Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0007349

Physical Location & Seq

Genomic Coordinates Reverse (-)

5704640 .. 5710817

Gene Structure 6178 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2079 bp

ATGGTGAATTATATGGTGGAACGCGCCACGAGCGACATGCTTATCGGTCCTGATTGGGCCATGAACCTCGAAATCTGTGACATATGCAACCACGACCCGGTGCAAGCGAAGGATGTTGTTAAAGGTATAAAGAAGCGCCTTGGAAGTAAGAATTCAAAAGTTCAACTTCTTGCCTTAACACTGTTGGAAACAATAATAAAGAATTGTGGAGACATTGTTCATATGCATGTAGCAGAGAAAGACCTCCTCCATGATATGCCGGACTATCATGTCAAAGAGAAGATATTGATCGTCATAGATACCTGGCAAGAAGCTTTTGGGGGACCGAGAGCAAGATATCCACAATACTATGCTGCATACCAGGATTTGTTGCGTTCTGGAGCAGTATTCCCTCAAAGATCTGAATCATCTGCGCCTGTATTCACACCACCCCAGACACAACCATTGTCAGCATTTCCTCAGAATTTGCAAAATCCAGATCGTCCGAGAGATGTAGCTGAGCCTTCTGCAGAGGCTGAGTTCCCAACCTTGAGCTTGACAGAAATTCAGAATGCACGGGGTATCATGGATGTCCTGGCAGAAATGCTAACTGCAATAGATAACAAAGAGGGGCTTAGACAGGAGGTGATTGTTGATTTGGTTGACCAGTGCCGTACATATAAGCAGAGAGTGGTACACCTTGTTAACTCGACTGCGGATGAATCACTTCTGTGTCAAGGGCTGGCGATGAATGATGACTTGCAACGTCTTCTAGCCAAACATGAAGCCATTGCTTCTGGAAATCCAGTTCAGCCGGATAAACCCAAGCCTGCAGCTAACGGAGCACTTGTAAATGTTGGTGGTCCTCTAGTTGACACTGGAAATGACAGCAAACAGCCTGATGGGAGATCCACCTCAAGTTCTGGTTCCGGTGCTAATCCACTTAATCAGTTATTGCTTACTGCCCCTCCAACTACAAATGGTTCAACTTCTACTGCAAAGGCCGATCCCAGGATGGATCTTCTTAGCGGTGATGACTTTGTCTCACCAAAGGCAGATGCTTCACTGGCTCTTGTTCCTGTGGGACAACAGCCAACTACTCCTGTTAATCAGCAGAATGCCCTTGCTCTTATCGACATGTTTGGCACTGAGAATGTCCCGAACCCTGTGAATACCCATCCTATTAATGCAGCCAGCCAACCCAATCCTTCACCCTCGCAATTCCCACAGCAGCAGAATTTTCAATCTCCACAAGCAGGATTTCTCCCGAACGGAAATGCCCCAATTATGGGGGTCCCACAGTATGAGCAGTCTCCATTCGGACAAGGTGCTGCTCCTGCCTGGAATGGTCAGATGGTGCAGTCACAACCACTGCAGCAGCAGCCGGCTTCACCGGGTTATGGTTCACCAACCAGTGGATCATTGCCACCACCTCCCTGGGAAGCTCAGTCAATAGATGATGGCAGCCCAGTAGCAGGTTCTCGATTCTCTCCACCCCCACTGCAAGTTACTACCAAGGTGGTGGTCAATTCACCAGGTGGTTTCCATCCCCAGGGACCTCAAAGCGACCAGGTTGTAGGTATGTATATCCAGCCAATTACAACTACCCATTTGTCAGCAATCAATAACCAGGTTGGTCCTAGCAATCATTTGGGTTTGCCCTCTTCACCGGTCCAAGGGCCATACACGGGTATGACTCCACAAGCTATTCAAGCAGGCCAGATGACATCTATGTATCCTCAACAAATGTATGGTGGTAATCAACTAGTCCCCTACGGCTACGATCAACAGCATCAAGCATACGCCCTTCAGCAACAGCAACAGCAATATCAACAACAGCAAGCCTACGCCCTTCAGCAACAGCAGCACGCATACGCCCTTCAGCAACAGCAACAACAGCAGTATGCCCTTCAGCAGCAAATGTACGGTCTTTCCGTTAGAGATGGTAATGGTATGAAAAACCCCTACCAGGTTTCCGCTCCATCTTATGTTCCACCAAGCAAGCCATCCAGGCCGGAGGATAAGCTATTCGGAGACCTCGTTGACTTTGCAAAACTGAAGCCAACAAAAACGACGCCTGGTGCAGCTGGTAGCGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006464 