Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0014352

Physical Location & Seq

Genomic Coordinates Reverse (-)

320770 .. 322236

Gene Structure 1467 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1467 bp

ATGGCGTTAACCAAATCAACCCTCCATTTCCACCGCTTTCTCTCTCCCACTCCGCTGCGAATTCTCAAGCCCTACTCTCTCTCTTCAGCTTCAGAAGCACCTCTTCAAGAGAACGACACCCCAGACGACGATTCCCAACCTGCCCCTGCCCCCTACCTGTCGGCCGACGAAACCCTAATTGCCGACAAATTCCACTCTCTAATCAAAGATCACCACCGCAATAACCCCAACCCGAATCCCAACCCCACTCCCCCGAACCCCACCTTCACGATCCCTGCTCTCTCGCAAGACTTCTCCCAAATCTCCGCCGTCCATTCAGTATCTCCTTCCGACGTCCGCCGCGTTATCGAAAAGTGTGGCGGCGTCCGCCACGGCATCCCTCTGGTCCAGGCAGTTGCTTTTTTCAACTGGGCCACGGCCCGCGACGGGTTCGAGCAGAAGTCGGAGCCATACAACGAGATGGTCGACCTCGCCGGAAAGGTGAGGCAGTTCGATTTGGCTTGGCATGTGATCGACCTGATGAAAGCACGGAATGTTGAAATTACGGTCGAGACCTTCTCGATTCTTGTCAGGCGGTACGTGAGGGCCGGATTGGCTGCGGAGGCGGTGCACGCGTTTAATCGTATGGAGGAGTACGGTTGCAAGCCTGATAGGATGGCATTCTCGGTAGTGATTGGGATTCTGTGCAAGAAGAGAAGGGCCAGTGAAGCGCAGTCGTTTTTCGATAGCTTGAAGCATAAATTTGAAGTTGATGTTGTTCTGTACACTAGCTTGGTTAATGGCTGGTGTCGAGCTGGTAATATCTCGGAGGCTGAGAGGGTGTTTCGGGACATGAAGGCAGCTGGGATCATGCCGAATGTGTATACTTACAGCATTGTGATCGATGGTTTGTGTAGGTGCGGCCAAATTACGCGCGCCCATGATGTTTTCGCGGAGATGATTGATGCCGGTTGCCAGCCGAATTCGATCACTTTCAATAATCTGATGAGGGTTCATGTGAAAGCTGGCCGGACTGAGAAGGTGTCGCAGGTTTATAATCAGATGAAGAGGCTGGGATGCAATGCGGATGCCATTACTTATAATTTTCTTATAGAGTGTCATTGTAAGGACGAGAATCTTGAAGATGCAGTTAAGGTGCTCGACCTGATGGTTAAGAAAGGCTGCACCCCGAATGCATCGAGTTTCAATCCCATATTTCGGTGCATTGCGAAGTTGAAGGATGTGAACGGTGCTCACAGAATGTATGCTAAGATGAAGGAGGTGAAGTGCGAGTTGAACACGGTGACCTACAATATATTAATGCAGATGTTTGCTGAGTCTAAATCTACTCATATGGTGCTGAAGCTGAAGAGGGAAATGGATGAGAACCAAGTCGAGCCGAACGTGAACACGTACAAGGTCTTGATCGATCCATGTACTGTGGAATGGGGCATTGGAACAATGCCTACAGGTTTTGCAGGGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

489

Amino Acids

54.86

Weight (kDa)

8.12

Isoelectric Point (pI)

