Rmu_sc0033277.1_g000001

Large proline-rich protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0033277.1
OG0007815
Physical Location & Seq
Reverse (-)
457 .. 5572
5116 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0033277.1_g000001.1.cds

Sequence Viewer

Length: 2160 bp
atgggaagtaatggtgctgaacatattccaatgagtgagcagatggatgggtgtgaacccacgattgagataaaaataaagacattggattcacaaacctatactctcaaagtggataaagagatgccagttcctgctttgaaagaacagattgcctctgttactggtgtgctatcagagcaacagcggctaatatgcagaggaaaagttcttaaggatgatcagcttctctctgcctatcgtatcctattctatgttgaggatggccacaccttacatttggttgtcagacaacctattccaccttcatccgagggactgctgaatcattcagcaactgatcctgcttctagtacaagccgtggtcgatcgagtgtcttcattgaaagtttcagtgtgcctgttcagggggatggagttccaccagattttagtcggttcctctctgctgttctcggctctgtaggaatcccaagtattgcgagtggcagtgaaggcgttgacgtcacggatcctgggacacagaggccagaaaggacatcaggtttgagcggtttgtttgatttatcccaacttctatcggagcaagctaccacaagggctcaatctgatggatcaaatggcacttttggtcactcaccaccattttctttggggaatctgccacctctggtgattcctgattcgttgaatactttatctcgatatctgagtcatataaggcacgactttctggccattgtcagagatggaggacgcagtcaagaagctattcataggaatgacgaaagttccaattcctcgtcaggtcccggaataagacgagaggggatcccttcacctgcatcattggcagaagtcatccgtactgctcgactattactcattgaacaagctggagaatctctacttcgacttgcaagccagttggagaatcaagcgaatgtgacggatccctcggcacggatgagaacccaagccagtgcattgagaactggacatttgtatcataatttaggtgcctgtttacttgaacttggccgtactatgatgacattgcaaatgggccaaacgccgtctgatgctgtggttaatgctggacctgcagttttcatatccccgactggtcctaaccctataatggttcagcctcttccttttcaatcaggattgagtttaggtgccatccccatgggagctctacagcctggttctggtctacttaatggacttggttctggttttcatccaaggcgtattgatatacagatacgaagaggttcaccaacgaccactgccaatgtcaatcgagaggagcatcgtgatcttcagcaaccttcacaaagaaactcagcaccaagttcaggtggtgaaaatcctgccaatcaaacaccgccaagtgtctcagatggttcagctttcgctggagattcgggtgtgagggtagtgccagtcaggaccgtagttgccagtcgcctaccatctgagtctgctggtagttcgattgggttatactatccattcctcggaaggcttcaacatgtagcttctggaaatgtgaacggtgagcgaggatctcaagcatctggtgatcatcatcctgccggccttaacactgatcggcagtcttctgaaaacattacagatcctgcaagagacggatcaactcccaatataaggcaaccagatccccccactggacgaagtgttagtatcagttttttatcatctagtgggacccaaaacgatcaagaatctgagaggcaggtcccaagtggtattttaaatttacttagggctctctttcctggtggtgaaattcacgtagaagatggcagtgtacaaggaatgaattctagttctgtatcagatcaggcaaggacttctaatggtgtcgctgttgctccagaagctgaaccaagggttagcgaagaaggcatatttttgtctaatttacttcatcaagtaatgccattgatatctcaagcagcaactagagagccaggtcttgtacctgcagaagcggaaaactcttctgagcacacaatggcccaagactcttccaccgtggcggaaaacgccaatgttgggacatcgcgtcgacatagtcagagtgattgtgatgagcctcctagttcaaaacgtcaaaagaaggagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000280 