GO:0006605 GO:0006625 GO:0006629 GO:0006631 GO:0006635 GO:0006807 GO:0006810 GO:0006886 GO:0006996 GO:0007031 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009062 GO:0009987 GO:0015031 GO:0015833 GO:0015919 GO:0016042 GO:0016043 GO:0016054 GO:0016558 GO:0016567 GO:0016740 GO:0017038 GO:0019395 GO:0019538 GO:0019752 GO:0019787 GO:0019899 GO:0030258 GO:0031625 GO:0032446 GO:0032787 GO:0033036 GO:0033365 GO:0034440 GO:0034613 GO:0036211 GO:0042886 GO:0043170 GO:0043412 GO:0043436 GO:0043574 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044282 GO:0044389 GO:0044424 GO:0044464 GO:0044743 GO:0045184 GO:0046395 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0055114 GO:0061630 GO:0061659 GO:0065002 GO:0070647 GO:0070727 GO:0071702 GO:0071704 GO:0071705 GO:0071806 GO:0071840 GO:0072329 GO:0072594 GO:0072662 GO:0072663 GO:0140096 GO:1901564 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GAT VHS

Protein Analysis

693

Amino Acids

74.77

Weight (kDa)

5.32

Isoelectric Point (pI)

54.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
VHS	PF00790	2 - 121	3.4e-26	VHS domain
GAT	PF03127	189 - 260	2.3e-16	GAT domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007349)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32760 AT4G32760 AT4G32760
fragaria_vesca	FvH4_2g35970 FvH4_2g35970 FvH4_2g35970 FvH4_2g35970 FvH4_2g35970
malus_domestica	MD08G1116900.v1.1 MD15G1096400.v1.1
prunus_persica	Prupe.1G451300_v2.0.a1 Prupe.1G451300_v2.0.a1
pyrus_communis	pycom08g09740 pycom15g08850
rosa_chinensis	RchiOBHm_Chr6g0305901
rosa_laevigata	RLG00000010848
rosa_multiflora	Rmu_sc0001809.1_g000047
rosa_roxburghii	Rroxscaffold_7G00162230
rosa_rugosa	Rorug06G0344900 Rorug06G0345000
rosa_samantha	Rh6AG456700 Rh6BG444600 Rh6CG470600 Rh6DG457300
