Rorug01G0469400

Large proline-rich protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0007815
Physical Location & Seq
Reverse (-)
56130813 .. 56134184
3372 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0469400.1

Sequence Viewer

Length: 1044 bp
ATGGGGGGCGACTGGCAGCAGCTGCTCCAATCGGTCGTCCTCGGCCTCATTTTCTCCTACCTACTCGCCAAGCTCATCTCCATAGTCGTCTCCTTCAAGGACGACAACCTCACCATCACACGCGCCAGCACTGCCGCCGCCCCGGCCGGGCCCAAAACCGACGACCCGGCCCGCTCCGCCGAATCGGGCGCCTTGCTCCACGAGGCCGATTCGGTGGTGGCGGAGCACGGGAGTGTCAGGAACGACAGCGCCGGCAGCGAGGTCGGGAGCGACGATGACTGGGAAGGCGTGGAGAGTACGGAACTGGACGAGATTTTCAGCGCCGCTACGGCGTTTGTGGCGGCGGCCGCGGCGGACAGGACGAAGGTGTCGACGGAGGCGCAGTTGCAGCTCTATGGGCTCTACAAGATCGCCACTGAGGGCCCCTGTAGCGTGCCCCAGCCTTCCGCGCTGAAAATGACGGCTCGCGCCAAGTGGCAAGCATGGCAGAAATTGGGTGCTATGCCTCCTGAGGATGCGATGGAGAAGTACATTGATATTGTTAGTGAGCTATATCCTACTTGGACTGATGGTTTGATTGTGAGCAAAGGTGGAGATGGTAGCTCGGTTGGTAATGATTCGAAAGGACCGATGGGACCGGTTTTCAGCACTTTTGTTTATGAGGAGGGATCTGGAAATGATTTCAAGATGGATGCTATACATGCCTTTGCCAGAGAAGGAGAAGTGGATAATTTGCTTAAATGCATTGATAGTGGTGTTTCAGTTGATGCAAAGGATAGTGAGGGAAGGACCCCATTGCATTGGGCTGTTGATCGTGGCCACCTAAACATGGCCGAGATGCTTGTCAGCAGGAATGCTGATGTTAATGCAAAGGACAATGAGGGCCAAACCGCATTGCATTATGCTGCTGTGTGTGAGAGAGAAGGCATCGCTGAATATCTGGTGAAGAAAAACGCAGACACAAACGTGAAAGACAACGATGGCAACTCTCCGTCTGATCTTTGTGAGTCAAAATGGCCTTGGCTGCAGCATGCAAAGGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000280 GO:0001655 GO:0001775 GO:0001822 GO:0002020 GO:0002253 GO:0002376 GO:0002429 GO:0002474 GO:0002682 GO:0002684 GO:0002757 GO:0002764 GO:0002768 GO:0003674 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006464 GO:0006473 GO:0006475 GO:0006508 GO:0006511 GO:0006515 GO:0006807 GO:0006915 GO:0006950 GO:0006974 GO:0006996 GO:0007029 GO:0007049 GO:0007059 GO:0007127 GO:0007129 GO:0007130 GO:0007154 GO:0007165 GO:0007166 GO:0007275 GO:0007276 GO:0007283 GO:0007399 GO:0007417 GO:0007420 GO:0008104 GO:0008150 GO:0008152 GO:0008219 GO:0008630 GO:0009056 GO:0009057 GO:0009892 GO:0009893 GO:0009894 GO:0009895 GO:0009896 GO:0009987 GO:0010033 GO:0010243 GO:0010256 GO:0010498 GO:0010604 GO:0010605 GO:0010941 GO:0012501 GO:0016020 GO:0016043 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019222 GO:0019538 GO:0019882 GO:0019899 GO:0019941 GO:0019953 GO:0022402 GO:0022414 GO:0022607 GO:0023052 GO:0030101 GO:0030162 GO:0030163 GO:0030323 GO:0030324 GO:0030433 GO:0030544 GO:0031072 GO:0031323 GO:0031324 GO:0031325 GO:0031329 GO:0031330 GO:0031331 GO:0031593 GO:0031625 GO:0031647 GO:0031974 GO:0031981 GO:0031982 GO:0032268 GO:0032269 GO:0032270 GO:0032434 GO:0032435 GO:0032501 GO:0032502 GO:0032504 GO:0032991 GO:0033036 GO:0033365 GO:0033554 GO:0034613 GO:0034976 GO:0035295 GO:0035556 GO:0035966 GO:0035967 GO:0036211 GO:0036503 GO:0036506 GO:0042176 GO:0042177 GO:0042221 GO:0042771 GO:0042802 GO:0042981 GO:0043021 GO:0043022 GO:0043066 GO:0043067 GO:0043069 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043230 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043632 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044389 GO:0044421 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0044703 GO:0044877 GO:0045048 GO:0045132 GO:0045143 GO:0045184 GO:0045321 GO:0045732 GO:0045861 GO:0045862 GO:0045995 GO:0046649 GO:0048002 GO:0048232 GO:0048285 GO:0048513 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048609 GO:0048731 GO:0048856 GO:0050776 GO:0050778 GO:0050789 GO:0050793 GO:0050794 GO:0050821 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051205 GO:0051234 GO:0051239 GO:0051246 GO:0051247 GO:0051248 GO:0051276 GO:0051321 GO:0051603 GO:0051641 GO:0051704 GO:0051716 GO:0051787 GO:0051788 GO:0060255 GO:0060322 GO:0060541 GO:0060548 GO:0061024 GO:0061136 GO:0061857 GO:0061982 GO:0065007 GO:0065008 GO:0070013 GO:0070059 GO:0070062 GO:0070192 GO:0070193 GO:0070628 GO:0070727 GO:0070887 GO:0071218 GO:0071310 GO:0071704 GO:0071712 GO:0071816 GO:0071818 GO:0071840 GO:0072001 GO:0072331 GO:0072332 GO:0072379 GO:0072657 GO:0080090 GO:0080134 GO:0080135 GO:0090150 GO:0097190 GO:0097193 GO:0098813 GO:0140013 GO:0140030 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1901799 GO:1901800 GO:1903046 GO:1903050 GO:1903051 GO:1903052 GO:1903362 GO:1903363 GO:1903364 GO:1903561 GO:1904292 GO:1904294 GO:1904378 GO:1905897 GO:1905898 GO:1990381 GO:2000026 GO:2000058 GO:2000059
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ubiquitin