GO:0001655 GO:0001775 GO:0001822 GO:0002020 GO:0002253 GO:0002376 GO:0002429 GO:0002474 GO:0002682 GO:0002684 GO:0002757 GO:0002764 GO:0002768 GO:0003674 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006464 GO:0006473 GO:0006475 GO:0006508 GO:0006511 GO:0006515 GO:0006807 GO:0006915 GO:0006950 GO:0006974 GO:0006996 GO:0007029 GO:0007049 GO:0007059 GO:0007127 GO:0007129 GO:0007130 GO:0007154 GO:0007165 GO:0007166 GO:0007275 GO:0007276 GO:0007283 GO:0007399 GO:0007417 GO:0007420 GO:0008104 GO:0008150 GO:0008152 GO:0008219 GO:0008630 GO:0009056 GO:0009057 GO:0009892 GO:0009893 GO:0009894 GO:0009895 GO:0009896 GO:0009987 GO:0010033 GO:0010243 GO:0010256 GO:0010498 GO:0010604 GO:0010605 GO:0010941 GO:0012501 GO:0016020 GO:0016043 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019222 GO:0019538 GO:0019882 GO:0019899 GO:0019941 GO:0019953 GO:0022402 GO:0022414 GO:0022607 GO:0023052 GO:0030101 GO:0030162 GO:0030163 GO:0030323 GO:0030324 GO:0030433 GO:0030544 GO:0031072 GO:0031323 GO:0031324 GO:0031325 GO:0031329 GO:0031330 GO:0031331 GO:0031593 GO:0031625 GO:0031647 GO:0031974 GO:0031981 GO:0031982 GO:0032268 GO:0032269 GO:0032270 GO:0032434 GO:0032435 GO:0032501 GO:0032502 GO:0032504 GO:0032991 GO:0033036 GO:0033365 GO:0033554 GO:0034613 GO:0034976 GO:0035295 GO:0035556 GO:0035966 GO:0035967 GO:0036211 GO:0036503 GO:0036506 GO:0042176 GO:0042177 GO:0042221 GO:0042771 GO:0042802 GO:0042981 GO:0043021 GO:0043022 GO:0043066 GO:0043067 GO:0043069 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043230 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043632 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044421 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0044703 GO:0044877 GO:0045048 GO:0045132 GO:0045143 GO:0045184 GO:0045321 GO:0045732 GO:0045861 GO:0045862 GO:0045995 GO:0046649 GO:0048002 GO:0048232 GO:0048285 GO:0048513 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048609 GO:0048731 GO:0048856 GO:0050776 GO:0050778 GO:0050789 GO:0050793 GO:0050794 GO:0050821 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051205 