Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0008061

Physical Location & Seq

Genomic Coordinates Reverse (-)

3897910 .. 3909425

Gene Structure 11516 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2733 bp

ATGATTGGAATATTGTATGCAGTGCTTCCGGAAGAGAAAAGGGCTTCATTCTGGAAATTGGTTTTGAAACAGTTTGATGATTTGCTTGTAAAGATATTGATTGTTGCGGCACTTGTTTCATTTATTCTGGCTTTGATTAATGGAGATACGGGCTTAACAGCTTTTTTGGAGCCTTCGGTTATTCTCATGATATTGGCTGCAAATGCTGCAGTAGGAGTGATTACAGAAACCAATGCTGAAAAGGCACTTGAGGAGCTACGTGCATACCAAGCTGATATCGCGACTGTGCTGCGGAATGGTTGCTTTTCCATACTTCCAGCAACAGAGCTTGTCCCAGGTGATGTTGTAGAAGTGGCTGTGGGAGGCAAAATTCCAGCTGATATGAGAATGATTGAGATGCTAAGTAATCAATTACGTGTTGATCAGGCAATTCTTACAGGTGAGAGTTGCTCTGTTGAAAAAGAGCTTGAATCCACTACTGCAACAAATGCTGTATATCAAGACAAGACAAGTATTCTTTTCTCGGGTACAGTAGTCGTGGCTGGTAGGGCTAGAGCTGTCGTAGTAGGAGTTGGAACACAGACTGCTATGGGCGGCATACACGATTCAATGTTACGAACAGAAGATGAAGCTACACCATTGAAAAAGAAGCTGGATGAATTTGGTACTTTCTTGGCCAAGGTTATTGCTGGCATATGCGTACTGGTATGGATTGTAAATATTGGTCACTTTCGTGACCCTGCTCATGGTGGGTTCTTGCGTGGTGCAATTCATTACTTCAAGATTGCAGTCGCACTTGCAGTTGCAGCAATCCCAGAAGGACTTCCAGCTGTTGTTACAACTTGTTTGGCTCTTGGAACAAAACGAATGGCTCGATTGAATGCCATTGTAAGGTCTTTGCCATCTGTTGAGACTTTAGGCTGCACTACGGTAATCTGCAGTGACAAAACTGGAACCCTGACAACCAATATGATGTCTGTCTCGAAGGTTTGTGTGCTTCATACTGTACAGCATGCTCCTGTTATTTCCGAATACAGTGTCAGTGGGACAACATATGCACCGGAAGGCATTATTTTTGACAGTACTGGGCATCAGATTGAACTTCCAGCTCAGACGCCTTGTCTTCTTCACATAGCAATGTGTTCAGCACTATGCAATGAGTCTATCCTGCAATATAATCCTGATAAGGGCAACTATGAAAAAATTGGCGAGTCAACTGAAGTAGCCCTCCGTGTTCTTGCAGAGAAGATTGGTCTTCCTGGCTTTGATTCTATGCCTTCTTCTCTGAATATGCTGAGCAAGCATGAACGTGCATCTTACTGTAATCACTACTGGGAGGACCATTTTAAAAAGATTTCTGTTGCAGATTTTACTCGTGACCGGAAGATGATGAGTGTCCTTTGCAGCCGAAACCAGTTGCAAATTATGTTTTCAAAAGGTGCTCCAGAGAGTATTATTTCTAGATGCACAAGTATTCTGTGCAATGATGATGGTTCTGCTATACCACTAACTACTAGTATTCGGGCTGAGCTGGAATCAAGGTTCCGTAGTTTTGCAGGGAAGGAAACACTAAGATGCTTGGCCCTGGCCTTTAAGCGGATGCCCATGGGTCTGCAGAGTCTCGCCCATAATGATGAGAATGATCTAACATTCATTGGGTTGGTTGGAATGCTTGATCCACCAAGAGAAGAAGTGAGAAACGCGATGCTTTCATGCATGACCGCTGGCATACGTGTTATAGTTGTAACTGGGGATAACAAGTCAACAGCTGAATCACTTTGCCGCAAGATAGGGGCTTTTGATCACTTAGAAGATCTTGCTGGACACTCCTACACTGCGACTGAGTTTGACGAATTACCAGCATTGCAGAAAACTCTGGCATTGCAACGCATGGCACTATTCACTAGGGTTGAACCTTCTCATAAAAGGATGCTGGTTGAAGCCTTGCGACACCAAAACGAAGTGGTGGCAATGACTGGTGATGGTGTTAACGATGCACCTGCACTTAAAAAGGCAGATATTGGAATTGCCATGGGTTCAGGAACAGCTGTTGCCAAGAGTGCTTCAGATATGGTTTTGGCTGACGATAATTTCGCTACTATTGTTGCGGCTATTGCAGAGGGAAGGGCTATATACAACAACACGAAGCAATTCATCAGATATATGATCTCTTCAAATATTGGTGAAGTAGTTTGTATATTTGTGGCAGCTGTACTTGGCATTCCTGATACTCTGGCCCCTGTCCAGCTGCTCTGGGTCAACTTAGTTACTGATGGATTGCCTGCCACTGCTATTGGTTTTAATAAGCAAGATTCTGATGTGATGAAGGTTAAACCTCGGAAGGTCAACGAAGCAGTTGTTTCTGGATGGCTGTTTTTTCGTTATTTGGTAATCGGAGCTTATGTTGGGGTTGCCACGGTTGCGGGATTTATATGGTGGTTTGTTTACTCTGATAGTGGTCCTCAACTGCCATATTCTGAATTGATGAATTTTGACTCATGCTCAACAAGGGAGACAACTTATCCATGCAGTATATTTGATGATCGCCATCCATCAACTGTTACGCCATTATCTTGGGCTGACTGGACTGTTGTGCTATACCTTTCATTTCCCGTTATTATCATCGATGAAGTGCTAAAGTTCTTCTCAAGAAGTTCCACTGGCATGCGATGGTTCAATTTCCGGTGGAGGAGGCCTGATTTACTGCCAAAAAGGGAATCGCGTGACAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000041 GO:0003674 GO:0003824 GO:0005215 GO:0005384 GO:0005388 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006828 GO:0007275 GO:0008150 GO:0008324 GO:0012505 GO:0015075 GO:0015085 GO:0015318 GO:0015399 GO:0015405 GO:0015410 GO:0015662 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022622 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030001 GO:0031410 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0034220 GO:0042592 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0046915 GO:0048364 GO:0048731 GO:0048856 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0055065 GO:0055071 GO:0055076 GO:0055080 GO:0055085 GO:0065007 GO:0065008 GO:0070588 GO:0070838 GO:0071421 GO:0072511 GO:0090662 GO:0097708 GO:0098655 GO:0098660 GO:0098662 GO:0098771 GO:0098791 GO:0099131 GO:0099132 GO:0099402