Protein Analysis

347

Amino Acids

37.23

Weight (kDa)

4.57

Isoelectric Point (pI)

29.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ACBP PF00887 104 - 181 2.1e-26 Acyl CoA binding protein
Ank_2 PF12796 225 - 292 1.2e-11 Ankyrin repeats (3 copies)
Ank_4 PF13637 233 - 282 1.1e-09 Ankyrin repeats (many copies)
Ank_2 PF12796 234 - 325 3.6e-19 Ankyrin repeats (3 copies)
Ank_5 PF13857 253 - 302 1e-11 Ankyrin repeats (many copies)
Ank_3 PF13606 261 - 290 1e-05 Ankyrin repeat
Ank PF00023 262 - 293 3.4e-10 Ankyrin repeat
Ank_4 PF13637 266 - 315 2.9e-10 Ankyrin repeats (many copies)
Ank_5 PF13857 286 - 334 4.6e-08 Ankyrin repeats (many copies)
Ank PF00023 295 - 326 1.5e-06 Ankyrin repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 367
AccB1I GGYRCC 1 cut(s) 188
AccBSI CCGCTC 1 cut(s) 174
AccI GTMKAC 1 cut(s) 371
AccII CGCG 4 cut(s) 123, 350, 449, 468
AclWI GGATC 1 cut(s) 676
AcoI YGGCCR 4 cut(s) 144, 345, 817, 831
AcyI GRCGYC 1 cut(s) 189
AfaI GTAC 2 cut(s) 298, 530
AfiI CCNNNNNNNGG 2 cut(s) 147, 829
AgeI ACCGGT 1 cut(s) 637
AgsI TTSAA 2 cut(s) 97, 685
AleI CACNNNNGTG 2 cut(s) 231, 965
AluBI AGCT 5 cut(s) 22, 73, 391, 550, 603
AluI AGCT 5 cut(s) 22, 73, 391, 550, 603
Alw21I GWGCWC 1 cut(s) 228
Alw26I GTCTC 1 cut(s) 94
AlwI GGATC 1 cut(s) 676
AlwNI CAGNNNCTG 1 cut(s) 22
ApaI GGGCCC 2 cut(s) 153, 425
ApeKI GCWGC 8 cut(s) 16, 19, 22, 255, 388, 905, 1024, 1027
ArsI GACNNNNNNTTYG 2 cut(s) 556, 588
AsiGI ACCGGT 1 cut(s) 637
AspLEI GCGC 7 cut(s) 125, 191, 251, 323, 382, 451, 470
AspS9I GGNCC 9 cut(s) 149, 150, 169, 421, 422, 626, 635, 789, 883
AsuC2I CCSGG 3 cut(s) 143, 148, 167
AsuHPI GGTGA 2 cut(s) 103, 955
AsuII TTCGAA 1 cut(s) 620
AvaII GGWCC 3 cut(s) 626, 635, 789
AxyI CCTNAGG 1 cut(s) 510
BaeGI GKGCMC 3 cut(s) 153, 425, 438
BalI TGGCCA 1 cut(s) 819
BanI GGYRCC 1 cut(s) 188
BanII GRGCYC 3 cut(s) 153, 402, 425
BauI CACGAG 1 cut(s) 200
Bbv12I GWGCWC 1 cut(s) 228
BbvI GCAGC 8 cut(s) 9, 28, 31, 267, 400, 892, 1011, 1039
BccI CCATC 7 cut(s) 122, 514, 563, 590, 625, 682, 974
BceAI ACGGC 2 cut(s) 345, 477
BcgI CGANNNNNNTGC 2 cut(s) 244, 278
BcnI CCSGG 3 cut(s) 143, 148, 167
BcoDI GTCTC 1 cut(s) 94