GO:0051234 GO:0051239 GO:0051246 GO:0051247 GO:0051248 GO:0051276 GO:0051321 GO:0051603 GO:0051641 GO:0051704 GO:0051716 GO:0051787 GO:0051788 GO:0060255 GO:0060322 GO:0060541 GO:0060548 GO:0061024 GO:0061136 GO:0061857 GO:0061982 GO:0065007 GO:0065008 GO:0070013 GO:0070059 GO:0070062 GO:0070192 GO:0070193 GO:0070628 GO:0070727 GO:0070887 GO:0071218 GO:0071310 GO:0071704 GO:0071712 GO:0071816 GO:0071818 GO:0071840 GO:0072001 GO:0072331 GO:0072332 GO:0072379 GO:0072657 GO:0080090 GO:0080134 GO:0080135 GO:0090150 GO:0097190 GO:0097193 GO:0098813 GO:0140013 GO:0140030 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1901799 GO:1901800 GO:1903046 GO:1903050 GO:1903051 GO:1903052 GO:1903362 GO:1903363 GO:1903364 GO:1903561 GO:1904292 GO:1904294 GO:1904378 GO:1905897 GO:1905898 GO:1990381 GO:2000026 GO:2000058 GO:2000059
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ubiquitin

Protein Analysis

719

Amino Acids

76.14

Weight (kDa)

5.55

Isoelectric Point (pI)

58.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 850
AatII GACGTC 1 cut(s) 507
Acc36I ACCTGC 4 cut(s) 850, 1111, 1756, 2023
AccB1I GGYRCC 2 cut(s) 1019, 1181
AccBSI CCGCTC 1 cut(s) 552
AccI GTMKAC 2 cut(s) 1219, 2101
AccII CGCG 1 cut(s) 2098
AciI CCGC 5 cut(s) 187, 552, 1394, 2024, 2072
AcoI YGGCCR 3 cut(s) 265, 735, 1039
AcsI RAATTY 3 cut(s) 1786, 1818, 1852
AcuI CTGAAG 1 cut(s) 1313
AcyI GRCGYC 1 cut(s) 504
AfaI GTAC 5 cut(s) 355, 868, 1045, 1842, 2013
AfiI CCNNNNNNNGG 9 cut(s) 407, 963, 1141, 1214, 1364, 1526, 1677, 1697, 2088
AflII CTTAAG 1 cut(s) 212
AflIII ACRYGT 1 cut(s) 1540
AgsI TTSAA 8 cut(s) 142, 386, 691, 890, 1034, 1163, 1538, 2139
AhdI GACNNNNNGTC 1 cut(s) 2097
AjnI CCWGG 4 cut(s) 514, 1207, 1807, 2002
AluBI AGCT 8 cut(s) 226, 590, 770, 896, 1199, 1418, 1547, 1913
AluI AGCT 8 cut(s) 226, 590, 770, 896, 1199, 1418, 1547, 1913
Alw21I GWGCWC 2 cut(s) 1201, 2043
Alw26I GTCTC 2 cut(s) 1408, 1650
AlwNI CAGNNNCTG 4 cut(s) 134, 338, 1649, 1913
AoxI GGCC 7 cut(s) 265, 527, 735, 1039, 1066, 1606, 2049
ApeKI GCWGC 1 cut(s) 1988
ApoI RAATTY 3 cut(s) 1786, 1818, 1852
ArsI GACNNNNNNTTYG 2 cut(s) 529, 561
Asp700I GAANNNNTTC 4 cut(s) 24, 771, 1279, 1852
AspS9I GGNCC 8 cut(s) 809, 1066, 1100, 1127, 1458, 1737, 1768, 2050
AsuC2I CCSGG 1 cut(s) 813
AsuHPI GGTGA 8 cut(s) 630, 685, 831, 1275, 1382, 1577, 1601, 1826
