAGGGCGGCGTCTCCTGAGATTAATTTCGATCTGGATGGAGAAGTAGGGTCAGACAAGGCATCTGAAATTCAAGTTATATTCCCTGAAGGAGAAGTACGCAAAGAAATTCCTCTAGATTGGTGGGGCCATAAATATGGGTTTATTCGCGGAGGTTTGCTTGGAGCAGAGATGAAAAGAAGAAAATTAGAAATGTCTCAAAATGGTAATGAGAGAAAAATGTTTCACGAGGATTATCGTCGATCAAGTAAATCTTTACAATCTTGTTCAGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000070 GO:0000228 GO:0000278 GO:0000280 GO:0000723 GO:0000775 GO:0000776 GO:0000781 GO:0000784 GO:0000819 GO:0003674 GO:0003676 GO:0003723 GO:0004857 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0005819 GO:0005856 GO:0006139 GO:0006259 GO:0006278 GO:0006725 GO:0006807 GO:0006996 GO:0007004 GO:0007049 GO:0007059 GO:0007080 GO:0007346 GO:0008104 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010389 GO:0010521 GO:0010556 GO:0010558 GO:0010564 GO:0010605 GO:0010639 GO:0010833 GO:0010948 GO:0010972 GO:0015630 GO:0016043 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0022402 GO:0030234 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031396 GO:0031397 GO:0031399 GO:0031400 GO:0031647 GO:0031974 GO:0031981 GO:0032200 GO:0032204 GO:0032205 GO:0032210 GO:0032211 GO:0032268 GO:0032269 GO:0032879 GO:0032880 GO:0032991 GO:0033036 GO:0033043 GO:0033044 GO:0033365 GO:0034502 GO:0034504 GO:0034613 GO:0034641 GO:0034645 GO:0034654 GO:0042592 GO:0043086 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043388 GO:0044092 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044446 GO:0044454 GO:0044464 GO:0044877 GO:0045786 GO:0045930 GO:0045934 GO:0046483 GO:0048285 GO:0048518 GO:0048519 GO:0048523 GO:0050000 GO:0050789 GO:0050790 GO:0050794 GO:0051052 GO:0051053 GO:0051098 GO:0051099 GO:0051101 GO:0051128 GO:0051129 GO:0051171 GO:0051172 GO:0051179 GO:0051234 GO:0051246 GO:0051248 GO:0051276 GO:0051303 GO:0051310 GO:0051338 GO:0051348 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0051726 GO:0051972 GO:0051974 GO:0060249 GO:0060255 GO:0060341 GO:0065007 GO:0065008 GO:0065009 GO:0070013 GO:0070034 GO:0070198 GO:0070727 GO:0071704 GO:0071840 GO:0071897 GO:0080090 GO:0090304 GO:0097159 GO:0098687 GO:0098772 GO:0098813 GO:0140014 GO:1900180 GO:1900182 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1901987 GO:1901988 GO:1901990 GO:1901991 GO:1902570 GO:1902749 GO:1902750 GO:1903047 GO:1903320 GO:1903321 GO:1903827 GO:1903829 GO:1904356 GO:1904357 GO:1904742 GO:1904744 GO:1904749 GO:1904751 GO:2000112 GO:2000113 GO:2000278 GO:2000279 GO:2001251
