Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0008397

Physical Location & Seq

Genomic Coordinates Forward (+)

5210692 .. 5216232

Gene Structure 5541 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2322 bp

ATGGCGGAGGAGGAGGTTGTGGTAACCGCGGAGAGCCCTAGGCCGTCGGATCACAAGCGGAAGCTCGAGGATTTGGAGCCTAAAGCAGCACCGGAAATAGTTGAGCTCGACTCCGACGGTCCCGATGACGCGAATGCAGAGCTTGATTGCACCGAAGAAGTTGATGTATCGCCGTCCGATGAATCAGAAGCGAAGAGGCCTCGCCTTGATGACAAGCCCGAAGGAATAACTAGTGAGAATGGCCACCAAGAGGAGAAGGTAGATGAGCCCGAAAAGGAGAATGAGGATCAGCCAAGTGTAGATAGCAGTGACTTGGAGGTCCCCCAACCTGCATCTGTGGAAGTTACCGAAGCAGTGATCGACGAGCAAAAGTCTGAAGTTAATGAACCACAGAATGGCATGAATGGTGAGCCGAGTGACACCCAAAATCATGCTGAGAATTCAGTGGTGGAAAAAGCGGAGGAACCCCCTCAAGGGGAGTCTCAACCACACTATGTAGAGGAACCTCAGCAAGGTGATGCTTACTCTGCGCAACAAGAACAGCCTTCTGCGAGTGAGACTATGACACACAAAATGGAGGTTCCTAATAATAAGGTTGGGGTTTTAATTGGCAAGTCGGGGGATACTATACGGTACTTGCAATACAATTCTGGAGCAAAGATTCAAATCACAAGGGATTCCGATGCAGATCCATATTCTGCAAGCAGGCCAGTGGAGATAATAGGAACTTTGGATAATATAAGCAAAGCAGAGAAACTGATAAATGCCGTTATTGCCGAGGCTGATGCAGGGGGTTCTCCTTCTTTGGTTGCTAGAGGCGTTGCTACTGCACTGGCTGTTGCAGCAGCAGAACAAATTCAGATTCAAGTTCCGAATGAGAAGGTTGGTTTGATAATTGGCAGAGGTGGGGAGACCATTAAAGGTCTGCAGACCCGATCAGGAGCACGCATCCAGTTGATACCCCAACATCTTCCGGAGGGGGATGAATCTAAAGAAAGGACCGTCCGAGTTACTGGTGATAAGAAGCAGATTGAAGTTGCAAGAGAATTGATAAAGGAAGTTATGAATCAGACTGTGAGGCCATCACCTCTCTCCAGTGGTTTTAATCATCAGGGTTATCATCCCCATGGACCAGGTGGTTCTCAATGGGGTCCGCGAGGGCCTCATCTACCTCAGCCATCTTCGTATGATTATCCGCAACGAGGACCTTATCCATCCCATAATCCTCAGTACCCTCCTGCTTATGGGGGTTATCCTCAACATATGGGTCCAAGAAGTGGCTATGGTTCTGGTTGGGAGCAAAGGCCACCTTCTAGCATGCCACATGGTGGTGGTTATAATTACTATGGTGGACAAGTAGCTGATGCTCCATTATCTGCCCAACATTCTGCTCCCGTTCCTTCTCATGCTCCTGGCCCGTCTCCTAACCCTGCAATGGGTGCACCGTCCCAGGCAAATTACAATTATGGGCAGCCACATGGTCCAGATTATGGTCATCCGGCACCTTATTCCCAGGCTGCACCTCCTCAGCATAACTATGGGCATGGATACGAAGAACCAAAATATGATAATCATGCTCCAACACAGCACCCCTATGGAGGATATGCACCTTCGCAGCAATATCCACAAACTGGAGCTCATCCAGGTCCACAGCAACATTATGGCAAGCCCCCACCATACGGCATGCAATCACAAGCTCCTACTCCTCAGTCTTATGGCCCTCCCAGGGCTAATCAACCAGGAGATGCGGTTTATCAGGGTTCTGCACCACCTCAATCATACGGTCCGAATGTTCTAGCTCAACAGTCATATCCATATGCATCCAGTGGACCTGCTCAGCAGATGTATCCTGCGTATGGTTCTGCACCAGCTGCTGATGGGTACAGTCACCCACCACCCGCTTCTGGCTCGGGTTATCCACAACAAGGCGGGCAACCTGTTAGCTATGGCCAGCCTGGTGCACAGCAGGCAGCTGGCGGCTATGGACAGGCAGCTCCTACTGCAGGGTACGCACAATACCCATCTTCTCAACAAGGTTACGCCGAGCAGGCTGCTCCAAATGCAGCAGGTTACGGGTACCAGGGGTCTCAAGACCCTGGATATGGAGCCGCCCCTGCAGCATCATATGGTGCACCAGCAGCTGCGCAGCCAGGTTATGCTCAACCGGCAGCTCAACAAAATTATGATCAGTCAATCCCCCAGTCCGCCGGTTATGGAGCTGCACCAGCAGCTGCATCAGCTGGTTATGGGAAGACGGTGTCCCCTCAGCCTGGTTATCCCCAGTACGACTCGAGCCAAATGTATGCTGCTGCACCTCGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0000977 GO:0000978 GO:0000981 GO:0000982 GO:0000987 GO:0001012 GO:0001067 GO:0001077 GO:0001228 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1