AvaII GGWCC 6 cut(s) 809, 1100, 1127, 1458, 1737, 1768
BaeI ACNNNNGTAYC 2 cut(s) 989, 1022
BalI TGGCCA 2 cut(s) 267, 737
BamHI GGATCC 3 cut(s) 511, 831, 952
BanI GGYRCC 2 cut(s) 1019, 1181
BanII GRGCYC 3 cut(s) 604, 1201, 1801
BbsI GAAGAC 2 cut(s) 370, 1620
Bbv12I GWGCWC 2 cut(s) 1201, 2043
BbvI GCAGC 1 cut(s) 2000
BceAI ACGGC 3 cut(s) 345, 1026, 1060
BciT130I CCWGG 4 cut(s) 516, 1209, 1809, 2004
BciVI GTATCC 1 cut(s) 254
BclI TGATCA 2 cut(s) 220, 1591
BcnI CCSGG 1 cut(s) 813
BcoDI GTCTC 2 cut(s) 1408, 1650
BfaI CTAG 5 cut(s) 351, 1731, 1857, 1995, 2133
BfmI CTRYAG 4 cut(s) 462, 1104, 1202, 2016
BfrI CTTAAG 1 cut(s) 212
BfuAI ACCTGC 4 cut(s) 850, 1111, 1756, 2023
BfuI GTATCC 1 cut(s) 254
BisI GCNGC 2 cut(s) 188, 1989
BlsI GCNGC 2 cut(s) 189, 1990
Bme1390I CCNGG 5 cut(s) 516, 813, 1209, 1809, 2004
Bme18I GGWCC 6 cut(s) 809, 1100, 1127, 1458, 1737, 1768
BmeRI GACNNNNNGTC 1 cut(s) 2097
BmgT120I GGNCC 8 cut(s) 809, 1066, 1100, 1127, 1458, 1737, 1768, 2050
BmrFI CCNGG 5 cut(s) 516, 813, 1209, 1809, 2004
BmsI GCATC 5 cut(s) 114, 854, 1072, 1327, 1592
BpiI GAAGAC 2 cut(s) 370, 1620
BpmI CTGGAG 3 cut(s) 918, 1446, 1890
BpuEI CTTGAG 2 cut(s) 1563, 1968
BpuMI CCSGG 1 cut(s) 813
BsaAI YACGTR 1 cut(s) 1825
BsaBI GATNNNNATC 1 cut(s) 1596
BsaHI GRCGYC 1 cut(s) 504
BsaJI CCNNGG 9 cut(s) 312, 361, 515, 957, 1191, 1250, 1525, 1919, 2067
Bsc4I CCNNNNNNNGG 9 cut(s) 407, 963, 1141, 1214, 1364, 1526, 1677, 1697, 2088
Bse118I RCCGGY 1 cut(s) 1604
Bse1I ACTGG 9 cut(s) 128, 169, 925, 981, 1000, 1129, 1451, 1470, 1702
Bse3DI GCAATG 1 cut(s) 1055
Bse8I GATNNNNATC 1 cut(s) 1596
BseBI CCWGG 4 cut(s) 516, 1209, 1809, 2004
BseDI CCNNGG 9 cut(s) 312, 361, 515, 957, 1191, 1250, 1525, 1919, 2067
BseJI GATNNNNATC 1 cut(s) 1596
BseLI CCNNNNNNNGG 9 cut(s) 407, 963, 1141, 1214, 1364, 1526, 1677, 1697, 2088
BseMI GCAATG 1 cut(s) 1055
BseMII CTCAG 6 cut(s) 701, 1365, 1419, 1476, 1749, 2028
BseNI ACTGG 9 cut(s) 128, 169, 925, 981, 1000, 1129, 1451, 1470, 1702
BseRI GAGGAG 1 cut(s) 1328
BseXI GCAGC 1 cut(s) 2000
Bsh1236I CGCG 1 cut(s) 2098
Bsh1285I CGRYCG 1 cut(s) 371
BshFI GGCC 7 cut(s) 267, 529, 737, 1041, 1068, 1608, 2051
BshNI GGYRCC 2 cut(s) 1019, 1181
BsiEI CGRYCG 1 cut(s) 371
BsiHKAI GWGCWC 2 cut(s) 1201, 2043
BsiSI CCGG 2 cut(s) 813, 1605
