pycom15g12720

Histone deacetylation protein Rxt3

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0005647
Physical Location & Seq
Forward (+)
8711409 .. 8721224
9816 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2421 bp
ATGAGTGGTCCGCCTAAACGACCTCACGAAGAGAGTGGTCATTCCTCCTCTTCCAAATACCCGCATCCTCACCCGCACCCACAACCACATGACGATTCCGGACCATACCCCAAGCTCTCATCCTCTGTTTCCAATGAATACCATCCTCCCTATGACATTGGCCCCGATGCTCGCTTGCCCAAGATTCCCCGCACCGATTCTCGCGACCCTGATAGGCGATCTCCCCTCCACTCAATCTATCGAATGCCCTCGAATTCTAGTGATATGCACATAGATCATCCTTCGGCTCCCGACAATAGATTGGAGTCCAGGGACACTAGAGATGTTCGCTTTGAGAACCGAGACACAAAGACAGATGCAAGAGAGTTGTACAACGACACAAGAAGGGATGCTCAGAGTTCTAAGGGTGAAAAAGAGGTAAGGTATGACAGCAGAGGAGATGACAACAAGGAGGTCAAATATGAAAGGCAGAATTTTAACGATCTTAAGGCTGACCCCAAAATGGAAGGTTATGCTCTGGCCACTAGTCACTTGAACTGGAAAGAATCAAAAGATTACCATAGAGGAAAACGACATTCCGATGCCCCACCCGCAACTACAGACACCTGGCATCGCGGCAGTTCTCAAGGCCACGTTGAAGTTGGAAAGGAACTTCCCACTACGGAGGAGCGGGATCATGTTGAGGCACATGAGGCTGTTGGGGAAAACAAGTTTGATTCTAAAGGTGATGATAAATTCAAAGAAAAGGATAGAAAAAGGAAAGATGCAAAGCACCGGGATTGGGGCGAAAAGGATAAGGAAAGAAGTGATCGTAGGACTAGTATTCAAGTAGCTATCAGCAGTGAGGGCAAAGAACCAGCAAAGGAAGAAAGAGATGCAGAGAGGTCGGAGAGGGAGAGGAGGGACACTGGAAAAGACAAAGAAAGAGTAAGAGAGCGGGAAAGGGATCATACCAAGAGAGACCCATGGAATGGAGTAGACAAAGATGGTTCGAATAATGAGAAGGAAGTTGGTGATGGATCTATTAGAATGTCAGAGCAGGATAATCTTCCGCCAGAGCAAAAGAAACAGAAAGATTTTGACAGTTGGAGAACTGTCGATAGGGAATCTAGAGACAGGAGGAAAGAAAGAGATGTTGATGTTGAAGGAGATAGAGCTGAAAAGCAGCGTAGGGGATATGACAAAGAATCAGATGATGGATGTGCAGATGGTGAAGGGGCCACAGACAGAGAAAGGGAAGTCTATAATCATGGAGTTCAGCGTAAAAGGATGCAACGGTCAAGGGGTAGCCCTCTGGTGGCAAACCATGATCTGCGTTTTAGGTCGCGCATTCAAGACAATGAAGGATCCCAAGGTAAAAGTGAAGTATCACCTGTTGTTTATAAAGTTGGCGAATGCATGCAAGAACTGATAAAAGTCTGGAAGGAATATGAAGCATCTCCAGGTGAAAAAAGTGGTGAAAGTTCTCTTACTGGTCCAACCCTTGAGATTCGGATTCCAGCTGAACATGTTACCGCAACAAATCGCCAAGTTAGAGGTGGCCAGCTATGGGGGACAGATATATACACAGATGATTCTGATCTCGTTGCTGTACTCATGCACACAGGATATTGCCGGCCCACAGCATCTCCTCCGCCTCCTGCTATCCAGGAGTTGCGTGCTACAGTTCGAGTATTACCTCCACAAGACTGTTACATTTCGTCACTGAGAAACAATGTTCGATCGCGTGCGTGGGGAGCTGCAATTGGTTGTAGTTTCCGTGTTGAGCGCTGTTGCATCGTCAAGAAAGCGGGTGGAACCATTGATCTTGAAGCTTGTCTTACACATACTTCTACGGTGGAGCCTACCCTTGCTCCAGTGATTGTGGAGCGCTCAATGACTACAAGGGCTGCAGCTTCGAATGCATTGCGACAACAGAGATTCGTACGAGAAGTTACAATACAGTACAACCTCTGCAATGAGCCTTGGATTAAGTATAGTATAAGCATTGTTGCTGACAAGGGTTTGAAGAAAACCCTGTATACTTCTGCGCGTCTGAAGAAGGGAGAAGTTCTGTACTTAGAAACACATTCATGCAGGTATGAGCTCTGTTTTACCGGAGAGAAAATGATCAAAGCTGCGCAGCTGTCTCAGATGCACGAAGGCGAGACAGAGAAGAGTCAAAAGCATGTCTCACATTCCACCAATGGTGAAAGAAATGATTCTGATAACATCATGGTTGATGTCTTCCGTTGGTCTCTATGTAAAACGCCTCTTCCCCAGAAGGTCCTGCGGTCAGTTGGGATCCCACTTCCCCTTGACTATGTGGAGGTTTTGGAGGAGAATCTTGACTGGGAGGACGTGCAGTGGTCGCAGACGGGTGTTTGGATTGCTGGGAAAGAGTACACACTTGCTCGGGTGCATTTTCTGTCGACAAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Rxt3

Protein Analysis

807

Amino Acids

92.24

Weight (kDa)

6.68

Isoelectric Point (pI)

46.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rxt3 PF08642 496 - 539 1.4e-11 Histone deacetylation protein Rxt3
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1383
Acc16I TGCGCA 1 cut(s) 2121
Acc36I ACCTGC 1 cut(s) 2067
AccB7I CCANNNNNTGG 1 cut(s) 971
AccBSI CCGCTC 2 cut(s) 670, 937
AccI GTMKAC 3 cut(s) 978, 2021, 2411
AccII CGCG 5 cut(s) 204, 615, 1327, 1726, 2032
AccIII TCCGGA 1 cut(s) 98
AclWI GGATC 7 cut(s) 681, 954, 1027, 1341, 1354, 2278, 2291
AcoI YGGCCR 2 cut(s) 519, 1540
AcsI RAATTY 3 cut(s) 253, 472, 734
AcuI CTGAAG 1 cut(s) 2057
AfaI GTAC 6 cut(s) 371, 1593, 1926, 1946, 2057, 2384
AfeI AGCGCT 2 cut(s) 1769, 1871
AfiI CCNNNNNNNGG 5 cut(s) 502, 781, 971, 1297, 1549
AflII CTTAAG 1 cut(s) 485
AflIII ACRYGT 1 cut(s) 1507
AgsI TTSAA 8 cut(s) 535, 638, 739, 827, 1145, 1334, 1811, 2008
AhlI ACTAGT 2 cut(s) 524, 818
AjiI CACGTC 1 cut(s) 2341
AjnI CCWGG 4 cut(s) 308, 605, 1441, 1647
Alw21I GWGCWC 1 cut(s) 2088
Alw26I GTCTC 7 cut(s) 336, 954, 1107, 2133, 2141, 2176, 2241
AlwI GGATC 7 cut(s) 681, 954, 1027, 1341, 1354, 2278, 2291
Ama87I CYCGRG 1 cut(s) 2394
Aor13HI TCCGGA 1 cut(s) 98
Aor51HI AGCGCT 2 cut(s) 1769, 1871
AoxI GGCC 6 cut(s) 160, 519, 628, 1218, 1540, 1616
ApeKI GCWGC 6 cut(s) 1165, 1739, 1889, 1892, 2117, 2122
ApoI RAATTY 3 cut(s) 253, 472, 734
Asp700I GAANNNNTTC 1 cut(s) 2200
AspLEI GCGC 5 cut(s) 1329, 1770, 1872, 2032, 2122
AspS9I GGNCC 7 cut(s) 8, 101, 161, 1218, 1475, 1617, 2266
