Protein ROOT INITIATION DEFECTIVE 3-like
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g07940 |
| malus_domestica | MD06G1143900.v1.1 MD14G1159200.v1.1 |
| prunus_persica | Prupe.5G153000_v2.0.a1 Prupe.5G153000_v2.0.a1 |
| pyrus_communis | pycom06g13350 pycom14g13270 |
| rosa_chinensis | RchiOBHm_Chr7g0190461 |
| rosa_laevigata | RLG00000004530 |
| rosa_multiflora | Rmu_sc0002614.1_g000001 Rmu_sc0018407.1_g000001 Rmu_sc0036935.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00264600 |
| rosa_rugosa | Rorug06G0504700 |
| rosa_samantha | Rh7AG110800 Rh7BG113400 Rh7CG115600 Rh7DG113900 |
| rosa_wichuraiana | Rw7G009620 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 362 |
| AclWI | GGATC | 1 cut(s) | 279 |
| AcsI | RAATTY | 1 cut(s) | 381 |
| AcuI | CTGAAG | 1 cut(s) | 456 |
| AgsI | TTSAA | 2 cut(s) | 143, 171 |
| AjnI | CCWGG | 1 cut(s) | 313 |
| AluBI | AGCT | 3 cut(s) | 39, 147, 243 |
| AluI | AGCT | 3 cut(s) | 39, 147, 243 |
| AlwI | GGATC | 1 cut(s) | 279 |
| Aor13HI | TCCGGA | 1 cut(s) | 362 |
| ApoI | RAATTY | 1 cut(s) | 381 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 147 |
| AsuHPI | GGTGA | 2 cut(s) | 147, 438 |
| BccI | CCATC | 3 cut(s) | 53, 83, 245 |
| BciT130I | CCWGG | 1 cut(s) | 315 |
| BfaI | CTAG | 2 cut(s) | 222, 275 |
| BfmI | CTRYAG | 1 cut(s) | 324 |
| Bme1390I | CCNGG | 1 cut(s) | 315 |
| BmrFI | CCNGG | 1 cut(s) | 315 |
| BmsI | GCATC | 1 cut(s) | 225 |
| BpuEI | CTTGAG | 1 cut(s) | 285 |
| BsaJI | CCNNGG | 1 cut(s) | 314 |
| BsaWI | WCCGGW | 1 cut(s) | 362 |
| Bse1I | ACTGG | 3 cut(s) | 199, 227, 414 |
| BseAI | TCCGGA | 1 cut(s) | 362 |
| BseBI | CCWGG | 1 cut(s) | 315 |
| BseDI | CCNNGG | 1 cut(s) | 314 |
| BseGI | GGATG | 3 cut(s) | 61, 99, 133 |
| BseNI | ACTGG | 3 cut(s) | 199, 227, 414 |
| BsiSI | CCGG | 1 cut(s) | 363 |
| Bsp13I | TCCGGA | 1 cut(s) | 362 |
| Bsp143I | GATC | 2 cut(s) | 271, 439 |
| BspEI | TCCGGA | 1 cut(s) | 362 |
| BspMAI | CTGCAG | 1 cut(s) | 328 |
| BspPI | GGATC | 1 cut(s) | 279 |
| BsrI | ACTGG | 3 cut(s) | 199, 227, 414 |
| BssECI | CCNNGG | 1 cut(s) | 314 |
| BssMI | GATC | 2 cut(s) | 271, 439 |
| Bst2UI | CCWGG | 1 cut(s) | 315 |
| Bst6I | CTCTTC | 2 cut(s) | 72, 339 |
| BstF5I | GGATG | 3 cut(s) | 61, 99, 133 |
| BstKTI | GATC | 2 cut(s) | 274, 442 |
| BstMBI | GATC | 2 cut(s) | 271, 439 |
| BstNI | CCWGG | 1 cut(s) | 315 |
| BstSCI | CCNGG | 1 cut(s) | 313 |
| BstSFI | CTRYAG | 1 cut(s) | 324 |
| BstX2I | RGATCY | 1 cut(s) | 271 |
| BstYI | RGATCY | 1 cut(s) | 271 |
| BtsCI | GGATG | 3 cut(s) | 61, 99, 133 |
| BtsIMutI | CAGTG | 1 cut(s) | 234 |
| CviAII | CATG | 2 cut(s) | 23, 292 |
| CviJI | RGCY | 5 cut(s) | 39, 147, 198, 243, 255 |
| CviKI_1 | RGCY | 5 cut(s) | 39, 147, 198, 243, 255 |
| DpnI | GATC | 2 cut(s) | 273, 441 |
| DpnII | GATC | 2 cut(s) | 271, 439 |
| Eam1104I | CTCTTC | 2 cut(s) | 72, 339 |
| EarI | CTCTTC | 2 cut(s) | 72, 339 |