BslFI GGGAC 6 cut(s) 330, 532, 795, 1750, 1754, 2104
BslI CCNNNNNNNGG 9 cut(s) 407, 963, 1141, 1214, 1364, 1526, 1677, 1697, 2088
BsmAI GTCTC 2 cut(s) 1408, 1650
BsmBI CGTCTC 1 cut(s) 1650
BsmFI GGGAC 6 cut(s) 330, 532, 795, 1750, 1754, 2104
BsnI GGCC 7 cut(s) 267, 529, 737, 1041, 1068, 1608, 2051
Bsp1286I GDGCHC 4 cut(s) 604, 1201, 1801, 2043
Bsp1407I TGTACA 1 cut(s) 1840
Bsp19I CCATGG 1 cut(s) 1191
BspACI CCGC 5 cut(s) 187, 552, 1394, 2024, 2072
BspANI GGCC 7 cut(s) 267, 529, 737, 1041, 1068, 1608, 2051
BspCNI CTCAG 6 cut(s) 702, 1364, 1418, 1477, 1750, 2029
BspFNI CGCG 1 cut(s) 2098
BspMAI CTGCAG 2 cut(s) 1108, 2020
BspMI ACCTGC 4 cut(s) 850, 1111, 1756, 2023
BspT107I GGYRCC 2 cut(s) 1019, 1181
BspTI CTTAAG 1 cut(s) 212
BsrBI CCGCTC 1 cut(s) 552
BsrDI GCAATG 1 cut(s) 1055
BsrFI RCCGGY 1 cut(s) 1604
BsrGI TGTACA 1 cut(s) 1840
BsrI ACTGG 9 cut(s) 128, 169, 925, 981, 1000, 1129, 1451, 1470, 1702
BssAI RCCGGY 1 cut(s) 1604
BssECI CCNNGG 9 cut(s) 312, 361, 515, 957, 1191, 1250, 1525, 1919, 2067
BssNI GRCGYC 1 cut(s) 504
BssT1I CCWWGG 3 cut(s) 1191, 1250, 1919
Bst2UI CCWGG 4 cut(s) 516, 1209, 1809, 2004
Bst4CI ACNGT 3 cut(s) 1462, 1565, 2068
Bst6I CTCTTC 4 cut(s) 1158, 1270, 2038, 2065
BstACI GRCGYC 1 cut(s) 504
BstAFI CTTAAG 1 cut(s) 212
BstAUI TGTACA 1 cut(s) 1840
BstBAI YACGTR 1 cut(s) 1825
BstC8I GCNNGC 3 cut(s) 588, 922, 1606
BstDEI CTNAG 7 cut(s) 710, 1351, 1405, 1485, 1758, 1793, 2037
BstDSI CCRYGG 3 cut(s) 361, 1191, 2067
BstFNI CGCG 1 cut(s) 2098
BstMAI GTCTC 2 cut(s) 1408, 1650
BstMCI CGRYCG 1 cut(s) 371
BstMWI GCNNNNNNNGC 8 cut(s) 178, 187, 495, 851, 1103, 1910, 1935, 2078
BstNI CCWGG 4 cut(s) 516, 1209, 1809, 2004
BstNSI RCATGY 1 cut(s) 1544
BstSCI CCNGG 5 cut(s) 514, 811, 1207, 1807, 2002
BstSFI CTRYAG 4 cut(s) 462, 1104, 1202, 2016
BstUI CGCG 1 cut(s) 2098
BstV1I GCAGC 1 cut(s) 2000
BstV2I GAAGAC 2 cut(s) 370, 1620
BstX2I RGATCY 6 cut(s) 511, 831, 952, 1574, 1645, 1687
BstXI CCANNNNNNTGG 1 cut(s) 1192
BstYI RGATCY 6 cut(s) 511, 831, 952, 1574, 1645, 1687
BsuI GTATCC 1 cut(s) 254
BsuRI GGCC 7 cut(s) 267, 529, 737, 1041, 1068, 1608, 2051
BtgI CCRYGG 3 cut(s) 361, 1191, 2067
BtgZI GCGATG 1 cut(s) 2079
BtsI GCAGTG 3 cut(s) 496, 1293, 1843
BtsIMutI CAGTG 7 cut(s) 400, 496, 988, 1293, 1614, 1695, 1843
BveI ACCTGC 4 cut(s) 850, 1111, 1756, 2023