KEGG Pathways

Metabolic & Signaling

ko04020 ko04022 ko04972 ko05010 map04020 map04022 map04972 map05010

Pfam Domains

Protein Families

Cation_ATPase Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase Hydrolase_3

Protein Analysis

911

Amino Acids

99.41

Weight (kDa)

6.01

Isoelectric Point (pI)

39.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cation_ATPase_N	PF00690	9 - 40	3.8e-07	Cation transporter/ATPase, N-terminus
E1-E2_ATPase	PF00122	90 - 203	4.8e-22	P-type ATPase actuator domain
Cation_ATPase	PF13246	377 - 564	2.2e-40	P-type ATPase, cytoplasmic domain N
Hydrolase	PF00702	548 - 673	1.6e-13	haloacid dehalogenase-like hydrolase
Hydrolase_3	PF08282	645 - 704	3.1e-06	haloacid dehalogenase-like hydrolase
Cation_ATPase_C	PF00689	744 - 820	7.8e-21	Cation transporting ATPase, C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0008061)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10130
fragaria_vesca	FvH4_2g32870 FvH4_2g32870 FvH4_2g32870
malus_domestica	MD08G1080200.v1.1 MD15G1067300.v1.1
prunus_persica	Prupe.1G421100_v2.0.a1 Prupe.1G421100_v2.0.a1 Prupe.1G421100_v2.0.a1 Prupe.1G421100_v2.0.a1 Prupe.1G421100_v2.0.a1
pyrus_communis	pycom08g06620 pycom15g06380
rosa_chinensis	RchiOBHm_Chr6g0309841
rosa_laevigata	RLG00000010530
rosa_multiflora	Rmu_ssc0000373.1_g000002
rosa_roxburghii	Rroxscaffold_7G00159130
rosa_rugosa	Rorug06G0375200 Rorug06G0375300
rosa_samantha	Rh6AG488700 Rh6BG498200 Rh6CG503000 Rh6DG489200
rosa_wichuraiana	Rw6G042560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2008
Acc36I	ACCTGC	1 cut(s)	2008
AccII	CGCG	3 cut(s)	281, 1703, 2722
AccIII	TCCGGA	1 cut(s)	28
AciI	CCGC	8 cut(s)	107, 292, 594, 1597, 1722, 1783, 2108, 2423
AclWI	GGATC	1 cut(s)	1670
AcoI	YGGCCR	1 cut(s)	675
AcsI	RAATTY	3 cut(s)	369, 659, 2488
AcuI	CTGAAG	2 cut(s)	1239, 2049
AcyI	GRCGYC	1 cut(s)	1115
AfaI	GTAC	6 cut(s)	529, 667, 702, 1008, 1084, 2214
AfiI	CCNNNNNNNGG	4 cut(s)	746, 891, 1187, 1596
AflIII	ACRYGT	2 cut(s)	415, 1732
AhdI	GACNNNNNGTC	1 cut(s)	1119
AhlI	ACTAGT	1 cut(s)	1514
AjnI	CCWGG	3 cut(s)	334, 1258, 1584
AleI	CACNNNNGTG	1 cut(s)	732
AloI	GAACNNNNNNTCC	2 cut(s)	1526, 1558
Alw21I	GWGCWC	1 cut(s)	1444
Alw26I	GTCTC	4 cut(s)	905, 985, 1625, 2507
AlwI	GGATC	1 cut(s)	1670
Ama87I	CYCGRG	1 cut(s)	523
Aor13HI	TCCGGA	1 cut(s)	28
AoxI	GGCC	5 cut(s)	675, 1581, 1587, 2235, 2693
ApeKI	GCWGC	8 cut(s)	197, 206, 289, 806, 921, 1404, 2207, 2248
