pycom15g14460

Large proline-rich protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0007815
Physical Location & Seq
Reverse (-)
9861743 .. 9868182
6440 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g14460.12

Sequence Viewer

Length: 2331 bp
ATGCCGGTAGCATTTTTTTGTAAAAGTTTTCCAAACAGTGTGTTTTCTGAACTGCAGATGCCAGTTCCTGCTTTGAAAGAACAAGTTGCTTCTGTCACTGGTGTGCTATCAGAACAACAACGACTGATATGCCGAGGAAAAGTTCTAAAGGATGATCAGCTTCTCTCTGCCTATCATGTTGAAGATGGTCACACCTTACATTTGGTTGTGAGACAGCCTATTCCACTATCAGCTGAAGGGTTACCAGATCATCCAGGAACTGATCCAGCTTCAAGTTCAAGCCGTCATGCTGGCCCTGGTGTTGTCATTGAAACTTTCAGCATGCCTGCTCAAGGGGATGGATTTGCACCTGAAATCAATCGGATAATCTCTGCTGTTCTCGGCTCTATAGGAATGCCAAATATTGCAGGTGGCAGTGAAGGGATCGAAGTCAGGGAACATGGGCCACAGAGGCCAGAAAGGACATCGAGTTTTGGTGGTATGTTTGATTTCTCCCAATTTCAATCTGAACAAACTGCCACAAGGGGTCCATCCGATAGATCAAATGGGACTTTTAGTCATTCAACATCATTTCCTTTGGGGGCCCTGCCACCTCTGGTAATTCCTGGTTCTTTGACCACTTTAACCCAATATCTGAGTCATATGAGGCGTGAATTTGAGGCTATTGACAGAGATGCGGGAAGCAATCAAGCAGCTGCTACTCATAGGACTGAAGAAAGCTCCAATTCCTCATCACGTTCAGGGATAAGGCAAGAGGGGCTCTCCACTCCTGCATCATTGGCAGAGATCATGCGTTCTACTCGACAGTTACTCGCTGAACAAGTTGGAGAATCCTTACTTCAATTTGCAAGTCAACTGGAGAATCAAGTGAATGTGACTGATTCTGCAGAACGGTTGAGCGCCCAAGCTAGTGCATCGAGAACTGGAGCTTTATTTCATAACCTAGGTGCCTTTTTACTTGAACTTGGTCGTACAACCATGACGTTGCAAATGGGTCAAGCACCGTCTGATGCGGTGGTTAGTGCTGGACCTGCAGTTTTCATATCCCCTACTGGCCCTAATCCGATTATGGTTCAGCCTCTTCCTTTCCAATCTGGAACGAACTTTGGTGCCATCCCCATGGGAGCCGTGCAGCCTGGTTCTGGTCTTGTTAGTGGACTTGGTACTGGTTTTCATCCAAGGCGTTCGTCGGCAACTGCACCCGATGCCACTCGAGATGAACAAGGGGAGACTCAGCAGCCTTCAGGGCAAAGAAACCCAGTAACAAGTTCTGGCAGTGAAAATCCTACTAATCAAGCCACTTCAAGGTTCTCAGGTGGTTCAGCTTTTGCTGGAGATCCAGCTGTAAGGATAATGCCAATCAGGACCATGGTTGCAGCAGTCCCTGCTTCCCTCAGTCGCCAACCATCAGATTCTTCTGGTATTTCGGGAGGGTTATACTATCCACTGCTTGGAAGGTTTCAACATGTAGCTTCTGGGAATGTGAATAGTGAACAAGGAACTCCAGCATCCAGAGATCGTCACCCTGCCAATCTCCATACTGATCCTCAGTCTTCTGAATCTGCAGCAGAACGGCAAAATGCTGCAGATCCTGCAAGAGATGGATCAGCTCCCAATGTAAGACGACCATCAATCGCACGAAGTGTCAGTATCAATATTTTATCAGCTGGCGGAACCCCAAACAGCCAAGAATCTGAGAGACAGGTCCCAGGTAGTATATTACAGTTTATAAGGACCCTCTTTCCGAGTGGTGAAATTCATGTAGAAGACGGCAGTGCCGAGGGAGCGACTGCAGGTTCTGTACCAGATCAGCCAAGGCCATCTAGTGGTGGTGTGGCTGCACCGGAAGCAGAACCAAGGGCCACGGATGAAGGAATATTTTTGTCTAATTTGCTTCATGAAATCATGCCATTCATATCTCAAGCCACAGGGGGAGAGCCAGGAAATTCTTCTGAGCACAGAATGGCCCAAGATTCTCCCACCAGGGCTGAGACCTCCGATGTTGGGTCATCCCGTCAGCGGAGTGATTCTGAAGAATCTGAACCAAATCTTCCTACTTCAAAACGCCAAAAGACTGAGAAGGCGTTTCTGAAGCAGCCCAAAGTGTTCATCAGCTCTAAGAAATCTGGGAAGGGGAAGAGACCCGGAAAGGGCGGTAACCGGTTCTGGAAGAGCGTTGGGCTCGGTTTCAAGACCCCCAGGGATGCCATTGAAGGGACTTACATTGATAAGAAATGCCCGCCATTGTCCAAGACTAAGAGGTTCAACGTCTTGAAGGTGACACCTGCCGGATCTTCCGGCACTGGCAAGAAGGCTTTTGCTGGAATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000280 