35.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	151 - 193	8.6e-06	PPR repeat family
TPR_24	PF23276	156 - 277	1.5e-09	Fungal tetratrico peptide repeats
PPR_3	PF13812	170 - 228	1.2e-06	Pentatricopeptide repeat domain
PPR_3	PF13812	247 - 294	1.2e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	249 - 279	2e-10	PPR repeat
PPR_2	PF13041	251 - 299	2.6e-18	PPR repeat family
PPR	PF01535	253 - 283	3.3e-07	PPR repeat
PPR_long	PF17177	253 - 349	2.7e-09	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	282 - 313	6.3e-11	PPR repeat
PPR	PF01535	288 - 318	7.5e-07	PPR repeat
PPR_2	PF13041	292 - 330	3.8e-10	PPR repeat family
PPR_2	PF13041	320 - 369	6.7e-14	PPR repeat family
TPR_24	PF23276	334 - 448	6.7e-12	Fungal tetratrico peptide repeats
PPR_long	PF17177	340 - 468	1.1e-08	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	344 - 402	1.2e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	352 - 384	1.1e-09	PPR repeat
PPR_2	PF13041	356 - 404	3.5e-12	PPR repeat family
PPR	PF01535	358 - 388	7.4e-07	PPR repeat
PPR_2	PF13041	394 - 438	1.5e-08	PPR repeat family
PPR_3	PF13812	416 - 472	6.8e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	426 - 471	8.5e-11	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0014352)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20300
fragaria_vesca	FvH4_2g37970
prunus_persica	Prupe.1G359600_v2.0.a1
pyrus_communis	pycom08g00640 pycom15g00550
rosa_chinensis	RchiOBHm_Chr6g0303651
rosa_laevigata	RLG00000011063
rosa_multiflora	Rmu_co8419065.1_g000001 Rmu_sc0013443.1_g000006 Rmu_ssc0000114.1_g000016
rosa_roxburghii	Rroxscaffold_7G00164520
rosa_rugosa	Rorug06G0323400
rosa_samantha	Rh6AG437700 Rh6BG465400 Rh6CG449800 Rh6DG436600
rosa_wichuraiana	Rw6G037890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1035, 1080
AatII	GACGTC	1 cut(s)	336
Acc36I	ACCTGC	2 cut(s)	148, 1018
AccI	GTMKAC	2 cut(s)	465, 863
AccII	CGCG	6 cut(s)	342, 423, 614, 913, 915, 932
AclWI	GGATC	3 cut(s)	265, 854, 1403
AcoI	YGGCCR	3 cut(s)	162, 901, 1006
AcsI	RAATTY	4 cut(s)	60, 188, 740, 961
AcuI	CTGAAG	4 cut(s)	69, 75, 1361, 1367
AcyI	GRCGYC	2 cut(s)	333, 363
AfaI	GTAC	5 cut(s)	578, 635, 764, 1394, 1417
AfiI	CCNNNNNNNGG	2 cut(s)	426, 1197
AflIII	ACRYGT	2 cut(s)	612, 1389