Protein Analysis

774

Amino Acids

81.65

Weight (kDa)

4.81

Isoelectric Point (pI)

62.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_1	PF00013	189 - 255	1.3e-16	KH domain
KH_1	PF00013	286 - 353	1e-18	KH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008397)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G33680 AT4G10070
fragaria_vesca	FvH4_2g35080 FvH4_2g35080 FvH4_2g35080
malus_domestica	MD08G1108100.v1.1 MD15G1088600.v1.1 MD15G1088800.v1.1
prunus_persica	Prupe.1G442700_v2.0.a1
pyrus_communis	pycom08g09010 pycom15g08310
rosa_chinensis	RchiOBHm_Chr6g0306891
rosa_laevigata	RLG00000010757
rosa_multiflora	Rmu_co8448611.1_g000001 Rmu_co8474845.1_g000001 Rmu_sc0018770.1_g000003
rosa_roxburghii	Rroxscaffold_7G00161380
rosa_rugosa	Rorug06G0354100
rosa_samantha	Rh6AG465700 Rh6BG435100 Rh6CG480200 Rh6DG467100
rosa_wichuraiana	Rw6G040590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1338
AasI	GACNNNNNNGTC	1 cut(s)	317
Acc16I	TGCGCA	2 cut(s)	531, 2145
Acc36I	ACCTGC	3 cut(s)	337, 1840, 2057
Acc65I	GGTACC	1 cut(s)	2076
AccB1I	GGYRCC	2 cut(s)	1501, 2076
AccB7I	CCANNNNNTGG	5 cut(s)	395, 1277, 1328, 1490, 1631
AccII	CGCG	3 cut(s)	29, 131, 1156
AccIII	TCCGGA	1 cut(s)	973
AclWI	GGATC	3 cut(s)	57, 294, 683
AcoI	YGGCCR	2 cut(s)	241, 1948
AcsI	RAATTY	2 cut(s)	439, 855
AcuI	CTGAAG	1 cut(s)	396
AdeI	CACNNNGTG	1 cut(s)	1328
AfaI	GTAC	6 cut(s)	635, 1232, 1883, 2009, 2078, 2285
AgsI	TTSAA	3 cut(s)	665, 866, 1034
AhlI	ACTAGT	1 cut(s)	230
Alw21I	GWGCWC	6 cut(s)	108, 946, 1444, 1639, 1963, 2134
Alw26I	GTCTC	5 cut(s)	486, 551, 905, 1425, 2091
Alw44I	GTGCAC	3 cut(s)	1440, 1959, 2130
AlwI	GGATC	3 cut(s)	57, 294, 683
AlwNI	CAGNNNCTG	3 cut(s)	1874, 2141, 2231
Ama87I	CYCGRG	3 cut(s)	65, 1909, 2290
Aor13HI	TCCGGA	1 cut(s)	973
ApaLI	GTGCAC	3 cut(s)	1440, 1959, 2130
ApoI	RAATTY	2 cut(s)	439, 855
Asp700I	GAANNNNTTC	1 cut(s)	855
Asp718I	GGTACC	1 cut(s)	2076
AspA2I	CCTAGG	1 cut(s)	38
AspLEI	GCGC	2 cut(s)	532, 2146
AsuHPI	GGTGA	5 cut(s)	419, 527, 1028, 1077, 1880
AvaI	CYCGRG	3 cut(s)	65, 1909, 2290
AvrII	CCTAGG	1 cut(s)	38
BaeGI	GKGCMC	3 cut(s)	1444, 1963, 2134
BalI	TGGCCA	2 cut(s)	243, 1950
BanI	GGYRCC	2 cut(s)	1501, 2076
