Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

OG0003275

Physical Location & Seq

Genomic Coordinates Reverse (-)

13625606 .. 13628788

Gene Structure 3183 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom14g10840.7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2169 bp

ATGGGGAGCTATGGTGAAGAGCGTGAGGATCAATTTTATGATACCCGAGAGGACCTTTCTTCGGTTTCGGATTGGGGTTCAGATTGCTGTGAGGAGTTTAGTTCTGGTACTCCAGGTTTCTTAAGGTATGAGGAGGTGTGGGCTAACAACCTGGAAAGTGTTCATGAGCGCCGCCATAAGTTCCTGCAGTGGATGGGTGTAGATTTGGATTCGAATTCGATGACGACAGAAGACTCAGAAGATGTCTTTGTTGACAGAATTAAAATTATTGATAGAATTAGGGAAGATAGTGGGGTGGTGTTGAGAACTTGGGGATTGGAAGAGGCGTCTTGCTCAAGTCAGTCAACGGTGTCTTCTTTGTCAACTGAAGCGCGGGAATCACTAGGAAATGGTGTTTTGGATGATACACATTCCACACGTGCAATGAGGAATTTGAACGGCGGAATGACTGTCATTGTAAGTGAATTGGTTCAGGATGGAAGGCTTGGCAGATTAGGTCAAGCGGGGCTAAGTCAATTGGTTAATGGGGAAGTTCTCAGTGCACAGGCACCATCTCCTTTGATTCAGCAATTATTGCAGAGAGAAGTTGATAACGCTAGGTTCTTTCTTGATGCGAAGAAGAAAGTTAAAAGGGGATGGTTAAGGAAATTAGGAAATGGGATTTGCGTTGCTGATAAACATGAGGCTGCGTTGAGCCCCATCAGTCTTAAATCTGCGTCAGGGGTAGGGATGCAAAGAGTCCAAGTTCATCCAAGTAAAAAGCGGACCAAGGAATTATCTTCACTGTATGCTGGGCAACACTTCTCAGCTCACGAGGGTTCAATTTTGTCCATGAAGTTCAGTCTTGATGGGCAATACTTGGCCAGTGCTGGTGAAGATGGTGTCGTGAGAGTGTGGAAGGTGATTGAGGATGAGAGATTCAACCAATTTGATATCGCTTCTGATCCTTCTTCTCTGTACTTCAAGATGCATCCATTTTCCAAGTTAAACTCTCCAAATGTGAATAAAGAAAAACAGAGTAAGGCGCAGCAATTGGTGGGATCATCAGAGTCAGCTTGTGTCGTTTTCCCTCCAAAGATATTTCGCTTATTGGAGAAGCCTGTTCATGAGTTCTGGGGACACAGAGGGGAGGTCTTGGATCTCTCATGGGCAAAGAAAGGGTTTCTGCTGTCATCCTCTGTTGATAAGACAGTCCGTTTATGGCAAGTAGGATGCGACAGATGCCTAAGAGTCTTTTCTCACAGTAATTTTGTGACATGTGTTAATTTCAACCCTCTGGATGATAATTATTTCATCAGTGGTTCAATAGACGGAAAAGTTCGCATTTGGGAAATTATTCGTTGTCTGGTTATTGACTATATTGATGTTCGTGAGATAGTCACTGCTGTATCTTATCGTCCTGACGGAAAGGGAGGAATTGTGGGTTTGATGACTGGAAATTGCTGTGTCTATAACATCATAGATGACCATCTGGAATTGGATGCTCAGATAAACATACACGGCAAAAAGAAGTCACCTGGAAAAAGGATAACTGGCTTTCAGTTTTCTCCAAGCAACCCAAGCAAAGTTATGGTGACGTCTGCTGATTCAGTAGTCCGTATAATTTCTGGGAAAGATATCGTCTGCAAATATAGGGGTCTTCGAAATGGAGGAAACCATATGTCCGCCTCTTTTACCTCAGACGGAAAGCACATTGTCTCAGCAAGCGATGATTCAAATGTACGCATCTGGAACTTCAATAGCCAGGACACGACATCTTTGCGATCGAGGAACCTATGGTCTTGTGAGAGTTTCGTGTCCCACAACTCCATGATTGCTATACCTTGGAATGGTGTAAACAGCTTGCCGGGAACCCTTCCATCCCCCAGATTCATTGGGGATTTGCCGCGAAGCAGCCTTGATTATCCCCTAAAACATTACAATTTGGATGAGAAAGTAGAACAGAAGTCCTTGCCAAGGGGTACCGCAACTTGGCCCGAGGAGAAACTTGTAAACTCAAGTCCAGTACCCATTTCCCCAACGATGTGCAGATCCGAGTATAAGTTTTTGAAGAGTGCTTGCCATGGTATGTCTGGCTCTTCTCACATGTGGGGCCTTGTGATCGTCACCGCCAGCCTGGACGGACGGATTAGAACATACCACAATTACGGGTTACCTATTCGTCGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

