Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

OG0005996

Physical Location & Seq

Genomic Coordinates Forward (+)

17113545 .. 17116648

Gene Structure 3104 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1425 bp

ATGCTTCCCAAGCAAGATTTTGGGACCTTGGTACCTTTTGAAAAGAATTTCTATGCTGAAAGTCCTTCAGTGAGGGCAATGTCAGAGCATGATGTTATGGTGTATCGTACTAGGCGGGAGATTACTGTTGAAGGGCATGACATCCCAAAGCCGATTCAAATGTTTGAGGATGCGAATTTTCCTGATTACTGCCTCGAGGCAATTGCGAAATTGGGTTTTGTTGAACCAACACCAATTCAGGCACAAGGATGGCCAATGGCATTAAAGGGTAGAGATTTAATTGGCATCGCTGAGACTGGTTCTGGTAAGACCTTGTCTTATCTGCTGCCGGCTTTGGTACACATTAGTGCGCAGCATCGGTTAGTGCAGGGAGAAGGTCCTATTGCGTTAGTATTAGCACCTACTCGAGAATTGGCAGTTCAAATTCAAGAAGAAGCTTTAAAATTTGGCTTACGTTCCAATATTAGGAGTACTTGCATTTATGGAGGTGCTCCTAAAGGGCCCCAAATACGCGACCTTAAAAGAGGGGTTGAGATTGTCATAGCTACACCTGGCCGACTGATAGATATGTTGGAAGCTCAGCATACAAATTTGCGAAGAGTCACTTATCTAGTTTTAGATGAGGCTGATAGGATGTTGGACATGGGATTTGAGCCACAGATAAGGAAAATTGTTTCCCAAACCCGACCAGATCGGCAGACATTGTATTGGAGCGCCACGTGGCCAAGGGAGGTTGAAAGTTTAGCAAGGCAGTTTTTACGTAACCCATATAAGGTAATCATTGGATCAGCAAGCCTTAAAGCAAACCAGTCCATAAACCAAGTTGTTGAAGTTGTGACGGAGGTGGAGAAATACAATAGGCTGATCAAATTGCTCAAAGAAGCGATGGTTGGGAGCCGAATTCTGATATTTGTGGAGACGAAAAAGGGATGTGACCACGTTACTAAACAATTGAGGATGGATGGATGGCCAGCTCTATCCATCCATGGTGATAAAAACCAGGCCGAAAGGGACTGGGTCTTGGCTGAGTTTAAAAGTGGCAGGAACCCAATAATGACTGCCACTGATGTGGCTGCGCGGGGTCTTGATGTGAAGGACATAAAATGTGTGATCAATTATGATTTTCCATCAAGCCTTGAGGATTATGTCCACAGGATTGGAAGAACTGGACGTGCAGGAGCAACAGGAACTGCTTTAACCTTTTTCACGCACGCAAACGCAAAATTCGCTAGGGATCTAATCAAGATCCTTCAAGAAGCAGGTCAGGTTGTGAGCCCCGCATTGGCTGCAATGGCCCGATCAAGTGGTAGTTTCGGAGGATCCGGAGGGAACTTCCGCAATAGAGGACGGGGAGGAGGATTTGGGAACCGGGGCATGATTTCTGGTTCAAATACCGTTCCTATCGGTTACAAGAGACCTTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003729 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko03040 ko05202 ko05205 map03040 map05202 map05205

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

475

Amino Acids

52.6

Weight (kDa)

9.44

Isoelectric Point (pI)