BanII	GRGCYC	4 cut(s)	38, 108, 270, 1639
BbsI	GAAGAC	1 cut(s)	2258
Bbv12I	GWGCWC	6 cut(s)	108, 946, 1444, 1639, 1963, 2134
BbvCI	CCTCAGC	4 cut(s)	507, 1173, 1527, 2265
BccI	CCATC	5 cut(s)	1090, 1186, 1222, 1871, 2029
BceAI	ACGGC	4 cut(s)	28, 157, 752, 1696
BcgI	CGANNNNNNTGC	4 cut(s)	767, 801, 2033, 2067
BciVI	GTATCC	3 cut(s)	616, 1541, 1857
BclI	TGATCA	1 cut(s)	2185
BcoDI	GTCTC	5 cut(s)	486, 551, 905, 1425, 2091
BcuI	ACTAGT	1 cut(s)	230
BfaI	CTAG	5 cut(s)	39, 231, 813, 1314, 1796
BfmI	CTRYAG	3 cut(s)	926, 2001, 2115
BfuAI	ACCTGC	3 cut(s)	337, 1840, 2057
BfuI	GTATCC	3 cut(s)	616, 1541, 1857
BglI	GCCNNNNNGGC	1 cut(s)	2048
BlnI	CCTAGG	1 cut(s)	38
BlpI	GCTNAGC	1 cut(s)	1836
BmeT110I	CYCGRG	3 cut(s)	65, 1909, 2290
BmrI	ACTGGG	2 cut(s)	2194, 2275
BmuI	ACTGGG	2 cut(s)	2194, 2275
BpiI	GAAGAC	1 cut(s)	2258
BplI	GAGNNNNNCTC	2 cut(s)	95, 127
BpmI	CTGGAG	3 cut(s)	672, 1078, 1653
Bpu10I	CCTNAGC	4 cut(s)	507, 1173, 1527, 2265
Bpu1102I	GCTNAGC	1 cut(s)	1836
BpuEI	CTTGAG	2 cut(s)	456, 2073
BsaBI	GATNNNNATC	2 cut(s)	665, 687
BsaI	GGTCTC	2 cut(s)	905, 2091
BsaWI	WCCGGW	2 cut(s)	91, 973
BsaXI	ACNNNNNCTCC	2 cut(s)	1734, 1764
Bse118I	RCCGGY	2 cut(s)	2164, 2207
Bse1I	ACTGG	9 cut(s)	710, 837, 952, 1018, 1095, 1636, 1824, 2200, 2281
Bse3DI	GCAATG	1 cut(s)	1440
Bse8I	GATNNNNATC	2 cut(s)	665, 687
BseAI	TCCGGA	1 cut(s)	973
BseGI	GGATG	7 cut(s)	948, 988, 1120, 1214, 1495, 1639, 1820
BseJI	GATNNNNATC	2 cut(s)	665, 687
BseMI	GCAATG	1 cut(s)	1440
BseMII	CTCAG	8 cut(s)	426, 521, 1187, 1241, 1541, 1721, 1850, 2279
BseNI	ACTGG	9 cut(s)	710, 837, 952, 1018, 1095, 1636, 1824, 2200, 2281
BseRI	GAGGAG	5 cut(s)	23, 26, 266, 1515, 1695
BseSI	GKGCMC	3 cut(s)	1444, 1963, 2134
BsgI	GTGCAG	6 cut(s)	813, 1503, 1749, 1848, 2205, 2295
Bsh1236I	CGCG	3 cut(s)	29, 131, 1156
BshNI	GGYRCC	2 cut(s)	1501, 2076
BsiHKAI	GWGCWC	6 cut(s)	108, 946, 1444, 1639, 1963, 2134
BsiHKCI	CYCGRG	3 cut(s)	65, 1909, 2290
BsiSI	CCGG	5 cut(s)	92, 974, 1499, 2165, 2208
BslFI	GGGAC	4 cut(s)	105, 305, 1432, 2245
BsmAI	GTCTC	5 cut(s)	486, 551, 905, 1425, 2091
BsmBI	CGTCTC	1 cut(s)	1425
BsmFI	GGGAC	4 cut(s)	105, 305, 1432, 2245
BsmI	GAATGC	1 cut(s)	139