723

Amino Acids

80.55

Weight (kDa)

7.57

Isoelectric Point (pI)

42.42

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003275)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g11420 FvH4_5g11420 FvH4_5g11420 FvH4_5g11420 FvH4_5g11420 FvH4_5g11420 FvH4_5g11420 FvH4_5g11420 FvH4_5g11420 FvH4_5g11420 FvH4_5g11420
malus_domestica	MD06G1113900.v1.1 MD14G1135100.v1.1
prunus_persica	Prupe.5G126700_v2.0.a1 Prupe.5G126700_v2.0.a1 Prupe.5G126700_v2.0.a1 Prupe.5G126700_v2.0.a1 Prupe.5G126700_v2.0.a1 Prupe.5G126700_v2.0.a1 Prupe.5G126700_v2.0.a1
pyrus_communis	pycom06g10640 pycom14g10840
rosa_chinensis	RchiOBHm_Chr7g0186451
rosa_laevigata	RLG00000004844
rosa_multiflora	Rmu_sc0000645.1_g000039
rosa_roxburghii	Rroxscaffold_3G00268130
rosa_rugosa	Rorug06G0474100 Rorug06G0474100 Rorug06G0474200 Rorug06G0474300 Rorug06G0474400
rosa_samantha	Rh7AG067000 Rh7BG082700 Rh7CG080900 Rh7DG081500
rosa_wichuraiana	Rw7G006790 Rw7G007020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1580
Acc65I	GGTACC	1 cut(s)	1961
AccB1I	GGYRCC	2 cut(s)	547, 1961
AccII	CGCG	2 cut(s)	373, 1888
AciI	CCGC	9 cut(s)	172, 373, 441, 503, 763, 1665, 1886, 1965, 2109
AclWI	GGATC	5 cut(s)	36, 938, 1048, 1146, 2025
AcoI	YGGCCR	1 cut(s)	861
AcsI	RAATTY	2 cut(s)	214, 430
AcuI	CTGAAG	1 cut(s)	387
AcvI	CACGTG	1 cut(s)	419
AcyI	GRCGYC	2 cut(s)	326, 1577
AfaI	GTAC	5 cut(s)	109, 959, 1722, 1963, 2007
AfiI	CCNNNNNNNGG	4 cut(s)	61, 1829, 1956, 1971
AflII	CTTAAG	1 cut(s)	121
AflIII	ACRYGT	3 cut(s)	416, 1256, 2085
AgsI	TTSAA	9 cut(s)	436, 822, 922, 964, 1270, 1305, 1716, 1738, 2050
AjnI	CCWGG	5 cut(s)	112, 150, 1516, 1743, 2115
AluBI	AGCT	4 cut(s)	9, 809, 1055, 1842
AluI	AGCT	4 cut(s)	9, 809, 1055, 1842
Alw21I	GWGCWC	1 cut(s)	544
Alw26I	GTCTC	1 cut(s)	1702
Alw44I	GTGCAC	1 cut(s)	540
AlwI	GGATC	5 cut(s)	36, 938, 1048, 1146, 2025
Ama87I	CYCGRG	2 cut(s)	45, 1976
AoxI	GGCC	3 cut(s)	861, 1973, 2092
ApaLI	GTGCAC	1 cut(s)	540
ApeKI	GCWGC	3 cut(s)	686, 1027, 1893
ApoI	RAATTY	2 cut(s)	214, 430
Asp700I	GAANNNNTTC	3 cut(s)	159, 468, 1335
Asp718I	GGTACC	1 cut(s)	1961
