pycom14g18960

Part of the AP-3 complex, an adaptor-related complex which seems to be clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane and may be directly involved in trafficking to the vacuole. It also function in maintaining the identity of lytic vacuoles and in regulating the transition between storage and lytic vacuoles

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Forward (+)
20483403 .. 20486627
3225 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3060 bp
ATGTTCTTTATTTCAATCAATGCAGATGACGTTTACCGTATAAACAATCATGTTTATATACAACATTTGCGGGTTCGATCCCTACTAAGTTTTTTCTCTAACCTTTCCAAAGTCGAAACAGAGCTTTTACCCAAAGCCATCACCTTTGCCCAACATTCCCACCTTGTACAGAGTGTGTGGCGCCACCGTAAAAATTACCAAATCTCAAATCCTCCGCCGCCCATGGCGGGTTCCTCCCTCATGGAAAACCTCTTCCAGCGCACGCTGGAGGACCTAATCAAAGGCCTCCGCCTCCAGCTCATCGGCGAGTCCGCCTTCCTCTCCAAAGCCCTCGACGAAATCCGCCGCGAAGTCAAATCCACCGATGCCGACACCAAAGCGAACGCCCTCCACAAGCTCACCTACCTCTCCTCCCTCCACTTCTACGACATGTCCTTCGCCGCCTTCCACGTCGTCGAGCTCCTCTCCTCCACCCGCTTCTCCCACAAGAAGATCGCCTACCACGCCGCCGCCCACTCCTTCTCCGACGACACCCCCGTCCTCGTCCTCATCACCAACCAGCTCCGCAAGGACCTCACCTCCACCAACGAGTTCGAGGTAAGCTTAGCGCTCGAATGCCTTTCTAGAATTGCTACAGTAGATCTTGCTAGGGATTTGACACCTGAGATTTTCACCTTGCTGGGTAGCGGTAAGGTTTTCGTTCAAAAGAAAGCGATCGCCGTGCTTTTGAGGGTGTTTGATAAATACCCAGATGCTGTGAGGGTGTGTTTTAAGCGTTTGGTTGAGAATTTGGAGAGTCCAGACTCGCAGATTGTGTCTGTGGCTGTTGGGGTGTTTTGTGAGCTTGCTTTGAGAGAACCCAGATCGTATCTTCCGTTGGCGCCGGAGTTTTATAAGATCCTGGTTGATTCTAAGAACAATTGGGTTTTGATTAAGGTGTTGAAGATATTTGCAAAGTTGGCCCCTTTAGAACCTAGGTTGGCGAAGAGGGTTGTTGAGCCGGTATGTGAGCATATCAGGAGGACCGGGGCCAAATCGTTGCTGTTTGAGTGTATTAGGACTGTGGTGACCAGTTTGAGTGATTATGAATCTGCAGTGAAGGTGGTGGTTGTCAAAATTCGCGAAATGCTAGTTGATGATGATCCGAATCTTAAGTATCTCGCATTGCAGGCACTTTCAGTTGTTGCAACAAAGCATTTGTGGGCAGTTTTGGAGAATAAGGAGGTTGTGATTAAGTCTTTGAGTGATGTGGATTCGAATATCAAGCTGGAGTCTTTGCGTCTTGTTATGGCAATGGTATCTGAGAATAATGTGGCTGAAATTTGCAGGGTTTTGGTCAATTATGCTCTTAAATCTGATCCAGAGTTTTGCAATGAGATTCTTGGTTCCATTTTATCAACATGCTGCAGTGATGTATATGAGATTATTGTGGACTTCGATTGGTATGTATCACTTTTGGGAGAAATGTCGAGCGATCCTGCATTGCCAGCAGGGGTCAAGGATGTTAGACCAGAGCTTGTTCGGGTTAGTCGTGATCTGCAGATGTTGTCGGCTGCTGCTTGGCTGTCAGGGCAATATGTTGAGTTCTCAGTAAACCCATTTGAACTCATGGAGGCACTATTACAACCTCGTACAACTCTCTTGCCACCATCTATAAGAGCGGTATATGTACAATCTGCTCTCAAAGTTTTAATCTTTTGTCTAAATGCTTACCTATTGCAGAGGGGGAATGCTGCTTCCTCCTCAACTTTTGATAGATTGGTGCCAGATGTTCCAGGATTGGTTTCGGAACGAGATGGCCCAGAGAGTTCTAGTTTGGCATCATGTGATGCTCCTGTGCATTGCAAACAGGATGAAGGATTCAACCCGAGGGTTTTTAATCAGTCTTTTGAAGGTCCTTCAGTGGAACATGGTGGGGAGGAAACTGCTACTCTTGGGCAAGCATCTGTATCGTCTTCATTGAAGGATAGTTTCACACATGAATCTATCGTAAACCTTTTAAATCGAGTTGAATTGGCTGTGGTTCCCCTAACAGGAAGCTATGATGTAGAAATACTAGAGAGAGCACGAAATATACTTTGTTTCACCGAGTTGATTAAGCGAGATCTGCTTGATAGTCCAGTACAGAAGGAAGAGAGTTTGGAAAGGGAAGGAGCACAAGCGTCTCAAATCATCAAATTGATGCATGATGCCTTTTCAAATGATCTAGGTCCTGTCTCGGTAAGTGCTCAAGAAAGAGTTCCTGTACCAGATGGGTTAGTGCTTGTGGAGAATCTTGAAGACTTGGAAACAATCTTCGGTGATGTTCAACTACCTTCATTAAATTCATTCTCTCTTGGAAGCCCACAGTATGAGGAGAGAGCTGGTTTTTCTATTCCTATCCATGAAAGCAAAGAAGAGCCAGTGCCATCGAGTGAATCCACATCTCTACTTGCGGAACACCGTAAGCAGCACGGTTTATATTATCTTCCCTCTGCGAATAAAGAAGATGATTATCCACCTGCCAATGATACCAAATTACAGGCTGGTACCAATGACGACGACGGAGATCTAGTTAAGCTTACAGAGCAATTACTTCTTTCTAAGAAAAAGCCAAACCACGCAAAGCCTCGGCCTGTGGTGGTGAAATTAGATGGAGATCAAGCAACTATTGCGACCAACCCTCGTCCGAAGGAAGATTTGTTGTCTGGTACCGTGCGAGACGTTCTTTTAGGTAGTGACACCAATCCCACTTCATCCCAAGGTCAAACATCCACCAAGTCATCGAGTAAGAGAAAAGGGAAGGAGAAACTAAATGTTGATTCTGCTAAAGAAAACTTGGGTGGTGTTGAAAAGCATGATCAAGGAAACCCAGGTTCAAGAAAAAGCAAGCACCATAGTCATAGTAAAGGGAGAAGACATGGAAGCCCGGGGAAAAAAGGAGCTGAAACAGAAGAAAATGGTCAGAAATTGAAGCAGAAAAGTAGTCGTACCCATAGTAAGCACAAGGCTCGACAACGAGCGGAAGTGCCATTGAATGTGGTTGCACAAACACCGGTAATTCCAGATTTTCTTTTGTAG

Protein Analysis

1020

Amino Acids

113.11

Weight (kDa)

6.2

Isoelectric Point (pI)

42.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Adaptin_N PF01602 108 - 489 7.1e-77 Adaptin N terminal region
Cnd1 PF12717 202 - 344 3.5e-08 non-SMC mitotic condensation complex subunit 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011187)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 894
AarI CACCTGC 1 cut(s) 2509
AasI GACNNNNNNGTC 1 cut(s) 536
Acc36I ACCTGC 1 cut(s) 2509
Acc65I GGTACC 2 cut(s) 2528, 2690
AccB1I GGYRCC 5 cut(s) 180, 880, 1762, 2528, 2690
AccBSI CCGCTC 2 cut(s) 1661, 3002
AccII CGCG 2 cut(s) 348, 1122
AclWI GGATC 5 cut(s) 72, 892, 1136, 1352, 1469
AcsI RAATTY 4 cut(s) 787, 1116, 1320, 2323
AcuI CTGAAG 1 cut(s) 1884
AcyI GRCGYC 2 cut(s) 181, 881
AfaI GTAC 8 cut(s) 168, 1633, 1671, 2124, 2247, 2530, 2692, 2971
AfeI AGCGCT 1 cut(s) 609