Bso31I	GGTCTC	2 cut(s)	905, 2091
BsoBI	CYCGRG	3 cut(s)	65, 1909, 2290
Bsp1286I	GDGCHC	8 cut(s)	38, 108, 270, 946, 1444, 1639, 1963, 2134
Bsp13I	TCCGGA	1 cut(s)	973
Bsp143I	GATC	6 cut(s)	49, 286, 357, 688, 935, 2185
Bsp1720I	GCTNAGC	1 cut(s)	1836
Bsp19I	CCATGG	1 cut(s)	1126
BspCNI	CTCAG	8 cut(s)	427, 520, 1186, 1240, 1540, 1720, 1849, 2278
BspEI	TCCGGA	1 cut(s)	973
BspFNI	CGCG	3 cut(s)	29, 131, 1156
BspMAI	CTGCAG	3 cut(s)	930, 2005, 2119
BspMI	ACCTGC	3 cut(s)	337, 1840, 2057
BspPI	GGATC	3 cut(s)	57, 294, 683
BspT107I	GGYRCC	2 cut(s)	1501, 2076
BspTNI	GGTCTC	2 cut(s)	905, 2091
BsrDI	GCAATG	1 cut(s)	1440
BsrFI	RCCGGY	2 cut(s)	2164, 2207
BsrI	ACTGG	9 cut(s)	710, 837, 952, 1018, 1095, 1636, 1824, 2200, 2281
BssAI	RCCGGY	2 cut(s)	2164, 2207
BssMI	GATC	6 cut(s)	49, 286, 357, 688, 935, 2185
BssT1I	CCWWGG	2 cut(s)	38, 1126
Bst4CI	ACNGT	9 cut(s)	119, 633, 1003, 1075, 1446, 1784, 1806, 1886, 2257
Bst6I	CTCTTC	1 cut(s)	188
BstAPI	GCANNNNNTGC	2 cut(s)	1439, 1871
BstDEI	CTNAG	8 cut(s)	435, 507, 1173, 1227, 1527, 1707, 1836, 2265
BstDSI	CCRYGG	2 cut(s)	27, 1126
BstEII	GGTNACC	1 cut(s)	22
BstENI	CCTNNNNNAGG	2 cut(s)	510, 2001
BstF5I	GGATG	7 cut(s)	948, 988, 1120, 1214, 1495, 1639, 1820
BstFNI	CGCG	3 cut(s)	29, 131, 1156
BstHHI	GCGC	2 cut(s)	532, 2146
BstKTI	GATC	6 cut(s)	52, 289, 360, 691, 938, 2188
BstMAI	GTCTC	5 cut(s)	486, 551, 905, 1425, 2091
BstMBI	GATC	6 cut(s)	49, 286, 357, 688, 935, 2185
BstNSI	RCATGY	2 cut(s)	1321, 1687
BstPI	GGTNACC	1 cut(s)	22
BstSFI	CTRYAG	3 cut(s)	926, 2001, 2115
BstSLI	GKGCMC	3 cut(s)	1444, 1963, 2134
BstUI	CGCG	3 cut(s)	29, 131, 1156
BstV2I	GAAGAC	1 cut(s)	2258
BstX2I	RGATCY	1 cut(s)	688
BstYI	RGATCY	1 cut(s)	688
BsuI	GTATCC	3 cut(s)	616, 1541, 1857
BtgI	CCRYGG	2 cut(s)	27, 1126
BtsCI	GGATG	7 cut(s)	948, 988, 1120, 1214, 1495, 1639, 1820
BtsI	GCAGTG	2 cut(s)	313, 360
BtsIMutI	CAGTG	7 cut(s)	313, 360, 450, 717, 830, 1102, 1831
BveI	ACCTGC	3 cut(s)	337, 1840, 2057
CaiI	CAGNNNCTG	3 cut(s)	1874, 2141, 2231
CfoI	GCGC	2 cut(s)	532, 2146
Cfr10I	RCCGGY	2 cut(s)	2164, 2207
Cfr42I	CCGCGG	1 cut(s)	30
CpoI	CGGWCCG	1 cut(s)	1784
CseI	GACGC	1 cut(s)	137
CsiI	ACCWGGT	1 cut(s)	1132
Csp6I	GTAC	6 cut(s)	634, 1231, 1882, 2008, 2077, 2284
