Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0010512

Physical Location & Seq

Genomic Coordinates Reverse (-)

9829443 .. 9833517

Gene Structure 4075 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1599 bp

ATGATGCTAAAAGCCGAAATAGGATCCAAATCCCAAAAATATCACGTTGATATTAAAGGGCTCTCTTTCTCTCTCCTTTCTCAGTCAGCTGATTTGCTTCAATTATCATCGTTCATCACCAACTCAGCTCTCTCTCTCCTCTCTCTCTCTCTCTCTCAAATGGGTTCGAGCAGCAGTCGACTGGGCTCGCGCCCATCTCGGCCCCAAGTCAATCGCACCGCCAGTCGTTCCATACTCTCCTCTTTCGTCTGCGGTGGCTCCTCCGCACGTGCTACTCAAGAGATGGAAGATCACGCAGCTGTGTGTCTTGTGAAATGTGCAGAGCAATCTGATCGTGATATCAATCAAGTCCAGAACTCCGGAGAGGGAACCTTGTTGGTCTCCAGTACTGGATCACCGTTCACCTGCCCCATTATTGAAATTGGATCATCATCTGAGCGCATTGTTGAAGAAGGTTTAAGCAGTGTTGACACAAGTAACCAGGGGAAGTGCTTGTCCAAAAGTAAAGAACTAATACCTCTTCAGGTAAGTGCTGAATGTAGTTACGACCAATCTTGTATGGATAATAGTCCTACAGCTAGTACTTCGTTTAGACAACAACAATCTTCAGAAACAGTCTCTTTGAATCGCTCGGCTAATGTGGATGCAGTCAATGGCATTGACATTTCAGCAGACAAGAATGTATCTCAGACCTGTCCCGAGGTTATGTGTCCAAGTAGTTCGTCTCCACAAGGGATGCGGAATTCCCGTTCTCAGGAAGTGTCTGTTGAGAATCATGTGGCTGACGTAAGGGGTGTGCAAAGTTCAAATGCTGATACTGATTCTGCTAATGTTTCTGAAATTCCATCATCTTTTGACTCACGTGGAAATGATTCTCTACGGGAGGCAATACCTTCTGGTTTGGGATTCCTTGTGTCCAATAGGGAACAAGGCCAGGAAGATGGAAGTGTACTTCATGTTGACGTTATGAGCATTTCTTCCAACTTTTTGAGGAGTAGCAATGCTGATGCAAGTAATCGTGAGGCTAGAAGGAATGGCAGGCGACTGTTCTGGGATGCATTTTCAAGGCGCAGCTCCAGGAGATTCATTGATTCACCAACCATTCTTTTCTCTACTGATGATACTGAGGATATGGGATCTCATGACAGATGGCTACTTGGTTTGAGTGGTGATTTATTTGATGATGGGATTGGAGCTGATTCTGGTCACCGGGCCAGTAGAATTCCCTACTTGAATGAACGACGACGACATTCTAGATCTGAGGTTTTGGATGAAATTCACCGCCAACCTTTGTCACTTTCACTATCGATGGTCTCGGCTCCTGCCCCAGCATCTGTTGTTGATGGTTTTCCTCTTAAAAGTCACACAAAGGTTGACAAATCAAAGTCCGGGGATGATGCTGAGCAGTGTTACATATGCCTCGCTGAGTATGAGGAAGGAGACAAAATTCGAGTTCTTCCCTGCCATCACGAGTATCACATGTCCTGCGTTGACAAGTGGCTCAAAGAGATACACGGGGTTTGCCCACTTTGCCGAGGAGATGTTCGTGAGGGTTTCACCGACTGTTCTGTCTCTAACTCAGAGATATCTTCTCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000578 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0007275 GO:0007389 GO:0008134 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009790 GO:0009798 GO:0009880 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0030163 GO:0032446 GO:0032501 GO:0032502 GO:0036211 GO:0042802 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044464 GO:0048856 GO:0051603 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_11 zf-RING_2