AfiI CCNNNNNNNGG 2 cut(s) 227, 2033
AflII CTTAAG 1 cut(s) 1151
AflIII ACRYGT 1 cut(s) 429
AgeI ACCGGT 1 cut(s) 3034
AjiI CACGTC 1 cut(s) 451
AjnI CCWGG 3 cut(s) 900, 1774, 2851
Alw21I GWGCWC 4 cut(s) 462, 2068, 2158, 2230
Alw26I GTCTC 3 cut(s) 2169, 2221, 2694
AlwI GGATC 5 cut(s) 72, 892, 1136, 1352, 1469
AlwNI CAGNNNCTG 1 cut(s) 755
Ama87I CYCGRG 2 cut(s) 1867, 2908
Aor51HI AGCGCT 1 cut(s) 609
AoxI GGCC 5 cut(s) 283, 960, 1029, 1798, 2612
ApeKI GCWGC 5 cut(s) 1404, 1553, 1556, 1733, 2449
ApoI RAATTY 4 cut(s) 787, 1116, 1320, 2323
ArsI GACNNNNNNTTYG 2 cut(s) 419, 451
AsiGI ACCGGT 1 cut(s) 3034
AsiSI GCGATCGC 1 cut(s) 717
Asp700I GAANNNNTTC 1 cut(s) 2238
Asp718I GGTACC 2 cut(s) 2528, 2690
AspA2I CCTAGG 1 cut(s) 974
AspLEI GCGC 4 cut(s) 183, 261, 610, 883
AspS9I GGNCC 8 cut(s) 271, 571, 961, 1023, 1029, 1799, 1895, 2210
AsuC2I CCSGG 3 cut(s) 1027, 2909, 2910
AsuHPI GGTGA 9 cut(s) 133, 391, 544, 568, 664, 1078, 2077, 2312, 2635
AsuII TTCGAA 1 cut(s) 1256
AvaI CYCGRG 2 cut(s) 1867, 2908
AvaII GGWCC 5 cut(s) 271, 571, 1023, 1895, 2210
AvrII CCTAGG 1 cut(s) 974
BanI GGYRCC 5 cut(s) 180, 880, 1762, 2528, 2690
BanII GRGCYC 1 cut(s) 462
BarI GAAGNNNNNNTAC 2 cut(s) 482, 514
BbsI GAAGAC 3 cut(s) 1947, 2286, 2902
Bbv12I GWGCWC 4 cut(s) 462, 2068, 2158, 2230
BbvI GCAGC 5 cut(s) 1391, 1540, 1543, 1720, 2461
BccI CCATC 6 cut(s) 146, 1657, 1790, 2246, 2416, 2627
BceAI ACGGC 1 cut(s) 704
BcgI CGANNNNNNTGC 6 cut(s) 703, 737, 1932, 1966, 2972, 3006
BciT130I CCWGG 3 cut(s) 902, 1776, 2853
BclI TGATCA 1 cut(s) 2839
BcnI CCSGG 3 cut(s) 1027, 2909, 2910
BcoDI GTCTC 3 cut(s) 2169, 2221, 2694
BfaI CTAG 8 cut(s) 624, 648, 975, 1130, 1812, 2057, 2207, 2552
BfmI CTRYAG 4 cut(s) 633, 1092, 1405, 1538
BfoI RGCGCY 3 cut(s) 184, 611, 884
BfrI CTTAAG 1 cut(s) 1151
BfuAI ACCTGC 1 cut(s) 2509
BglII AGATCT 3 cut(s) 640, 2104, 2548
BlnI CCTAGG 1 cut(s) 974
BlpI GCTNAGC 1 cut(s) 604
Bme1390I CCNGG 6 cut(s) 902, 1027, 1776, 2853, 2909, 2910
Bme18I GGWCC 5 cut(s) 271, 571, 1023, 1895, 2210
BmeT110I CYCGRG 2 cut(s) 1867, 2908
BmgBI CACGTC 1 cut(s) 451
BmgT120I GGNCC 8 cut(s) 271, 571, 961, 1023, 1029, 1799, 1895, 2210
BmrFI CCNGG 6 cut(s) 902, 1027, 1776, 2853, 2909, 2910
BmsI GCATC 7 cut(s) 355, 742, 1819, 1829, 1952, 2172, 2179