CspI	CGGWCCG	1 cut(s)	1784
CviQI	GTAC	6 cut(s)	634, 1231, 1882, 2008, 2077, 2284
DdeI	CTNAG	8 cut(s)	435, 507, 1173, 1227, 1527, 1707, 1836, 2265
DpnI	GATC	6 cut(s)	51, 288, 359, 690, 937, 2187
DpnII	GATC	6 cut(s)	49, 286, 357, 688, 935, 2185
DraIII	CACNNNGTG	1 cut(s)	1328
DrdI	GACNNNNNNGTC	1 cut(s)	317
DseDI	GACNNNNNNGTC	1 cut(s)	317
EaeI	YGGCCR	2 cut(s)	241, 1948
Eam1104I	CTCTTC	1 cut(s)	188
EarI	CTCTTC	1 cut(s)	188
EciI	GGCGGA	2 cut(s)	20, 2194
Ecl136II	GAGCTC	2 cut(s)	106, 1637
Eco130I	CCWWGG	2 cut(s)	38, 1126
Eco147I	AGGCCT	1 cut(s)	199
Eco24I	GRGCYC	4 cut(s)	38, 108, 270, 1639
Eco31I	GGTCTC	2 cut(s)	905, 2091
Eco53kI	GAGCTC	2 cut(s)	106, 1637
Eco57I	CTGAAG	1 cut(s)	396
Eco88I	CYCGRG	3 cut(s)	65, 1909, 2290
Eco91I	GGTNACC	1 cut(s)	22
EcoICRI	GAGCTC	2 cut(s)	106, 1637
EcoNI	CCTNNNNNAGG	2 cut(s)	510, 2001
EcoO109I	RGGNCCY	3 cut(s)	319, 1160, 1205
EcoO65I	GGTNACC	1 cut(s)	22
EcoRI	GAATTC	1 cut(s)	439
EcoT14I	CCWWGG	2 cut(s)	38, 1126
EcoT22I	ATGCAT	1 cut(s)	1822
EcoT38I	GRGCYC	4 cut(s)	38, 108, 270, 1639
ErhI	CCWWGG	2 cut(s)	38, 1126
Esp3I	CGTCTC	1 cut(s)	1425
FalI	AAGNNNNNCTT	2 cut(s)	1294, 1326
FaqI	GGGAC	4 cut(s)	105, 305, 1432, 2245
FauI	CCCGC	2 cut(s)	1906, 1922
FauNDI	CATATG	3 cut(s)	1263, 1816, 2125
FbaI	TGATCA	1 cut(s)	2185
FokI	GGATG	7 cut(s)	935, 995, 1107, 1201, 1482, 1626, 1807
FriOI	GRGCYC	4 cut(s)	38, 108, 270, 1639
FspBI	CTAG	5 cut(s)	39, 231, 813, 1314, 1796
FspI	TGCGCA	2 cut(s)	531, 2145
GlaI	GCGC	2 cut(s)	531, 2145
GsuI	CTGGAG	3 cut(s)	672, 1078, 1653
HapII	CCGG	5 cut(s)	92, 974, 1499, 2165, 2208
HgaI	GACGC	1 cut(s)	137
HhaI	GCGC	2 cut(s)	532, 2146
Hin6I	GCGC	2 cut(s)	530, 2144
HinP1I	GCGC	2 cut(s)	530, 2144
HinfI	GANTC	9 cut(s)	110, 182, 479, 661, 677, 862, 986, 1066, 2288
HpaII	CCGG	5 cut(s)	92, 974, 1499, 2165, 2208
HphI	GGTGA	5 cut(s)	419, 527, 1028, 1077, 1880
Hpy166II	GTNNAC	6 cut(s)	1352, 1442, 1649, 1829, 1961, 2132
Hpy188III	TCNNGA	6 cut(s)	122, 651, 939, 974, 1484, 2090
Hpy8I	GTNNAC	6 cut(s)	1352, 1442, 1649, 1829, 1961, 2132
Hpy99I	CGWCG	3 cut(s)	49, 119, 365
HpyAV	CCTTC	8 cut(s)	215, 250, 555, 810, 874, 1320, 1410, 1620