AjnI	CCWGG	1 cut(s)	387
AjuI	GAANNNNNNNTTGG	2 cut(s)	1416, 1448
AluBI	AGCT	7 cut(s)	89, 729, 771, 794, 842, 1004, 1345
AluI	AGCT	7 cut(s)	89, 729, 771, 794, 842, 1004, 1345
Alw21I	GWGCWC	3 cut(s)	612, 1140, 1234
Alw26I	GTCTC	1 cut(s)	545
Alw44I	GTGCAC	1 cut(s)	608
AlwI	GGATC	3 cut(s)	265, 854, 1403
AoxI	GGCC	7 cut(s)	162, 411, 417, 585, 699, 901, 1006
ApaLI	GTGCAC	1 cut(s)	608
ApeKI	GCWGC	4 cut(s)	55, 596, 839, 1161
ApoI	RAATTY	4 cut(s)	60, 188, 740, 961
AseI	ATTAAT	1 cut(s)	1298
AspLEI	GCGC	3 cut(s)	712, 915, 917
AspS9I	GGNCC	5 cut(s)	385, 411, 418, 585, 699
AsuHPI	GGTGA	4 cut(s)	203, 493, 1273, 1294
AvaII	GGWCC	1 cut(s)	385
BaeGI	GKGCMC	1 cut(s)	612
Bbv12I	GWGCWC	3 cut(s)	612, 1140, 1234
BbvI	GCAGC	4 cut(s)	42, 583, 851, 1148
BccI	CCATC	4 cut(s)	454, 649, 878, 1141
BceAI	ACGGC	3 cut(s)	293, 388, 432
BcgI	CGANNNNNNTGC	2 cut(s)	862, 896
BciT130I	CCWGG	1 cut(s)	389
BcoDI	GTCTC	1 cut(s)	545
BfaI	CTAG	1 cut(s)	768
BfmI	CTRYAG	1 cut(s)	1446
BfuAI	ACCTGC	2 cut(s)	148, 1018
BglI	GCCNNNNNGGC	1 cut(s)	593
BisI	GCNGC	7 cut(s)	56, 340, 361, 597, 840, 901, 1162
BlsI	GCNGC	7 cut(s)	57, 341, 362, 598, 841, 902, 1163
Bme1390I	CCNGG	1 cut(s)	389
Bme18I	GGWCC	1 cut(s)	385
BmgT120I	GGNCC	5 cut(s)	385, 411, 418, 585, 699
BmiI	GGNNCC	1 cut(s)	447
BmrFI	CCNGG	1 cut(s)	389
BmrI	ACTGGG	1 cut(s)	418
BmsI	GCATC	6 cut(s)	384, 934, 1046, 1057, 1114, 1184
BmuI	ACTGGG	1 cut(s)	418
BplI	GAGNNNNNCTC	2 cut(s)	542, 574
BpuEI	CTTGAG	1 cut(s)	50
Bsa29I	ATCGAT	2 cut(s)	882, 1407
BsaAI	YACGTR	2 cut(s)	580, 1392
BsaHI	GRCGYC	2 cut(s)	333, 363
BsaI	GGTCTC	1 cut(s)	545
BsaJI	CCNNGG	2 cut(s)	370, 414
BsaXI	ACNNNNNCTCC	2 cut(s)	1250, 1280
Bsc4I	CCNNNNNNNGG	2 cut(s)	426, 1197
Bse118I	RCCGGY	1 cut(s)	947
Bse1I	ACTGG	2 cut(s)	413, 702
Bse3DI	GCAATG	2 cut(s)	1066, 1203
BseBI	CCWGG	1 cut(s)	389
BseCI	ATCGAT	2 cut(s)	882, 1407
BseDI	CCNNGG	2 cut(s)	370, 414
BseGI	GGATG	6 cut(s)	375, 660, 1061, 1072, 1225, 1366
BseLI	CCNNNNNNNGG	2 cut(s)	426, 1197
BseMI	GCAATG	2 cut(s)	1066, 1203
BseMII	CTCAG	3 cut(s)	804, 1005, 1305
BseNI	ACTGG	2 cut(s)	413, 702
BsePI	GCGCGC	1 cut(s)	913
BseRI	GAGGAG	1 cut(s)	644
BseSI	GKGCMC	1 cut(s)	612
BseX3I	CGGCCG	1 cut(s)	162
BseXI	GCAGC	4 cut(s)	42, 583, 851, 1148