Protein Analysis

533

Amino Acids

57.72

Weight (kDa)

5.28

Isoelectric Point (pI)

64.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-rbx1	PF12678	468 - 512	4.3e-08	RING-H2 zinc finger domain
zf-RING_2	PF13639	469 - 512	1.6e-12	Ring finger domain
zf-RING_11	PF17123	469 - 497	1.5e-08	RING-like zinc finger
zf-C3HC4_2	PF13923	469 - 511	7.1e-06	Zinc finger, C3HC4 type (RING finger)
zf-C3HC4	PF00097	470 - 511	1.9e-07	Zinc finger, C3HC4 type (RING finger)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010512)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g01770
malus_domestica	MD02G1013400.v1.1 MD15G1160200.v1.1
prunus_persica	Prupe.7G255200_v2.0.a1 Prupe.7G255200_v2.0.a1 Prupe.7G255200_v2.0.a1
pyrus_communis	pycom02g01250 pycom15g14410
rosa_chinensis	RchiOBHm_Chr2g0086731
rosa_laevigata	RLG00000015786
rosa_multiflora	Rmu_sc0000335.1_g000009 Rmu_sc0004626.1_g000001 Rmu_sc0030160.1_g000001 Rmu_sc0035211.1_g000001
rosa_roxburghii	Rroxscaffold_2G00154240
rosa_rugosa	Rorug01G0469200
rosa_samantha	Rh2AG021300 Rh2BG021200 Rh2CG022100 Rh2DG021900
rosa_wichuraiana	Rw2G001730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	413
AasI	GACNNNNNNGTC	1 cut(s)	1568
Acc36I	ACCTGC	1 cut(s)	413
AccI	GTMKAC	1 cut(s)	178
AccII	CGCG	1 cut(s)	190
AccIII	TCCGGA	1 cut(s)	359
AciI	CCGC	5 cut(s)	219, 252, 264, 739, 1282
AclWI	GGATC	5 cut(s)	18, 31, 400, 433, 1144
AcsI	RAATTY	5 cut(s)	742, 840, 1221, 1275, 1446
AcuI	CTGAAG	2 cut(s)	506, 591
AcvI	CACGTG	2 cut(s)	269, 863
AfaI	GTAC	3 cut(s)	388, 583, 951
AfiI	CCNNNNNNNGG	1 cut(s)	754
AflIII	ACRYGT	1 cut(s)	1479
AgsI	TTSAA	7 cut(s)	101, 419, 449, 625, 807, 1065, 1234
AjnI	CCWGG	3 cut(s)	480, 933, 1076
AloI	GAACNNNNNNTCC	2 cut(s)	733, 765
AluBI	AGCT	6 cut(s)	89, 128, 299, 578, 1074, 1196
AluI	AGCT	6 cut(s)	89, 128, 299, 578, 1074, 1196
Alw26I	GTCTC	6 cut(s)	385, 622, 729, 1318, 1434, 1576
AlwI	GGATC	5 cut(s)	18, 31, 400, 433, 1144
AlwNI	CAGNNNCTG	1 cut(s)	1334
Ama87I	CYCGRG	1 cut(s)	698
Aor13HI	TCCGGA	1 cut(s)	359
AoxI	GGCC	3 cut(s)	200, 931, 1212
ApeKI	GCWGC	3 cut(s)	171, 296, 1071