GO:0001655 GO:0001775 GO:0001822 GO:0002020 GO:0002253 GO:0002376 GO:0002429 GO:0002474 GO:0002682 GO:0002684 GO:0002757 GO:0002764 GO:0002768 GO:0003674 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006464 GO:0006473 GO:0006475 GO:0006508 GO:0006511 GO:0006515 GO:0006807 GO:0006915 GO:0006950 GO:0006974 GO:0006996 GO:0007029 GO:0007049 GO:0007059 GO:0007127 GO:0007129 GO:0007130 GO:0007154 GO:0007165 GO:0007166 GO:0007275 GO:0007276 GO:0007283 GO:0007399 GO:0007417 GO:0007420 GO:0008104 GO:0008150 GO:0008152 GO:0008219 GO:0008630 GO:0009056 GO:0009057 GO:0009892 GO:0009893 GO:0009894 GO:0009895 GO:0009896 GO:0009987 GO:0010033 GO:0010243 GO:0010256 GO:0010498 GO:0010604 GO:0010605 GO:0010941 GO:0012501 GO:0016020 GO:0016043 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019222 GO:0019538 GO:0019882 GO:0019899 GO:0019941 GO:0019953 GO:0022402 GO:0022414 GO:0022607 GO:0023052 GO:0030101 GO:0030162 GO:0030163 GO:0030323 GO:0030324 GO:0030433 GO:0030544 GO:0031072 GO:0031323 GO:0031324 GO:0031325 GO:0031329 GO:0031330 GO:0031331 GO:0031593 GO:0031625 GO:0031647 GO:0031974 GO:0031981 GO:0031982 GO:0032268 GO:0032269 GO:0032270 GO:0032434 GO:0032435 GO:0032501 GO:0032502 GO:0032504 GO:0032991 GO:0033036 GO:0033365 GO:0033554 GO:0034613 GO:0034976 GO:0035295 GO:0035556 GO:0035966 GO:0035967 GO:0036211 GO:0036503 GO:0036506 GO:0042176 GO:0042177 GO:0042221 GO:0042771 GO:0042802 GO:0042981 GO:0043021 GO:0043022 GO:0043066 GO:0043067 GO:0043069 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043230 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043632 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044421 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0044703 GO:0044877 GO:0045048 GO:0045132 GO:0045143 GO:0045184 GO:0045321 GO:0045732 GO:0045861 GO:0045862 GO:0045995 GO:0046649 GO:0048002 GO:0048232 GO:0048285 GO:0048513 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048609 GO:0048731 GO:0048856 GO:0050776 GO:0050778 GO:0050789 GO:0050793 