BseYI	CCCAGC	2 cut(s)	842, 1051
BsgI	GTGCAG	1 cut(s)	1147
Bsh1236I	CGCG	6 cut(s)	342, 423, 614, 913, 915, 932
Bsh1285I	CGRYCG	2 cut(s)	165, 549
BshFI	GGCC	7 cut(s)	164, 413, 419, 587, 701, 903, 1008
BshVI	ATCGAT	2 cut(s)	882, 1407
BsiEI	CGRYCG	2 cut(s)	165, 549
BsiHKAI	GWGCWC	3 cut(s)	612, 1140, 1234
BsiSI	CCGG	4 cut(s)	474, 588, 948, 1009
BslFI	GGGAC	1 cut(s)	842
BslI	CCNNNNNNNGG	2 cut(s)	426, 1197
BsmAI	GTCTC	1 cut(s)	545
BsmFI	GGGAC	1 cut(s)	842
BsmI	GAATGC	2 cut(s)	659, 1177
BsnI	GGCC	7 cut(s)	164, 413, 419, 587, 701, 903, 1008
Bso31I	GGTCTC	1 cut(s)	545
Bsp1286I	GDGCHC	3 cut(s)	612, 1140, 1234
Bsp1407I	TGTACA	1 cut(s)	762
Bsp143I	GATC	8 cut(s)	208, 270, 510, 846, 879, 966, 1404, 1408
BspANI	GGCC	7 cut(s)	164, 413, 419, 587, 701, 903, 1008
BspCNI	CTCAG	3 cut(s)	805, 1006, 1306
BspDI	ATCGAT	2 cut(s)	882, 1407
BspFNI	CGCG	6 cut(s)	342, 423, 614, 913, 915, 932
BspLI	GGNNCC	1 cut(s)	447
BspMI	ACCTGC	2 cut(s)	148, 1018
BspPI	GGATC	3 cut(s)	265, 854, 1403
BspTNI	GGTCTC	1 cut(s)	545
BsrDI	GCAATG	2 cut(s)	1066, 1203
BsrFI	RCCGGY	1 cut(s)	947
BsrGI	TGTACA	1 cut(s)	762
BsrI	ACTGG	2 cut(s)	413, 702
BssAI	RCCGGY	1 cut(s)	947
BssECI	CCNNGG	2 cut(s)	370, 414
BssHII	GCGCGC	1 cut(s)	913
BssMI	GATC	8 cut(s)	208, 270, 510, 846, 879, 966, 1404, 1408
BssNAI	GTATAC	1 cut(s)	864
BssNI	GRCGYC	2 cut(s)	333, 363
Bst1107I	GTATAC	1 cut(s)	864
Bst2UI	CCWGG	1 cut(s)	389
Bst4CI	ACNGT	5 cut(s)	547, 638, 1229, 1282, 1420
Bst6I	CTCTTC	5 cut(s)	88, 108, 686, 1040, 1343
BstACI	GRCGYC	2 cut(s)	333, 363
BstAUI	TGTACA	1 cut(s)	762
BstBAI	YACGTR	2 cut(s)	580, 1392
BstC8I	GCNNGC	6 cut(s)	421, 612, 644, 915, 956, 1006
BstDEI	CTNAG	4 cut(s)	813, 1014, 1248, 1314
BstDSI	CCRYGG	2 cut(s)	370, 414
BstEII	GGTNACC	1 cut(s)	1282
BstF5I	GGATG	6 cut(s)	375, 660, 1061, 1072, 1225, 1366
BstFNI	CGCG	6 cut(s)	342, 423, 614, 913, 915, 932
BstHHI	GCGC	3 cut(s)	712, 915, 917
BstKTI	GATC	8 cut(s)	211, 273, 513, 849, 882, 969, 1407, 1411
BstMAI	GTCTC	1 cut(s)	545
BstMBI	GATC	8 cut(s)	208, 270, 510, 846, 879, 966, 1404, 1408
BstMCI	CGRYCG	2 cut(s)	165, 549
BstMWI	GCNNNNNNNGC	6 cut(s)	95, 366, 593, 602, 611, 707
BstNI	CCWGG	1 cut(s)	389
BstNSI	RCATGY	1 cut(s)	509
BstPI	GGTNACC	1 cut(s)	1282
BstSCI	CCNGG	1 cut(s)	387