33.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	77 - 247	6.9e-49	DEAD/DEAH box helicase
Helicase_C	PF00271	283 - 393	6.8e-32	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005996)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63120 AT5G63120 AT5G63120 AT5G63120 AT5G63120
fragaria_vesca	FvH4_5g06110 FvH4_5g06110 FvH4_5g06110 FvH4_5g06110 FvH4_5g06110 FvH4_5g06110
malus_domestica	MD06G1166600.v1.1 MD14G1172300.v1.1
prunus_persica	Prupe.5G166600_v2.0.a1 Prupe.5G166600_v2.0.a1 Prupe.5G166600_v2.0.a1
pyrus_communis	pycom06g14930 pycom14g14390
rosa_chinensis	RchiOBHm_Chr7g0192711
rosa_laevigata	RLG00000004335
rosa_multiflora	Rmu_sc0002040.1_g000012
rosa_roxburghii	Rroxscaffold_3G00262730
rosa_rugosa	Rorug07G0004000 Rorug07G0004100
rosa_samantha	Rh7CG133900 Rh7DG131300
rosa_wichuraiana	Rw7G011040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	194
Acc16I	TGCGCA	1 cut(s)	351
Acc36I	ACCTGC	1 cut(s)	1250
Acc65I	GGTACC	1 cut(s)	31
AccB1I	GGYRCC	1 cut(s)	31
AccII	CGCG	2 cut(s)	513, 1078
AccIII	TCCGGA	1 cut(s)	1322
AciI	CCGC	4 cut(s)	115, 1078, 1278, 1336
AclWI	GGATC	5 cut(s)	793, 1240, 1242, 1314, 1327
AcoI	YGGCCR	4 cut(s)	251, 553, 722, 968
AcsI	RAATTY	7 cut(s)	46, 175, 423, 443, 589, 900, 1223
AcuI	CTGAAG	1 cut(s)	51
AcvI	CACGTG	1 cut(s)	720
AfaI	GTAC	4 cut(s)	33, 109, 339, 472
AfiI	CCNNNNNNNGG	3 cut(s)	465, 772, 1282
AjiI	CACGTC	1 cut(s)	1172
AjnI	CCWGG	2 cut(s)	550, 999
AjuI	GAANNNNNNNTTGG	2 cut(s)	873, 905
AleI	CACNNNNGTG	2 cut(s)	345, 1067
AluBI	AGCT	4 cut(s)	437, 545, 578, 974
AluI	AGCT	4 cut(s)	437, 545, 578, 974
Alw21I	GWGCWC	1 cut(s)	493
Alw26I	GTCTC	3 cut(s)	287, 911, 1408
AlwI	GGATC	5 cut(s)	793, 1240, 1242, 1314, 1327
AlwNI	CAGNNNCTG	1 cut(s)	1190
Ama87I	CYCGRG	2 cut(s)	194, 405
Aor13HI	TCCGGA	1 cut(s)	1322
AoxI	GGCC	7 cut(s)	251, 500, 553, 722, 968, 1002, 1293
ApaI	GGGCCC	1 cut(s)	504
ApeKI	GCWGC	4 cut(s)	325, 352, 1073, 1286
ApoI	RAATTY	7 cut(s)	46, 175, 423, 443, 589, 900, 1223
ArsI	GACNNNNNNTTYG	2 cut(s)	632, 664
Asp718I	GGTACC	1 cut(s)	31
AspLEI	GCGC	3 cut(s)	352, 716, 1078
AspS9I	GGNCC	5 cut(s)	24, 377, 500, 501, 1294
AsuC2I	CCSGG	1 cut(s)	1370
AsuHPI	GGTGA	1 cut(s)	1001
AvaI	CYCGRG	2 cut(s)	194, 405
AvaII	GGWCC	2 cut(s)	24, 377