GO:0050794 GO:0050821 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051205 GO:0051234 GO:0051239 GO:0051246 GO:0051247 GO:0051248 GO:0051276 GO:0051321 GO:0051603 GO:0051641 GO:0051704 GO:0051716 GO:0051787 GO:0051788 GO:0060255 GO:0060322 GO:0060541 GO:0060548 GO:0061024 GO:0061136 GO:0061857 GO:0061982 GO:0065007 GO:0065008 GO:0070013 GO:0070059 GO:0070062 GO:0070192 GO:0070193 GO:0070628 GO:0070727 GO:0070887 GO:0071218 GO:0071310 GO:0071704 GO:0071712 GO:0071816 GO:0071818 GO:0071840 GO:0072001 GO:0072331 GO:0072332 GO:0072379 GO:0072657 GO:0080090 GO:0080134 GO:0080135 GO:0090150 GO:0097190 GO:0097193 GO:0098813 GO:0140013 GO:0140030 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1901799 GO:1901800 GO:1903046 GO:1903050 GO:1903051 GO:1903052 GO:1903362 GO:1903363 GO:1903364 GO:1903561 GO:1904292 GO:1904294 GO:1904378 GO:1905897 GO:1905898 GO:1990381 GO:2000026 GO:2000058 GO:2000059
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ubiquitin

Protein Analysis

777

Amino Acids

81.75

Weight (kDa)

7.02

Isoelectric Point (pI)

55.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1730
AarI CACCTGC 2 cut(s) 398, 2293
Acc36I ACCTGC 4 cut(s) 398, 1039, 1784, 2293
AccB1I GGYRCC 2 cut(s) 947, 1109
AccB7I CCANNNNNTGG 2 cut(s) 1451, 1826
AciI CCGC 6 cut(s) 677, 1013, 1671, 2020, 2154, 2240
AclWI GGATC 7 cut(s) 257, 431, 1331, 1538, 1583, 1612, 2299
AcsI RAATTY 4 cut(s) 653, 1755, 1945, 2325
AcuI CTGAAG 5 cut(s) 255, 732, 1227, 2052, 2111
AdeI CACNNNGTG 1 cut(s) 1643
AfaI GTAC 3 cut(s) 973, 1165, 1803
AfiI CCNNNNNNNGG 9 cut(s) 332, 1142, 1305, 1451, 1826, 2004, 2019, 2150, 2214
AflIII ACRYGT 1 cut(s) 1465
AgeI ACCGGT 1 cut(s) 2160
AhdI GACNNNNNGTC 1 cut(s) 555
AjnI CCWGG 8 cut(s) 253, 295, 604, 1135, 1708, 1939, 1982, 2198
AleI CACNNNNGTG 1 cut(s) 101
Alw21I GWGCWC 1 cut(s) 1959
Alw26I GTCTC 5 cut(s) 205, 1223, 1693, 1985, 2134
AlwI GGATC 7 cut(s) 257, 431, 1331, 1538, 1583, 1612, 2299
AlwNI CAGNNNCTG 5 cut(s) 68, 260, 1385, 1592, 1799
Ama87I CYCGRG 1 cut(s) 1212
AoxI GGCC 8 cut(s) 292, 443, 452, 582, 1054, 1817, 1860, 1965
ApaI GGGCCC 1 cut(s) 586
ApeKI GCWGC 9 cut(s) 692, 695, 1132, 1237, 1376, 1565, 1583, 1838, 2095
ApoI RAATTY 4 cut(s) 653, 1755, 1945, 2325
AsiGI ACCGGT 1 cut(s) 2160
Asp700I GAANNNNTTC 1 cut(s) 1948
AspA2I CCTAGG 1 cut(s) 943
AspLEI GCGC 1 cut(s) 902