| Eco57I | CTGAAG | 1 cut(s) | 456 |
| EcoRII | CCWGG | 1 cut(s) | 313 |
| EcoT22I | ATGCAT | 1 cut(s) | 297 |
| FaeI | CATG | 2 cut(s) | 26, 295 |
| FaiI | YATR | 7 cut(s) | 24, 44, 180, 191, 293, 297, 371 |
| FatI | CATG | 2 cut(s) | 22, 291 |
| FokI | GGATG | 3 cut(s) | 68, 106, 140 |
| FspBI | CTAG | 2 cut(s) | 222, 275 |
| HapII | CCGG | 1 cut(s) | 363 |
| Hin1II | CATG | 2 cut(s) | 26, 295 |
| HincII | GTYRAC | 1 cut(s) | 204 |
| HindII | GTYRAC | 1 cut(s) | 204 |
| HindIII | AAGCTT | 1 cut(s) | 145 |
| HpaI | GTTAAC | 1 cut(s) | 204 |
| HpaII | CCGG | 1 cut(s) | 363 |
| HphI | GGTGA | 2 cut(s) | 147, 438 |
| Hpy166II | GTNNAC | 3 cut(s) | 20, 204, 391 |
| Hpy188I | TCNGA | 3 cut(s) | 55, 85, 407 |
| Hpy188III | TCNNGA | 1 cut(s) | 363 |
| Hpy8I | GTNNAC | 3 cut(s) | 20, 204, 391 |
| HpyCH4V | TGCA | 3 cut(s) | 261, 295, 326 |
| Hsp92II | CATG | 2 cut(s) | 26, 295 |
| Kpn2I | TCCGGA | 1 cut(s) | 362 |
| KspAI | GTTAAC | 1 cut(s) | 204 |
| Kzo9I | GATC | 2 cut(s) | 271, 439 |
| LmnI | GCTCC | 1 cut(s) | 175 |
| LweI | GCATC | 1 cut(s) | 225 |
| MaeI | CTAG | 2 cut(s) | 222, 275 |
| MaeIII | GTNAC | 3 cut(s) | 153, 328, 444 |
| MalI | GATC | 2 cut(s) | 273, 441 |
| MboI | GATC | 2 cut(s) | 271, 439 |
| MboII | GAAGA | 4 cut(s) | 59, 326, 390, 449 |
| MflI | RGATCY | 1 cut(s) | 271 |
| MluCI | AATT | 2 cut(s) | 354, 381 |
| MnlI | CCTC | 3 cut(s) | 196, 299, 409 |
| Mph1103I | ATGCAT | 1 cut(s) | 297 |
| MroI | TCCGGA | 1 cut(s) | 362 |
| MroXI | GAANNNNTTC | 1 cut(s) | 147 |
| MseI | TTAA | 3 cut(s) | 203, 233, 353 |
| MspI | CCGG | 1 cut(s) | 363 |
| MspR9I | CCNGG | 1 cut(s) | 315 |
| MvaI | CCWGG | 1 cut(s) | 315 |
| NdeII | GATC | 2 cut(s) | 271, 439 |
| NlaIII | CATG | 2 cut(s) | 26, 295 |
| NmuCI | GTSAC | 2 cut(s) | 153, 444 |
| NsiI | ATGCAT | 1 cut(s) | 297 |
| PdmI | GAANNNNTTC | 1 cut(s) | 147 |
| Psp6I | CCWGG | 1 cut(s) | 313 |
| PspGI | CCWGG | 1 cut(s) | 313 |
| PstI | CTGCAG | 1 cut(s) | 328 |
| PsuI | RGATCY | 1 cut(s) | 271 |
| SaqAI | TTAA | 3 cut(s) | 203, 233, 353 |
| Sau3AI | GATC | 2 cut(s) | 271, 439 |
| ScrFI | CCNGG | 1 cut(s) | 315 |
| SetI | ASST | 6 cut(s) | 41, 149, 245, 267, 291, 451 |
| SfaNI | GCATC | 1 cut(s) | 225 |
| SfcI | CTRYAG | 1 cut(s) | 324 |
| SmlI | CTYRAG | 1 cut(s) | 300 |
| SmoI | CTYRAG | 1 cut(s) | 300 |
| Sse9I | AATT | 2 cut(s) | 354, 381 |
| SspMI | CTAG | 2 cut(s) | 222, 275 |
| StyD4I | CCNGG | 1 cut(s) | 313 |
| TaqI | TCGA | 1 cut(s) | 399 |
| TasI | AATT | 2 cut(s) | 354, 381 |
| Tru1I | TTAA | 3 cut(s) | 203, 233, 353 |
| Tru9I | TTAA | 3 cut(s) | 203, 233, 353 |
| TscAI | CASTG | 1 cut(s) | 234 |
| TseFI | GTSAC | 2 cut(s) | 153, 444 |
| Tsp45I | GTSAC | 2 cut(s) | 153, 444 |
| TspGWI | ACGGA | 3 cut(s) | 141, 188, 390 |
| TspRI | CASTG | 1 cut(s) | 234 |
| XapI | RAATTY | 1 cut(s) | 381 |
| XmnI | GAANNNNTTC | 1 cut(s) | 147 |
| XspI | CTAG | 2 cut(s) | 222, 275 |
| Zsp2I | ATGCAT | 1 cut(s) | 297 |