BaeGI	GKGCMC	1 cut(s)	504
BaeI	ACNNNNGTAYC	2 cut(s)	15, 48
BalI	TGGCCA	3 cut(s)	253, 724, 970
BamHI	GGATCC	1 cut(s)	1319
BanI	GGYRCC	1 cut(s)	31
BanII	GRGCYC	2 cut(s)	504, 1277
BbrPI	CACGTG	1 cut(s)	720
Bbv12I	GWGCWC	1 cut(s)	493
BbvI	GCAGC	4 cut(s)	312, 364, 1060, 1273
BccI	CCATC	7 cut(s)	243, 880, 952, 956, 960, 989, 1135
BcgI	CGANNNNNNTGC	2 cut(s)	185, 219
BciT130I	CCWGG	2 cut(s)	552, 1001
BclI	TGATCA	2 cut(s)	864, 1110
BcnI	CCSGG	1 cut(s)	1370
BcoDI	GTCTC	3 cut(s)	287, 911, 1408
BfaI	CTAG	3 cut(s)	111, 611, 1230
BfoI	RGCGCY	1 cut(s)	717
BfuAI	ACCTGC	1 cut(s)	1250
BisI	GCNGC	4 cut(s)	326, 353, 1074, 1287
BlpI	GCTNAGC	1 cut(s)	579
BlsI	GCNGC	4 cut(s)	327, 354, 1075, 1288
BmcAI	AGTACT	1 cut(s)	472
Bme1390I	CCNGG	3 cut(s)	552, 1001, 1370
Bme18I	GGWCC	2 cut(s)	24, 377
BmeT110I	CYCGRG	2 cut(s)	194, 405
BmgBI	CACGTC	1 cut(s)	1172
BmgT120I	GGNCC	5 cut(s)	24, 377, 500, 501, 1294
BmiI	GGNNCC	8 cut(s)	25, 33, 502, 503, 896, 1046, 1321, 1367
BmrFI	CCNGG	3 cut(s)	552, 1001, 1370
BmrI	ACTGGG	1 cut(s)	1024
BmsI	GCATC	3 cut(s)	160, 294, 364
BmuI	ACTGGG	1 cut(s)	1024
Bpu1102I	GCTNAGC	1 cut(s)	579
BpuEI	CTTGAG	1 cut(s)	1157
BpuMI	CCSGG	1 cut(s)	1370
BsaAI	YACGTR	2 cut(s)	720, 761
BsaI	GGTCTC	1 cut(s)	1408
BsaJI	CCNNGG	5 cut(s)	27, 725, 985, 1369, 1418
BsaWI	WCCGGW	1 cut(s)	1322
Bsc4I	CCNNNNNNNGG	3 cut(s)	465, 772, 1282
Bse118I	RCCGGY	1 cut(s)	328
Bse1I	ACTGG	4 cut(s)	301, 808, 1019, 1171
Bse3DI	GCAATG	2 cut(s)	84, 1296
BseAI	TCCGGA	1 cut(s)	1322
BseBI	CCWGG	2 cut(s)	552, 1001
BseDI	CCNNGG	5 cut(s)	27, 725, 985, 1369, 1418
BseGI	GGATG	9 cut(s)	141, 175, 254, 639, 935, 963, 967, 971, 981
BseLI	CCNNNNNNNGG	3 cut(s)	465, 772, 1282
BseMI	GCAATG	2 cut(s)	84, 1296
BseMII	CTCAG	3 cut(s)	282, 593, 1017
BseNI	ACTGG	4 cut(s)	301, 808, 1019, 1171
BseRI	GAGGAG	1 cut(s)	1368
BseSI	GKGCMC	1 cut(s)	504
BseXI	GCAGC	4 cut(s)	312, 364, 1060, 1273
BsgI	GTGCAG	2 cut(s)	386, 1194
Bsh1236I	CGCG	2 cut(s)	513, 1078
BshFI	GGCC	7 cut(s)	253, 502, 555, 724, 970, 1004, 1295
BshNI	GGYRCC	1 cut(s)	31
BsiHKAI	GWGCWC	1 cut(s)	493
BsiHKCI	CYCGRG	2 cut(s)	194, 405
BsiSI	CCGG	3 cut(s)	329, 1323, 1369
BslFI	GGGAC	2 cut(s)	37, 1025
BslI	CCNNNNNNNGG	3 cut(s)	465, 772, 1282
BsmAI	GTCTC	3 cut(s)	287, 911, 1408
BsmBI	CGTCTC	1 cut(s)	911