Cac8I GCNNGC 3 cut(s) 588, 922, 1606
CaiI CAGNNNCTG 4 cut(s) 134, 338, 1649, 1913
Cfr10I RCCGGY 1 cut(s) 1604
Cfr13I GGNCC 8 cut(s) 809, 1066, 1100, 1127, 1458, 1737, 1768, 2050
CseI GACGC 2 cut(s) 765, 2087
Csp6I GTAC 5 cut(s) 354, 867, 1044, 1841, 2012
CviAII CATG 2 cut(s) 1192, 1541
CviQI GTAC 5 cut(s) 354, 867, 1044, 1841, 2012
DdeI CTNAG 7 cut(s) 710, 1351, 1405, 1485, 1758, 1793, 2037
DraI TTTAAA 1 cut(s) 1785
DriI GACNNNNNGTC 1 cut(s) 2097
EaeI YGGCCR 3 cut(s) 265, 735, 1039
Eam1104I CTCTTC 4 cut(s) 1158, 1270, 2038, 2065
Eam1105I GACNNNNNGTC 1 cut(s) 2097
EarI CTCTTC 4 cut(s) 1158, 1270, 2038, 2065
EciI GGCGGA 1 cut(s) 2087
Ecl136II GAGCTC 1 cut(s) 1199
Eco130I CCWWGG 3 cut(s) 1191, 1250, 1919
Eco24I GRGCYC 3 cut(s) 604, 1201, 1801
Eco32I GATATC 2 cut(s) 707, 1980
Eco47I GGWCC 6 cut(s) 809, 1100, 1127, 1458, 1737, 1768
Eco53kI GAGCTC 1 cut(s) 1199
Eco57I CTGAAG 1 cut(s) 1313
EcoICRI GAGCTC 1 cut(s) 1199
EcoO109I RGGNCCY 3 cut(s) 809, 1737, 1768
EcoRI GAATTC 1 cut(s) 1852
EcoRII CCWGG 4 cut(s) 514, 1207, 1807, 2002
EcoRV GATATC 2 cut(s) 707, 1980
EcoT14I CCWWGG 3 cut(s) 1191, 1250, 1919
EcoT38I GRGCYC 3 cut(s) 604, 1201, 1801
ErhI CCWWGG 3 cut(s) 1191, 1250, 1919
Esp3I CGTCTC 1 cut(s) 1650
FaeI CATG 2 cut(s) 1195, 1544
FaqI GGGAC 6 cut(s) 330, 532, 795, 1750, 1754, 2104
FatI CATG 2 cut(s) 1191, 1540
FbaI TGATCA 2 cut(s) 220, 1591
FblI GTMKAC 2 cut(s) 1219, 2101
Fnu4HI GCNGC 2 cut(s) 188, 1989
FriOI GRGCYC 3 cut(s) 604, 1201, 1801
Fsp4HI GCNGC 2 cut(s) 188, 1989
FspBI CTAG 5 cut(s) 351, 1731, 1857, 1995, 2133
GluI GCNGC 2 cut(s) 188, 1989
GsuI CTGGAG 3 cut(s) 918, 1446, 1890
HaeIII GGCC 7 cut(s) 267, 529, 737, 1041, 1068, 1608, 2051
HapII CCGG 2 cut(s) 813, 1605
HgaI GACGC 2 cut(s) 765, 2087
Hin1I GRCGYC 1 cut(s) 504
Hin1II CATG 2 cut(s) 1195, 1544
HincII GTYRAC 2 cut(s) 502, 2102
HindII GTYRAC 2 cut(s) 502, 2102
HpaII CCGG 2 cut(s) 813, 1605
HphI GGTGA 8 cut(s) 630, 685, 831, 1275, 1382, 1577, 1601, 1826
Hpy166II GTNNAC 8 cut(s) 56, 502, 1028, 1220, 1283, 1561, 1841, 2102
Hpy8I GTNNAC 8 cut(s) 56, 502, 1028, 1220, 1283, 1561, 1841, 2102
Hpy99I CGWCG 1 cut(s) 2103
HpyAV CCTTC 7 cut(s) 315, 488, 846, 1347, 1524, 1928, 2146
HpyCH4III ACNGT 3 cut(s) 1462, 1565, 2068
HpyCH4IV ACGT 3 cut(s) 504, 1824, 2143
HpyCH4V TGCA 8 cut(s) 198, 845, 920, 986, 1060, 1106, 1652, 2018