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
G-patch

Protein Analysis

323

Amino Acids

36.21

Weight (kDa)

9.5

Isoelectric Point (pI)

60.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
G-patch PF01585 104 - 147 3.4e-15 G-patch domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011435)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G63980 AT1G63980
fragaria_vesca FvH4_5g03190 FvH4_5g03190
malus_domestica MD06G1091000.v1.1 MD14G1111900.v1.1
prunus_persica Prupe.5G106500_v2.0.a1
pyrus_communis pycom06g08660 pycom14g10660
rosa_chinensis RchiOBHm_Chr7g0196591
rosa_laevigata RLG00000004004
rosa_multiflora Rmu_sc0006080.1_g000003
rosa_roxburghii Rroxscaffold_3G00259180
rosa_rugosa Rorug07G0035000 Rorug07G0035100
rosa_samantha Rh7AG159000 Rh7BG161000 Rh7CG167400 Rh7DG160200
rosa_wichuraiana Rw7G013900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 97
Acc36I ACCTGC 1 cut(s) 207
AccBSI CCGCTC 1 cut(s) 157
AccII CGCG 1 cut(s) 843
AccIII TCCGGA 1 cut(s) 192
AciI CCGC 7 cut(s) 134, 155, 315, 318, 325, 701, 843
AclWI GGATC 1 cut(s) 392
AcsI RAATTY 3 cut(s) 684, 762, 801
AcuI CTGAAG 1 cut(s) 801
AcyI GRCGYC 3 cut(s) 94, 300, 704
AfaI GTAC 3 cut(s) 107, 119, 792
AfiI CCNNNNNNNGG 2 cut(s) 140, 265
AgsI TTSAA 4 cut(s) 499, 506, 680, 767
AluBI AGCT 2 cut(s) 165, 649
AluI AGCT 2 cut(s) 165, 649
Alw26I GTCTC 3 cut(s) 201, 711, 894
AlwI GGATC 1 cut(s) 392
Aor13HI TCCGGA 1 cut(s) 192
AoxI GGCC 3 cut(s) 121, 267, 820
ApeKI GCWGC 3 cut(s) 162, 213, 509
ApoI RAATTY 3 cut(s) 684, 762, 801
ArsI GACNNNNNNTTYG 2 cut(s) 381, 413
AseI ATTAAT 1 cut(s) 717
Asp700I GAANNNNTTC 1 cut(s) 684
AspLEI GCGC 1 cut(s) 514
AspS9I GGNCC 3 cut(s) 122, 130, 820
AsuHPI GGTGA 1 cut(s) 92
AvaII GGWCC 1 cut(s) 130
BarI GAAGNNNNNNTAC 2 cut(s) 774, 806
BauI CACGAG 1 cut(s) 920
BbvI GCAGC 3 cut(s) 174, 200, 521
BccI CCATC 2 cut(s) 339, 725
BceAI ACGGC 2 cut(s) 136, 226
BcgI CGANNNNNNTGC 2 cut(s) 512, 546
BciVI GTATCC 1 cut(s) 494
BcoDI GTCTC 3 cut(s) 201, 711, 894
BfaI CTAG 3 cut(s) 306, 576, 809
BfmI CTRYAG 2 cut(s) 160, 214
BfuAI ACCTGC 1 cut(s) 207