ApoI	RAATTY	3 cut(s)	369, 659, 2488
ArsI	GACNNNNNNTTYG	4 cut(s)	1023, 1055, 2075, 2107
AseI	ATTAAT	1 cut(s)	138
Asp700I	GAANNNNTTC	2 cut(s)	822, 2150
AspS9I	GGNCC	4 cut(s)	1339, 1582, 2236, 2459
AsuHPI	GGTGA	4 cut(s)	350, 452, 1991, 2195
AvaI	CYCGRG	1 cut(s)	523
AvaII	GGWCC	2 cut(s)	1339, 2459
BaeI	ACNNNNGTAYC	2 cut(s)	519, 552
BalI	TGGCCA	1 cut(s)	677
BauI	CACGAG	1 cut(s)	1374
BbsI	GAAGAC	2 cut(s)	1115, 1247
Bbv12I	GWGCWC	1 cut(s)	1444
BbvI	GCAGC	8 cut(s)	184, 193, 276, 818, 908, 1416, 2219, 2235
BccI	CCATC	8 cut(s)	910, 1484, 1976, 2267, 2361, 2556, 2560, 2664
BcgI	CGANNNNNNTGC	4 cut(s)	271, 305, 1982, 2016
BciT130I	CCWGG	3 cut(s)	336, 1260, 1586
BclI	TGATCA	2 cut(s)	421, 1801
BcoDI	GTCTC	4 cut(s)	905, 985, 1625, 2507
BcuI	ACTAGT	1 cut(s)	1514
BfaI	CTAG	4 cut(s)	552, 1461, 1515, 1905
BfmI	CTRYAG	3 cut(s)	207, 937, 1613
BfuAI	ACCTGC	1 cut(s)	2008
BglII	AGATCT	1 cut(s)	1813
BlpI	GCTNAGC	2 cut(s)	1295, 1527
BmcAI	AGTACT	1 cut(s)	1084
Bme1390I	CCNGG	3 cut(s)	336, 1260, 1586
Bme18I	GGWCC	2 cut(s)	1339, 2459
BmeRI	GACNNNNNGTC	1 cut(s)	1119
BmeT110I	CYCGRG	1 cut(s)	523
BmgT120I	GGNCC	4 cut(s)	1339, 1582, 2236, 2459
BmiI	GGNNCC	4 cut(s)	171, 955, 1544, 2238
BmrFI	CCNGG	3 cut(s)	336, 1260, 1586
BmrI	ACTGGG	3 cut(s)	1095, 1342, 1758
BmsI	GCATC	9 cut(s)	387, 1099, 1322, 1454, 1565, 1590, 1695, 1920, 1984
BmuI	ACTGGG	3 cut(s)	1095, 1342, 1758
BpiI	GAAGAC	2 cut(s)	1115, 1247
BplI	GAGNNNNNCTC	2 cut(s)	434, 466
BpmI	CTGGAG	1 cut(s)	1428
Bpu1102I	GCTNAGC	2 cut(s)	1295, 1527
BpuEI	CTTGAG	2 cut(s)	269, 2632
Bsa29I	ATCGAT	1 cut(s)	2625
BsaAI	YACGTR	3 cut(s)	260, 416, 1733
BsaBI	GATNNNNATC	1 cut(s)	2547
BsaHI	GRCGYC	1 cut(s)	1115
BsaJI	CCNNGG	7 cut(s)	334, 678, 1584, 1605, 2031, 2336, 2415
BsaWI	WCCGGW	4 cut(s)	28, 1060, 1380, 2682
BsaXI	ACNNNNNCTCC	2 cut(s)	2388, 2418
Bsc4I	CCNNNNNNNGG	4 cut(s)	746, 891, 1187, 1596
Bse1I	ACTGG	9 cut(s)	708, 955, 1090, 1337, 1414, 1753, 1981, 2588, 2665
Bse3DI	GCAATG	6 cut(s)	1143, 1162, 1489, 1862, 1880, 1977
Bse8I	GATNNNNATC	1 cut(s)	2547
BseAI	TCCGGA	1 cut(s)	28
BseBI	CCWGG	3 cut(s)	336, 1260, 1586
BseCI	ATCGAT	1 cut(s)	2625
BseDI	CCNNGG	7 cut(s)	334, 678, 1584, 1605, 2031, 2336, 2415
BseGI	GGATG	5 cut(s)	661, 1605, 1935, 2372, 2548
BseJI	GATNNNNATC	1 cut(s)	2547
BseLI	CCNNNNNNNGG	4 cut(s)	746, 891, 1187, 1596
BseMI	GCAATG	6 cut(s)	1143, 1162, 1489, 1862, 1880, 1977