BsmFI	GGGAC	2 cut(s)	37, 1025
BsnI	GGCC	7 cut(s)	253, 502, 555, 724, 970, 1004, 1295
Bso31I	GGTCTC	1 cut(s)	1408
BsoBI	CYCGRG	2 cut(s)	194, 405
Bsp120I	GGGCCC	1 cut(s)	500
Bsp1286I	GDGCHC	3 cut(s)	493, 504, 1277
Bsp13I	TCCGGA	1 cut(s)	1322
Bsp143I	GATC	8 cut(s)	691, 785, 864, 1110, 1234, 1245, 1298, 1319
Bsp1720I	GCTNAGC	1 cut(s)	579
Bsp19I	CCATGG	1 cut(s)	985
BspACI	CCGC	4 cut(s)	115, 1078, 1278, 1336
BspANI	GGCC	7 cut(s)	253, 502, 555, 724, 970, 1004, 1295
BspCNI	CTCAG	3 cut(s)	283, 592, 1018
BspEI	TCCGGA	1 cut(s)	1322
BspFNI	CGCG	2 cut(s)	513, 1078
BspLI	GGNNCC	8 cut(s)	25, 33, 502, 503, 896, 1046, 1321, 1367
BspMI	ACCTGC	1 cut(s)	1250
BspPI	GGATC	5 cut(s)	793, 1240, 1242, 1314, 1327
BspT107I	GGYRCC	1 cut(s)	31
BspTNI	GGTCTC	1 cut(s)	1408
BsrDI	GCAATG	2 cut(s)	84, 1296
BsrFI	RCCGGY	1 cut(s)	328
BsrI	ACTGG	4 cut(s)	301, 808, 1019, 1171
BssAI	RCCGGY	1 cut(s)	328
BssECI	CCNNGG	5 cut(s)	27, 725, 985, 1369, 1418
BssMI	GATC	8 cut(s)	691, 785, 864, 1110, 1234, 1245, 1298, 1319
BssT1I	CCWWGG	4 cut(s)	27, 725, 985, 1418
Bst2UI	CCWGG	2 cut(s)	552, 1001
Bst4CI	ACNGT	2 cut(s)	127, 1396
Bst6I	CTCTTC	1 cut(s)	592
BstAPI	GCANNNNNTGC	1 cut(s)	1286
BstBAI	YACGTR	2 cut(s)	720, 761
BstC8I	GCNNGC	4 cut(s)	330, 793, 972, 1212
BstDEI	CTNAG	3 cut(s)	291, 579, 1026
BstDSI	CCRYGG	1 cut(s)	985
BstF5I	GGATG	9 cut(s)	141, 175, 254, 639, 935, 963, 967, 971, 981
BstFNI	CGCG	2 cut(s)	513, 1078
BstH2I	RGCGCY	1 cut(s)	717
BstHHI	GCGC	3 cut(s)	352, 716, 1078
BstKTI	GATC	8 cut(s)	694, 788, 867, 1113, 1237, 1248, 1301, 1322
BstMAI	GTCTC	3 cut(s)	287, 911, 1408
BstMBI	GATC	8 cut(s)	691, 785, 864, 1110, 1234, 1245, 1298, 1319
BstMWI	GCNNNNNNNGC	4 cut(s)	10, 1226, 1286, 1292
BstNI	CCWGG	2 cut(s)	552, 1001
BstSCI	CCNGG	3 cut(s)	550, 999, 1368
BstSLI	GKGCMC	1 cut(s)	504
BstSNI	TACGTA	1 cut(s)	761
BstUI	CGCG	2 cut(s)	513, 1078
BstV1I	GCAGC	4 cut(s)	312, 364, 1060, 1273
BstX2I	RGATCY	3 cut(s)	1234, 1245, 1319
BstXI	CCANNNNNNTGG	2 cut(s)	1069, 1157
BstYI	RGATCY	3 cut(s)	1234, 1245, 1319
BsuRI	GGCC	7 cut(s)	253, 502, 555, 724, 970, 1004, 1295
BtgI	CCRYGG	1 cut(s)	985
BtgZI	GCGATG	2 cut(s)	271, 899
BtrI	CACGTC	1 cut(s)	1172
BtsCI	GGATG	9 cut(s)	141, 175, 254, 639, 935, 963, 967, 971, 981
BtsIMutI	CAGTG	2 cut(s)	75, 1062