BpiI GAAGAC 3 cut(s) 1947, 2286, 2902
BplI GAGNNNNNCTC 2 cut(s) 449, 481
BpmI CTGGAG 3 cut(s) 278, 287, 1289
Bpu1102I GCTNAGC 1 cut(s) 604
Bpu14I TTCGAA 1 cut(s) 1256
BpuEI CTTGAG 1 cut(s) 2214
BpuMI CCSGG 3 cut(s) 1027, 2909, 2910
BsaBI GATNNNNATC 4 cut(s) 1140, 1146, 2493, 2637
BsaHI GRCGYC 2 cut(s) 181, 881
BsaJI CCNNGG 9 cut(s) 222, 974, 1026, 1868, 2609, 2740, 2851, 2908, 2909
BsaWI WCCGGW 1 cut(s) 3034
BsaXI ACNNNNNCTCC 8 cut(s) 395, 425, 506, 536, 563, 593, 2538, 2568
Bsc4I CCNNNNNNNGG 2 cut(s) 227, 2033
Bse118I RCCGGY 2 cut(s) 1000, 3034
Bse1I ACTGG 3 cut(s) 1071, 2120, 2402
Bse3DI GCAATG 5 cut(s) 1163, 1299, 1378, 1481, 1840
Bse8I GATNNNNATC 4 cut(s) 1140, 1146, 2493, 2637
BseBI CCWGG 3 cut(s) 902, 1776, 2853
BseDI CCNNGG 9 cut(s) 222, 974, 1026, 1868, 2609, 2740, 2851, 2908, 2909
BseGI GGATG 4 cut(s) 1507, 1858, 2735, 2750
BseJI GATNNNNATC 4 cut(s) 1140, 1146, 2493, 2637
BseLI CCNNNNNNNGG 2 cut(s) 227, 2033
BseMI GCAATG 5 cut(s) 1163, 1299, 1378, 1481, 1840
BseMII CTCAG 3 cut(s) 654, 1293, 1602
BseNI ACTGG 3 cut(s) 1071, 2120, 2402
BseRI GAGGAG 5 cut(s) 400, 452, 457, 1732, 2369
BseXI GCAGC 5 cut(s) 1391, 1540, 1543, 1720, 2461
BseYI CCCAGC 1 cut(s) 679
Bsh1236I CGCG 2 cut(s) 348, 1122
Bsh1285I CGRYCG 1 cut(s) 717
BshFI GGCC 5 cut(s) 285, 962, 1031, 1800, 2614
BshNI GGYRCC 5 cut(s) 180, 880, 1762, 2528, 2690
BshTI ACCGGT 1 cut(s) 3034
BsiEI CGRYCG 1 cut(s) 717
BsiHKAI GWGCWC 4 cut(s) 462, 2068, 2158, 2230
BsiHKCI CYCGRG 2 cut(s) 1867, 2908
BsiSI CCGG 5 cut(s) 884, 1001, 1026, 2909, 3035
BslI CCNNNNNNNGG 2 cut(s) 227, 2033
BsmAI GTCTC 3 cut(s) 2169, 2221, 2694
BsmBI CGTCTC 2 cut(s) 2169, 2694
BsmI GAATGC 2 cut(s) 620, 1735
BsnI GGCC 5 cut(s) 285, 962, 1031, 1800, 2614
BsoBI CYCGRG 2 cut(s) 1867, 2908
Bsp119I TTCGAA 1 cut(s) 1256
Bsp1286I GDGCHC 4 cut(s) 462, 2068, 2158, 2230
Bsp1407I TGTACA 2 cut(s) 166, 1669
Bsp1720I GCTNAGC 1 cut(s) 604
Bsp19I CCATGG 1 cut(s) 222
Bsp68I TCGCGA 1 cut(s) 1122
BspANI GGCC 5 cut(s) 285, 962, 1031, 1800, 2614
BspCNI CTCAG 3 cut(s) 655, 1294, 1601
BspFNI CGCG 2 cut(s) 348, 1122
BspMAI CTGCAG 3 cut(s) 1096, 1409, 1542
BspMI ACCTGC 1 cut(s) 2509
BspPI GGATC 5 cut(s) 72, 892, 1136, 1352, 1469
BspQI GCTCTTC 1 cut(s) 2391