ApoI	RAATTY	5 cut(s)	742, 840, 1221, 1275, 1446
Asp700I	GAANNNNTTC	1 cut(s)	871
AspLEI	GCGC	3 cut(s)	192, 441, 1071
AspS9I	GGNCC	2 cut(s)	201, 1212
AsuC2I	CCSGG	2 cut(s)	1211, 1390
AsuHPI	GGTGA	8 cut(s)	109, 387, 394, 1086, 1181, 1199, 1271, 1549
AvaI	CYCGRG	1 cut(s)	698
BamHI	GGATCC	1 cut(s)	23
BanII	GRGCYC	2 cut(s)	63, 188
BauI	CACGAG	1 cut(s)	1469
BbrPI	CACGTG	2 cut(s)	269, 863
BbvI	GCAGC	3 cut(s)	183, 308, 1083
BccI	CCATC	9 cut(s)	202, 277, 853, 935, 1143, 1178, 1303, 1337, 1473
BcgI	CGANNNNNNTGC	2 cut(s)	314, 348
BciT130I	CCWGG	3 cut(s)	482, 935, 1078
BcnI	CCSGG	2 cut(s)	1211, 1390
BcoDI	GTCTC	6 cut(s)	385, 622, 729, 1318, 1434, 1576
BfaI	CTAG	3 cut(s)	579, 1026, 1254
BfmI	CTRYAG	1 cut(s)	573
BfuAI	ACCTGC	1 cut(s)	413
BglII	AGATCT	1 cut(s)	1256
BisI	GCNGC	3 cut(s)	172, 297, 1072
BlpI	GCTNAGC	1 cut(s)	1401
BlsI	GCNGC	3 cut(s)	173, 298, 1073
BmcAI	AGTACT	2 cut(s)	388, 583
Bme1390I	CCNGG	5 cut(s)	482, 935, 1078, 1211, 1390
BmeT110I	CYCGRG	1 cut(s)	698
BmgT120I	GGNCC	2 cut(s)	201, 1212
BmiI	GGNNCC	5 cut(s)	25, 203, 259, 370, 1320
BmrFI	CCNGG	5 cut(s)	482, 935, 1078, 1211, 1390
BmrI	ACTGGG	1 cut(s)	191
BmsI	GCATC	6 cut(s)	634, 726, 997, 1045, 1340, 1387
BmuI	ACTGGG	1 cut(s)	191
BpmI	CTGGAG	2 cut(s)	367, 1060
Bpu1102I	GCTNAGC	1 cut(s)	1401
BpuEI	CTTGAG	1 cut(s)	261
BpuMI	CCSGG	2 cut(s)	1211, 1390
Bsa29I	ATCGAT	1 cut(s)	1307
BsaAI	YACGTR	2 cut(s)	269, 863
BsaBI	GATNNNNATC	3 cut(s)	28, 342, 430
BsaI	GGTCTC	2 cut(s)	385, 1318
BsaJI	CCNNGG	4 cut(s)	481, 699, 1389, 1534
BsaWI	WCCGGW	1 cut(s)	359
Bsc4I	CCNNNNNNNGG	1 cut(s)	754
Bse1I	ACTGG	5 cut(s)	186, 222, 384, 394, 1215
Bse3DI	GCAATG	1 cut(s)	1006
Bse8I	GATNNNNATC	3 cut(s)	28, 342, 430
BseAI	TCCGGA	1 cut(s)	359
BseBI	CCWGG	3 cut(s)	482, 935, 1078
BseCI	ATCGAT	1 cut(s)	1307
BseDI	CCNNGG	4 cut(s)	481, 699, 1389, 1534
BseGI	GGATG	5 cut(s)	649, 741, 1060, 1276, 1399
BseJI	GATNNNNATC	3 cut(s)	28, 342, 430
BseLI	CCNNNNNNNGG	1 cut(s)	754
BseMI	GCAATG	1 cut(s)	1006
BseNI	ACTGG	5 cut(s)	186, 222, 384, 394, 1215
BseRI	GAGGAG	5 cut(s)	128, 229, 250, 1006, 1551
BseXI	GCAGC	3 cut(s)	183, 308, 1083
BseYI	CCCAGC	1 cut(s)	1327