AsuC2I CCSGG 1 cut(s) 2145
AsuHPI GGTGA 3 cut(s) 1514, 1763, 2290
AvaI CYCGRG 1 cut(s) 1212
AvaII GGWCC 5 cut(s) 527, 1028, 1365, 1705, 1734
AvrII CCTAGG 1 cut(s) 943
BaeGI GKGCMC 1 cut(s) 586
BanI GGYRCC 2 cut(s) 947, 1109
BanII GRGCYC 3 cut(s) 586, 762, 2184
BbsI GAAGAC 2 cut(s) 1545, 1773
Bbv12I GWGCWC 1 cut(s) 1959
BbvI GCAGC 9 cut(s) 682, 704, 1144, 1249, 1388, 1570, 1577, 1825, 2107
BccI CCATC 8 cut(s) 179, 332, 538, 1121, 1414, 1595, 1636, 1828
BceAI ACGGC 4 cut(s) 267, 1112, 1589, 1786
BcgI CGANNNNNNTGC 2 cut(s) 111, 145
BciT130I CCWGG 8 cut(s) 255, 297, 606, 1137, 1710, 1941, 1984, 2200
BclI TGATCA 1 cut(s) 154
BcnI CCSGG 1 cut(s) 2145
BcoDI GTCTC 5 cut(s) 205, 1223, 1693, 1985, 2134
BfaI CTAG 3 cut(s) 909, 944, 1824
BfmI CTRYAG 7 cut(s) 53, 387, 885, 1032, 1563, 1584, 1791
BfoI RGCGCY 1 cut(s) 903
BfuAI ACCTGC 4 cut(s) 398, 1039, 1784, 2293
BglI GCCNNNNNGGC 2 cut(s) 451, 1246
BisI GCNGC 9 cut(s) 693, 696, 1133, 1238, 1377, 1566, 1584, 1839, 2096
BlnI CCTAGG 1 cut(s) 943
BlsI GCNGC 9 cut(s) 694, 697, 1134, 1239, 1378, 1567, 1585, 1840, 2097
Bme1390I CCNGG 9 cut(s) 255, 297, 606, 1137, 1710, 1941, 1984, 2145, 2200
Bme18I GGWCC 5 cut(s) 527, 1028, 1365, 1705, 1734
BmeRI GACNNNNNGTC 1 cut(s) 555
BmeT110I CYCGRG 1 cut(s) 1212
BmiI GGNNCC 9 cut(s) 528, 583, 584, 949, 1111, 1126, 1675, 1707, 1736
BmrFI CCNGG 9 cut(s) 255, 297, 606, 1137, 1710, 1941, 1984, 2145, 2200
BmrI ACTGGG 1 cut(s) 1253
BmsI GCATC 8 cut(s) 48, 664, 782, 923, 1000, 1195, 1517, 2194
BmuI ACTGGG 1 cut(s) 1253
BpiI GAAGAC 2 cut(s) 1545, 1773
BplI GAGNNNNNCTC 2 cut(s) 746, 778
BpmI CTGGAG 4 cut(s) 878, 945, 1353, 1488
BpuEI CTTGAG 2 cut(s) 315, 1905
BpuMI CCSGG 1 cut(s) 2145
BsaI GGTCTC 2 cut(s) 1985, 2134
BsaWI WCCGGW 2 cut(s) 1843, 2160
Bsc4I CCNNNNNNNGG 9 cut(s) 332, 1142, 1305, 1451, 1826, 2004, 2019, 2150, 2214
Bse118I RCCGGY 2 cut(s) 4, 2160
Bse1I ACTGG 8 cut(s) 62, 103, 861, 928, 1057, 1171, 1259, 2308
BseBI CCWGG 8 cut(s) 255, 297, 606, 1137, 1710, 1941, 1984, 2200
BseLI CCNNNNNNNGG 9 cut(s) 332, 1142, 1305, 1451, 1826, 2004, 2019, 2150, 2214
BseMII CTCAG 9 cut(s) 626, 1247, 1326, 1408, 1562, 1686, 1944, 1980, 2067
BseNI ACTGG 8 cut(s) 62, 103, 861, 928, 1057, 1171, 1259, 2308
BseSI GKGCMC 1 cut(s) 586
BseXI GCAGC 9 cut(s) 682, 704, 1144, 1249, 1388, 1570, 1577, 1825, 2107
BsgI GTGCAG 3 cut(s) 1151, 1182, 1824