BspT104I TTCGAA 1 cut(s) 1256
BspT107I GGYRCC 5 cut(s) 180, 880, 1762, 2528, 2690
BspTI CTTAAG 1 cut(s) 1151
BsrBI CCGCTC 2 cut(s) 1661, 3002
BsrDI GCAATG 5 cut(s) 1163, 1299, 1378, 1481, 1840
BsrFI RCCGGY 2 cut(s) 1000, 3034
BsrGI TGTACA 2 cut(s) 166, 1669
BsrI ACTGG 3 cut(s) 1071, 2120, 2402
BssAI RCCGGY 2 cut(s) 1000, 3034
BssECI CCNNGG 9 cut(s) 222, 974, 1026, 1868, 2609, 2740, 2851, 2908, 2909
BssNI GRCGYC 2 cut(s) 181, 881
BssT1I CCWWGG 3 cut(s) 222, 974, 2740
Bst2UI CCWGG 3 cut(s) 902, 1776, 2853
Bst4CI ACNGT 8 cut(s) 38, 188, 637, 1063, 2349, 2444, 2456, 2695
Bst6I CTCTTC 4 cut(s) 257, 980, 2127, 2391
BstACI GRCGYC 2 cut(s) 181, 881
BstAFI CTTAAG 1 cut(s) 1151
BstAPI GCANNNNNTGC 1 cut(s) 2651
BstAUI TGTACA 2 cut(s) 166, 1669
BstBI TTCGAA 1 cut(s) 1256
BstC8I GCNNGC 6 cut(s) 263, 846, 1170, 1488, 1941, 2870
BstDEI CTNAG 7 cut(s) 86, 604, 663, 912, 1302, 1588, 2583
BstDSI CCRYGG 1 cut(s) 222
BstEII GGTNACC 1 cut(s) 1066
BstF5I GGATG 4 cut(s) 1507, 1858, 2735, 2750
BstFNI CGCG 2 cut(s) 348, 1122
BstH2I RGCGCY 3 cut(s) 184, 611, 884
BstHHI GCGC 4 cut(s) 183, 261, 610, 883
BstMAI GTCTC 3 cut(s) 2169, 2221, 2694
BstMCI CGRYCG 1 cut(s) 717
BstMWI GCNNNNNNNGC 8 cut(s) 503, 959, 1169, 1487, 1570, 2107, 2566, 2651
BstNI CCWGG 3 cut(s) 902, 1776, 2853
BstNSI RCATGY 2 cut(s) 433, 1404
BstPI GGTNACC 1 cut(s) 1066
BstSCI CCNGG 6 cut(s) 900, 1025, 1774, 2851, 2907, 2908
BstSFI CTRYAG 4 cut(s) 633, 1092, 1405, 1538
BstUI CGCG 2 cut(s) 348, 1122
BstV1I GCAGC 5 cut(s) 1391, 1540, 1543, 1720, 2461
BstV2I GAAGAC 3 cut(s) 1947, 2286, 2902
BstX2I RGATCY 4 cut(s) 640, 897, 2104, 2548
BstYI RGATCY 4 cut(s) 640, 897, 2104, 2548
BsuRI GGCC 5 cut(s) 285, 962, 1031, 1800, 2614
BtgI CCRYGG 1 cut(s) 222
BtrI CACGTC 1 cut(s) 451
BtsCI GGATG 4 cut(s) 1507, 1858, 2735, 2750
BtsI GCAGTG 2 cut(s) 1101, 1414
BtsIMutI CAGTG 4 cut(s) 1101, 1414, 1908, 2409
BtuMI TCGCGA 1 cut(s) 1122
BveI ACCTGC 1 cut(s) 2509
Cac8I GCNNGC 6 cut(s) 263, 846, 1170, 1488, 1941, 2870
CaiI CAGNNNCTG 1 cut(s) 755
CfoI GCGC 4 cut(s) 183, 261, 610, 883
Cfr10I RCCGGY 2 cut(s) 1000, 3034
Cfr13I GGNCC 8 cut(s) 271, 571, 961, 1023, 1029, 1799, 1895, 2210
Cfr9I CCCGGG 1 cut(s) 2908
CseI GACGC 2 cut(s) 1268, 2151