BsgI	GTGCAG	1 cut(s)	339
Bsh1236I	CGCG	1 cut(s)	190
BshFI	GGCC	3 cut(s)	202, 933, 1214
BshVI	ATCGAT	1 cut(s)	1307
BsiHKCI	CYCGRG	1 cut(s)	698
BsiSI	CCGG	3 cut(s)	360, 1210, 1389
BslFI	GGGAC	1 cut(s)	681
BslI	CCNNNNNNNGG	1 cut(s)	754
BsmAI	GTCTC	6 cut(s)	385, 622, 729, 1318, 1434, 1576
BsmBI	CGTCTC	1 cut(s)	729
BsmFI	GGGAC	1 cut(s)	681
BsnI	GGCC	3 cut(s)	202, 933, 1214
Bso31I	GGTCTC	2 cut(s)	385, 1318
BsoBI	CYCGRG	1 cut(s)	698
Bsp1286I	GDGCHC	2 cut(s)	63, 188
Bsp13I	TCCGGA	1 cut(s)	359
Bsp143I	GATC	7 cut(s)	23, 289, 331, 392, 425, 1136, 1256
Bsp1720I	GCTNAGC	1 cut(s)	1401
BspACI	CCGC	5 cut(s)	219, 252, 264, 739, 1282
BspANI	GGCC	3 cut(s)	202, 933, 1214
BspDI	ATCGAT	1 cut(s)	1307
BspEI	TCCGGA	1 cut(s)	359
BspFNI	CGCG	1 cut(s)	190
BspHI	TCATGA	1 cut(s)	1141
BspLI	GGNNCC	5 cut(s)	25, 203, 259, 370, 1320
BspMI	ACCTGC	1 cut(s)	413
BspPI	GGATC	5 cut(s)	18, 31, 400, 433, 1144
BspTNI	GGTCTC	2 cut(s)	385, 1318
BsrDI	GCAATG	1 cut(s)	1006
BsrI	ACTGG	5 cut(s)	186, 222, 384, 394, 1215
BssECI	CCNNGG	4 cut(s)	481, 699, 1389, 1534
BssMI	GATC	7 cut(s)	23, 289, 331, 392, 425, 1136, 1256
BssSI	CACGAG	1 cut(s)	1469
Bst2BI	CACGAG	1 cut(s)	1469
Bst2UI	CCWGG	3 cut(s)	482, 935, 1078
Bst4CI	ACNGT	4 cut(s)	399, 616, 1047, 1565
Bst6I	CTCTTC	1 cut(s)	525
BstBAI	YACGTR	2 cut(s)	269, 863
BstC8I	GCNNGC	2 cut(s)	188, 1040
BstEII	GGTNACC	1 cut(s)	1205
BstF5I	GGATG	5 cut(s)	649, 741, 1060, 1276, 1399
BstFNI	CGCG	1 cut(s)	190
BstHHI	GCGC	3 cut(s)	192, 441, 1071
BstKTI	GATC	7 cut(s)	26, 292, 334, 395, 428, 1139, 1259
BstMAI	GTCTC	6 cut(s)	385, 622, 729, 1318, 1434, 1576
BstMBI	GATC	7 cut(s)	23, 289, 331, 392, 425, 1136, 1256
BstMWI	GCNNNNNNNGC	1 cut(s)	1530
BstNI	CCWGG	3 cut(s)	482, 935, 1078
BstNSI	RCATGY	1 cut(s)	1483
BstPI	GGTNACC	1 cut(s)	1205
BstSCI	CCNGG	5 cut(s)	480, 933, 1076, 1209, 1388
BstSFI	CTRYAG	1 cut(s)	573
BstUI	CGCG	1 cut(s)	190
BstV1I	GCAGC	3 cut(s)	183, 308, 1083
BstX2I	RGATCY	3 cut(s)	23, 1136, 1256
BstXI	CCANNNNNNTGG	1 cut(s)	941
BstYI	RGATCY	3 cut(s)	23, 1136, 1256
Bsu15I	ATCGAT	1 cut(s)	1307
BsuRI	GGCC	3 cut(s)	202, 933, 1214
BsuTUI	ATCGAT	1 cut(s)	1307