BveI	ACCTGC	1 cut(s)	1250
Cac8I	GCNNGC	4 cut(s)	330, 793, 972, 1212
CaiI	CAGNNNCTG	1 cut(s)	1190
CfoI	GCGC	3 cut(s)	352, 716, 1078
Cfr10I	RCCGGY	1 cut(s)	328
Cfr13I	GGNCC	5 cut(s)	24, 377, 500, 501, 1294
Csp6I	GTAC	4 cut(s)	32, 108, 338, 471
CviAII	CATG	5 cut(s)	89, 137, 643, 986, 1375
CviQI	GTAC	4 cut(s)	32, 108, 338, 471
DdeI	CTNAG	3 cut(s)	291, 579, 1026
DpnI	GATC	8 cut(s)	693, 787, 866, 1112, 1236, 1247, 1300, 1321
DpnII	GATC	8 cut(s)	691, 785, 864, 1110, 1234, 1245, 1298, 1319
DraI	TTTAAA	2 cut(s)	441, 1033
EaeI	YGGCCR	4 cut(s)	251, 553, 722, 968
Eam1104I	CTCTTC	1 cut(s)	592
EarI	CTCTTC	1 cut(s)	592
Eco105I	TACGTA	1 cut(s)	761
Eco130I	CCWWGG	4 cut(s)	27, 725, 985, 1418
Eco24I	GRGCYC	2 cut(s)	504, 1277
Eco31I	GGTCTC	1 cut(s)	1408
Eco47I	GGWCC	2 cut(s)	24, 377
Eco57I	CTGAAG	1 cut(s)	51
Eco72I	CACGTG	1 cut(s)	720
Eco88I	CYCGRG	2 cut(s)	194, 405
EcoO109I	RGGNCCY	4 cut(s)	24, 377, 500, 501
EcoRI	GAATTC	1 cut(s)	900
EcoRII	CCWGG	2 cut(s)	550, 999
EcoT14I	CCWWGG	4 cut(s)	27, 725, 985, 1418
EcoT38I	GRGCYC	2 cut(s)	504, 1277
ErhI	CCWWGG	4 cut(s)	27, 725, 985, 1418
Esp3I	CGTCTC	1 cut(s)	911
FaeI	CATG	5 cut(s)	92, 140, 646, 989, 1378
FalI	AAGNNNNNCTT	2 cut(s)	589, 621
FaqI	GGGAC	2 cut(s)	37, 1025
FatI	CATG	5 cut(s)	88, 136, 642, 985, 1374
FauI	CCCGC	3 cut(s)	108, 1071, 1285
FbaI	TGATCA	2 cut(s)	864, 1110
Fnu4HI	GCNGC	4 cut(s)	326, 353, 1074, 1287
FokI	GGATG	9 cut(s)	128, 182, 261, 646, 942, 968, 970, 974, 978
FriOI	GRGCYC	2 cut(s)	504, 1277
Fsp4HI	GCNGC	4 cut(s)	326, 353, 1074, 1287
FspBI	CTAG	3 cut(s)	111, 611, 1230
FspI	TGCGCA	1 cut(s)	351
GlaI	GCGC	3 cut(s)	351, 715, 1077
GluI	GCNGC	4 cut(s)	326, 353, 1074, 1287
HaeII	RGCGCY	1 cut(s)	717
HaeIII	GGCC	7 cut(s)	253, 502, 555, 724, 970, 1004, 1295
HapII	CCGG	3 cut(s)	329, 1323, 1369
HhaI	GCGC	3 cut(s)	352, 716, 1078
Hin1II	CATG	5 cut(s)	92, 140, 646, 989, 1378
Hin6I	GCGC	3 cut(s)	350, 714, 1076
HinP1I	GCGC	3 cut(s)	350, 714, 1076
HindIII	AAGCTT	1 cut(s)	435
HinfI	GANTC	2 cut(s)	154, 600
HpaII	CCGG	3 cut(s)	329, 1323, 1369
HphI	GGTGA	1 cut(s)	1001
Hpy166II	GTNNAC	2 cut(s)	340, 1150
Hpy188I	TCNGA	3 cut(s)	85, 906, 1316
Hpy188III	TCNNGA	7 cut(s)	182, 407, 428, 1085, 1243, 1253, 1323
Hpy8I	GTNNAC	2 cut(s)	340, 1150