BfuI GTATCC 1 cut(s) 494
BisI GCNGC 5 cut(s) 163, 214, 318, 510, 702
BlpI GCTNAGC 1 cut(s) 534
BlsI GCNGC 5 cut(s) 164, 215, 319, 511, 703
Bme18I GGWCC 1 cut(s) 130
BmgT120I GGNCC 3 cut(s) 122, 130, 820
BmiI GGNNCC 6 cut(s) 52, 124, 132, 150, 591, 821
BmsI GCATC 2 cut(s) 108, 764
Bpu1102I GCTNAGC 1 cut(s) 534
BpuEI CTTGAG 1 cut(s) 534
BsaHI GRCGYC 3 cut(s) 94, 300, 704
BsaJI CCNNGG 3 cut(s) 126, 264, 600
BsaWI WCCGGW 1 cut(s) 192
Bsc4I CCNNNNNNNGG 2 cut(s) 140, 265
Bse1I ACTGG 2 cut(s) 52, 430
BseAI TCCGGA 1 cut(s) 192
BseDI CCNNGG 3 cut(s) 126, 264, 600
BseGI GGATG 2 cut(s) 350, 736
BseLI CCNNNNNNNGG 2 cut(s) 140, 265
BseMII CTCAG 2 cut(s) 525, 702
BseNI ACTGG 2 cut(s) 52, 430
BseRI GAGGAG 2 cut(s) 173, 262
BseXI GCAGC 3 cut(s) 174, 200, 521
BseYI CCCAGC 1 cut(s) 518
Bsh1236I CGCG 1 cut(s) 843
BshFI GGCC 3 cut(s) 123, 269, 822
BsiSI CCGG 2 cut(s) 193, 238
BslFI GGGAC 1 cut(s) 116
BslI CCNNNNNNNGG 2 cut(s) 140, 265
BsmAI GTCTC 3 cut(s) 201, 711, 894
BsmBI CGTCTC 2 cut(s) 201, 711
BsmFI GGGAC 1 cut(s) 116
BsmI GAATGC 1 cut(s) 458
BsnI GGCC 3 cut(s) 123, 269, 822
Bsp13I TCCGGA 1 cut(s) 192
Bsp143I GATC 3 cut(s) 384, 724, 935
Bsp1720I GCTNAGC 1 cut(s) 534
Bsp19I CCATGG 1 cut(s) 264
BspACI CCGC 7 cut(s) 134, 155, 315, 318, 325, 701, 843
BspANI GGCC 3 cut(s) 123, 269, 822
BspCNI CTCAG 2 cut(s) 526, 703
BspEI TCCGGA 1 cut(s) 192
BspFNI CGCG 1 cut(s) 843
BspLI GGNNCC 6 cut(s) 52, 124, 132, 150, 591, 821
BspMAI CTGCAG 2 cut(s) 164, 218
BspMI ACCTGC 1 cut(s) 207
BspPI GGATC 1 cut(s) 392
BsrBI CCGCTC 1 cut(s) 157
BsrI ACTGG 2 cut(s) 52, 430
BssECI CCNNGG 3 cut(s) 126, 264, 600
BssMI GATC 3 cut(s) 384, 724, 935
BssNI GRCGYC 3 cut(s) 94, 300, 704
BssSI CACGAG 1 cut(s) 920
BssT1I CCWWGG 2 cut(s) 264, 600
Bst2BI CACGAG 1 cut(s) 920
Bst4CI ACNGT 1 cut(s) 117
BstACI GRCGYC 3 cut(s) 94, 300, 704
BstC8I GCNNGC 1 cut(s) 43
BstDEI CTNAG 4 cut(s) 13, 534, 669, 711
BstDSI CCRYGG 1 cut(s) 264
BstEII GGTNACC 1 cut(s) 80
BstF5I GGATG 2 cut(s) 350, 736
BstFNI CGCG 1 cut(s) 843
BstHHI GCGC 1 cut(s) 514
BstKTI GATC 3 cut(s) 387, 727, 938
BstMAI GTCTC 3 cut(s) 201, 711, 894
BstMBI GATC 3 cut(s) 384, 724, 935
BstPI GGTNACC 1 cut(s) 80
BstSFI CTRYAG 2 cut(s) 160, 214
BstUI CGCG 1 cut(s) 843
BstV1I GCAGC 3 cut(s) 174, 200, 521
BstXI CCANNNNNNTGG 1 cut(s) 830