BtsCI	GGATG	5 cut(s)	649, 741, 1060, 1276, 1399
BtsI	GCAGTG	2 cut(s)	469, 1412
BtsIMutI	CAGTG	2 cut(s)	469, 1412
BveI	ACCTGC	1 cut(s)	413
Cac8I	GCNNGC	2 cut(s)	188, 1040
CaiI	CAGNNNCTG	1 cut(s)	1334
CciI	TCATGA	1 cut(s)	1141
CfoI	GCGC	3 cut(s)	192, 441, 1071
Cfr13I	GGNCC	2 cut(s)	201, 1212
ClaI	ATCGAT	1 cut(s)	1307
Csp6I	GTAC	3 cut(s)	387, 582, 950
CviAII	CATG	4 cut(s)	776, 956, 1142, 1480
CviQI	GTAC	3 cut(s)	387, 582, 950
DpnI	GATC	7 cut(s)	25, 291, 333, 394, 427, 1138, 1258
DpnII	GATC	7 cut(s)	23, 289, 331, 392, 425, 1136, 1256
DrdI	GACNNNNNNGTC	1 cut(s)	1568
DseDI	GACNNNNNNGTC	1 cut(s)	1568
Eam1104I	CTCTTC	1 cut(s)	525
EarI	CTCTTC	1 cut(s)	525
Eco24I	GRGCYC	2 cut(s)	63, 188
Eco31I	GGTCTC	2 cut(s)	385, 1318
Eco32I	GATATC	2 cut(s)	340, 1587
Eco57I	CTGAAG	2 cut(s)	506, 591
Eco72I	CACGTG	2 cut(s)	269, 863
Eco88I	CYCGRG	1 cut(s)	698
Eco91I	GGTNACC	1 cut(s)	1205
EcoO65I	GGTNACC	1 cut(s)	1205
EcoRI	GAATTC	2 cut(s)	742, 1221
EcoRII	CCWGG	3 cut(s)	480, 933, 1076
EcoRV	GATATC	2 cut(s)	340, 1587
EcoT22I	ATGCAT	1 cut(s)	1060
EcoT38I	GRGCYC	2 cut(s)	63, 188
Esp3I	CGTCTC	1 cut(s)	729
FaeI	CATG	4 cut(s)	779, 959, 1145, 1483
FaqI	GGGAC	1 cut(s)	681
FatI	CATG	4 cut(s)	775, 955, 1141, 1479
FauNDI	CATATG	1 cut(s)	1415
FblI	GTMKAC	1 cut(s)	178
Fnu4HI	GCNGC	3 cut(s)	172, 297, 1072
FokI	GGATG	5 cut(s)	656, 748, 1067, 1283, 1406
FriOI	GRGCYC	2 cut(s)	63, 188
Fsp4HI	GCNGC	3 cut(s)	172, 297, 1072
FspBI	CTAG	3 cut(s)	579, 1026, 1254
GlaI	GCGC	3 cut(s)	191, 440, 1070
GluI	GCNGC	3 cut(s)	172, 297, 1072
GsaI	CCCAGC	1 cut(s)	1331
GsuI	CTGGAG	2 cut(s)	367, 1060
HaeIII	GGCC	3 cut(s)	202, 933, 1214
HapII	CCGG	3 cut(s)	360, 1210, 1389
HhaI	GCGC	3 cut(s)	192, 441, 1071
Hin1II	CATG	4 cut(s)	779, 959, 1145, 1483
Hin6I	GCGC	3 cut(s)	190, 439, 1069
HinP1I	GCGC	3 cut(s)	190, 439, 1069
HincII	GTYRAC	5 cut(s)	179, 469, 961, 1375, 1492
HindII	GTYRAC	5 cut(s)	179, 469, 961, 1375, 1492
HinfI	GANTC	9 cut(s)	625, 772, 821, 857, 872, 906, 1083, 1091, 1199
HpaII	CCGG	3 cut(s)	360, 1210, 1389
HphI	GGTGA	8 cut(s)	109, 387, 394, 1086, 1181, 1199, 1271, 1549
Hpy166II	GTNNAC	7 cut(s)	179, 402, 469, 950, 961, 1375, 1492