HpyAV	CCTTC	5 cut(s)	75, 125, 368, 1087, 1259
HpyCH4III	ACNGT	2 cut(s)	127, 1396
HpyCH4IV	ACGT	5 cut(s)	454, 719, 760, 939, 1171
HpyCH4V	TGCA	4 cut(s)	367, 477, 1175, 1289
HpyF10VI	GCNNNNNNNGC	4 cut(s)	10, 1226, 1286, 1292
HpyF3I	CTNAG	3 cut(s)	291, 579, 1026
HpySE526I	ACGT	5 cut(s)	454, 719, 760, 939, 1171
Hsp92II	CATG	5 cut(s)	92, 140, 646, 989, 1378
HspAI	GCGC	3 cut(s)	350, 714, 1076
Kpn2I	TCCGGA	1 cut(s)	1322
KpnI	GGTACC	1 cut(s)	35
KroI	GCCGGC	1 cut(s)	328
KroNI	GCCGGC	1 cut(s)	330
Ksp22I	TGATCA	2 cut(s)	864, 1110
Kzo9I	GATC	8 cut(s)	691, 785, 864, 1110, 1234, 1245, 1298, 1319
LmnI	GCTCC	4 cut(s)	496, 711, 894, 1178
Lsp1109I	GCAGC	4 cut(s)	312, 364, 1060, 1273
LweI	GCATC	3 cut(s)	160, 294, 364
MaeI	CTAG	3 cut(s)	111, 611, 1230
MaeII	ACGT	5 cut(s)	454, 719, 760, 939, 1171
MaeIII	GTNAC	6 cut(s)	601, 761, 835, 932, 940, 1406
MalI	GATC	8 cut(s)	693, 787, 866, 1112, 1236, 1247, 1300, 1321
MboI	GATC	8 cut(s)	691, 785, 864, 1110, 1234, 1245, 1298, 1319
MboII	GAAGA	3 cut(s)	443, 609, 1173
MfeI	CAATTG	2 cut(s)	201, 950
MflI	RGATCY	3 cut(s)	1234, 1245, 1319
MhlI	GDGCHC	3 cut(s)	493, 504, 1277
MlsI	TGGCCA	3 cut(s)	253, 724, 970
MluNI	TGGCCA	3 cut(s)	253, 724, 970
MlyI	GAGTC	1 cut(s)	609
MmeI	TCCRAC	2 cut(s)	552, 618
Mox20I	TGGCCA	3 cut(s)	253, 724, 970
MroI	TCCGGA	1 cut(s)	1322
MroNI	GCCGGC	1 cut(s)	328
MscI	TGGCCA	3 cut(s)	253, 724, 970
MseI	TTAA	7 cut(s)	263, 278, 440, 519, 798, 1032, 1196
MslI	CAYNNNNRTG	3 cut(s)	247, 345, 1067
Msp20I	TGGCCA	3 cut(s)	253, 724, 970
MspI	CCGG	3 cut(s)	329, 1323, 1369
MspR9I	CCNGG	3 cut(s)	552, 1001, 1370
MunI	CAATTG	2 cut(s)	201, 950
MvaI	CCWGG	2 cut(s)	552, 1001
MvnI	CGCG	2 cut(s)	513, 1078
MwoI	GCNNNNNNNGC	4 cut(s)	10, 1226, 1286, 1292
NaeI	GCCGGC	1 cut(s)	330
NciI	CCSGG	1 cut(s)	1370
NcoI	CCATGG	1 cut(s)	985
NdeII	GATC	8 cut(s)	691, 785, 864, 1110, 1234, 1245, 1298, 1319
NgoMIV	GCCGGC	1 cut(s)	328
NlaIII	CATG	5 cut(s)	92, 140, 646, 989, 1378
NlaIV	GGNNCC	8 cut(s)	25, 33, 502, 503, 896, 1046, 1321, 1367
NmuCI	GTSAC	3 cut(s)	601, 835, 932
NsbI	TGCGCA	1 cut(s)	351
OliI	CACNNNNGTG	2 cut(s)	345, 1067
PaeR7I	CTCGAG	2 cut(s)	194, 405
PdiI	GCCGGC	1 cut(s)	330
PfeI	GAWTC	1 cut(s)	154
PflFI	GACNNNGTC	2 cut(s)	313, 1016
PkrI	GCNGC	4 cut(s)	327, 354, 1075, 1288