BstSFI	CTRYAG	1 cut(s)	1446
BstSLI	GKGCMC	1 cut(s)	612
BstUI	CGCG	6 cut(s)	342, 423, 614, 913, 915, 932
BstV1I	GCAGC	4 cut(s)	42, 583, 851, 1148
BstZ17I	GTATAC	1 cut(s)	864
BstZI	CGGCCG	1 cut(s)	162
Bsu15I	ATCGAT	2 cut(s)	882, 1407
BsuRI	GGCC	7 cut(s)	164, 413, 419, 587, 701, 903, 1008
BsuTUI	ATCGAT	2 cut(s)	882, 1407
BtgI	CCRYGG	2 cut(s)	370, 414
BtsCI	GGATG	6 cut(s)	375, 660, 1061, 1072, 1225, 1366
BtsIMutI	CAGTG	1 cut(s)	709
BveI	ACCTGC	2 cut(s)	148, 1018
Cac8I	GCNNGC	6 cut(s)	421, 612, 644, 915, 956, 1006
CfoI	GCGC	3 cut(s)	712, 915, 917
Cfr10I	RCCGGY	1 cut(s)	947
Cfr13I	GGNCC	5 cut(s)	385, 411, 418, 585, 699
ClaI	ATCGAT	2 cut(s)	882, 1407
CseI	GACGC	1 cut(s)	352
Csp6I	GTAC	5 cut(s)	577, 634, 763, 1393, 1416
CviAII	CATG	6 cut(s)	506, 832, 850, 920, 995, 1413
CviQI	GTAC	5 cut(s)	577, 634, 763, 1393, 1416
DdeI	CTNAG	4 cut(s)	813, 1014, 1248, 1314
DpnI	GATC	8 cut(s)	210, 272, 512, 848, 881, 968, 1406, 1410
DpnII	GATC	8 cut(s)	208, 270, 510, 846, 879, 966, 1404, 1408
EaeI	YGGCCR	3 cut(s)	162, 901, 1006
EagI	CGGCCG	1 cut(s)	162
Eam1104I	CTCTTC	5 cut(s)	88, 108, 686, 1040, 1343
EarI	CTCTTC	5 cut(s)	88, 108, 686, 1040, 1343
EciI	GGCGGA	3 cut(s)	295, 326, 356
EclXI	CGGCCG	1 cut(s)	162
Eco31I	GGTCTC	1 cut(s)	545
Eco47I	GGWCC	1 cut(s)	385
Eco52I	CGGCCG	1 cut(s)	162
Eco57I	CTGAAG	4 cut(s)	69, 75, 1361, 1367
Eco91I	GGTNACC	1 cut(s)	1282
EcoO65I	GGTNACC	1 cut(s)	1282
EcoRI	GAATTC	2 cut(s)	60, 961
EcoRII	CCWGG	1 cut(s)	387
EcoT22I	ATGCAT	1 cut(s)	1177
FaeI	CATG	6 cut(s)	509, 835, 853, 923, 998, 1416
FalI	AAGNNNNNCTT	2 cut(s)	87, 119
FaqI	GGGAC	1 cut(s)	842
FatI	CATG	6 cut(s)	505, 831, 849, 919, 994, 1412
FauI	CCCGC	1 cut(s)	428
FauNDI	CATATG	1 cut(s)	1332
FblI	GTMKAC	2 cut(s)	465, 863
Fnu4HI	GCNGC	7 cut(s)	56, 340, 361, 597, 840, 901, 1162
FokI	GGATG	6 cut(s)	362, 667, 1068, 1079, 1232, 1373
Fsp4HI	GCNGC	7 cut(s)	56, 340, 361, 597, 840, 901, 1162
FspBI	CTAG	1 cut(s)	768
GlaI	GCGC	3 cut(s)	711, 914, 916
GluI	GCNGC	7 cut(s)	56, 340, 361, 597, 840, 901, 1162
GsaI	CCCAGC	2 cut(s)	846, 1055
HaeIII	GGCC	7 cut(s)	164, 413, 419, 587, 701, 903, 1008
HapII	CCGG	4 cut(s)	474, 588, 948, 1009
HgaI	GACGC	1 cut(s)	352
HhaI	GCGC	3 cut(s)	712, 915, 917
Hin1I	GRCGYC	2 cut(s)	333, 363