BseMII	CTCAG	4 cut(s)	1124, 1286, 1518, 1833
BseNI	ACTGG	9 cut(s)	708, 955, 1090, 1337, 1414, 1753, 1981, 2588, 2665
BseRI	GAGGAG	2 cut(s)	266, 2704
BseXI	GCAGC	8 cut(s)	184, 193, 276, 818, 908, 1416, 2219, 2235
BsgI	GTGCAG	2 cut(s)	907, 1986
Bsh1236I	CGCG	3 cut(s)	281, 1703, 2722
BshFI	GGCC	5 cut(s)	677, 1583, 1589, 2237, 2695
BshVI	ATCGAT	1 cut(s)	2625
BsiHKAI	GWGCWC	1 cut(s)	1444
BsiHKCI	CYCGRG	1 cut(s)	523
BsiSI	CCGG	4 cut(s)	29, 1061, 1381, 2683
BslFI	GGGAC	2 cut(s)	317, 1060
BslI	CCNNNNNNNGG	4 cut(s)	746, 891, 1187, 1596
BsmAI	GTCTC	4 cut(s)	905, 985, 1625, 2507
BsmFI	GGGAC	2 cut(s)	317, 1060
BsmI	GAATGC	3 cut(s)	886, 1674, 2220
BsnI	GGCC	5 cut(s)	677, 1583, 1589, 2237, 2695
BsoBI	CYCGRG	1 cut(s)	523
Bsp1286I	GDGCHC	1 cut(s)	1444
Bsp13I	TCCGGA	1 cut(s)	28
Bsp1407I	TGTACA	1 cut(s)	1006
Bsp143I	GATC	7 cut(s)	421, 1642, 1675, 1801, 1813, 2166, 2542
Bsp1720I	GCTNAGC	2 cut(s)	1295, 1527
Bsp19I	CCATGG	2 cut(s)	1605, 2031
Bsp68I	TCGCGA	1 cut(s)	281
BspACI	CCGC	8 cut(s)	107, 292, 594, 1597, 1722, 1783, 2108, 2423
BspANI	GGCC	5 cut(s)	677, 1583, 1589, 2237, 2695
BspCNI	CTCAG	4 cut(s)	1123, 1287, 1519, 1834
BspDI	ATCGAT	1 cut(s)	2625
BspEI	TCCGGA	1 cut(s)	28
BspFNI	CGCG	3 cut(s)	281, 1703, 2722
BspHI	TCATGA	1 cut(s)	186
BspLI	GGNNCC	4 cut(s)	171, 955, 1544, 2238
BspMAI	CTGCAG	3 cut(s)	211, 941, 1617
BspMI	ACCTGC	1 cut(s)	2008
BspPI	GGATC	1 cut(s)	1670
BsrDI	GCAATG	6 cut(s)	1143, 1162, 1489, 1862, 1880, 1977
BsrGI	TGTACA	1 cut(s)	1006
BsrI	ACTGG	9 cut(s)	708, 955, 1090, 1337, 1414, 1753, 1981, 2588, 2665
BssECI	CCNNGG	7 cut(s)	334, 678, 1584, 1605, 2031, 2336, 2415
BssMI	GATC	7 cut(s)	421, 1642, 1675, 1801, 1813, 2166, 2542
BssNI	GRCGYC	1 cut(s)	1115
BssSI	CACGAG	1 cut(s)	1374
BssT1I	CCWWGG	3 cut(s)	678, 1605, 2031
Bst2BI	CACGAG	1 cut(s)	1374
Bst2UI	CCWGG	3 cut(s)	336, 1260, 1586
Bst6I	CTCTTC	2 cut(s)	27, 2176
BstACI	GRCGYC	1 cut(s)	1115
BstAPI	GCANNNNNTGC	2 cut(s)	206, 488
BstAUI	TGTACA	1 cut(s)	1006
BstBAI	YACGTR	3 cut(s)	260, 416, 1733
BstC8I	GCNNGC	6 cut(s)	691, 1014, 1301, 1726, 2283, 2666
BstDEI	CTNAG	8 cut(s)	401, 1110, 1295, 1527, 1571, 1807, 1842, 2263
BstDSI	CCRYGG	3 cut(s)	1605, 2031, 2415
BstF5I	GGATG	5 cut(s)	661, 1605, 1935, 2372, 2548
BstFNI	CGCG	3 cut(s)	281, 1703, 2722
BstKTI	GATC	7 cut(s)	424, 1645, 1678, 1804, 1816, 2169, 2545
BstMAI	GTCTC	4 cut(s)	905, 985, 1625, 2507
BstMBI	GATC	7 cut(s)	421, 1642, 1675, 1801, 1813, 2166, 2542