HpyF10VI GCNNNNNNNGC 8 cut(s) 178, 187, 495, 851, 1103, 1910, 1935, 2078
HpyF3I CTNAG 7 cut(s) 710, 1351, 1405, 1485, 1758, 1793, 2037
HpySE526I ACGT 3 cut(s) 504, 1824, 2143
Hsp92I GRCGYC 1 cut(s) 504
Hsp92II CATG 2 cut(s) 1195, 1544
KflI GGGWCCC 1 cut(s) 1737
KroI GCCGGC 1 cut(s) 1604
KroNI GCCGGC 1 cut(s) 1606
Ksp22I TGATCA 2 cut(s) 220, 1591
LmnI GCTCC 4 cut(s) 583, 1196, 1315, 1909
Lsp1109I GCAGC 1 cut(s) 2000
LweI GCATC 5 cut(s) 114, 854, 1072, 1327, 1592
MaeI CTAG 5 cut(s) 351, 1731, 1857, 1995, 2133
MaeII ACGT 3 cut(s) 504, 1824, 2143
MaeIII GTNAC 4 cut(s) 160, 505, 632, 946
MbiI CCGCTC 1 cut(s) 552
MboII GAAGA 9 cut(s) 370, 1145, 1287, 1319, 1620, 1841, 1943, 2025, 2052
MflI RGATCY 6 cut(s) 511, 831, 952, 1574, 1645, 1687
MhlI GDGCHC 4 cut(s) 604, 1201, 1801, 2043
MlsI TGGCCA 2 cut(s) 267, 737
MluCI AATT 6 cut(s) 796, 1012, 1786, 1818, 1852, 1951
MluNI TGGCCA 2 cut(s) 267, 737
MlyI GAGTC 3 cut(s) 721, 1496, 2051
MmeI TCCRAC 1 cut(s) 909
Mox20I TGGCCA 2 cut(s) 267, 737
MroNI GCCGGC 1 cut(s) 1604
MroXI GAANNNNTTC 4 cut(s) 24, 771, 1279, 1852
MscI TGGCCA 2 cut(s) 267, 737
MseI TTAA 5 cut(s) 213, 1092, 1224, 1611, 1784
MslI CAYNNNNRTG 2 cut(s) 780, 1190
Msp20I TGGCCA 2 cut(s) 267, 737
MspA1I CMGCKG 1 cut(s) 187
MspCI CTTAAG 1 cut(s) 212
MspI CCGG 2 cut(s) 813, 1605
MspR9I CCNGG 5 cut(s) 516, 813, 1209, 1809, 2004
MvaI CCWGG 4 cut(s) 516, 1209, 1809, 2004
MvnI CGCG 1 cut(s) 2098
MwoI GCNNNNNNNGC 8 cut(s) 178, 187, 495, 851, 1103, 1910, 1935, 2078
NaeI GCCGGC 1 cut(s) 1606
NciI CCSGG 1 cut(s) 813
NcoI CCATGG 1 cut(s) 1191
NgoMIV GCCGGC 1 cut(s) 1604
NlaIII CATG 2 cut(s) 1195, 1544
NmeAIII GCCGAG 2 cut(s) 435, 938
NmuCI GTSAC 3 cut(s) 505, 632, 946
NspI RCATGY 1 cut(s) 1544
PaqCI CACCTGC 1 cut(s) 850
PciI ACATGT 1 cut(s) 1540
PdiI GCCGGC 1 cut(s) 1606
PdmI GAANNNNTTC 4 cut(s) 24, 771, 1279, 1852
PflFI GACNNNGTC 2 cut(s) 759, 2106
PfoI TCCNGGA 1 cut(s) 811
PkrI GCNGC 2 cut(s) 189, 1990
Ple19I CGATCG 1 cut(s) 371
PleI GAGTC 3 cut(s) 720, 1495, 2051
PpsI GAGTC 3 cut(s) 720, 1495, 2051
Ppu21I YACGTR 1 cut(s) 1825
PpuMI RGGWCCY 3 cut(s) 809, 1737, 1768
PscI ACATGT 1 cut(s) 1540
Psp124BI GAGCTC 1 cut(s) 1201
Psp5II RGGWCCY 3 cut(s) 809, 1737, 1768
Psp6I CCWGG 4 cut(s) 514, 1207, 1807, 2002
PspGI CCWGG 4 cut(s) 514, 1207, 1807, 2002