Hin1II	CATG	6 cut(s)	509, 835, 853, 923, 998, 1416
Hin6I	GCGC	3 cut(s)	710, 913, 915
HinP1I	GCGC	3 cut(s)	710, 913, 915
HincII	GTYRAC	2 cut(s)	9, 466
HindII	GTYRAC	2 cut(s)	9, 466
HinfI	GANTC	6 cut(s)	131, 235, 562, 679, 1114, 1316
HpaI	GTTAAC	1 cut(s)	9
HpaII	CCGG	4 cut(s)	474, 588, 948, 1009
HphI	GGTGA	4 cut(s)	203, 493, 1273, 1294
Hpy166II	GTNNAC	7 cut(s)	9, 466, 610, 765, 864, 1225, 1387
Hpy188I	TCNGA	6 cut(s)	94, 331, 445, 808, 984, 1041
Hpy188III	TCNNGA	7 cut(s)	107, 268, 550, 559, 827, 1118, 1402
Hpy8I	GTNNAC	7 cut(s)	9, 466, 610, 765, 864, 1225, 1387
Hpy99I	CGWCG	4 cut(s)	131, 170, 335, 428
HpyAV	CCTTC	8 cut(s)	274, 336, 565, 690, 829, 1012, 1210, 1249
HpyCH4III	ACNGT	5 cut(s)	547, 638, 1229, 1282, 1420
HpyCH4IV	ACGT	4 cut(s)	333, 579, 1383, 1391
HpyF10VI	GCNNNNNNNGC	6 cut(s)	95, 366, 593, 602, 611, 707
HpyF3I	CTNAG	4 cut(s)	813, 1014, 1248, 1314
HpySE526I	ACGT	4 cut(s)	333, 579, 1383, 1391
Hsp92I	GRCGYC	2 cut(s)	333, 363
Hsp92II	CATG	6 cut(s)	509, 835, 853, 923, 998, 1416
HspAI	GCGC	3 cut(s)	710, 913, 915
KspAI	GTTAAC	1 cut(s)	9
Kzo9I	GATC	8 cut(s)	208, 270, 510, 846, 879, 966, 1404, 1408
LmnI	GCTCC	1 cut(s)	445
Lsp1109I	GCAGC	4 cut(s)	42, 583, 851, 1148
LweI	GCATC	6 cut(s)	384, 934, 1046, 1057, 1114, 1184
MaeI	CTAG	1 cut(s)	768
MaeII	ACGT	4 cut(s)	333, 579, 1383, 1391
MaeIII	GTNAC	1 cut(s)	1282
MalI	GATC	8 cut(s)	210, 272, 512, 848, 881, 968, 1406, 1410
MboI	GATC	8 cut(s)	208, 270, 510, 846, 879, 966, 1404, 1408
MboII	GAAGA	6 cut(s)	75, 95, 703, 1057, 1133, 1360
MhlI	GDGCHC	3 cut(s)	612, 1140, 1234
MluCI	AATT	8 cut(s)	60, 177, 188, 540, 740, 906, 961, 1081
MluI	ACGCGT	1 cut(s)	612
MlyI	GAGTC	1 cut(s)	1325
MmeI	TCCRAC	2 cut(s)	354, 423
Mph1103I	ATGCAT	1 cut(s)	1177
MseI	TTAA	6 cut(s)	8, 618, 777, 1131, 1152, 1298
MspA1I	CMGCKG	2 cut(s)	55, 842
MspI	CCGG	4 cut(s)	474, 588, 948, 1009
MspR9I	CCNGG	1 cut(s)	389
Mva1269I	GAATGC	2 cut(s)	659, 1177
MvaI	CCWGG	1 cut(s)	389
MvnI	CGCG	6 cut(s)	342, 423, 614, 913, 915, 932
MwoI	GCNNNNNNNGC	6 cut(s)	95, 366, 593, 602, 611, 707
NdeI	CATATG	1 cut(s)	1332
NdeII	GATC	8 cut(s)	208, 270, 510, 846, 879, 966, 1404, 1408
NlaIII	CATG	6 cut(s)	509, 835, 853, 923, 998, 1416
NlaIV	GGNNCC	1 cut(s)	447
NmuCI	GTSAC	1 cut(s)	1282