Hpy188I	TCNGA	7 cut(s)	331, 436, 610, 690, 838, 1261, 1582
Hpy8I	GTNNAC	7 cut(s)	179, 402, 469, 950, 961, 1375, 1492
Hpy99I	CGWCG	2 cut(s)	1245, 1248
HpyAV	CCTTC	4 cut(s)	446, 903, 1023, 1430
HpyCH4III	ACNGT	4 cut(s)	399, 616, 1047, 1565
HpyCH4IV	ACGT	5 cut(s)	45, 268, 786, 862, 963
HpyCH4V	TGCA	5 cut(s)	320, 647, 799, 1010, 1058
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1530
HpySE526I	ACGT	5 cut(s)	45, 268, 786, 862, 963
Hsp92II	CATG	4 cut(s)	779, 959, 1145, 1483
HspAI	GCGC	3 cut(s)	190, 439, 1069
Kpn2I	TCCGGA	1 cut(s)	359
Kzo9I	GATC	7 cut(s)	23, 289, 331, 392, 425, 1136, 1256
LmnI	GCTCC	4 cut(s)	263, 1079, 1193, 1324
Lsp1109I	GCAGC	3 cut(s)	183, 308, 1083
LweI	GCATC	6 cut(s)	634, 726, 997, 1045, 1340, 1387
MaeI	CTAG	3 cut(s)	579, 1026, 1254
MaeII	ACGT	5 cut(s)	45, 268, 786, 862, 963
MaeIII	GTNAC	6 cut(s)	476, 542, 1205, 1293, 1361, 1409
MalI	GATC	7 cut(s)	25, 291, 333, 394, 427, 1138, 1258
MboI	GATC	7 cut(s)	23, 289, 331, 392, 425, 1136, 1256
MboII	GAAGA	8 cut(s)	299, 461, 512, 597, 950, 969, 1448, 1581
MflI	RGATCY	3 cut(s)	23, 1136, 1256
MhlI	GDGCHC	2 cut(s)	63, 188
MluCI	AATT	7 cut(s)	101, 420, 742, 840, 1221, 1275, 1446
MlyI	GAGTC	1 cut(s)	851
MmeI	TCCRAC	1 cut(s)	1005
Mph1103I	ATGCAT	1 cut(s)	1060
MroI	TCCGGA	1 cut(s)	359
MroXI	GAANNNNTTC	1 cut(s)	871
MseI	TTAA	3 cut(s)	54, 458, 1356
MspA1I	CMGCKG	2 cut(s)	89, 299
MspI	CCGG	3 cut(s)	360, 1210, 1389
MspR9I	CCNGG	5 cut(s)	482, 935, 1078, 1211, 1390
MvaI	CCWGG	3 cut(s)	482, 935, 1078
MvnI	CGCG	1 cut(s)	190
MwoI	GCNNNNNNNGC	1 cut(s)	1530
NciI	CCSGG	2 cut(s)	1211, 1390
NdeI	CATATG	1 cut(s)	1415
NdeII	GATC	7 cut(s)	23, 289, 331, 392, 425, 1136, 1256
NlaIII	CATG	4 cut(s)	779, 959, 1145, 1483
NlaIV	GGNNCC	5 cut(s)	25, 203, 259, 370, 1320
NmeAIII	GCCGAG	4 cut(s)	178, 611, 1295, 1559
NmuCI	GTSAC	3 cut(s)	1205, 1293, 1361
NsiI	ATGCAT	1 cut(s)	1060
NspI	RCATGY	1 cut(s)	1483
PagI	TCATGA	1 cut(s)	1141
PaqCI	CACCTGC	1 cut(s)	413
PciI	ACATGT	1 cut(s)	1479
PdmI	GAANNNNTTC	1 cut(s)	871
PfeI	GAWTC	8 cut(s)	625, 772, 821, 872, 906, 1083, 1091, 1199
PfoI	TCCNGGA	1 cut(s)	1076