AspLEI	GCGC	3 cut(s)	171, 373, 1027
AspS9I	GGNCC	4 cut(s)	52, 765, 1974, 2092
AsuC2I	CCSGG	1 cut(s)	1848
AsuHPI	GGTGA	6 cut(s)	26, 884, 913, 1506, 1585, 2098
AsuII	TTCGAA	2 cut(s)	212, 1642
AvaI	CYCGRG	2 cut(s)	45, 1976
AvaII	GGWCC	2 cut(s)	52, 765
BaeGI	GKGCMC	1 cut(s)	544
BaeI	ACNNNNGTAYC	2 cut(s)	1371, 1404
BalI	TGGCCA	1 cut(s)	863
BanI	GGYRCC	2 cut(s)	547, 1961
BanII	GRGCYC	1 cut(s)	698
BauI	CACGAG	1 cut(s)	812
BbrPI	CACGTG	1 cut(s)	419
BbsI	GAAGAC	3 cut(s)	237, 345, 1631
Bbv12I	GWGCWC	1 cut(s)	544
BbvI	GCAGC	3 cut(s)	673, 1039, 1905
BccI	CCATC	9 cut(s)	187, 470, 559, 630, 707, 842, 872, 1476, 1867
BceAI	ACGGC	2 cut(s)	454, 1516
BcgI	CGANNNNNNTGC	2 cut(s)	1741, 1775
BciT130I	CCWGG	5 cut(s)	114, 152, 1518, 1745, 2117
BcnI	CCSGG	1 cut(s)	1848
BcoDI	GTCTC	1 cut(s)	1702
BfaI	CTAG	2 cut(s)	383, 597
BfmI	CTRYAG	1 cut(s)	185
BfoI	RGCGCY	1 cut(s)	172
BfrI	CTTAAG	1 cut(s)	121
BisI	GCNGC	5 cut(s)	172, 687, 1028, 1886, 1894
BlsI	GCNGC	5 cut(s)	173, 688, 1029, 1887, 1895
Bme1390I	CCNGG	6 cut(s)	114, 152, 1518, 1745, 1848, 2117
Bme18I	GGWCC	2 cut(s)	52, 765
BmeT110I	CYCGRG	2 cut(s)	45, 1976
BmgT120I	GGNCC	4 cut(s)	52, 765, 1974, 2092
BmiI	GGNNCC	5 cut(s)	549, 1772, 1852, 1963, 2093
BmrFI	CCNGG	6 cut(s)	114, 152, 1518, 1745, 1848, 2117
BmsI	GCATC	8 cut(s)	601, 720, 957, 979, 1202, 1211, 1471, 1734
BpiI	GAAGAC	3 cut(s)	237, 345, 1631
BpmI	CTGGAG	1 cut(s)	96
Bpu14I	TTCGAA	2 cut(s)	212, 1642
BpuEI	CTTGAG	2 cut(s)	319, 1981
BpuMI	CCSGG	1 cut(s)	1848
BsaAI	YACGTR	1 cut(s)	419
BsaBI	GATNNNNATC	1 cut(s)	1467
BsaHI	GRCGYC	2 cut(s)	326, 1577
BsaJI	CCNNGG	5 cut(s)	768, 1823, 1955, 1977, 2062
BsaXI	ACNNNNNCTCC	3 cut(s)	28, 1404, 1434
Bsc4I	CCNNNNNNNGG	4 cut(s)	61, 1829, 1956, 1971
Bse1I	ACTGG	4 cut(s)	864, 1438, 1537, 2003
Bse3DI	GCAATG	1 cut(s)	429
Bse8I	GATNNNNATC	1 cut(s)	1467
BseBI	CCWGG	5 cut(s)	114, 152, 1518, 1745, 2117
BseDI	CCNNGG	5 cut(s)	768, 1823, 1955, 1977, 2062
BseJI	GATNNNNATC	1 cut(s)	1467
BseLI	CCNNNNNNNGG	4 cut(s)	61, 1829, 1956, 1971
BseMI	GCAATG	1 cut(s)	429
BseMII	CTCAG	6 cut(s)	249, 550, 819, 1499, 1692, 1713