rosa_wichuraiana	Rw6G039840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	269
Acc36I	ACCTGC	1 cut(s)	1445
AccB7I	CCANNNNNTGG	1 cut(s)	1394
AccBSI	CCGCTC	1 cut(s)	1958
AccII	CGCG	1 cut(s)	24
AciI	CCGC	3 cut(s)	695, 1008, 1956
AclWI	GGATC	4 cut(s)	882, 980, 1005, 1405
AcsI	RAATTY	4 cut(s)	151, 463, 543, 1216
AcuI	CTGAAG	5 cut(s)	1772, 1817, 1844, 1874, 2057
AcyI	GRCGYC	1 cut(s)	2054
AdeI	CACNNNGTG	1 cut(s)	1517
AfaI	GTAC	3 cut(s)	655, 675, 1904
AflIII	ACRYGT	1 cut(s)	1116
AgeI	ACCGGT	1 cut(s)	1648
AgsI	TTSAA	5 cut(s)	156, 164, 966, 1223, 1691
AhlI	ACTAGT	1 cut(s)	1744
AleI	CACNNNNGTG	1 cut(s)	709
AloI	GAACNNNNNNTCC	4 cut(s)	201, 233, 771, 803
AluBI	AGCT	8 cut(s)	314, 497, 534, 815, 1424, 1685, 2005, 2066
AluI	AGCT	8 cut(s)	314, 497, 534, 815, 1424, 1685, 2005, 2066
Alw21I	GWGCWC	1 cut(s)	826
Alw26I	GTCTC	4 cut(s)	204, 1027, 1296, 2007
AlwI	GGATC	4 cut(s)	882, 980, 1005, 1405
AlwNI	CAGNNNCTG	1 cut(s)	515
AoxI	GGCC	5 cut(s)	57, 981, 1658, 1696, 1991
ApoI	RAATTY	4 cut(s)	151, 463, 543, 1216
ArsI	GACNNNNNNTTYG	2 cut(s)	1891, 1923
AseI	ATTAAT	1 cut(s)	1164
AsiGI	ACCGGT	1 cut(s)	1648
Asp700I	GAANNNNTTC	1 cut(s)	705
AspLEI	GCGC	3 cut(s)	26, 138, 415
AspS9I	GGNCC	9 cut(s)	47, 57, 323, 842, 1273, 1535, 1616, 1651, 1658
AsuC2I	CCSGG	2 cut(s)	98, 1374
AsuHPI	GGTGA	9 cut(s)	16, 637, 1017, 1022, 1182, 1362, 1377, 1503, 1638
AvaII	GGWCC	7 cut(s)	47, 323, 842, 1273, 1535, 1616, 1651
BauI	CACGAG	1 cut(s)	28
BbsI	GAAGAC	1 cut(s)	740
Bbv12I	GWGCWC	1 cut(s)	826
BccI	CCATC	9 cut(s)	875, 988, 1164, 1327, 1433, 1533, 1916, 1969, 1993
BceAI	ACGGC	2 cut(s)	636, 1771
BcgI	CGANNNNNNTGC	2 cut(s)	19, 53
BciVI	GTATCC	1 cut(s)	1725
BcnI	CCSGG	2 cut(s)	98, 1374
BcoDI	GTCTC	4 cut(s)	204, 1027, 1296, 2007
BcuI	ACTAGT	1 cut(s)	1744
BfaI	CTAG	4 cut(s)	752, 848, 1620, 1745
BfmI	CTRYAG	3 cut(s)	507, 810, 1352
BfoI	RGCGCY	1 cut(s)	139
BfuAI	ACCTGC	1 cut(s)	1445
BfuI	GTATCC	1 cut(s)	1725
BglI	GCCNNNNNGGC	1 cut(s)	1990
BglII	AGATCT	1 cut(s)	398
BlpI	GCTNAGC	1 cut(s)	498
Bme18I	GGWCC	7 cut(s)	47, 323, 842, 1273, 1535, 1616, 1651
BmgT120I	GGNCC	9 cut(s)	47, 57, 323, 842, 1273, 1535, 1616, 1651, 1658