Csp6I GTAC 8 cut(s) 167, 1632, 1670, 2123, 2246, 2529, 2691, 2970
CspAI ACCGGT 1 cut(s) 3034
CviQI GTAC 8 cut(s) 167, 1632, 1670, 2123, 2246, 2529, 2691, 2970
DdeI CTNAG 7 cut(s) 86, 604, 663, 912, 1302, 1588, 2583
DinI GGCGCC 2 cut(s) 182, 882
DraI TTTAAA 1 cut(s) 2001
DrdI GACNNNNNNGTC 1 cut(s) 536
DseDI GACNNNNNNGTC 1 cut(s) 536
Eam1104I CTCTTC 4 cut(s) 257, 980, 2127, 2391
EarI CTCTTC 4 cut(s) 257, 980, 2127, 2391
EciI GGCGGA 4 cut(s) 204, 278, 301, 332
Ecl136II GAGCTC 1 cut(s) 460
Eco130I CCWWGG 3 cut(s) 222, 974, 2740
Eco147I AGGCCT 1 cut(s) 285
Eco24I GRGCYC 1 cut(s) 462
Eco47I GGWCC 5 cut(s) 271, 571, 1023, 1895, 2210
Eco47III AGCGCT 1 cut(s) 609
Eco53kI GAGCTC 1 cut(s) 460
Eco57I CTGAAG 1 cut(s) 1884
Eco88I CYCGRG 2 cut(s) 1867, 2908
Eco91I GGTNACC 1 cut(s) 1066
EcoICRI GAGCTC 1 cut(s) 460
EcoO109I RGGNCCY 4 cut(s) 271, 571, 1895, 2210
EcoO65I GGTNACC 1 cut(s) 1066
EcoRII CCWGG 3 cut(s) 900, 1774, 2851
EcoT14I CCWWGG 3 cut(s) 222, 974, 2740
EcoT22I ATGCAT 1 cut(s) 2187
EcoT38I GRGCYC 1 cut(s) 462
EgeI GGCGCC 2 cut(s) 182, 882
EheI GGCGCC 2 cut(s) 182, 882
ErhI CCWWGG 3 cut(s) 222, 974, 2740
Esp3I CGTCTC 2 cut(s) 2169, 2694
FauI CCCGC 3 cut(s) 63, 220, 482
FbaI TGATCA 1 cut(s) 2839
FokI GGATG 4 cut(s) 1514, 1865, 2722, 2737
FriOI GRGCYC 1 cut(s) 462
FspBI CTAG 8 cut(s) 624, 648, 975, 1130, 1812, 2057, 2207, 2552
GlaI GCGC 4 cut(s) 182, 260, 609, 882
GsaI CCCAGC 1 cut(s) 683
GsuI CTGGAG 3 cut(s) 278, 287, 1289
HaeII RGCGCY 3 cut(s) 184, 611, 884
HaeIII GGCC 5 cut(s) 285, 962, 1031, 1800, 2614
HapII CCGG 5 cut(s) 884, 1001, 1026, 2909, 3035
HgaI GACGC 2 cut(s) 1268, 2151
HhaI GCGC 4 cut(s) 183, 261, 610, 883
Hin1I GRCGYC 2 cut(s) 181, 881
Hin6I GCGC 4 cut(s) 181, 259, 608, 881
HinP1I GCGC 4 cut(s) 181, 259, 608, 881
HindIII AAGCTT 2 cut(s) 601, 2558
HpaII CCGG 5 cut(s) 884, 1001, 1026, 2909, 3035
HphI GGTGA 9 cut(s) 133, 391, 544, 568, 664, 1078, 2077, 2312, 2635
Hpy166II GTNNAC 4 cut(s) 34, 1432, 1594, 1993
Hpy188I TCNGA 7 cut(s) 526, 1146, 1303, 1357, 1789, 2670, 2946
Hpy8I GTNNAC 4 cut(s) 34, 1432, 1594, 1993
Hpy99I CGWCG 6 cut(s) 338, 455, 458, 530, 2543, 2546
HpyCH4III ACNGT 8 cut(s) 38, 188, 637, 1063, 2349, 2444, 2456, 2695
HpyCH4IV ACGT 3 cut(s) 30, 450, 2703