BseNI	ACTGG	4 cut(s)	864, 1438, 1537, 2003
BseRI	GAGGAG	3 cut(s)	107, 146, 1994
BseSI	GKGCMC	1 cut(s)	544
BseXI	GCAGC	3 cut(s)	673, 1039, 1905
BseYI	CCCAGC	1 cut(s)	791
BsgI	GTGCAG	1 cut(s)	2047
Bsh1236I	CGCG	2 cut(s)	373, 1888
Bsh1285I	CGRYCG	1 cut(s)	1766
BshFI	GGCC	3 cut(s)	863, 1975, 2094
BshNI	GGYRCC	2 cut(s)	547, 1961
BsiEI	CGRYCG	1 cut(s)	1766
BsiHKAI	GWGCWC	1 cut(s)	544
BsiHKCI	CYCGRG	2 cut(s)	45, 1976
BsiSI	CCGG	1 cut(s)	1847
BslFI	GGGAC	2 cut(s)	1131, 1783
BslI	CCNNNNNNNGG	4 cut(s)	61, 1829, 1956, 1971
BsmAI	GTCTC	1 cut(s)	1702
BsmFI	GGGAC	2 cut(s)	1131, 1783
BsnI	GGCC	3 cut(s)	863, 1975, 2094
BsoBI	CYCGRG	2 cut(s)	45, 1976
Bsp119I	TTCGAA	2 cut(s)	212, 1642
Bsp1286I	GDGCHC	2 cut(s)	544, 698
Bsp143I	GATC	7 cut(s)	28, 943, 1040, 1138, 1763, 2030, 2100
Bsp19I	CCATGG	1 cut(s)	2062
BspACI	CCGC	9 cut(s)	172, 373, 441, 503, 763, 1665, 1886, 1965, 2109
BspANI	GGCC	3 cut(s)	863, 1975, 2094
BspCNI	CTCAG	6 cut(s)	248, 549, 818, 1498, 1691, 1712
BspFNI	CGCG	2 cut(s)	373, 1888
BspHI	TCATGA	2 cut(s)	163, 1105
BspLI	GGNNCC	5 cut(s)	549, 1772, 1852, 1963, 2093
BspMAI	CTGCAG	1 cut(s)	189
BspPI	GGATC	5 cut(s)	36, 938, 1048, 1146, 2025
BspQI	GCTCTTC	2 cut(s)	12, 2083
BspT104I	TTCGAA	2 cut(s)	212, 1642
BspT107I	GGYRCC	2 cut(s)	547, 1961
BspTI	CTTAAG	1 cut(s)	121
BsrDI	GCAATG	1 cut(s)	429
BsrI	ACTGG	4 cut(s)	864, 1438, 1537, 2003
BssECI	CCNNGG	5 cut(s)	768, 1823, 1955, 1977, 2062
BssMI	GATC	7 cut(s)	28, 943, 1040, 1138, 1763, 2030, 2100
BssNI	GRCGYC	2 cut(s)	326, 1577
BssSI	CACGAG	1 cut(s)	812
BssT1I	CCWWGG	4 cut(s)	768, 1823, 1955, 2062
Bst2BI	CACGAG	1 cut(s)	812
Bst2UI	CCWGG	5 cut(s)	114, 152, 1518, 1745, 2117
Bst4CI	ACNGT	5 cut(s)	349, 451, 786, 1192, 1244
Bst6I	CTCTTC	4 cut(s)	12, 315, 2045, 2083
BstACI	GRCGYC	2 cut(s)	326, 1577
BstAFI	CTTAAG	1 cut(s)	121
BstAPI	GCANNNNNTGC	1 cut(s)	574
BstBAI	YACGTR	1 cut(s)	419
BstBI	TTCGAA	2 cut(s)	212, 1642
BstC8I	GCNNGC	4 cut(s)	1705, 1844, 2059, 2113
BstDEI	CTNAG	8 cut(s)	235, 509, 536, 805, 1226, 1485, 1678, 1699
BstDSI	CCRYGG	1 cut(s)	2062
BstEII	GGTNACC	1 cut(s)	2151
BstENI	CCTNNNNNAGG	1 cut(s)	1954