AsuC2I CCSGG 1 cut(s) 776
AsuHPI GGTGA 9 cut(s) 62, 419, 737, 1025, 1223, 1362, 1457, 1469, 2201
AsuII TTCGAA 2 cut(s) 992, 1898
AvaI CYCGRG 1 cut(s) 2394
AvaII GGWCC 4 cut(s) 8, 101, 1475, 2266
BalI TGGCCA 2 cut(s) 521, 1542
BamHI GGATCC 2 cut(s) 1346, 2283
BanII GRGCYC 1 cut(s) 2088
BarI GAAGNNNNNNTAC 2 cut(s) 1923, 1955
BbsI GAAGAC 1 cut(s) 2218
Bbv12I GWGCWC 1 cut(s) 2088
BbvI GCAGC 6 cut(s) 1177, 1726, 1876, 1904, 2104, 2134
BccI CCATC 5 cut(s) 150, 980, 1010, 1190, 1202
BcgI CGANNNNNNTGC 4 cut(s) 867, 901, 1888, 1922
BciT130I CCWGG 4 cut(s) 310, 607, 1443, 1649
BclI TGATCA 1 cut(s) 2109
BcnI CCSGG 1 cut(s) 776
BcoDI GTCTC 7 cut(s) 336, 954, 1107, 2133, 2141, 2176, 2241
BcuI ACTAGT 2 cut(s) 524, 818
BfaI CTAG 5 cut(s) 258, 318, 525, 819, 1110
BfmI CTRYAG 3 cut(s) 597, 1662, 1890
BfoI RGCGCY 2 cut(s) 1771, 1873
BfrI CTTAAG 1 cut(s) 485
BfuAI ACCTGC 1 cut(s) 2067
BisI GCNGC 7 cut(s) 616, 1166, 1740, 1890, 1893, 2118, 2123
BlsI GCNGC 7 cut(s) 617, 1167, 1741, 1891, 1894, 2119, 2124
Bme1390I CCNGG 5 cut(s) 310, 607, 776, 1443, 1649
Bme18I GGWCC 4 cut(s) 8, 101, 1475, 2266
BmeT110I CYCGRG 1 cut(s) 2394
BmgBI CACGTC 1 cut(s) 2341
BmgT120I GGNCC 7 cut(s) 8, 101, 161, 1218, 1475, 1617, 2266
BmiI GGNNCC 7 cut(s) 163, 288, 1219, 1348, 1798, 1842, 2285
BmrFI CCNGG 5 cut(s) 310, 607, 776, 1443, 1649
BmrI ACTGGG 1 cut(s) 2341
BmuI ACTGGG 1 cut(s) 2341
BpiI GAAGAC 1 cut(s) 2218
BpmI CTGGAG 2 cut(s) 1425, 1839
Bpu14I TTCGAA 2 cut(s) 992, 1898
BpuEI CTTGAG 2 cut(s) 609, 1505
BpuMI CCSGG 1 cut(s) 776
BsaBI GATNNNNATC 1 cut(s) 1578
BsaI GGTCTC 2 cut(s) 954, 2241
BsaJI CCNNGG 4 cut(s) 309, 965, 1351, 1964
BsaWI WCCGGW 2 cut(s) 98, 2096
BsaXI ACNNNNNCTCC 4 cut(s) 1612, 1642, 1837, 1867
Bsc4I CCNNNNNNNGG 5 cut(s) 502, 781, 971, 1297, 1549
Bse118I RCCGGY 1 cut(s) 1614
Bse1I ACTGG 5 cut(s) 542, 913, 1477, 1856, 2336
Bse3DI GCAATG 2 cut(s) 1904, 1963
Bse8I GATNNNNATC 1 cut(s) 1578
BseAI TCCGGA 1 cut(s) 98
BseBI CCWGG 4 cut(s) 310, 607, 1443, 1649
BseDI CCNNGG 4 cut(s) 309, 965, 1351, 1964
BseGI GGATG 7 cut(s) 64, 119, 142, 277, 394, 1205, 1275
BseJI GATNNNNATC 1 cut(s) 1578
BseLI CCNNNNNNNGG 5 cut(s) 502, 781, 971, 1297, 1549