BmiI	GGNNCC	5 cut(s)	324, 907, 1274, 1275, 1536
BmrI	ACTGGG	1 cut(s)	1442
BmsI	GCATC	2 cut(s)	1027, 1780
BmuI	ACTGGG	1 cut(s)	1442
BpiI	GAAGAC	1 cut(s)	740
BpmI	CTGGAG	1 cut(s)	399
Bpu1102I	GCTNAGC	1 cut(s)	498
BpuEI	CTTGAG	2 cut(s)	550, 880
BpuMI	CCSGG	2 cut(s)	98, 1374
BsaBI	GATNNNNATC	2 cut(s)	287, 403
BsaHI	GRCGYC	1 cut(s)	2054
BsaI	GGTCTC	1 cut(s)	2007
BsaJI	CCNNGG	8 cut(s)	139, 989, 1415, 1416, 1494, 1530, 1531, 1654
BsaWI	WCCGGW	2 cut(s)	908, 1648
BsaXI	ACNNNNNCTCC	8 cut(s)	201, 231, 813, 843, 931, 961, 2004, 2034
Bse118I	RCCGGY	2 cut(s)	1363, 1648
Bse1I	ACTGG	6 cut(s)	646, 785, 862, 1050, 1392, 1448
Bse3DI	GCAATG	2 cut(s)	768, 1400
Bse8I	GATNNNNATC	2 cut(s)	287, 403
BseDI	CCNNGG	8 cut(s)	139, 989, 1415, 1416, 1494, 1530, 1531, 1654
BseGI	GGATG	7 cut(s)	118, 574, 703, 999, 1156, 1525, 1985
BseJI	GATNNNNATC	2 cut(s)	287, 403
BseMI	GCAATG	2 cut(s)	768, 1400
BseMII	CTCAG	5 cut(s)	473, 489, 507, 1119, 1439
BseNI	ACTGG	6 cut(s)	646, 785, 862, 1050, 1392, 1448
BseRI	GAGGAG	1 cut(s)	236
BsgI	GTGCAG	1 cut(s)	1358
Bsh1236I	CGCG	1 cut(s)	24
BshFI	GGCC	5 cut(s)	59, 983, 1660, 1698, 1993
BshTI	ACCGGT	1 cut(s)	1648
BsiHKAI	GWGCWC	1 cut(s)	826
BsiSI	CCGG	8 cut(s)	98, 260, 794, 909, 1364, 1373, 1649, 1994
BslFI	GGGAC	6 cut(s)	336, 1077, 1121, 1259, 1548, 1733
BsmAI	GTCTC	4 cut(s)	204, 1027, 1296, 2007
BsmFI	GGGAC	6 cut(s)	336, 1077, 1121, 1259, 1548, 1733
BsmI	GAATGC	2 cut(s)	556, 1102
BsnI	GGCC	5 cut(s)	59, 983, 1660, 1698, 1993
Bso31I	GGTCTC	1 cut(s)	2007
Bsp1286I	GDGCHC	1 cut(s)	826
Bsp143I	GATC	8 cut(s)	288, 398, 478, 887, 985, 997, 1397, 1762
Bsp1720I	GCTNAGC	1 cut(s)	498
BspACI	CCGC	3 cut(s)	695, 1008, 1956
BspANI	GGCC	5 cut(s)	59, 983, 1660, 1698, 1993
BspCNI	CTCAG	5 cut(s)	472, 490, 508, 1120, 1438
BspFNI	CGCG	1 cut(s)	24
BspLI	GGNNCC	5 cut(s)	324, 907, 1274, 1275, 1536
BspMAI	CTGCAG	3 cut(s)	511, 814, 1356
BspMI	ACCTGC	1 cut(s)	1445
BspPI	GGATC	4 cut(s)	882, 980, 1005, 1405
BspTNI	GGTCTC	1 cut(s)	2007
BsrBI	CCGCTC	1 cut(s)	1958
BsrDI	GCAATG	2 cut(s)	768, 1400
BsrFI	RCCGGY	2 cut(s)	1363, 1648
BsrI	ACTGG	6 cut(s)	646, 785, 862, 1050, 1392, 1448
BssAI	RCCGGY	2 cut(s)	1363, 1648