BstNI	CCWGG	3 cut(s)	336, 1260, 1586
BstNSI	RCATGY	2 cut(s)	1016, 2668
BstSCI	CCNGG	3 cut(s)	334, 1258, 1584
BstSFI	CTRYAG	3 cut(s)	207, 937, 1613
BstUI	CGCG	3 cut(s)	281, 1703, 2722
BstV1I	GCAGC	8 cut(s)	184, 193, 276, 818, 908, 1416, 2219, 2235
BstV2I	GAAGAC	2 cut(s)	1115, 1247
BstX2I	RGATCY	1 cut(s)	1813
BstXI	CCANNNNNNTGG	1 cut(s)	2574
BstYI	RGATCY	1 cut(s)	1813
Bsu15I	ATCGAT	1 cut(s)	2625
BsuRI	GGCC	5 cut(s)	677, 1583, 1589, 2237, 2695
BsuTUI	ATCGAT	1 cut(s)	2625
BtgI	CCRYGG	3 cut(s)	1605, 2031, 2415
BtgZI	GCGATG	2 cut(s)	1718, 2683
BtsCI	GGATG	5 cut(s)	661, 1605, 1935, 2372, 2548
BtsI	GCAGTG	4 cut(s)	27, 946, 1833, 2286
BtsIMutI	CAGTG	7 cut(s)	27, 946, 1042, 1048, 1833, 2286, 2658
BtuMI	TCGCGA	1 cut(s)	281
BveI	ACCTGC	1 cut(s)	2008
Cac8I	GCNNGC	6 cut(s)	691, 1014, 1301, 1726, 2283, 2666
CciI	TCATGA	1 cut(s)	186
Cfr13I	GGNCC	4 cut(s)	1339, 1582, 2236, 2459
ClaI	ATCGAT	1 cut(s)	2625
CseI	GACGC	1 cut(s)	1123
Csp6I	GTAC	6 cut(s)	528, 666, 701, 1007, 1083, 2213
CspCI	CAANNNNNGTGG	2 cut(s)	2275, 2310
CviQI	GTAC	6 cut(s)	528, 666, 701, 1007, 1083, 2213
DdeI	CTNAG	8 cut(s)	401, 1110, 1295, 1527, 1571, 1807, 1842, 2263
DpnI	GATC	7 cut(s)	423, 1644, 1677, 1803, 1815, 2168, 2544
DpnII	GATC	7 cut(s)	421, 1642, 1675, 1801, 1813, 2166, 2542
DraI	TTTAAA	1 cut(s)	1348
DriI	GACNNNNNGTC	1 cut(s)	1119
EaeI	YGGCCR	1 cut(s)	675
Eam1104I	CTCTTC	2 cut(s)	27, 2176
Eam1105I	GACNNNNNGTC	1 cut(s)	1119
EarI	CTCTTC	2 cut(s)	27, 2176
Eco130I	CCWWGG	3 cut(s)	678, 1605, 2031
Eco147I	AGGCCT	1 cut(s)	2695
Eco32I	GATATC	1 cut(s)	277
Eco47I	GGWCC	2 cut(s)	1339, 2459
Eco57I	CTGAAG	2 cut(s)	1239, 2049
Eco88I	CYCGRG	1 cut(s)	523
EcoRII	CCWGG	3 cut(s)	334, 1258, 1584
EcoRV	GATATC	1 cut(s)	277
EcoT14I	CCWWGG	3 cut(s)	678, 1605, 2031
EcoT22I	ATGCAT	1 cut(s)	1718
ErhI	CCWWGG	3 cut(s)	678, 1605, 2031
FaqI	GGGAC	2 cut(s)	317, 1060
FauI	CCCGC	1 cut(s)	2416
FauNDI	CATATG	2 cut(s)	695, 1054
FbaI	TGATCA	2 cut(s)	421, 1801
FokI	GGATG	5 cut(s)	668, 1612, 1942, 2379, 2535
FspBI	CTAG	4 cut(s)	552, 1461, 1515, 1905
GsuI	CTGGAG	1 cut(s)	1428
HaeIII	GGCC	5 cut(s)	677, 1583, 1589, 2237, 2695
HapII	CCGG	4 cut(s)	29, 1061, 1381, 2683
HgaI	GACGC	1 cut(s)	1123
Hin1I	GRCGYC	1 cut(s)	1115
HincII	GTYRAC	5 cut(s)	1215, 1764, 1990, 2260, 2347
HindII	GTYRAC	5 cut(s)	1215, 1764, 1990, 2260, 2347
HpaI	GTTAAC	1 cut(s)	1990
HpaII	CCGG	4 cut(s)	29, 1061, 1381, 2683
HphI	GGTGA	4 cut(s)	350, 452, 1991, 2195