PkrI	GCNGC	3 cut(s)	173, 298, 1073
PleI	GAGTC	1 cut(s)	851
PmaCI	CACGTG	2 cut(s)	269, 863
PmlI	CACGTG	2 cut(s)	269, 863
PpsI	GAGTC	1 cut(s)	851
Ppu21I	YACGTR	2 cut(s)	269, 863
PscI	ACATGT	1 cut(s)	1479
Psp6I	CCWGG	3 cut(s)	480, 933, 1076
PspCI	CACGTG	2 cut(s)	269, 863
PspEI	GGTNACC	1 cut(s)	1205
PspFI	CCCAGC	1 cut(s)	1327
PspGI	CCWGG	3 cut(s)	480, 933, 1076
PspN4I	GGNNCC	5 cut(s)	25, 203, 259, 370, 1320
PspPI	GGNCC	2 cut(s)	201, 1212
PstNI	CAGNNNCTG	1 cut(s)	1334
PsuI	RGATCY	3 cut(s)	23, 1136, 1256
PvuII	CAGCTG	2 cut(s)	89, 299
RsaI	GTAC	3 cut(s)	388, 583, 951
RsaNI	GTAC	3 cut(s)	387, 582, 950
SalI	GTCGAC	1 cut(s)	177
SaqAI	TTAA	3 cut(s)	54, 458, 1356
SatI	GCNGC	3 cut(s)	172, 297, 1072
Sau3AI	GATC	7 cut(s)	23, 289, 331, 392, 425, 1136, 1256
Sau96I	GGNCC	2 cut(s)	201, 1212
ScaI	AGTACT	2 cut(s)	388, 583
SchI	GAGTC	1 cut(s)	851
ScrFI	CCNGG	5 cut(s)	482, 935, 1078, 1211, 1390
SduI	GDGCHC	2 cut(s)	63, 188
SfaNI	GCATC	6 cut(s)	634, 726, 997, 1045, 1340, 1387
SfcI	CTRYAG	1 cut(s)	573
SmlI	CTYRAG	1 cut(s)	276
SmoI	CTYRAG	1 cut(s)	276
Sse9I	AATT	7 cut(s)	101, 420, 742, 840, 1221, 1275, 1446
SsiI	CCGC	5 cut(s)	219, 252, 264, 739, 1282
SspMI	CTAG	3 cut(s)	579, 1026, 1254
StyD4I	CCNGG	5 cut(s)	480, 933, 1076, 1209, 1388
TaaI	ACNGT	4 cut(s)	399, 616, 1047, 1565
TaiI	ACGT	5 cut(s)	48, 271, 789, 865, 966
TaqI	TCGA	4 cut(s)	167, 178, 1307, 1450
TasI	AATT	7 cut(s)	101, 420, 742, 840, 1221, 1275, 1446
TatI	WGTACW	3 cut(s)	386, 581, 949
TfiI	GAWTC	8 cut(s)	625, 772, 821, 872, 906, 1083, 1091, 1199
Tru1I	TTAA	3 cut(s)	54, 458, 1356
Tru9I	TTAA	3 cut(s)	54, 458, 1356
TscAI	CASTG	2 cut(s)	469, 1412
TseFI	GTSAC	3 cut(s)	1205, 1293, 1361
TseI	GCWGC	3 cut(s)	171, 296, 1071
Tsp45I	GTSAC	3 cut(s)	1205, 1293, 1361
TspDTI	ATGAA	5 cut(s)	103, 944, 1075, 1251, 1287
TspRI	CASTG	2 cut(s)	469, 1412
XapI	RAATTY	5 cut(s)	742, 840, 1221, 1275, 1446
XbaI	TCTAGA	1 cut(s)	1253
XceI	RCATGY	1 cut(s)	1483
XmiI	GTMKAC	1 cut(s)	178
XmnI	GAANNNNTTC	1 cut(s)	871
XspI	CTAG	3 cut(s)	579, 1026, 1254
ZrmI	AGTACT	2 cut(s)	388, 583
Zsp2I	ATGCAT	1 cut(s)	1060

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.