PspPI GGNCC 8 cut(s) 809, 1066, 1100, 1127, 1458, 1737, 1768, 2050
PspPPI RGGWCCY 3 cut(s) 809, 1737, 1768
PstI CTGCAG 2 cut(s) 1108, 2020
PstNI CAGNNNCTG 4 cut(s) 134, 338, 1649, 1913
PsuI RGATCY 6 cut(s) 511, 831, 952, 1574, 1645, 1687
PsyI GACNNNGTC 2 cut(s) 759, 2106
PvuI CGATCG 1 cut(s) 371
RsaI GTAC 5 cut(s) 355, 868, 1045, 1842, 2013
RsaNI GTAC 5 cut(s) 354, 867, 1044, 1841, 2012
RseI CAYNNNNRTG 2 cut(s) 780, 1190
SacI GAGCTC 1 cut(s) 1201
SalI GTCGAC 1 cut(s) 2100
SaqAI TTAA 5 cut(s) 213, 1092, 1224, 1611, 1784
SatI GCNGC 2 cut(s) 188, 1989
Sau96I GGNCC 8 cut(s) 809, 1066, 1100, 1127, 1458, 1737, 1768, 2050
SchI GAGTC 3 cut(s) 721, 1496, 2051
ScrFI CCNGG 5 cut(s) 516, 813, 1209, 1809, 2004
SduI GDGCHC 4 cut(s) 604, 1201, 1801, 2043
SfaNI GCATC 5 cut(s) 114, 854, 1072, 1327, 1592
SfcI CTRYAG 4 cut(s) 462, 1104, 1202, 2016
SinI GGWCC 6 cut(s) 809, 1100, 1127, 1458, 1737, 1768
SmiMI CAYNNNNRTG 2 cut(s) 780, 1190
SmlI CTYRAG 3 cut(s) 212, 1578, 1983
SmoI CTYRAG 3 cut(s) 212, 1578, 1983
Sse9I AATT 6 cut(s) 796, 1012, 1786, 1818, 1852, 1951
SsiI CCGC 5 cut(s) 187, 552, 1394, 2024, 2072
SspMI CTAG 5 cut(s) 351, 1731, 1857, 1995, 2133
SstI GAGCTC 1 cut(s) 1201
StyD4I CCNGG 5 cut(s) 514, 811, 1207, 1807, 2002
StyI CCWWGG 3 cut(s) 1191, 1250, 1919
TaaI ACNGT 3 cut(s) 1462, 1565, 2068
TaiI ACGT 3 cut(s) 507, 1827, 2146
TaqI TCGA 8 cut(s) 367, 371, 703, 874, 913, 1309, 1502, 2101
TasI AATT 6 cut(s) 796, 1012, 1786, 1818, 1852, 1951
TatI WGTACW 2 cut(s) 353, 1840
TauI GCSGC 1 cut(s) 190
Tru1I TTAA 5 cut(s) 213, 1092, 1224, 1611, 1784
Tru9I TTAA 5 cut(s) 213, 1092, 1224, 1611, 1784
TscAI CASTG 7 cut(s) 400, 496, 988, 1300, 1621, 1702, 1843
TseFI GTSAC 3 cut(s) 505, 632, 946
TseI GCWGC 1 cut(s) 1988
Tsp45I GTSAC 3 cut(s) 505, 632, 946
TspDTI ATGAA 7 cut(s) 297, 370, 764, 1102, 1235, 1865, 1949
TspGWI ACGGA 5 cut(s) 524, 854, 965, 979, 1674
TspRI CASTG 7 cut(s) 400, 496, 988, 1300, 1621, 1702, 1843
Tth111I GACNNNGTC 2 cut(s) 759, 2106
Vha464I CTTAAG 1 cut(s) 212
VpaK11BI GGWCC 6 cut(s) 809, 1100, 1127, 1458, 1737, 1768
XapI RAATTY 3 cut(s) 1786, 1818, 1852
XceI RCATGY 1 cut(s) 1544
XmiI GTMKAC 2 cut(s) 1219, 2101
XmnI GAANNNNTTC 4 cut(s) 24, 771, 1279, 1852
XspI CTAG 5 cut(s) 351, 1731, 1857, 1995, 2133
ZraI GACGTC 1 cut(s) 505
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.