BseMI GCAATG 2 cut(s) 1904, 1963
BseMII CTCAG 3 cut(s) 407, 1697, 2144
BseNI ACTGG 5 cut(s) 542, 913, 1477, 1856, 2336
BseRI GAGGAG 6 cut(s) 37, 450, 680, 913, 1620, 2333
BseXI GCAGC 6 cut(s) 1177, 1726, 1876, 1904, 2104, 2134
BseYI CCCAGC 1 cut(s) 2372
BsgI GTGCAG 2 cut(s) 1224, 2363
Bsh1236I CGCG 5 cut(s) 204, 615, 1327, 1726, 2032
Bsh1285I CGRYCG 1 cut(s) 1724
BshFI GGCC 6 cut(s) 162, 521, 630, 1220, 1542, 1618
BsiEI CGRYCG 1 cut(s) 1724
BsiHKAI GWGCWC 1 cut(s) 2088
BsiHKCI CYCGRG 1 cut(s) 2394
BsiSI CCGG 4 cut(s) 99, 775, 1615, 2097
BsiWI CGTACG 1 cut(s) 1924
BslFI GGGAC 3 cut(s) 326, 917, 1567
BslI CCNNNNNNNGG 5 cut(s) 502, 781, 971, 1297, 1549
BsmAI GTCTC 7 cut(s) 336, 954, 1107, 2133, 2141, 2176, 2241
BsmFI GGGAC 3 cut(s) 326, 917, 1567
BsmI GAATGC 4 cut(s) 249, 1329, 1400, 1906
BsnI GGCC 6 cut(s) 162, 521, 630, 1220, 1542, 1618
Bso31I GGTCTC 2 cut(s) 954, 2241
BsoBI CYCGRG 1 cut(s) 2394
Bsp119I TTCGAA 2 cut(s) 992, 1898
Bsp1286I GDGCHC 1 cut(s) 2088
Bsp13I TCCGGA 1 cut(s) 98
Bsp1407I TGTACA 1 cut(s) 369
Bsp19I CCATGG 1 cut(s) 965
Bsp68I TCGCGA 1 cut(s) 204
BspANI GGCC 6 cut(s) 162, 521, 630, 1220, 1542, 1618
BspCNI CTCAG 3 cut(s) 406, 1698, 2143
BspEI TCCGGA 1 cut(s) 98
BspFNI CGCG 5 cut(s) 204, 615, 1327, 1726, 2032
BspLI GGNNCC 7 cut(s) 163, 288, 1219, 1348, 1798, 1842, 2285
BspMAI CTGCAG 1 cut(s) 1894
BspMI ACCTGC 1 cut(s) 2067
BspPI GGATC 7 cut(s) 681, 954, 1027, 1341, 1354, 2278, 2291
BspT104I TTCGAA 2 cut(s) 992, 1898
BspTI CTTAAG 1 cut(s) 485
BspTNI GGTCTC 2 cut(s) 954, 2241
BsrBI CCGCTC 2 cut(s) 670, 937
BsrDI GCAATG 2 cut(s) 1904, 1963
BsrFI RCCGGY 1 cut(s) 1614
BsrGI TGTACA 1 cut(s) 369
BsrI ACTGG 5 cut(s) 542, 913, 1477, 1856, 2336
BssAI RCCGGY 1 cut(s) 1614
BssECI CCNNGG 4 cut(s) 309, 965, 1351, 1964
BssNAI GTATAC 1 cut(s) 2022
BssT1I CCWWGG 3 cut(s) 965, 1351, 1964
Bst1107I GTATAC 1 cut(s) 2022
Bst2UI CCWGG 4 cut(s) 310, 607, 1443, 1649
Bst4CI ACNGT 7 cut(s) 1085, 1096, 1278, 1666, 1691, 1837, 1944
Bst6I CTCTTC 4 cut(s) 24, 55, 2150, 2259
BstAFI CTTAAG 1 cut(s) 485
BstAUI TGTACA 1 cut(s) 369
BstBI TTCGAA 2 cut(s) 992, 1898