BshFI GGCC 8 cut(s) 294, 445, 454, 584, 1056, 1819, 1862, 1967
BshNI GGYRCC 2 cut(s) 947, 1109
BshTI ACCGGT 1 cut(s) 2160
BsiHKAI GWGCWC 1 cut(s) 1959
BsiHKCI CYCGRG 1 cut(s) 1212
BsiSI CCGG 6 cut(s) 5, 1844, 2145, 2161, 2289, 2298
BslFI GGGAC 4 cut(s) 562, 1367, 1691, 2230
BslI CCNNNNNNNGG 9 cut(s) 332, 1142, 1305, 1451, 1826, 2004, 2019, 2150, 2214
BsmAI GTCTC 5 cut(s) 205, 1223, 1693, 1985, 2134
BsmFI GGGAC 4 cut(s) 562, 1367, 1691, 2230
BsmI GAATGC 1 cut(s) 399
BsnI GGCC 8 cut(s) 294, 445, 454, 584, 1056, 1819, 1862, 1967
Bso31I GGTCTC 2 cut(s) 1985, 2134
BsoBI CYCGRG 1 cut(s) 1212
Bsp120I GGGCCC 1 cut(s) 582
Bsp1286I GDGCHC 4 cut(s) 586, 762, 1959, 2184
Bsp19I CCATGG 2 cut(s) 1119, 1368
BspACI CCGC 6 cut(s) 677, 1013, 1671, 2020, 2154, 2240
BspANI GGCC 8 cut(s) 294, 445, 454, 584, 1056, 1819, 1862, 1967
BspCNI CTCAG 9 cut(s) 627, 1246, 1325, 1407, 1561, 1687, 1945, 1981, 2068
BspHI TCATGA 1 cut(s) 1897
BspLI GGNNCC 9 cut(s) 528, 583, 584, 949, 1111, 1126, 1675, 1707, 1736
BspMAI CTGCAG 6 cut(s) 57, 889, 1036, 1567, 1588, 1795
BspMI ACCTGC 4 cut(s) 398, 1039, 1784, 2293
BspPI GGATC 7 cut(s) 257, 431, 1331, 1538, 1583, 1612, 2299
BspQI GCTCTTC 1 cut(s) 2165
BspT107I GGYRCC 2 cut(s) 947, 1109
BspTNI GGTCTC 2 cut(s) 1985, 2134
BsrFI RCCGGY 2 cut(s) 4, 2160
BsrI ACTGG 8 cut(s) 62, 103, 861, 928, 1057, 1171, 1259, 2308
BssAI RCCGGY 2 cut(s) 4, 2160
BssT1I CCWWGG 6 cut(s) 943, 1119, 1178, 1368, 1814, 1856
Bst2UI CCWGG 8 cut(s) 255, 297, 606, 1137, 1710, 1941, 1984, 2200
Bst4CI ACNGT 5 cut(s) 38, 807, 894, 1005, 1725
Bst6I CTCTTC 3 cut(s) 1086, 2132, 2165
BstAPI GCANNNNNTGC 3 cut(s) 1205, 1385, 1592
BstC8I GCNNGC 5 cut(s) 292, 323, 327, 1669, 2240
BstDSI CCRYGG 3 cut(s) 1119, 1368, 1863
BstEII GGTNACC 2 cut(s) 240, 2156
BstENI CCTNNNNNAGG 1 cut(s) 330
BstH2I RGCGCY 1 cut(s) 903
BstHHI GCGC 1 cut(s) 902
BstMAI GTCTC 5 cut(s) 205, 1223, 1693, 1985, 2134
BstNI CCWGG 8 cut(s) 255, 297, 606, 1137, 1710, 1941, 1984, 2200
BstNSI RCATGY 2 cut(s) 325, 1469
BstPI GGTNACC 2 cut(s) 240, 2156
BstSCI CCNGG 9 cut(s) 253, 295, 604, 1135, 1708, 1939, 1982, 2143, 2198
BstSFI CTRYAG 7 cut(s) 53, 387, 885, 1032, 1563, 1584, 1791
BstSLI GKGCMC 1 cut(s) 586
BstV1I GCAGC 9 cut(s) 682, 704, 1144, 1249, 1388, 1570, 1577, 1825, 2107
BstV2I GAAGAC 2 cut(s) 1545, 1773
BstX2I RGATCY 3 cut(s) 1336, 1588, 2291