HpyF10VI GCNNNNNNNGC 8 cut(s) 503, 959, 1169, 1487, 1570, 2107, 2566, 2651
HpyF3I CTNAG 7 cut(s) 86, 604, 663, 912, 1302, 1588, 2583
HpySE526I ACGT 3 cut(s) 30, 450, 2703
Hsp92I GRCGYC 2 cut(s) 181, 881
HspAI GCGC 4 cut(s) 181, 259, 608, 881
KasI GGCGCC 2 cut(s) 180, 880
KpnI GGTACC 2 cut(s) 2532, 2694
Ksp22I TGATCA 1 cut(s) 2839
LguI GCTCTTC 1 cut(s) 2391
LmnI GCTCC 5 cut(s) 465, 567, 1837, 2153, 2921
Lsp1109I GCAGC 5 cut(s) 1391, 1540, 1543, 1720, 2461
LweI GCATC 7 cut(s) 355, 742, 1819, 1829, 1952, 2172, 2179
MaeI CTAG 8 cut(s) 624, 648, 975, 1130, 1812, 2057, 2207, 2552
MaeII ACGT 3 cut(s) 30, 450, 2703
MaeIII GTNAC 2 cut(s) 1066, 2717
MbiI CCGCTC 2 cut(s) 1661, 3002
MfeI CAATTG 1 cut(s) 919
MflI RGATCY 4 cut(s) 640, 897, 2104, 2548
MhlI GDGCHC 4 cut(s) 462, 2068, 2158, 2230
Mly113I GGCGCC 2 cut(s) 181, 881
MlyI GAGTC 4 cut(s) 317, 797, 805, 1280
MmeI TCCRAC 1 cut(s) 549
Mph1103I ATGCAT 1 cut(s) 2187
MroXI GAANNNNTTC 1 cut(s) 2238
MspCI CTTAAG 1 cut(s) 1151
MspI CCGG 5 cut(s) 884, 1001, 1026, 2909, 3035
MspR9I CCNGG 6 cut(s) 902, 1027, 1776, 2853, 2909, 2910
MunI CAATTG 1 cut(s) 919
Mva1269I GAATGC 2 cut(s) 620, 1735
MvaI CCWGG 3 cut(s) 902, 1776, 2853
MvnI CGCG 2 cut(s) 348, 1122
MwoI GCNNNNNNNGC 8 cut(s) 503, 959, 1169, 1487, 1570, 2107, 2566, 2651
NarI GGCGCC 2 cut(s) 181, 881
NciI CCSGG 3 cut(s) 1027, 2909, 2910
NcoI CCATGG 1 cut(s) 222
NmeAIII GCCGAG 1 cut(s) 2590
NmuCI GTSAC 2 cut(s) 1066, 2717
NruI TCGCGA 1 cut(s) 1122
NsiI ATGCAT 1 cut(s) 2187
NspI RCATGY 2 cut(s) 433, 1404
NspV TTCGAA 1 cut(s) 1256
PaqCI CACCTGC 1 cut(s) 2509
PceI AGGCCT 1 cut(s) 285
PciI ACATGT 1 cut(s) 429
PciSI GCTCTTC 1 cut(s) 2391
PcsI WCGNNNNNNNCGW 3 cut(s) 534, 872, 1528
PctI GAATGC 2 cut(s) 620, 1735
PdmI GAANNNNTTC 1 cut(s) 2238
PfoI TCCNGGA 1 cut(s) 1774
PinAI ACCGGT 1 cut(s) 3034
Ple19I CGATCG 1 cut(s) 717
PleI GAGTC 4 cut(s) 316, 797, 804, 1279
PluTI GGCGCC 2 cut(s) 184, 884
PpsI GAGTC 4 cut(s) 316, 797, 804, 1279
PpuMI RGGWCCY 4 cut(s) 271, 571, 1895, 2210
PscI ACATGT 1 cut(s) 429
PsiI TTATAA 1 cut(s) 894
Psp124BI GAGCTC 1 cut(s) 462
Psp5II RGGWCCY 4 cut(s) 271, 571, 1895, 2210
Psp6I CCWGG 3 cut(s) 900, 1774, 2851
PspEI GGTNACC 1 cut(s) 1066
PspFI CCCAGC 1 cut(s) 679
PspGI CCWGG 3 cut(s) 900, 1774, 2851