BssECI	CCNNGG	8 cut(s)	139, 989, 1415, 1416, 1494, 1530, 1531, 1654
BssMI	GATC	8 cut(s)	288, 398, 478, 887, 985, 997, 1397, 1762
BssNI	GRCGYC	1 cut(s)	2054
BssSI	CACGAG	1 cut(s)	28
BssT1I	CCWWGG	3 cut(s)	139, 1494, 1654
Bst2BI	CACGAG	1 cut(s)	28
Bst4CI	ACNGT	3 cut(s)	183, 1281, 1907
Bst6I	CTCTTC	1 cut(s)	1648
BstACI	GRCGYC	1 cut(s)	2054
BstC8I	GCNNGC	9 cut(s)	105, 723, 810, 1174, 1365, 1696, 1821, 1848, 1982
BstDEI	CTNAG	7 cut(s)	459, 498, 516, 614, 1004, 1128, 1425
BstF5I	GGATG	7 cut(s)	118, 574, 703, 999, 1156, 1525, 1985
BstFNI	CGCG	1 cut(s)	24
BstH2I	RGCGCY	1 cut(s)	139
BstHHI	GCGC	3 cut(s)	26, 138, 415
BstKTI	GATC	8 cut(s)	291, 401, 481, 890, 988, 1000, 1400, 1765
BstMAI	GTCTC	4 cut(s)	204, 1027, 1296, 2007
BstMBI	GATC	8 cut(s)	288, 398, 478, 887, 985, 997, 1397, 1762
BstMWI	GCNNNNNNNGC	9 cut(s)	30, 821, 1046, 1316, 1360, 1691, 1843, 1876, 1990
BstNSI	RCATGY	3 cut(s)	40, 230, 1120
BstSFI	CTRYAG	3 cut(s)	507, 810, 1352
BstUI	CGCG	1 cut(s)	24
BstV2I	GAAGAC	1 cut(s)	740
BstX2I	RGATCY	3 cut(s)	398, 887, 997
BstXI	CCANNNNNNTGG	2 cut(s)	1416, 1501
BstYI	RGATCY	3 cut(s)	398, 887, 997
BsuI	GTATCC	1 cut(s)	1725
BsuRI	GGCC	5 cut(s)	59, 983, 1660, 1698, 1993
BtgZI	GCGATG	1 cut(s)	740
BtsCI	GGATG	7 cut(s)	118, 574, 703, 999, 1156, 1525, 1985
BtsI	GCAGTG	2 cut(s)	1349, 1478
BtsIMutI	CAGTG	8 cut(s)	179, 653, 855, 1043, 1125, 1349, 1399, 1478
BveI	ACCTGC	1 cut(s)	1445
Cac8I	GCNNGC	9 cut(s)	105, 723, 810, 1174, 1365, 1696, 1821, 1848, 1982
CaiI	CAGNNNCTG	1 cut(s)	515
CfoI	GCGC	3 cut(s)	26, 138, 415
Cfr10I	RCCGGY	2 cut(s)	1363, 1648
Cfr13I	GGNCC	9 cut(s)	47, 57, 323, 842, 1273, 1535, 1616, 1651, 1658
CseI	GACGC	2 cut(s)	2062, 2062
CsiI	ACCWGGT	4 cut(s)	1513, 1548, 1608, 1947
Csp6I	GTAC	3 cut(s)	654, 674, 1903
CspAI	ACCGGT	1 cut(s)	1648
CviAII	CATG	8 cut(s)	37, 61, 227, 251, 269, 565, 761, 1117
CviQI	GTAC	3 cut(s)	654, 674, 1903
DdeI	CTNAG	7 cut(s)	459, 498, 516, 614, 1004, 1128, 1425
DpnI	GATC	8 cut(s)	290, 400, 480, 889, 987, 999, 1399, 1764
DpnII	GATC	8 cut(s)	288, 398, 478, 887, 985, 997, 1397, 1762
DraIII	CACNNNGTG	1 cut(s)	1517
DrdI	GACNNNNNNGTC	1 cut(s)	269