BstFNI	CGCG	2 cut(s)	373, 1888
BstH2I	RGCGCY	1 cut(s)	172
BstHHI	GCGC	3 cut(s)	171, 373, 1027
BstKTI	GATC	7 cut(s)	31, 946, 1043, 1141, 1766, 2033, 2103
BstMAI	GTCTC	1 cut(s)	1702
BstMBI	GATC	7 cut(s)	28, 943, 1040, 1138, 1763, 2030, 2100
BstMCI	CGRYCG	1 cut(s)	1766
BstMWI	GCNNNNNNNGC	3 cut(s)	574, 1221, 1560
BstNI	CCWGG	5 cut(s)	114, 152, 1518, 1745, 2117
BstNSI	RCATGY	2 cut(s)	1260, 2089
BstPI	GGTNACC	1 cut(s)	2151
BstSCI	CCNGG	6 cut(s)	112, 150, 1516, 1743, 1846, 2115
BstSFI	CTRYAG	1 cut(s)	185
BstSLI	GKGCMC	1 cut(s)	544
BstUI	CGCG	2 cut(s)	373, 1888
BstV1I	GCAGC	3 cut(s)	673, 1039, 1905
BstV2I	GAAGAC	3 cut(s)	237, 345, 1631
BstX2I	RGATCY	2 cut(s)	1138, 2030
BstYI	RGATCY	2 cut(s)	1138, 2030
BsuRI	GGCC	3 cut(s)	863, 1975, 2094
BtgI	CCRYGG	1 cut(s)	2062
BtgZI	GCGATG	1 cut(s)	1722
BtsI	GCAGTG	2 cut(s)	194, 1380
BtsIMutI	CAGTG	6 cut(s)	194, 544, 782, 871, 1303, 1380
Cac8I	GCNNGC	4 cut(s)	1705, 1844, 2059, 2113
CciI	TCATGA	2 cut(s)	163, 1105
CfoI	GCGC	3 cut(s)	171, 373, 1027
Cfr13I	GGNCC	4 cut(s)	52, 765, 1974, 2092
CseI	GACGC	2 cut(s)	315, 705
Csp6I	GTAC	5 cut(s)	108, 958, 1721, 1962, 2006
CviAII	CATG	9 cut(s)	164, 680, 832, 1106, 1146, 1257, 1810, 2063, 2086
CviQI	GTAC	5 cut(s)	108, 958, 1721, 1962, 2006
DdeI	CTNAG	8 cut(s)	235, 509, 536, 805, 1226, 1485, 1678, 1699
DpnI	GATC	7 cut(s)	30, 945, 1042, 1140, 1765, 2032, 2102
DpnII	GATC	7 cut(s)	28, 943, 1040, 1138, 1763, 2030, 2100
EaeI	YGGCCR	1 cut(s)	861
Eam1104I	CTCTTC	4 cut(s)	12, 315, 2045, 2083
EarI	CTCTTC	4 cut(s)	12, 315, 2045, 2083
EciI	GGCGGA	2 cut(s)	456, 1654
Eco130I	CCWWGG	4 cut(s)	768, 1823, 1955, 2062
Eco24I	GRGCYC	1 cut(s)	698
Eco32I	GATATC	2 cut(s)	934, 1618
Eco47I	GGWCC	2 cut(s)	52, 765
Eco57I	CTGAAG	1 cut(s)	387
Eco72I	CACGTG	1 cut(s)	419
Eco88I	CYCGRG	2 cut(s)	45, 1976
Eco91I	GGTNACC	1 cut(s)	2151
EcoNI	CCTNNNNNAGG	1 cut(s)	1954
EcoO109I	RGGNCCY	2 cut(s)	52, 2092
EcoO65I	GGTNACC	1 cut(s)	2151
EcoRI	GAATTC	1 cut(s)	214
EcoRII	CCWGG	5 cut(s)	112, 150, 1516, 1743, 2115
EcoRV	GATATC	2 cut(s)	934, 1618
EcoT14I	CCWWGG	4 cut(s)	768, 1823, 1955, 2062