Hpy166II	GTNNAC	6 cut(s)	1215, 1764, 1990, 2260, 2347, 2446
Hpy8I	GTNNAC	6 cut(s)	1215, 1764, 1990, 2260, 2347, 2446
HpyCH4IV	ACGT	4 cut(s)	259, 415, 1309, 1732
HpyF3I	CTNAG	8 cut(s)	401, 1110, 1295, 1527, 1571, 1807, 1842, 2263
HpySE526I	ACGT	4 cut(s)	259, 415, 1309, 1732
Hsp92I	GRCGYC	1 cut(s)	1115
Kpn2I	TCCGGA	1 cut(s)	28
Ksp22I	TGATCA	2 cut(s)	421, 1801
KspAI	GTTAAC	1 cut(s)	1990
Kzo9I	GATC	7 cut(s)	421, 1642, 1675, 1801, 1813, 2166, 2542
LmnI	GCTCC	5 cut(s)	169, 253, 1021, 1447, 2396
Lsp1109I	GCAGC	8 cut(s)	184, 193, 276, 818, 908, 1416, 2219, 2235
LweI	GCATC	9 cut(s)	387, 1099, 1322, 1454, 1565, 1590, 1695, 1920, 1984
MaeI	CTAG	4 cut(s)	552, 1461, 1515, 1905
MaeII	ACGT	4 cut(s)	259, 415, 1309, 1732
MalI	GATC	7 cut(s)	423, 1644, 1677, 1803, 1815, 2168, 2544
MboI	GATC	7 cut(s)	421, 1642, 1675, 1801, 1813, 2166, 2542
MflI	RGATCY	1 cut(s)	1813
MhlI	GDGCHC	1 cut(s)	1444
MlsI	TGGCCA	1 cut(s)	677
MluNI	TGGCCA	1 cut(s)	677
MlyI	GAGTC	4 cut(s)	1169, 1220, 1627, 2489
MmeI	TCCRAC	2 cut(s)	553, 1645
MnlI	CCTC	9 cut(s)	244, 356, 1238, 1330, 2113, 2346, 2472, 2682, 2685
Mox20I	TGGCCA	1 cut(s)	677
Mph1103I	ATGCAT	1 cut(s)	1718
MroI	TCCGGA	1 cut(s)	28
MroXI	GAANNNNTTC	2 cut(s)	822, 2150
MscI	TGGCCA	1 cut(s)	677
MseI	TTAA	8 cut(s)	138, 155, 1347, 1593, 1989, 2007, 2301, 2331
MslI	CAYNNNNRTG	6 cut(s)	732, 1136, 1308, 1573, 1632, 2663
Msp20I	TGGCCA	1 cut(s)	677
MspA1I	CMGCKG	7 cut(s)	377, 830, 1724, 1769, 2048, 2210, 2248
MspI	CCGG	4 cut(s)	29, 1061, 1381, 2683
MspR9I	CCNGG	3 cut(s)	336, 1260, 1586
Mva1269I	GAATGC	3 cut(s)	886, 1674, 2220
MvaI	CCWGG	3 cut(s)	336, 1260, 1586
MvnI	CGCG	3 cut(s)	281, 1703, 2722
NcoI	CCATGG	2 cut(s)	1605, 2031
NdeI	CATATG	2 cut(s)	695, 1054
NdeII	GATC	7 cut(s)	421, 1642, 1675, 1801, 1813, 2166, 2542
NlaIV	GGNNCC	4 cut(s)	171, 955, 1544, 2238
NmuCI	GTSAC	5 cut(s)	725, 734, 941, 1376, 2723
NruI	TCGCGA	1 cut(s)	281
NsiI	ATGCAT	1 cut(s)	1718
NspI	RCATGY	2 cut(s)	1016, 2668
OliI	CACNNNNGTG	1 cut(s)	732
PaeI	GCATGC	2 cut(s)	1016, 2668
PagI	TCATGA	1 cut(s)	186
PaqCI	CACCTGC	1 cut(s)	2008
PceI	AGGCCT	1 cut(s)	2695
PcsI	WCGNNNNNNNCGW	1 cut(s)	871
PctI	GAATGC	3 cut(s)	886, 1674, 2220
PdmI	GAANNNNTTC	2 cut(s)	822, 2150
PfeI	GAWTC	7 cut(s)	470, 605, 1268, 1535, 1772, 2312, 2717
PleI	GAGTC	4 cut(s)	1168, 1219, 1626, 2489
PpsI	GAGTC	4 cut(s)	1168, 1219, 1626, 2489
Ppu21I	YACGTR	3 cut(s)	260, 416, 1733