BstXI CCANNNNNNTGG 1 cut(s) 1120
BstYI RGATCY 3 cut(s) 1336, 1588, 2291
BsuRI GGCC 8 cut(s) 294, 445, 454, 584, 1056, 1819, 1862, 1967
BtgI CCRYGG 3 cut(s) 1119, 1368, 1863
BtsI GCAGTG 4 cut(s) 421, 1282, 1445, 1780
BtsIMutI CAGTG 7 cut(s) 43, 96, 421, 1282, 1445, 1780, 2301
BveI ACCTGC 4 cut(s) 398, 1039, 1784, 2293
Cac8I GCNNGC 5 cut(s) 292, 323, 327, 1669, 2240
CaiI CAGNNNCTG 5 cut(s) 68, 260, 1385, 1592, 1799
CciI TCATGA 1 cut(s) 1897
CfoI GCGC 1 cut(s) 902
Cfr10I RCCGGY 2 cut(s) 4, 2160
Csp6I GTAC 3 cut(s) 972, 1164, 1802
CspAI ACCGGT 1 cut(s) 2160
CviQI GTAC 3 cut(s) 972, 1164, 1802
DraIII CACNNNGTG 1 cut(s) 1643
DriI GACNNNNNGTC 1 cut(s) 555
Eam1104I CTCTTC 3 cut(s) 1086, 2132, 2165
Eam1105I GACNNNNNGTC 1 cut(s) 555
EarI CTCTTC 3 cut(s) 1086, 2132, 2165
EciI GGCGGA 1 cut(s) 1686
Eco130I CCWWGG 6 cut(s) 943, 1119, 1178, 1368, 1814, 1856
Eco24I GRGCYC 3 cut(s) 586, 762, 2184
Eco31I GGTCTC 2 cut(s) 1985, 2134
Eco47I GGWCC 5 cut(s) 527, 1028, 1365, 1705, 1734
Eco57I CTGAAG 5 cut(s) 255, 732, 1227, 2052, 2111
Eco88I CYCGRG 1 cut(s) 1212
Eco91I GGTNACC 2 cut(s) 240, 2156
EcoNI CCTNNNNNAGG 1 cut(s) 330
EcoO109I RGGNCCY 4 cut(s) 582, 583, 1705, 1734
EcoO65I GGTNACC 2 cut(s) 240, 2156
EcoRII CCWGG 8 cut(s) 253, 295, 604, 1135, 1708, 1939, 1982, 2198
EcoT14I CCWWGG 6 cut(s) 943, 1119, 1178, 1368, 1814, 1856
EcoT38I GRGCYC 3 cut(s) 586, 762, 2184
ErhI CCWWGG 6 cut(s) 943, 1119, 1178, 1368, 1814, 1856
FaqI GGGAC 4 cut(s) 562, 1367, 1691, 2230
FauI CCCGC 2 cut(s) 670, 2247
FauNDI CATATG 1 cut(s) 642
FbaI TGATCA 1 cut(s) 154
Fnu4HI GCNGC 9 cut(s) 693, 696, 1133, 1238, 1377, 1566, 1584, 1839, 2096
FriOI GRGCYC 3 cut(s) 586, 762, 2184
Fsp4HI GCNGC 9 cut(s) 693, 696, 1133, 1238, 1377, 1566, 1584, 1839, 2096
FspBI CTAG 3 cut(s) 909, 944, 1824
GlaI GCGC 1 cut(s) 901
GluI GCNGC 9 cut(s) 693, 696, 1133, 1238, 1377, 1566, 1584, 1839, 2096
GsuI CTGGAG 4 cut(s) 878, 945, 1353, 1488
HaeII RGCGCY 1 cut(s) 903
HaeIII GGCC 8 cut(s) 294, 445, 454, 584, 1056, 1819, 1862, 1967
HapII CCGG 6 cut(s) 5, 1844, 2145, 2161, 2289, 2298
HhaI GCGC 1 cut(s) 902
Hin6I GCGC 1 cut(s) 900
HinP1I GCGC 1 cut(s) 900
HincII GTYRAC 1 cut(s) 854
HindII GTYRAC 1 cut(s) 854
HpaII CCGG 6 cut(s) 5, 1844, 2145, 2161, 2289, 2298
HphI GGTGA 3 cut(s) 1514, 1763, 2290
Hpy166II GTNNAC 3 cut(s) 854, 1157, 1493
Hpy8I GTNNAC 3 cut(s) 854, 1157, 1493