HpyCH4III	ACNGT	9 cut(s)	119, 633, 1003, 1075, 1446, 1784, 1806, 1886, 2257
HpyF3I	CTNAG	8 cut(s)	435, 507, 1173, 1227, 1527, 1707, 1836, 2265
HspAI	GCGC	2 cut(s)	530, 2144
Kpn2I	TCCGGA	1 cut(s)	973
KpnI	GGTACC	1 cut(s)	2080
Ksp22I	TGATCA	1 cut(s)	2185
KspI	CCGCGG	1 cut(s)	30
Kzo9I	GATC	6 cut(s)	49, 286, 357, 688, 935, 2185
MabI	ACCWGGT	1 cut(s)	1132
MaeI	CTAG	5 cut(s)	39, 231, 813, 1314, 1796
MaeIII	GTNAC	8 cut(s)	22, 308, 343, 416, 1009, 1886, 2036, 2069
MalI	GATC	6 cut(s)	51, 288, 359, 690, 937, 2187
MboI	GATC	6 cut(s)	49, 286, 357, 688, 935, 2185
MboII	GAAGA	7 cut(s)	167, 205, 962, 1173, 1565, 2016, 2263
MflI	RGATCY	1 cut(s)	688
MhlI	GDGCHC	8 cut(s)	38, 108, 270, 946, 1444, 1639, 1963, 2134
MlsI	TGGCCA	2 cut(s)	243, 1950
MluNI	TGGCCA	2 cut(s)	243, 1950
MlyI	GAGTC	3 cut(s)	104, 488, 2282
MmeI	TCCRAC	3 cut(s)	27, 138, 1604
Mox20I	TGGCCA	2 cut(s)	243, 1950
Mph1103I	ATGCAT	1 cut(s)	1822
MroI	TCCGGA	1 cut(s)	973
MroXI	GAANNNNTTC	1 cut(s)	855
MscI	TGGCCA	2 cut(s)	243, 1950
MseI	TTAA	4 cut(s)	381, 605, 918, 1104
MslI	CAYNNNNRTG	4 cut(s)	1125, 1329, 1536, 1593
Msp20I	TGGCCA	2 cut(s)	243, 1950
MspA1I	CMGCKG	6 cut(s)	29, 1871, 1973, 2141, 2231, 2240
MspI	CCGG	5 cut(s)	92, 974, 1499, 2165, 2208
Mva1269I	GAATGC	1 cut(s)	139
MvnI	CGCG	3 cut(s)	29, 131, 1156
NcoI	CCATGG	1 cut(s)	1126
NdeI	CATATG	3 cut(s)	1263, 1816, 2125
NdeII	GATC	6 cut(s)	49, 286, 357, 688, 935, 2185
NmeAIII	GCCGAG	3 cut(s)	438, 802, 2068
NmuCI	GTSAC	3 cut(s)	308, 416, 1886
NsbI	TGCGCA	2 cut(s)	531, 2145
NsiI	ATGCAT	1 cut(s)	1822
NspI	RCATGY	2 cut(s)	1321, 1687
PaeI	GCATGC	2 cut(s)	1321, 1687
PaeR7I	CTCGAG	2 cut(s)	65, 2290
PasI	CCCWGGG	1 cut(s)	1725
PceI	AGGCCT	1 cut(s)	199
PctI	GAATGC	1 cut(s)	139
PdmI	GAANNNNTTC	1 cut(s)	855
PfeI	GAWTC	6 cut(s)	182, 661, 677, 862, 986, 1066
PflFI	GACNNNGTC	1 cut(s)	2257
PflMI	CCANNNNNTGG	5 cut(s)	395, 1277, 1328, 1490, 1631
PleI	GAGTC	3 cut(s)	104, 487, 2282
PpsI	GAGTC	3 cut(s)	104, 487, 2282
PpuMI	RGGWCCY	2 cut(s)	319, 1205
PsiI	TTATAA	1 cut(s)	1338
Psp124BI	GAGCTC	2 cut(s)	108, 1639
Psp5II	RGGWCCY	2 cut(s)	319, 1205
PspEI	GGTNACC	1 cut(s)	22
PspPPI	RGGWCCY	2 cut(s)	319, 1205
PspXI	VCTCGAGB	2 cut(s)	65, 2290
PstI	CTGCAG	3 cut(s)	930, 2005, 2119