DseDI	GACNNNNNNGTC	1 cut(s)	269
Eam1104I	CTCTTC	1 cut(s)	1648
EarI	CTCTTC	1 cut(s)	1648
Eco130I	CCWWGG	3 cut(s)	139, 1494, 1654
Eco31I	GGTCTC	1 cut(s)	2007
Eco32I	GATATC	1 cut(s)	338
Eco47I	GGWCC	7 cut(s)	47, 323, 842, 1273, 1535, 1616, 1651
Eco57I	CTGAAG	5 cut(s)	1772, 1817, 1844, 1874, 2057
EcoO109I	RGGNCCY	2 cut(s)	1273, 1535
EcoRI	GAATTC	1 cut(s)	151
EcoRV	GATATC	1 cut(s)	338
EcoT14I	CCWWGG	3 cut(s)	139, 1494, 1654
EcoT22I	ATGCAT	1 cut(s)	228
ErhI	CCWWGG	3 cut(s)	139, 1494, 1654
FaeI	CATG	8 cut(s)	40, 64, 230, 254, 272, 568, 764, 1120
FalI	AAGNNNNNCTT	4 cut(s)	150, 182, 597, 629
FaqI	GGGAC	6 cut(s)	336, 1077, 1121, 1259, 1548, 1733
FatI	CATG	8 cut(s)	36, 60, 226, 250, 268, 564, 760, 1116
FauNDI	CATATG	2 cut(s)	83, 222
FokI	GGATG	7 cut(s)	125, 581, 710, 1006, 1143, 1512, 1972
FspBI	CTAG	4 cut(s)	752, 848, 1620, 1745
GlaI	GCGC	3 cut(s)	25, 137, 414
GsuI	CTGGAG	1 cut(s)	399
HaeII	RGCGCY	1 cut(s)	139
HaeIII	GGCC	5 cut(s)	59, 983, 1660, 1698, 1993
HapII	CCGG	8 cut(s)	98, 260, 794, 909, 1364, 1373, 1649, 1994
HgaI	GACGC	2 cut(s)	2062, 2062
HhaI	GCGC	3 cut(s)	26, 138, 415
Hin1I	GRCGYC	1 cut(s)	2054
Hin1II	CATG	8 cut(s)	40, 64, 230, 254, 272, 568, 764, 1120
Hin6I	GCGC	3 cut(s)	24, 136, 413
HinP1I	GCGC	3 cut(s)	24, 136, 413
HincII	GTYRAC	4 cut(s)	643, 685, 853, 2023
HindII	GTYRAC	4 cut(s)	643, 685, 853, 2023
HindIII	AAGCTT	1 cut(s)	312
HinfI	GANTC	4 cut(s)	404, 701, 1464, 1675
HpaI	GTTAAC	1 cut(s)	685
HpaII	CCGG	8 cut(s)	98, 260, 794, 909, 1364, 1373, 1649, 1994
HphI	GGTGA	9 cut(s)	16, 637, 1017, 1022, 1182, 1362, 1377, 1503, 1638
Hpy166II	GTNNAC	6 cut(s)	643, 676, 685, 853, 1385, 2023
Hpy188I	TCNGA	8 cut(s)	403, 462, 486, 549, 1301, 1332, 2012, 2078
Hpy188III	TCNNGA	7 cut(s)	50, 378, 476, 777, 1138, 1246, 1461
Hpy8I	GTNNAC	6 cut(s)	643, 676, 685, 853, 1385, 2023
Hpy99I	CGWCG	1 cut(s)	2056
HpyAV	CCTTC	7 cut(s)	103, 513, 1197, 1796, 1841, 1868, 1898
HpyCH4III	ACNGT	3 cut(s)	183, 1281, 1907
HpyCH4IV	ACGT	1 cut(s)	745
HpyF10VI	GCNNNNNNNGC	9 cut(s)	30, 821, 1046, 1316, 1360, 1691, 1843, 1876, 1990
HpyF3I	CTNAG	7 cut(s)	459, 498, 516, 614, 1004, 1128, 1425