PshBI	ATTAAT	1 cut(s)	138
Psp6I	CCWGG	3 cut(s)	334, 1258, 1584
PspGI	CCWGG	3 cut(s)	334, 1258, 1584
PspN4I	GGNNCC	4 cut(s)	171, 955, 1544, 2238
PspPI	GGNCC	4 cut(s)	1339, 1582, 2236, 2459
PstI	CTGCAG	3 cut(s)	211, 941, 1617
PsuI	RGATCY	1 cut(s)	1813
PvuII	CAGCTG	6 cut(s)	377, 830, 1769, 2048, 2210, 2248
RruI	TCGCGA	1 cut(s)	281
RsaI	GTAC	6 cut(s)	529, 667, 702, 1008, 1084, 2214
RsaNI	GTAC	6 cut(s)	528, 666, 701, 1007, 1083, 2213
RseI	CAYNNNNRTG	6 cut(s)	732, 1136, 1308, 1573, 1632, 2663
SaqAI	TTAA	8 cut(s)	138, 155, 1347, 1593, 1989, 2007, 2301, 2331
Sau3AI	GATC	7 cut(s)	421, 1642, 1675, 1801, 1813, 2166, 2542
Sau96I	GGNCC	4 cut(s)	1339, 1582, 2236, 2459
ScaI	AGTACT	1 cut(s)	1084
SchI	GAGTC	4 cut(s)	1169, 1220, 1627, 2489
ScrFI	CCNGG	3 cut(s)	336, 1260, 1586
SduI	GDGCHC	1 cut(s)	1444
SfaNI	GCATC	9 cut(s)	387, 1099, 1322, 1454, 1565, 1590, 1695, 1920, 1984
SfcI	CTRYAG	3 cut(s)	207, 937, 1613
SinI	GGWCC	2 cut(s)	1339, 2459
SmiMI	CAYNNNNRTG	6 cut(s)	732, 1136, 1308, 1573, 1632, 2663
SmlI	CTYRAG	2 cut(s)	248, 2647
SmoI	CTYRAG	2 cut(s)	248, 2647
SpeI	ACTAGT	1 cut(s)	1514
SphI	GCATGC	2 cut(s)	1016, 2668
SseBI	AGGCCT	1 cut(s)	2695
SsiI	CCGC	8 cut(s)	107, 292, 594, 1597, 1722, 1783, 2108, 2423
SspI	AATATT	3 cut(s)	12, 721, 2179
SspMI	CTAG	4 cut(s)	552, 1461, 1515, 1905
StuI	AGGCCT	1 cut(s)	2695
StyD4I	CCNGG	3 cut(s)	334, 1258, 1584
StyI	CCWWGG	3 cut(s)	678, 1605, 2031
TaiI	ACGT	4 cut(s)	262, 418, 1312, 1735
TaqI	TCGA	3 cut(s)	874, 983, 2625
TatI	WGTACW	3 cut(s)	1006, 1082, 2212
TauI	GCSGC	4 cut(s)	110, 597, 1785, 2111
TfiI	GAWTC	7 cut(s)	470, 605, 1268, 1535, 1772, 2312, 2717
Tru1I	TTAA	8 cut(s)	138, 155, 1347, 1593, 1989, 2007, 2301, 2331
Tru9I	TTAA	8 cut(s)	138, 155, 1347, 1593, 1989, 2007, 2301, 2331
TscAI	CASTG	7 cut(s)	27, 946, 1042, 1048, 1840, 2293, 2665
TseFI	GTSAC	5 cut(s)	725, 734, 941, 1376, 2723
TseI	GCWGC	8 cut(s)	197, 206, 289, 806, 921, 1404, 2207, 2248
Tsp45I	GTSAC	5 cut(s)	725, 734, 941, 1376, 2723
TspGWI	ACGGA	2 cut(s)	1220, 1535
TspRI	CASTG	7 cut(s)	27, 946, 1042, 1048, 1840, 2293, 2665
VpaK11BI	GGWCC	2 cut(s)	1339, 2459
VspI	ATTAAT	1 cut(s)	138
XapI	RAATTY	3 cut(s)	369, 659, 2488
XbaI	TCTAGA	1 cut(s)	1460
XceI	RCATGY	2 cut(s)	1016, 2668
XmnI	GAANNNNTTC	2 cut(s)	822, 2150
XspI	CTAG	4 cut(s)	552, 1461, 1515, 1905
ZrmI	AGTACT	1 cut(s)	1084
Zsp2I	ATGCAT	1 cut(s)	1718

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.