BsuI GTATCC 1 cut(s) 494
BsuRI GGCC 3 cut(s) 123, 269, 822
BtgI CCRYGG 1 cut(s) 264
BtgZI GCGATG 1 cut(s) 537
BtsCI GGATG 2 cut(s) 350, 736
BtsIMutI CAGTG 2 cut(s) 45, 113
BveI ACCTGC 1 cut(s) 207
Cac8I GCNNGC 1 cut(s) 43
CfoI GCGC 1 cut(s) 514
Cfr13I GGNCC 3 cut(s) 122, 130, 820
CseI GACGC 2 cut(s) 289, 693
Csp6I GTAC 3 cut(s) 106, 118, 791
CviAII CATG 1 cut(s) 265
CviQI GTAC 3 cut(s) 106, 118, 791
DdeI CTNAG 4 cut(s) 13, 534, 669, 711
DpnI GATC 3 cut(s) 386, 726, 937
DpnII GATC 3 cut(s) 384, 724, 935
EciI GGCGGA 2 cut(s) 304, 314
Eco130I CCWWGG 2 cut(s) 264, 600
Eco47I GGWCC 1 cut(s) 130
Eco57I CTGAAG 1 cut(s) 801
Eco91I GGTNACC 1 cut(s) 80
EcoO65I GGTNACC 1 cut(s) 80
EcoRI GAATTC 1 cut(s) 684
EcoT14I CCWWGG 2 cut(s) 264, 600
ErhI CCWWGG 2 cut(s) 264, 600
Esp3I CGTCTC 2 cut(s) 201, 711
FaeI CATG 1 cut(s) 268
FaiI YATR 7 cut(s) 266, 332, 396, 627, 773, 825, 831
FalI AAGNNNNNCTT 4 cut(s) 672, 704, 931, 963
FaqI GGGAC 1 cut(s) 116
FatI CATG 1 cut(s) 264
FauI CCCGC 1 cut(s) 141
Fnu4HI GCNGC 5 cut(s) 163, 214, 318, 510, 702
FokI GGATG 2 cut(s) 357, 743
Fsp4HI GCNGC 5 cut(s) 163, 214, 318, 510, 702
FspBI CTAG 3 cut(s) 306, 576, 809
GlaI GCGC 1 cut(s) 513
GluI GCNGC 5 cut(s) 163, 214, 318, 510, 702
GsaI CCCAGC 1 cut(s) 522
HaeIII GGCC 3 cut(s) 123, 269, 822
HapII CCGG 2 cut(s) 193, 238
HgaI GACGC 2 cut(s) 289, 693
HhaI GCGC 1 cut(s) 514
Hin1I GRCGYC 3 cut(s) 94, 300, 704
Hin1II CATG 1 cut(s) 268
Hin6I GCGC 1 cut(s) 512
HinP1I GCGC 1 cut(s) 512
HindIII AAGCTT 1 cut(s) 647
HinfI GANTC 2 cut(s) 241, 402
HpaII CCGG 2 cut(s) 193, 238
HphI GGTGA 1 cut(s) 92
Hpy188I TCNGA 5 cut(s) 246, 401, 695, 748, 760
Hpy188III TCNNGA 8 cut(s) 193, 406, 551, 710, 728, 809, 920, 963
Hpy99I CGWCG 5 cut(s) 96, 99, 299, 305, 936
HpyAV CCTTC 5 cut(s) 347, 353, 674, 690, 776
HpyCH4III ACNGT 1 cut(s) 117
HpyCH4IV ACGT 2 cut(s) 94, 294
HpyCH4V TGCA 2 cut(s) 162, 216
HpyF3I CTNAG 4 cut(s) 13, 534, 669, 711
HpySE526I ACGT 2 cut(s) 94, 294
Hsp92I GRCGYC 3 cut(s) 94, 300, 704
Hsp92II CATG 1 cut(s) 268
HspAI GCGC 1 cut(s) 512
Kpn2I TCCGGA 1 cut(s) 192
Kzo9I GATC 3 cut(s) 384, 724, 935
LmnI GCTCC 4 cut(s) 56, 148, 249, 857
Lsp1109I GCAGC 3 cut(s) 174, 200, 521
LweI GCATC 2 cut(s) 108, 764
MaeI CTAG 3 cut(s) 306, 576, 809
MaeII ACGT 2 cut(s) 94, 294