EcoT22I	ATGCAT	1 cut(s)	972
EcoT38I	GRGCYC	1 cut(s)	698
ErhI	CCWWGG	4 cut(s)	768, 1823, 1955, 2062
FaeI	CATG	9 cut(s)	167, 683, 835, 1109, 1149, 1260, 1813, 2066, 2089
FaqI	GGGAC	2 cut(s)	1131, 1783
FatI	CATG	9 cut(s)	163, 679, 831, 1105, 1145, 1256, 1809, 2062, 2085
FauI	CCCGC	2 cut(s)	366, 496
FauNDI	CATATG	1 cut(s)	1659
Fnu4HI	GCNGC	5 cut(s)	172, 687, 1028, 1886, 1894
FriOI	GRGCYC	1 cut(s)	698
Fsp4HI	GCNGC	5 cut(s)	172, 687, 1028, 1886, 1894
FspBI	CTAG	2 cut(s)	383, 597
GlaI	GCGC	3 cut(s)	170, 372, 1026
GluI	GCNGC	5 cut(s)	172, 687, 1028, 1886, 1894
GsaI	CCCAGC	1 cut(s)	795
GsuI	CTGGAG	1 cut(s)	96
HaeII	RGCGCY	1 cut(s)	172
HaeIII	GGCC	3 cut(s)	863, 1975, 2094
HapII	CCGG	1 cut(s)	1847
HgaI	GACGC	2 cut(s)	315, 705
HhaI	GCGC	3 cut(s)	171, 373, 1027
Hin1I	GRCGYC	2 cut(s)	326, 1577
Hin1II	CATG	9 cut(s)	167, 683, 835, 1109, 1149, 1260, 1813, 2066, 2089
Hin6I	GCGC	3 cut(s)	169, 371, 1025
HinP1I	GCGC	3 cut(s)	169, 371, 1025
HincII	GTYRAC	3 cut(s)	253, 345, 363
HindII	GTYRAC	3 cut(s)	253, 345, 363
HpaII	CCGG	1 cut(s)	1847
HphI	GGTGA	6 cut(s)	26, 884, 913, 1506, 1585, 2098
Hpy166II	GTNNAC	6 cut(s)	253, 345, 363, 542, 1837, 1993
Hpy188I	TCNGA	8 cut(s)	70, 82, 238, 943, 1048, 1488, 1681, 2035
Hpy8I	GTNNAC	6 cut(s)	253, 345, 363, 542, 1837, 1993
Hpy99I	CGWCG	1 cut(s)	2166
HpyAV	CCTTC	4 cut(s)	474, 892, 957, 1865
HpyCH4III	ACNGT	5 cut(s)	349, 451, 786, 1192, 1244
HpyCH4IV	ACGT	2 cut(s)	418, 1577
HpyCH4V	TGCA	8 cut(s)	187, 422, 542, 577, 733, 970, 1626, 2028
HpyF10VI	GCNNNNNNNGC	3 cut(s)	574, 1221, 1560
HpyF3I	CTNAG	8 cut(s)	235, 509, 536, 805, 1226, 1485, 1678, 1699
HpySE526I	ACGT	2 cut(s)	418, 1577
Hsp92I	GRCGYC	2 cut(s)	326, 1577
Hsp92II	CATG	9 cut(s)	167, 683, 835, 1109, 1149, 1260, 1813, 2066, 2089
HspAI	GCGC	3 cut(s)	169, 371, 1025
KpnI	GGTACC	1 cut(s)	1965
Kzo9I	GATC	7 cut(s)	28, 943, 1040, 1138, 1763, 2030, 2100
LguI	GCTCTTC	2 cut(s)	12, 2083
LmnI	GCTCC	1 cut(s)	6
Lsp1109I	GCAGC	3 cut(s)	673, 1039, 1905
LweI	GCATC	8 cut(s)	601, 720, 957, 979, 1202, 1211, 1471, 1734
MaeI	CTAG	2 cut(s)	383, 597
MaeII	ACGT	2 cut(s)	418, 1577