BstC8I GCNNGC 7 cut(s) 172, 176, 1400, 1544, 1616, 1659, 1728
BstDEI CTNAG 5 cut(s) 393, 402, 1706, 2059, 2130
BstDSI CCRYGG 1 cut(s) 965
BstF5I GGATG 7 cut(s) 64, 119, 142, 277, 394, 1205, 1275
BstFNI CGCG 5 cut(s) 204, 615, 1327, 1726, 2032
BstH2I RGCGCY 2 cut(s) 1771, 1873
BstHHI GCGC 5 cut(s) 1329, 1770, 1872, 2032, 2122
BstMAI GTCTC 7 cut(s) 336, 954, 1107, 2133, 2141, 2176, 2241
BstMCI CGRYCG 1 cut(s) 1724
BstMWI GCNNNNNNNGC 6 cut(s) 590, 692, 846, 1736, 1901, 2350
BstNI CCWGG 4 cut(s) 310, 607, 1443, 1649
BstNSI RCATGY 3 cut(s) 1402, 1511, 2171
BstSCI CCNGG 5 cut(s) 308, 605, 774, 1441, 1647
BstSFI CTRYAG 3 cut(s) 597, 1662, 1890
BstUI CGCG 5 cut(s) 204, 615, 1327, 1726, 2032
BstV1I GCAGC 6 cut(s) 1177, 1726, 1876, 1904, 2104, 2134
BstV2I GAAGAC 1 cut(s) 2218
BstX2I RGATCY 3 cut(s) 1019, 1346, 2283
BstYI RGATCY 3 cut(s) 1019, 1346, 2283
BstZ17I GTATAC 1 cut(s) 2022
BsuRI GGCC 6 cut(s) 162, 521, 630, 1220, 1542, 1618
BtgI CCRYGG 1 cut(s) 965
BtgZI GCGATG 1 cut(s) 596
BtrI CACGTC 1 cut(s) 2341
BtsCI GGATG 7 cut(s) 64, 119, 142, 277, 394, 1205, 1275
BtsI GCAGTG 2 cut(s) 847, 2351
BtsIMutI CAGTG 5 cut(s) 847, 906, 1703, 1863, 2351
BtuMI TCGCGA 1 cut(s) 204
BveI ACCTGC 1 cut(s) 2067
Cac8I GCNNGC 7 cut(s) 172, 176, 1400, 1544, 1616, 1659, 1728
CfoI GCGC 5 cut(s) 1329, 1770, 1872, 2032, 2122
Cfr10I RCCGGY 1 cut(s) 1614
Cfr13I GGNCC 7 cut(s) 8, 101, 161, 1218, 1475, 1617, 2266
CseI GACGC 1 cut(s) 2021
Csp6I GTAC 6 cut(s) 370, 1592, 1925, 1945, 2056, 2383
CviQI GTAC 6 cut(s) 370, 1592, 1925, 1945, 2056, 2383
DdeI CTNAG 5 cut(s) 393, 402, 1706, 2059, 2130
EaeI YGGCCR 2 cut(s) 519, 1540
Eam1104I CTCTTC 4 cut(s) 24, 55, 2150, 2259
EarI CTCTTC 4 cut(s) 24, 55, 2150, 2259
EciI GGCGGA 2 cut(s) 1041, 1623
Ecl136II GAGCTC 1 cut(s) 2086
Eco130I CCWWGG 3 cut(s) 965, 1351, 1964
Eco24I GRGCYC 1 cut(s) 2088
Eco31I GGTCTC 2 cut(s) 954, 2241
Eco47I GGWCC 4 cut(s) 8, 101, 1475, 2266
Eco47III AGCGCT 2 cut(s) 1769, 1871
Eco53kI GAGCTC 1 cut(s) 2086
Eco57I CTGAAG 1 cut(s) 2057
Eco88I CYCGRG 1 cut(s) 2394
EcoICRI GAGCTC 1 cut(s) 2086
EcoO109I RGGNCCY 1 cut(s) 2266
EcoRI GAATTC 1 cut(s) 253
EcoRII CCWGG 4 cut(s) 308, 605, 1441, 1647