MaeIII GTNAC 3 cut(s) 16, 80, 290
MalI GATC 3 cut(s) 386, 726, 937
MbiI CCGCTC 1 cut(s) 157
MboI GATC 3 cut(s) 384, 724, 935
MboII GAAGA 4 cut(s) 362, 633, 657, 885
MluCI AATT 7 cut(s) 473, 569, 684, 718, 762, 801, 878
MlyI GAGTC 2 cut(s) 250, 411
MroI TCCGGA 1 cut(s) 192
MroXI GAANNNNTTC 1 cut(s) 684
MseI TTAA 2 cut(s) 585, 717
MslI CAYNNNNRTG 1 cut(s) 828
MspI CCGG 2 cut(s) 193, 238
Mva1269I GAATGC 1 cut(s) 458
MvnI CGCG 1 cut(s) 843
NcoI CCATGG 1 cut(s) 264
NdeII GATC 3 cut(s) 384, 724, 935
NlaIII CATG 1 cut(s) 268
NlaIV GGNNCC 6 cut(s) 52, 124, 132, 150, 591, 821
NmuCI GTSAC 1 cut(s) 80
PctI GAATGC 1 cut(s) 458
PdmI GAANNNNTTC 1 cut(s) 684
PkrI GCNGC 5 cut(s) 164, 215, 319, 511, 703
PleI GAGTC 2 cut(s) 249, 410
PpsI GAGTC 2 cut(s) 249, 410
PshBI ATTAAT 1 cut(s) 717
PspEI GGTNACC 1 cut(s) 80
PspFI CCCAGC 1 cut(s) 518
PspN4I GGNNCC 6 cut(s) 52, 124, 132, 150, 591, 821
PspPI GGNCC 3 cut(s) 122, 130, 820
PstI CTGCAG 2 cut(s) 164, 218
RsaI GTAC 3 cut(s) 107, 119, 792
RsaNI GTAC 3 cut(s) 106, 118, 791
RseI CAYNNNNRTG 1 cut(s) 828
SaqAI TTAA 2 cut(s) 585, 717
SatI GCNGC 5 cut(s) 163, 214, 318, 510, 702
Sau3AI GATC 3 cut(s) 384, 724, 935
Sau96I GGNCC 3 cut(s) 122, 130, 820
SchI GAGTC 2 cut(s) 250, 411
SfaNI GCATC 2 cut(s) 108, 764
SfcI CTRYAG 2 cut(s) 160, 214
SinI GGWCC 1 cut(s) 130
SmiMI CAYNNNNRTG 1 cut(s) 828
SmlI CTYRAG 1 cut(s) 549
SmoI CTYRAG 1 cut(s) 549
Sse9I AATT 7 cut(s) 473, 569, 684, 718, 762, 801, 878
SsiI CCGC 7 cut(s) 134, 155, 315, 318, 325, 701, 843
SspMI CTAG 3 cut(s) 306, 576, 809
StyI CCWWGG 2 cut(s) 264, 600
TaaI ACNGT 1 cut(s) 117
TaiI ACGT 2 cut(s) 97, 297
TaqI TCGA 5 cut(s) 186, 462, 477, 723, 934
TaqII GACCGA 1 cut(s) 118
TasI AATT 7 cut(s) 473, 569, 684, 718, 762, 801, 878
TauI GCSGC 2 cut(s) 320, 704
Tru1I TTAA 2 cut(s) 585, 717
Tru9I TTAA 2 cut(s) 585, 717
TscAI CASTG 2 cut(s) 52, 120
TseFI GTSAC 1 cut(s) 80
TseI GCWGC 3 cut(s) 162, 213, 509
Tsp45I GTSAC 1 cut(s) 80
TspDTI ATGAA 3 cut(s) 347, 540, 881
TspRI CASTG 2 cut(s) 52, 120
VpaK11BI GGWCC 1 cut(s) 130
VspI ATTAAT 1 cut(s) 717
XapI RAATTY 3 cut(s) 684, 762, 801
XbaI TCTAGA 1 cut(s) 808
XmnI GAANNNNTTC 1 cut(s) 684
XspI CTAG 3 cut(s) 306, 576, 809
ZraI GACGTC 1 cut(s) 95
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.