MaeIII	GTNAC	6 cut(s)	1252, 1378, 1512, 1573, 2104, 2151
MalI	GATC	7 cut(s)	30, 945, 1042, 1140, 1765, 2032, 2102
MboI	GATC	7 cut(s)	28, 943, 1040, 1138, 1763, 2030, 2100
MfeI	CAATTG	2 cut(s)	515, 1031
MflI	RGATCY	2 cut(s)	1138, 2030
MhlI	GDGCHC	2 cut(s)	544, 698
MlsI	TGGCCA	1 cut(s)	863
MluNI	TGGCCA	1 cut(s)	863
MlyI	GAGTC	4 cut(s)	227, 747, 1058, 1239
Mox20I	TGGCCA	1 cut(s)	863
Mph1103I	ATGCAT	1 cut(s)	972
MroXI	GAANNNNTTC	3 cut(s)	159, 468, 1335
MscI	TGGCCA	1 cut(s)	863
MseI	TTAA	9 cut(s)	122, 261, 522, 627, 641, 708, 986, 1263, 2167
Msp20I	TGGCCA	1 cut(s)	863
MspCI	CTTAAG	1 cut(s)	121
MspI	CCGG	1 cut(s)	1847
MspR9I	CCNGG	6 cut(s)	114, 152, 1518, 1745, 1848, 2117
MunI	CAATTG	2 cut(s)	515, 1031
MvaI	CCWGG	5 cut(s)	114, 152, 1518, 1745, 2117
MvnI	CGCG	2 cut(s)	373, 1888
MwoI	GCNNNNNNNGC	3 cut(s)	574, 1221, 1560
NciI	CCSGG	1 cut(s)	1848
NcoI	CCATGG	1 cut(s)	2062
NdeI	CATATG	1 cut(s)	1659
NdeII	GATC	7 cut(s)	28, 943, 1040, 1138, 1763, 2030, 2100
NlaIII	CATG	9 cut(s)	167, 683, 835, 1109, 1149, 1260, 1813, 2066, 2089
NlaIV	GGNNCC	5 cut(s)	549, 1772, 1852, 1963, 2093
NmuCI	GTSAC	5 cut(s)	1252, 1378, 1512, 1573, 2104
NsiI	ATGCAT	1 cut(s)	972
NspI	RCATGY	2 cut(s)	1260, 2089
NspV	TTCGAA	2 cut(s)	212, 1642
PagI	TCATGA	2 cut(s)	163, 1105
PciI	ACATGT	2 cut(s)	1256, 2085
PciSI	GCTCTTC	2 cut(s)	12, 2083
PdmI	GAANNNNTTC	3 cut(s)	159, 468, 1335
PfeI	GAWTC	7 cut(s)	209, 377, 562, 918, 1586, 1712, 1869
PkrI	GCNGC	5 cut(s)	173, 688, 1029, 1887, 1895
Ple19I	CGATCG	1 cut(s)	1766
PleI	GAGTC	4 cut(s)	227, 746, 1057, 1238
PmaCI	CACGTG	1 cut(s)	419
PmlI	CACGTG	1 cut(s)	419
PpsI	GAGTC	4 cut(s)	227, 746, 1057, 1238
Ppu21I	YACGTR	1 cut(s)	419
PpuMI	RGGWCCY	1 cut(s)	52
PscI	ACATGT	2 cut(s)	1256, 2085
Psp5II	RGGWCCY	1 cut(s)	52
Psp6I	CCWGG	5 cut(s)	112, 150, 1516, 1743, 2115
PspCI	CACGTG	1 cut(s)	419
PspEI	GGTNACC	1 cut(s)	2151
PspFI	CCCAGC	1 cut(s)	791
PspGI	CCWGG	5 cut(s)	112, 150, 1516, 1743, 2115
PspN4I	GGNNCC	5 cut(s)	549, 1772, 1852, 1963, 2093
PspPI	GGNCC	4 cut(s)	52, 765, 1974, 2092
PspPPI	RGGWCCY	1 cut(s)	52
PstI	CTGCAG	1 cut(s)	189