EcoT14I CCWWGG 3 cut(s) 965, 1351, 1964
EcoT22I ATGCAT 2 cut(s) 1400, 1906
EcoT38I GRGCYC 1 cut(s) 2088
ErhI CCWWGG 3 cut(s) 965, 1351, 1964
FalI AAGNNNNNCTT 2 cut(s) 1803, 1835
FaqI GGGAC 3 cut(s) 326, 917, 1567
FauI CCCGC 7 cut(s) 69, 81, 197, 598, 663, 930, 1783
FbaI TGATCA 1 cut(s) 2109
FblI GTMKAC 3 cut(s) 978, 2021, 2411
Fnu4HI GCNGC 7 cut(s) 616, 1166, 1740, 1890, 1893, 2118, 2123
FokI GGATG 7 cut(s) 51, 106, 129, 264, 401, 1212, 1282
FriOI GRGCYC 1 cut(s) 2088
Fsp4HI GCNGC 7 cut(s) 616, 1166, 1740, 1890, 1893, 2118, 2123
FspBI CTAG 5 cut(s) 258, 318, 525, 819, 1110
FspI TGCGCA 1 cut(s) 2121
GlaI GCGC 5 cut(s) 1328, 1769, 1871, 2031, 2121
GluI GCNGC 7 cut(s) 616, 1166, 1740, 1890, 1893, 2118, 2123
GsaI CCCAGC 1 cut(s) 2376
GsuI CTGGAG 2 cut(s) 1425, 1839
HaeII RGCGCY 2 cut(s) 1771, 1873
HaeIII GGCC 6 cut(s) 162, 521, 630, 1220, 1542, 1618
HapII CCGG 4 cut(s) 99, 775, 1615, 2097
HgaI GACGC 1 cut(s) 2021
HhaI GCGC 5 cut(s) 1329, 1770, 1872, 2032, 2122
Hin6I GCGC 5 cut(s) 1327, 1768, 1870, 2030, 2120
HinP1I GCGC 5 cut(s) 1327, 1768, 1870, 2030, 2120
HincII GTYRAC 1 cut(s) 2412
HindII GTYRAC 1 cut(s) 2412
HindIII AAGCTT 1 cut(s) 1812
HpaII CCGG 4 cut(s) 99, 775, 1615, 2097
HphI GGTGA 9 cut(s) 62, 419, 737, 1025, 1223, 1362, 1457, 1469, 2201
Hpy166II GTNNAC 4 cut(s) 979, 2022, 2385, 2412
Hpy8I GTNNAC 4 cut(s) 979, 2022, 2385, 2412
HpyCH4III ACNGT 7 cut(s) 1085, 1096, 1278, 1666, 1691, 1837, 1944
HpyCH4IV ACGT 2 cut(s) 633, 2340
HpyF10VI GCNNNNNNNGC 6 cut(s) 590, 692, 846, 1736, 1901, 2350
HpyF3I CTNAG 5 cut(s) 393, 402, 1706, 2059, 2130
HpySE526I ACGT 2 cut(s) 633, 2340
HspAI GCGC 5 cut(s) 1327, 1768, 1870, 2030, 2120
Kpn2I TCCGGA 1 cut(s) 98
KroI GCCGGC 1 cut(s) 1614
KroNI GCCGGC 1 cut(s) 1616
Ksp22I TGATCA 1 cut(s) 2109
LmnI GCTCC 6 cut(s) 292, 667, 1736, 1840, 1858, 1867
Lsp1109I GCAGC 6 cut(s) 1177, 1726, 1876, 1904, 2104, 2134
MaeI CTAG 5 cut(s) 258, 318, 525, 819, 1110
MaeII ACGT 2 cut(s) 633, 2340
MaeIII GTNAC 5 cut(s) 527, 1510, 1691, 1701, 1933
MbiI CCGCTC 2 cut(s) 670, 937
MboII GAAGA 9 cut(s) 41, 42, 878, 1040, 2020, 2050, 2167, 2218, 2246
MfeI CAATTG 1 cut(s) 1743