HpySE526I	ACGT	1 cut(s)	745
Hsp92I	GRCGYC	1 cut(s)	2054
Hsp92II	CATG	8 cut(s)	40, 64, 230, 254, 272, 568, 764, 1120
HspAI	GCGC	3 cut(s)	24, 136, 413
KflI	GGGWCCC	1 cut(s)	1273
KroI	GCCGGC	1 cut(s)	1363
KroNI	GCCGGC	1 cut(s)	1365
KspAI	GTTAAC	1 cut(s)	685
Kzo9I	GATC	8 cut(s)	288, 398, 478, 887, 985, 997, 1397, 1762
LmnI	GCTCC	4 cut(s)	380, 821, 1318, 1963
LweI	GCATC	2 cut(s)	1027, 1780
MabI	ACCWGGT	4 cut(s)	1513, 1548, 1608, 1947
MaeI	CTAG	4 cut(s)	752, 848, 1620, 1745
MaeII	ACGT	1 cut(s)	745
MaeIII	GTNAC	3 cut(s)	77, 1341, 1486
MalI	GATC	8 cut(s)	290, 400, 480, 889, 987, 999, 1399, 1764
MbiI	CCGCTC	1 cut(s)	1958
MboI	GATC	8 cut(s)	288, 398, 478, 887, 985, 997, 1397, 1762
MboII	GAAGA	4 cut(s)	292, 740, 992, 1635
MflI	RGATCY	3 cut(s)	398, 887, 997
MhlI	GDGCHC	1 cut(s)	826
MlyI	GAGTC	1 cut(s)	1669
MmeI	TCCRAC	2 cut(s)	165, 974
Mph1103I	ATGCAT	1 cut(s)	228
MroNI	GCCGGC	1 cut(s)	1363
MroXI	GAANNNNTTC	1 cut(s)	705
MseI	TTAA	6 cut(s)	120, 176, 684, 924, 1086, 1164
MslI	CAYNNNNRTG	3 cut(s)	225, 709, 1670
MspA1I	CMGCKG	1 cut(s)	2066
MspI	CCGG	8 cut(s)	98, 260, 794, 909, 1364, 1373, 1649, 1994
Mva1269I	GAATGC	2 cut(s)	556, 1102
MvnI	CGCG	1 cut(s)	24
MwoI	GCNNNNNNNGC	9 cut(s)	30, 821, 1046, 1316, 1360, 1691, 1843, 1876, 1990
NaeI	GCCGGC	1 cut(s)	1365
NciI	CCSGG	2 cut(s)	98, 1374
NdeI	CATATG	2 cut(s)	83, 222
NdeII	GATC	8 cut(s)	288, 398, 478, 887, 985, 997, 1397, 1762
NgoMIV	GCCGGC	1 cut(s)	1363
NlaIII	CATG	8 cut(s)	40, 64, 230, 254, 272, 568, 764, 1120
NlaIV	GGNNCC	5 cut(s)	324, 907, 1274, 1275, 1536
NmuCI	GTSAC	2 cut(s)	77, 1341
NsiI	ATGCAT	1 cut(s)	228
NspI	RCATGY	3 cut(s)	40, 230, 1120
OliI	CACNNNNGTG	1 cut(s)	709
PasI	CCCWGGG	2 cut(s)	1416, 1531
PciI	ACATGT	1 cut(s)	1116
PcsI	WCGNNNNNNNCGW	2 cut(s)	1911, 2016
PctI	GAATGC	2 cut(s)	556, 1102
PdiI	GCCGGC	1 cut(s)	1365
PdmI	GAANNNNTTC	1 cut(s)	705
PfeI	GAWTC	3 cut(s)	404, 701, 1464
PflFI	GACNNNGTC	1 cut(s)	1019
PflMI	CCANNNNNTGG	1 cut(s)	1394
PinAI	ACCGGT	1 cut(s)	1648
PleI	GAGTC	1 cut(s)	1669
PpsI	GAGTC	1 cut(s)	1669
PpuMI	RGGWCCY	2 cut(s)	1273, 1535
PscI	ACATGT	1 cut(s)	1116
PshBI	ATTAAT	1 cut(s)	1164