Hpy99I CGWCG 1 cut(s) 1192
HpyCH4III ACNGT 5 cut(s) 38, 807, 894, 1005, 1725
HpyCH4IV ACGT 3 cut(s) 736, 983, 2268
HpySE526I ACGT 3 cut(s) 736, 983, 2268
HspAI GCGC 1 cut(s) 900
Ksp22I TGATCA 1 cut(s) 154
LguI GCTCTTC 1 cut(s) 2165
LmnI GCTCC 5 cut(s) 725, 926, 1124, 1615, 1784
Lsp1109I GCAGC 9 cut(s) 682, 704, 1144, 1249, 1388, 1570, 1577, 1825, 2107
LweI GCATC 8 cut(s) 48, 664, 782, 923, 1000, 1195, 1517, 2194
MaeI CTAG 3 cut(s) 909, 944, 1824
MaeII ACGT 3 cut(s) 736, 983, 2268
MaeIII GTNAC 9 cut(s) 94, 188, 240, 807, 874, 1261, 1520, 2156, 2278
MflI RGATCY 3 cut(s) 1336, 1588, 2291
MhlI GDGCHC 4 cut(s) 586, 762, 1959, 2184
MluCI AATT 9 cut(s) 497, 600, 653, 724, 842, 1755, 1888, 1945, 2325
MlyI GAGTC 2 cut(s) 646, 1225
MmeI TCCRAC 1 cut(s) 805
MroXI GAANNNNTTC 1 cut(s) 1948
MseI TTAA 1 cut(s) 623
MslI CAYNNNNRTG 2 cut(s) 101, 1118
MspA1I CMGCKG 5 cut(s) 233, 695, 1343, 1667, 2020
MspI CCGG 6 cut(s) 5, 1844, 2145, 2161, 2289, 2298
MspR9I CCNGG 9 cut(s) 255, 297, 606, 1137, 1710, 1941, 1984, 2145, 2200
Mva1269I GAATGC 1 cut(s) 399
MvaI CCWGG 8 cut(s) 255, 297, 606, 1137, 1710, 1941, 1984, 2200
NciI CCSGG 1 cut(s) 2145
NcoI CCATGG 2 cut(s) 1119, 1368
NdeI CATATG 1 cut(s) 642
NlaIV GGNNCC 9 cut(s) 528, 583, 584, 949, 1111, 1126, 1675, 1707, 1736
NmeAIII GCCGAG 3 cut(s) 158, 360, 1804
NmuCI GTSAC 5 cut(s) 94, 188, 874, 1520, 2278
NspI RCATGY 2 cut(s) 325, 1469
OliI CACNNNNGTG 1 cut(s) 101
PaeI GCATGC 1 cut(s) 325
PaeR7I CTCGAG 1 cut(s) 1212
PagI TCATGA 1 cut(s) 1897
PaqCI CACCTGC 2 cut(s) 398, 2293
PasI CCCWGGG 1 cut(s) 2199
PciI ACATGT 1 cut(s) 1465
PciSI GCTCTTC 1 cut(s) 2165
PcsI WCGNNNNNNNCGW 1 cut(s) 1776
PctI GAATGC 1 cut(s) 399
PdmI GAANNNNTTC 1 cut(s) 1948
PfeI GAWTC 9 cut(s) 830, 862, 881, 1412, 1559, 1691, 1973, 2027, 2036
PflMI CCANNNNNTGG 2 cut(s) 1451, 1826
PfoI TCCNGGA 1 cut(s) 253
PinAI ACCGGT 1 cut(s) 2160
PkrI GCNGC 9 cut(s) 694, 697, 1134, 1239, 1378, 1567, 1585, 1840, 2097
PleI GAGTC 2 cut(s) 645, 1225
PpsI GAGTC 2 cut(s) 645, 1225
PpuMI RGGWCCY 2 cut(s) 1705, 1734
PscI ACATGT 1 cut(s) 1465
PsiI TTATAA 1 cut(s) 1730
Psp5II RGGWCCY 2 cut(s) 1705, 1734
Psp6I CCWGG 8 cut(s) 253, 295, 604, 1135, 1708, 1939, 1982, 2198
PspEI GGTNACC 2 cut(s) 240, 2156
PspGI CCWGG 8 cut(s) 253, 295, 604, 1135, 1708, 1939, 1982, 2198
PspN4I GGNNCC 9 cut(s) 528, 583, 584, 949, 1111, 1126, 1675, 1707, 1736