MflI RGATCY 3 cut(s) 1019, 1346, 2283
MhlI GDGCHC 1 cut(s) 2088
MlsI TGGCCA 2 cut(s) 521, 1542
MluCI AATT 5 cut(s) 253, 472, 734, 1743, 2416
MluNI TGGCCA 2 cut(s) 521, 1542
MlyI GAGTC 2 cut(s) 314, 2167
MmeI TCCRAC 4 cut(s) 622, 867, 1067, 1502
Mox20I TGGCCA 2 cut(s) 521, 1542
Mph1103I ATGCAT 2 cut(s) 1400, 1906
MroI TCCGGA 1 cut(s) 98
MroNI GCCGGC 1 cut(s) 1614
MroXI GAANNNNTTC 1 cut(s) 2200
MscI TGGCCA 2 cut(s) 521, 1542
MseI TTAA 4 cut(s) 477, 486, 1971, 2419
MslI CAYNNNNRTG 2 cut(s) 579, 2071
Msp20I TGGCCA 2 cut(s) 521, 1542
MspA1I CMGCKG 2 cut(s) 1502, 2125
MspCI CTTAAG 1 cut(s) 485
MspI CCGG 4 cut(s) 99, 775, 1615, 2097
MspR9I CCNGG 5 cut(s) 310, 607, 776, 1443, 1649
MunI CAATTG 1 cut(s) 1743
Mva1269I GAATGC 4 cut(s) 249, 1329, 1400, 1906
MvaI CCWGG 4 cut(s) 310, 607, 1443, 1649
MvnI CGCG 5 cut(s) 204, 615, 1327, 1726, 2032
MwoI GCNNNNNNNGC 6 cut(s) 590, 692, 846, 1736, 1901, 2350
NaeI GCCGGC 1 cut(s) 1616
NciI CCSGG 1 cut(s) 776
NcoI CCATGG 1 cut(s) 965
NgoMIV GCCGGC 1 cut(s) 1614
NlaIV GGNNCC 7 cut(s) 163, 288, 1219, 1348, 1798, 1842, 2285
NmuCI GTSAC 2 cut(s) 527, 1701
NruI TCGCGA 1 cut(s) 204
NsbI TGCGCA 1 cut(s) 2121
NsiI ATGCAT 2 cut(s) 1400, 1906
NspI RCATGY 3 cut(s) 1402, 1511, 2171
NspV TTCGAA 2 cut(s) 992, 1898
PaeI GCATGC 1 cut(s) 1402
PciI ACATGT 1 cut(s) 1507
PctI GAATGC 4 cut(s) 249, 1329, 1400, 1906
PdiI GCCGGC 1 cut(s) 1616
PdmI GAANNNNTTC 1 cut(s) 2200
Pfl23II CGTACG 1 cut(s) 1924
PflMI CCANNNNNTGG 1 cut(s) 971
PfoI TCCNGGA 1 cut(s) 1647
PkrI GCNGC 7 cut(s) 617, 1167, 1741, 1891, 1894, 2119, 2124
Ple19I CGATCG 1 cut(s) 1724
PleI GAGTC 2 cut(s) 313, 2166
PpsI GAGTC 2 cut(s) 313, 2166
PpuMI RGGWCCY 1 cut(s) 2266
PscI ACATGT 1 cut(s) 1507
PsiI TTATAA 1 cut(s) 1383
Psp124BI GAGCTC 1 cut(s) 2088
Psp5II RGGWCCY 1 cut(s) 2266
Psp6I CCWGG 4 cut(s) 308, 605, 1441, 1647
PspFI CCCAGC 1 cut(s) 2372
PspGI CCWGG 4 cut(s) 308, 605, 1441, 1647
PspLI CGTACG 1 cut(s) 1924
PspN4I GGNNCC 7 cut(s) 163, 288, 1219, 1348, 1798, 1842, 2285
PspPI GGNCC 7 cut(s) 8, 101, 161, 1218, 1475, 1617, 2266
PspPPI RGGWCCY 1 cut(s) 2266
PstI CTGCAG 1 cut(s) 1894
PsuI RGATCY 3 cut(s) 1019, 1346, 2283