Psp5II	RGGWCCY	2 cut(s)	1273, 1535
PspN4I	GGNNCC	5 cut(s)	324, 907, 1274, 1275, 1536
PspPI	GGNCC	9 cut(s)	47, 57, 323, 842, 1273, 1535, 1616, 1651, 1658
PspPPI	RGGWCCY	2 cut(s)	1273, 1535
PstI	CTGCAG	3 cut(s)	511, 814, 1356
PstNI	CAGNNNCTG	1 cut(s)	515
PsuI	RGATCY	3 cut(s)	398, 887, 997
PsyI	GACNNNGTC	1 cut(s)	1019
PvuII	CAGCTG	1 cut(s)	2066
RsaI	GTAC	3 cut(s)	655, 675, 1904
RsaNI	GTAC	3 cut(s)	654, 674, 1903
RseI	CAYNNNNRTG	3 cut(s)	225, 709, 1670
SaqAI	TTAA	6 cut(s)	120, 176, 684, 924, 1086, 1164
Sau3AI	GATC	8 cut(s)	288, 398, 478, 887, 985, 997, 1397, 1762
Sau96I	GGNCC	9 cut(s)	47, 57, 323, 842, 1273, 1535, 1616, 1651, 1658
SchI	GAGTC	1 cut(s)	1669
SduI	GDGCHC	1 cut(s)	826
SexAI	ACCWGGT	4 cut(s)	1513, 1548, 1608, 1947
SfaNI	GCATC	2 cut(s)	1027, 1780
SfcI	CTRYAG	3 cut(s)	507, 810, 1352
SinI	GGWCC	7 cut(s)	47, 323, 842, 1273, 1535, 1616, 1651
SmiMI	CAYNNNNRTG	3 cut(s)	225, 709, 1670
SmlI	CTYRAG	2 cut(s)	529, 895
SmoI	CTYRAG	2 cut(s)	529, 895
SpeI	ACTAGT	1 cut(s)	1744
SsiI	CCGC	3 cut(s)	695, 1008, 1956
SspMI	CTAG	4 cut(s)	752, 848, 1620, 1745
StyI	CCWWGG	3 cut(s)	139, 1494, 1654
TaaI	ACNGT	3 cut(s)	183, 1281, 1907
TaiI	ACGT	1 cut(s)	748
TaqI	TCGA	4 cut(s)	69, 689, 1113, 1462
TaqII	GACCGA	2 cut(s)	35, 340
TfiI	GAWTC	3 cut(s)	404, 701, 1464
Tru1I	TTAA	6 cut(s)	120, 176, 684, 924, 1086, 1164
Tru9I	TTAA	6 cut(s)	120, 176, 684, 924, 1086, 1164
TscAI	CASTG	8 cut(s)	186, 653, 862, 1050, 1132, 1356, 1399, 1485
TseFI	GTSAC	2 cut(s)	77, 1341
Tsp45I	GTSAC	2 cut(s)	77, 1341
TspDTI	ATGAA	6 cut(s)	77, 209, 714, 743, 777, 1949
TspGWI	ACGGA	3 cut(s)	834, 1266, 1903
TspRI	CASTG	8 cut(s)	186, 653, 862, 1050, 1132, 1356, 1399, 1485
Tth111I	GACNNNGTC	1 cut(s)	1019
Van91I	CCANNNNNTGG	1 cut(s)	1394
VpaK11BI	GGWCC	7 cut(s)	47, 323, 842, 1273, 1535, 1616, 1651
VspI	ATTAAT	1 cut(s)	1164
XapI	RAATTY	4 cut(s)	151, 463, 543, 1216
XceI	RCATGY	3 cut(s)	40, 230, 1120
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1413
XmnI	GAANNNNTTC	1 cut(s)	705
XspI	CTAG	4 cut(s)	752, 848, 1620, 1745
Zsp2I	ATGCAT	1 cut(s)	228

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.