NsiI	ATGCAT	1 cut(s)	1177
NspI	RCATGY	1 cut(s)	509
PauI	GCGCGC	1 cut(s)	913
PcsI	WCGNNNNNNNCGW	3 cut(s)	339, 462, 1380
PctI	GAATGC	2 cut(s)	659, 1177
PfeI	GAWTC	5 cut(s)	131, 235, 562, 679, 1114
PkrI	GCNGC	7 cut(s)	57, 341, 362, 598, 841, 902, 1163
PleI	GAGTC	1 cut(s)	1324
PpsI	GAGTC	1 cut(s)	1324
Ppu21I	YACGTR	2 cut(s)	580, 1392
PshBI	ATTAAT	1 cut(s)	1298
PsiI	TTATAA	2 cut(s)	1035, 1080
Psp6I	CCWGG	1 cut(s)	387
PspEI	GGTNACC	1 cut(s)	1282
PspFI	CCCAGC	2 cut(s)	842, 1051
PspGI	CCWGG	1 cut(s)	387
PspN4I	GGNNCC	1 cut(s)	447
PspPI	GGNCC	5 cut(s)	385, 411, 418, 585, 699
PsrI	GAACNNNNNNTAC	2 cut(s)	1429, 1461
PteI	GCGCGC	1 cut(s)	913
PvuII	CAGCTG	1 cut(s)	842
RsaI	GTAC	5 cut(s)	578, 635, 764, 1394, 1417
RsaNI	GTAC	5 cut(s)	577, 634, 763, 1393, 1416
SalI	GTCGAC	1 cut(s)	464
SaqAI	TTAA	6 cut(s)	8, 618, 777, 1131, 1152, 1298
SatI	GCNGC	7 cut(s)	56, 340, 361, 597, 840, 901, 1162
Sau3AI	GATC	8 cut(s)	208, 270, 510, 846, 879, 966, 1404, 1408
Sau96I	GGNCC	5 cut(s)	385, 411, 418, 585, 699
SchI	GAGTC	1 cut(s)	1325
ScrFI	CCNGG	1 cut(s)	389
SduI	GDGCHC	3 cut(s)	612, 1140, 1234
SfaNI	GCATC	6 cut(s)	384, 934, 1046, 1057, 1114, 1184
SfcI	CTRYAG	1 cut(s)	1446
SinI	GGWCC	1 cut(s)	385
SmlI	CTYRAG	1 cut(s)	65
SmoI	CTYRAG	1 cut(s)	65
Sse9I	AATT	8 cut(s)	60, 177, 188, 540, 740, 906, 961, 1081
SspMI	CTAG	1 cut(s)	768
StyD4I	CCNGG	1 cut(s)	387
TaaI	ACNGT	5 cut(s)	547, 638, 1229, 1282, 1420
TaiI	ACGT	4 cut(s)	336, 582, 1386, 1394
TasI	AATT	8 cut(s)	60, 177, 188, 540, 740, 906, 961, 1081
TatI	WGTACW	2 cut(s)	762, 1415
TauI	GCSGC	3 cut(s)	342, 363, 903
TfiI	GAWTC	5 cut(s)	131, 235, 562, 679, 1114
Tru1I	TTAA	6 cut(s)	8, 618, 777, 1131, 1152, 1298
Tru9I	TTAA	6 cut(s)	8, 618, 777, 1131, 1152, 1298
TscAI	CASTG	1 cut(s)	709
TseFI	GTSAC	1 cut(s)	1282
TseI	GCWGC	4 cut(s)	55, 596, 839, 1161
Tsp45I	GTSAC	1 cut(s)	1282
TspDTI	ATGAA	5 cut(s)	536, 848, 983, 1058, 1268
TspGWI	ACGGA	1 cut(s)	544
TspRI	CASTG	1 cut(s)	709
VneI	GTGCAC	1 cut(s)	608
VpaK11BI	GGWCC	1 cut(s)	385
VspI	ATTAAT	1 cut(s)	1298
XapI	RAATTY	4 cut(s)	60, 188, 740, 961
XceI	RCATGY	1 cut(s)	509
XmiI	GTMKAC	2 cut(s)	465, 863
XspI	CTAG	1 cut(s)	768
ZraI	GACGTC	1 cut(s)	334
Zsp2I	ATGCAT	1 cut(s)	1177

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.