PvuI CGATCG 1 cut(s) 1724
PvuII CAGCTG 2 cut(s) 1502, 2125
RruI TCGCGA 1 cut(s) 204
RsaI GTAC 6 cut(s) 371, 1593, 1926, 1946, 2057, 2384
RsaNI GTAC 6 cut(s) 370, 1592, 1925, 1945, 2056, 2383
RseI CAYNNNNRTG 2 cut(s) 579, 2071
SacI GAGCTC 1 cut(s) 2088
SalI GTCGAC 1 cut(s) 2410
SaqAI TTAA 4 cut(s) 477, 486, 1971, 2419
SatI GCNGC 7 cut(s) 616, 1166, 1740, 1890, 1893, 2118, 2123
Sau96I GGNCC 7 cut(s) 8, 101, 161, 1218, 1475, 1617, 2266
SchI GAGTC 2 cut(s) 314, 2167
ScrFI CCNGG 5 cut(s) 310, 607, 776, 1443, 1649
SduI GDGCHC 1 cut(s) 2088
SfcI CTRYAG 3 cut(s) 597, 1662, 1890
SfuI TTCGAA 2 cut(s) 992, 1898
SinI GGWCC 4 cut(s) 8, 101, 1475, 2266
SmiMI CAYNNNNRTG 2 cut(s) 579, 2071
SmlI CTYRAG 3 cut(s) 485, 624, 1484
SmoI CTYRAG 3 cut(s) 485, 624, 1484
SpeI ACTAGT 2 cut(s) 524, 818
SphI GCATGC 1 cut(s) 1402
Sse9I AATT 5 cut(s) 253, 472, 734, 1743, 2416
SspMI CTAG 5 cut(s) 258, 318, 525, 819, 1110
SstI GAGCTC 1 cut(s) 2088
StyD4I CCNGG 5 cut(s) 308, 605, 774, 1441, 1647
StyI CCWWGG 3 cut(s) 965, 1351, 1964
TaaI ACNGT 7 cut(s) 1085, 1096, 1278, 1666, 1691, 1837, 1944
TaiI ACGT 2 cut(s) 636, 2343
TaqI TCGA 8 cut(s) 241, 251, 992, 1098, 1669, 1720, 1898, 2411
TasI AATT 5 cut(s) 253, 472, 734, 1743, 2416
TatI WGTACW 5 cut(s) 369, 1591, 1944, 2055, 2382
TauI GCSGC 1 cut(s) 618
Tru1I TTAA 4 cut(s) 477, 486, 1971, 2419
Tru9I TTAA 4 cut(s) 477, 486, 1971, 2419
TscAI CASTG 5 cut(s) 847, 913, 1710, 1863, 2351
TseFI GTSAC 2 cut(s) 527, 1701
TseI GCWGC 6 cut(s) 1165, 1739, 1889, 1892, 2117, 2122
Tsp45I GTSAC 2 cut(s) 527, 1701
TspDTI ATGAA 5 cut(s) 150, 477, 1356, 1446, 2061
TspGWI ACGGA 3 cut(s) 677, 1748, 2219
TspRI CASTG 5 cut(s) 847, 913, 1710, 1863, 2351
Van91I CCANNNNNTGG 1 cut(s) 971
Vha464I CTTAAG 1 cut(s) 485
VpaK11BI GGWCC 4 cut(s) 8, 101, 1475, 2266
XapI RAATTY 3 cut(s) 253, 472, 734
XbaI TCTAGA 1 cut(s) 1109
XceI RCATGY 3 cut(s) 1402, 1511, 2171
XcmI CCANNNNNNNNNTGG 2 cut(s) 638, 1535
XmiI GTMKAC 3 cut(s) 978, 2021, 2411
XmnI GAANNNNTTC 1 cut(s) 2200
XspI CTAG 5 cut(s) 258, 318, 525, 819, 1110
Zsp2I ATGCAT 2 cut(s) 1400, 1906
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.