PspOMI GGGCCC 1 cut(s) 582
PspPPI RGGWCCY 2 cut(s) 1705, 1734
PstI CTGCAG 6 cut(s) 57, 889, 1036, 1567, 1588, 1795
PstNI CAGNNNCTG 5 cut(s) 68, 260, 1385, 1592, 1799
PsuI RGATCY 3 cut(s) 1336, 1588, 2291
PvuII CAGCTG 4 cut(s) 233, 695, 1343, 1667
RsaI GTAC 3 cut(s) 973, 1165, 1803
RsaNI GTAC 3 cut(s) 972, 1164, 1802
RseI CAYNNNNRTG 2 cut(s) 101, 1118
SapI GCTCTTC 1 cut(s) 2165
SaqAI TTAA 1 cut(s) 623
SatI GCNGC 9 cut(s) 693, 696, 1133, 1238, 1377, 1566, 1584, 1839, 2096
SchI GAGTC 2 cut(s) 646, 1225
ScrFI CCNGG 9 cut(s) 255, 297, 606, 1137, 1710, 1941, 1984, 2145, 2200
SduI GDGCHC 4 cut(s) 586, 762, 1959, 2184
SfaNI GCATC 8 cut(s) 48, 664, 782, 923, 1000, 1195, 1517, 2194
SfcI CTRYAG 7 cut(s) 53, 387, 885, 1032, 1563, 1584, 1791
SfiI GGCCNNNNNGGCC 1 cut(s) 451
Sfr274I CTCGAG 1 cut(s) 1212
SinI GGWCC 5 cut(s) 527, 1028, 1365, 1705, 1734
SlaI CTCGAG 1 cut(s) 1212
SmiMI CAYNNNNRTG 2 cut(s) 101, 1118
SmlI CTYRAG 3 cut(s) 330, 1212, 1920
SmoI CTYRAG 3 cut(s) 330, 1212, 1920
SphI GCATGC 1 cut(s) 325
Sse9I AATT 9 cut(s) 497, 600, 653, 724, 842, 1755, 1888, 1945, 2325
SsiI CCGC 6 cut(s) 677, 1013, 1671, 2020, 2154, 2240
SspI AATATT 3 cut(s) 403, 1657, 1878
SspMI CTAG 3 cut(s) 909, 944, 1824
StyD4I CCNGG 9 cut(s) 253, 295, 604, 1135, 1708, 1939, 1982, 2143, 2198
StyI CCWWGG 6 cut(s) 943, 1119, 1178, 1368, 1814, 1856
TaaI ACNGT 5 cut(s) 38, 807, 894, 1005, 1725
TaiI ACGT 3 cut(s) 739, 986, 2271
TaqI TCGA 5 cut(s) 426, 467, 802, 917, 1213
TasI AATT 9 cut(s) 497, 600, 653, 724, 842, 1755, 1888, 1945, 2325
TfiI GAWTC 9 cut(s) 830, 862, 881, 1412, 1559, 1691, 1973, 2027, 2036
Tru1I TTAA 1 cut(s) 623
Tru9I TTAA 1 cut(s) 623
TscAI CASTG 7 cut(s) 43, 103, 421, 1282, 1452, 1780, 2308
TseFI GTSAC 5 cut(s) 94, 188, 874, 1520, 2278
TseI GCWGC 9 cut(s) 692, 695, 1132, 1237, 1376, 1565, 1583, 1838, 2095
Tsp45I GTSAC 5 cut(s) 94, 188, 874, 1520, 2278
TspGWI ACGGA 1 cut(s) 1880
TspRI CASTG 7 cut(s) 43, 103, 421, 1282, 1452, 1780, 2308
Van91I CCANNNNNTGG 2 cut(s) 1451, 1826
VpaK11BI GGWCC 5 cut(s) 527, 1028, 1365, 1705, 1734
XagI CCTNNNNNAGG 1 cut(s) 330
XapI RAATTY 4 cut(s) 653, 1755, 1945, 2325
XceI RCATGY 2 cut(s) 325, 1469
XhoI CTCGAG 1 cut(s) 1212
XmaJI CCTAGG 1 cut(s) 943
XmnI GAANNNNTTC 1 cut(s) 1948
XspI CTAG 3 cut(s) 909, 944, 1824
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.