PspPI GGNCC 8 cut(s) 271, 571, 961, 1023, 1029, 1799, 1895, 2210
PspPPI RGGWCCY 4 cut(s) 271, 571, 1895, 2210
PstI CTGCAG 3 cut(s) 1096, 1409, 1542
PstNI CAGNNNCTG 1 cut(s) 755
PsuI RGATCY 4 cut(s) 640, 897, 2104, 2548
PvuI CGATCG 1 cut(s) 717
RgaI GCGATCGC 1 cut(s) 717
RruI TCGCGA 1 cut(s) 1122
RsaI GTAC 8 cut(s) 168, 1633, 1671, 2124, 2247, 2530, 2692, 2971
RsaNI GTAC 8 cut(s) 167, 1632, 1670, 2123, 2246, 2529, 2691, 2970
SacI GAGCTC 1 cut(s) 462
SapI GCTCTTC 1 cut(s) 2391
Sau96I GGNCC 8 cut(s) 271, 571, 961, 1023, 1029, 1799, 1895, 2210
SchI GAGTC 4 cut(s) 317, 797, 805, 1280
ScrFI CCNGG 6 cut(s) 902, 1027, 1776, 2853, 2909, 2910
SduI GDGCHC 4 cut(s) 462, 2068, 2158, 2230
SfaAI GCGATCGC 1 cut(s) 717
SfaNI GCATC 7 cut(s) 355, 742, 1819, 1829, 1952, 2172, 2179
SfcI CTRYAG 4 cut(s) 633, 1092, 1405, 1538
SfoI GGCGCC 2 cut(s) 182, 882
SfuI TTCGAA 1 cut(s) 1256
SgfI GCGATCGC 1 cut(s) 717
SinI GGWCC 5 cut(s) 271, 571, 1023, 1895, 2210
SmaI CCCGGG 1 cut(s) 2910
SmlI CTYRAG 2 cut(s) 1151, 2229
SmoI CTYRAG 2 cut(s) 1151, 2229
SseBI AGGCCT 1 cut(s) 285
SspDI GGCGCC 2 cut(s) 180, 880
SspMI CTAG 8 cut(s) 624, 648, 975, 1130, 1812, 2057, 2207, 2552
SstI GAGCTC 1 cut(s) 462
StuI AGGCCT 1 cut(s) 285
StyD4I CCNGG 6 cut(s) 900, 1025, 1774, 2851, 2907, 2908
StyI CCWWGG 3 cut(s) 222, 974, 2740
TaaI ACNGT 8 cut(s) 38, 188, 637, 1063, 2349, 2444, 2456, 2695
TaiI ACGT 3 cut(s) 33, 453, 2706
TatI WGTACW 3 cut(s) 166, 1669, 2122
TauI GCSGC 5 cut(s) 220, 348, 443, 509, 512
TscAI CASTG 4 cut(s) 1101, 1414, 1908, 2409
TseFI GTSAC 2 cut(s) 1066, 2717
TseI GCWGC 5 cut(s) 1404, 1553, 1556, 1733, 2449
Tsp45I GTSAC 2 cut(s) 1066, 2717
TspDTI ATGAA 8 cut(s) 1101, 1869, 1947, 1995, 2307, 2316, 2400, 2724
TspGWI ACGGA 2 cut(s) 864, 2559
TspMI CCCGGG 1 cut(s) 2908
TspRI CASTG 4 cut(s) 1101, 1414, 1908, 2409
Vha464I CTTAAG 1 cut(s) 1151
VpaK11BI GGWCC 5 cut(s) 271, 571, 1023, 1895, 2210
XapI RAATTY 4 cut(s) 787, 1116, 1320, 2323
XbaI TCTAGA 1 cut(s) 623
XceI RCATGY 2 cut(s) 433, 1404
XmaI CCCGGG 1 cut(s) 2908
XmaJI CCTAGG 1 cut(s) 974
XmnI GAANNNNTTC 1 cut(s) 2238
XspI CTAG 8 cut(s) 624, 648, 975, 1130, 1812, 2057, 2207, 2552
Zsp2I ATGCAT 1 cut(s) 2187
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.