PstNI	CAGNNNCTG	3 cut(s)	1874, 2141, 2231
PsuI	RGATCY	1 cut(s)	688
PsyI	GACNNNGTC	1 cut(s)	2257
PvuII	CAGCTG	5 cut(s)	1871, 1973, 2141, 2231, 2240
RsaI	GTAC	6 cut(s)	635, 1232, 1883, 2009, 2078, 2285
RsaNI	GTAC	6 cut(s)	634, 1231, 1882, 2008, 2077, 2284
RseI	CAYNNNNRTG	4 cut(s)	1125, 1329, 1536, 1593
Rsr2I	CGGWCCG	1 cut(s)	1784
RsrII	CGGWCCG	1 cut(s)	1784
SacI	GAGCTC	2 cut(s)	108, 1639
SacII	CCGCGG	1 cut(s)	30
SaqAI	TTAA	4 cut(s)	381, 605, 918, 1104
Sau3AI	GATC	6 cut(s)	49, 286, 357, 688, 935, 2185
SchI	GAGTC	3 cut(s)	104, 488, 2282
SduI	GDGCHC	8 cut(s)	38, 108, 270, 946, 1444, 1639, 1963, 2134
SexAI	ACCWGGT	1 cut(s)	1132
SfcI	CTRYAG	3 cut(s)	926, 2001, 2115
Sfr274I	CTCGAG	2 cut(s)	65, 2290
Sfr303I	CCGCGG	1 cut(s)	30
SgrBI	CCGCGG	1 cut(s)	30
SlaI	CTCGAG	2 cut(s)	65, 2290
SmiMI	CAYNNNNRTG	4 cut(s)	1125, 1329, 1536, 1593
SmlI	CTYRAG	4 cut(s)	65, 471, 2088, 2290
SmoI	CTYRAG	4 cut(s)	65, 471, 2088, 2290
SpeI	ACTAGT	1 cut(s)	230
SphI	GCATGC	2 cut(s)	1321, 1687
SseBI	AGGCCT	1 cut(s)	199
SspMI	CTAG	5 cut(s)	39, 231, 813, 1314, 1796
SstI	GAGCTC	2 cut(s)	108, 1639
StuI	AGGCCT	1 cut(s)	199
StyI	CCWWGG	2 cut(s)	38, 1126
TaaI	ACNGT	9 cut(s)	119, 633, 1003, 1075, 1446, 1784, 1806, 1886, 2257
TaqI	TCGA	4 cut(s)	66, 108, 360, 2291
TauI	GCSGC	2 cut(s)	1980, 2111
TfiI	GAWTC	6 cut(s)	182, 661, 677, 862, 986, 1066
Tru1I	TTAA	4 cut(s)	381, 605, 918, 1104
Tru9I	TTAA	4 cut(s)	381, 605, 918, 1104
TscAI	CASTG	7 cut(s)	313, 360, 450, 717, 837, 1102, 1831
TseFI	GTSAC	3 cut(s)	308, 416, 1886
Tsp45I	GTSAC	3 cut(s)	308, 416, 1886
TspDTI	ATGAA	5 cut(s)	195, 399, 416, 999, 1079
TspRI	CASTG	7 cut(s)	313, 360, 450, 717, 837, 1102, 1831
Tth111I	GACNNNGTC	1 cut(s)	2257
Van91I	CCANNNNNTGG	5 cut(s)	395, 1277, 1328, 1490, 1631
VneI	GTGCAC	3 cut(s)	1440, 1959, 2130
XagI	CCTNNNNNAGG	2 cut(s)	510, 2001
XapI	RAATTY	2 cut(s)	439, 855
XceI	RCATGY	2 cut(s)	1321, 1687
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1133
XhoI	CTCGAG	2 cut(s)	65, 2290
XmaJI	CCTAGG	1 cut(s)	38
XmnI	GAANNNNTTC	1 cut(s)	855
XspI	CTAG	5 cut(s)	39, 231, 813, 1314, 1796
Zsp2I	ATGCAT	1 cut(s)	1822

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.