PsuI	RGATCY	2 cut(s)	1138, 2030
PvuI	CGATCG	1 cut(s)	1766
RsaI	GTAC	5 cut(s)	109, 959, 1722, 1963, 2007
RsaNI	GTAC	5 cut(s)	108, 958, 1721, 1962, 2006
SapI	GCTCTTC	2 cut(s)	12, 2083
SaqAI	TTAA	9 cut(s)	122, 261, 522, 627, 641, 708, 986, 1263, 2167
SatI	GCNGC	5 cut(s)	172, 687, 1028, 1886, 1894
Sau3AI	GATC	7 cut(s)	28, 943, 1040, 1138, 1763, 2030, 2100
Sau96I	GGNCC	4 cut(s)	52, 765, 1974, 2092
SchI	GAGTC	4 cut(s)	227, 747, 1058, 1239
ScrFI	CCNGG	6 cut(s)	114, 152, 1518, 1745, 1848, 2117
SduI	GDGCHC	2 cut(s)	544, 698
SfaNI	GCATC	8 cut(s)	601, 720, 957, 979, 1202, 1211, 1471, 1734
SfcI	CTRYAG	1 cut(s)	185
SfuI	TTCGAA	2 cut(s)	212, 1642
SinI	GGWCC	2 cut(s)	52, 765
SmlI	CTYRAG	3 cut(s)	121, 334, 1996
SmoI	CTYRAG	3 cut(s)	121, 334, 1996
SsiI	CCGC	9 cut(s)	172, 373, 441, 503, 763, 1665, 1886, 1965, 2109
SspMI	CTAG	2 cut(s)	383, 597
StyD4I	CCNGG	6 cut(s)	112, 150, 1516, 1743, 1846, 2115
StyI	CCWWGG	4 cut(s)	768, 1823, 1955, 2062
TaaI	ACNGT	5 cut(s)	349, 451, 786, 1192, 1244
TaiI	ACGT	2 cut(s)	421, 1580
TaqI	TCGA	4 cut(s)	212, 218, 1642, 1766
TatI	WGTACW	1 cut(s)	957
TauI	GCSGC	2 cut(s)	174, 1888
TfiI	GAWTC	7 cut(s)	209, 377, 562, 918, 1586, 1712, 1869
Tru1I	TTAA	9 cut(s)	122, 261, 522, 627, 641, 708, 986, 1263, 2167
Tru9I	TTAA	9 cut(s)	122, 261, 522, 627, 641, 708, 986, 1263, 2167
TscAI	CASTG	6 cut(s)	194, 544, 789, 871, 1303, 1387
TseFI	GTSAC	5 cut(s)	1252, 1378, 1512, 1573, 2104
TseI	GCWGC	3 cut(s)	686, 1027, 1893
Tsp45I	GTSAC	5 cut(s)	1252, 1378, 1512, 1573, 2104
TspDTI	ATGAA	6 cut(s)	152, 737, 848, 1094, 1282, 1861
TspGWI	ACGGA	7 cut(s)	1184, 1326, 1419, 1586, 1698, 2136, 2140
TspRI	CASTG	6 cut(s)	194, 544, 789, 871, 1303, 1387
Vha464I	CTTAAG	1 cut(s)	121
VneI	GTGCAC	1 cut(s)	540
VpaK11BI	GGWCC	2 cut(s)	52, 765
XagI	CCTNNNNNAGG	1 cut(s)	1954
XapI	RAATTY	2 cut(s)	214, 430
XceI	RCATGY	2 cut(s)	1260, 2089
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2069
XmnI	GAANNNNTTC	3 cut(s)	159, 468, 1335
XspI	CTAG	2 cut(s)	383, 597
ZraI	GACGTC	1 cut(s)	1578
Zsp2I	ATGCAT	1 cut(s)	972

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.