PleI	GAGTC	1 cut(s)	608
PmaCI	CACGTG	1 cut(s)	720
PmlI	CACGTG	1 cut(s)	720
PpsI	GAGTC	1 cut(s)	608
Ppu21I	YACGTR	2 cut(s)	720, 761
PpuMI	RGGWCCY	2 cut(s)	24, 377
Psp5II	RGGWCCY	2 cut(s)	24, 377
Psp6I	CCWGG	2 cut(s)	550, 999
PspCI	CACGTG	1 cut(s)	720
PspGI	CCWGG	2 cut(s)	550, 999
PspN4I	GGNNCC	8 cut(s)	25, 33, 502, 503, 896, 1046, 1321, 1367
PspOMI	GGGCCC	1 cut(s)	500
PspPI	GGNCC	5 cut(s)	24, 377, 500, 501, 1294
PspPPI	RGGWCCY	2 cut(s)	24, 377
PspXI	VCTCGAGB	1 cut(s)	194
PstNI	CAGNNNCTG	1 cut(s)	1190
PsuI	RGATCY	3 cut(s)	1234, 1245, 1319
PsyI	GACNNNGTC	2 cut(s)	313, 1016
RsaI	GTAC	4 cut(s)	33, 109, 339, 472
RsaNI	GTAC	4 cut(s)	32, 108, 338, 471
RseI	CAYNNNNRTG	3 cut(s)	247, 345, 1067
SaqAI	TTAA	7 cut(s)	263, 278, 440, 519, 798, 1032, 1196
SatI	GCNGC	4 cut(s)	326, 353, 1074, 1287
Sau3AI	GATC	8 cut(s)	691, 785, 864, 1110, 1234, 1245, 1298, 1319
Sau96I	GGNCC	5 cut(s)	24, 377, 500, 501, 1294
ScaI	AGTACT	1 cut(s)	472
SchI	GAGTC	1 cut(s)	609
ScrFI	CCNGG	3 cut(s)	552, 1001, 1370
SduI	GDGCHC	3 cut(s)	493, 504, 1277
SfaNI	GCATC	3 cut(s)	160, 294, 364
Sfr274I	CTCGAG	2 cut(s)	194, 405
SinI	GGWCC	2 cut(s)	24, 377
SlaI	CTCGAG	2 cut(s)	194, 405
SmiMI	CAYNNNNRTG	3 cut(s)	247, 345, 1067
SmlI	CTYRAG	3 cut(s)	194, 405, 1136
SmoI	CTYRAG	3 cut(s)	194, 405, 1136
SnaBI	TACGTA	1 cut(s)	761
SsiI	CCGC	4 cut(s)	115, 1078, 1278, 1336
SspI	AATATT	1 cut(s)	463
SspMI	CTAG	3 cut(s)	111, 611, 1230
StyD4I	CCNGG	3 cut(s)	550, 999, 1368
StyI	CCWWGG	4 cut(s)	27, 725, 985, 1418
TaaI	ACNGT	2 cut(s)	127, 1396
TaiI	ACGT	5 cut(s)	457, 722, 763, 942, 1174
TaqI	TCGA	2 cut(s)	195, 406
TatI	WGTACW	1 cut(s)	470
TfiI	GAWTC	1 cut(s)	154
Tru1I	TTAA	7 cut(s)	263, 278, 440, 519, 798, 1032, 1196
Tru9I	TTAA	7 cut(s)	263, 278, 440, 519, 798, 1032, 1196
TscAI	CASTG	2 cut(s)	75, 1069
TseFI	GTSAC	3 cut(s)	601, 835, 932
TseI	GCWGC	4 cut(s)	325, 352, 1073, 1286
Tsp45I	GTSAC	3 cut(s)	601, 835, 932
TspGWI	ACGGA	1 cut(s)	854
TspRI	CASTG	2 cut(s)	75, 1069
Tth111I	GACNNNGTC	2 cut(s)	313, 1016
VpaK11BI	GGWCC	2 cut(s)	24, 377
XapI	RAATTY	7 cut(s)	46, 175, 423, 443, 589, 900, 1223
XhoI	CTCGAG	2 cut(s)	194, 405
XspI	CTAG	3 cut(s)	111, 611, 1230
ZrmI	AGTACT	1 cut(s)	472

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.