BfmI CTRYAG 2 cut(s) 427, 1025
BfoI RGCGCY 3 cut(s) 192, 252, 324
BglI GCCNNNNNGGC 2 cut(s) 143, 329
Bme1390I CCNGG 3 cut(s) 143, 148, 167
Bme18I GGWCC 3 cut(s) 626, 635, 789
BmgT120I GGNCC 9 cut(s) 149, 150, 169, 421, 422, 626, 635, 789, 883
BmiI GGNNCC 6 cut(s) 151, 190, 423, 424, 636, 791
BmrFI CCNGG 3 cut(s) 143, 148, 167
BmrI ACTGGG 1 cut(s) 289
BmsI GCATC 5 cut(s) 505, 682, 757, 828, 936
BmuI ACTGGG 1 cut(s) 289
Bpu14I TTCGAA 1 cut(s) 620
BpuMI CCSGG 3 cut(s) 143, 148, 167
BsaHI GRCGYC 1 cut(s) 189
BsaJI CCNNGG 4 cut(s) 40, 141, 348, 1019
BsaWI WCCGGW 1 cut(s) 637
BsaXI ACNNNNNCTCC 2 cut(s) 368, 398
Bsc4I CCNNNNNNNGG 2 cut(s) 147, 829
Bse118I RCCGGY 2 cut(s) 251, 637
Bse1I ACTGG 3 cut(s) 17, 284, 309
Bse21I CCTNAGG 1 cut(s) 510
Bse3DI GCAATG 2 cut(s) 794, 893
BseDI CCNNGG 4 cut(s) 40, 141, 348, 1019
BseGI GGATG 2 cut(s) 520, 697
BseLI CCNNNNNNNGG 2 cut(s) 147, 829
BseMI GCAATG 2 cut(s) 794, 893
BseMII CTCAG 2 cut(s) 408, 501
BseNI ACTGG 3 cut(s) 17, 284, 309
BseRI GAGGAG 1 cut(s) 677
BseSI GKGCMC 3 cut(s) 153, 425, 438
BseX3I CGGCCG 2 cut(s) 144, 345
BseXI GCAGC 8 cut(s) 9, 28, 31, 267, 400, 892, 1011, 1039
BseYI CCCAGC 1 cut(s) 438
Bsh1236I CGCG 4 cut(s) 123, 350, 449, 468
Bsh1285I CGRYCG 3 cut(s) 36, 147, 348
BshNI GGYRCC 1 cut(s) 188
BshTI ACCGGT 1 cut(s) 637
BsiEI CGRYCG 3 cut(s) 36, 147, 348
BsiHKAI GWGCWC 1 cut(s) 228
BsiSI CCGG 5 cut(s) 143, 147, 167, 252, 638
BslFI GGGAC 1 cut(s) 648
BslI CCNNNNNNNGG 2 cut(s) 147, 829
BsmAI GTCTC 1 cut(s) 94
BsmBI CGTCTC 1 cut(s) 94
BsmFI GGGAC 1 cut(s) 648
BsmI GAATGC 1 cut(s) 859
Bsp119I TTCGAA 1 cut(s) 620
Bsp120I GGGCCC 2 cut(s) 149, 421
Bsp1286I GDGCHC 5 cut(s) 153, 228, 402, 425, 438
Bsp143I GATC 4 cut(s) 408, 668, 811, 997
BspCNI CTCAG 2 cut(s) 409, 502
BspFNI CGCG 4 cut(s) 123, 350, 449, 468
BspLI GGNNCC 6 cut(s) 151, 190, 423, 424, 636, 791
BspMAI CTGCAG 1 cut(s) 1029
BspPI GGATC 1 cut(s) 676
BspT104I TTCGAA 1 cut(s) 620
BspT107I GGYRCC 1 cut(s) 188
BsrBI CCGCTC 1 cut(s) 174
BsrDI GCAATG 2 cut(s) 794, 893
BsrFI RCCGGY 2 cut(s) 251, 637
BsrI ACTGG 3 cut(s) 17, 284, 309
BssAI RCCGGY 2 cut(s) 251, 637
BssECI CCNNGG 4 cut(s) 40, 141, 348, 1019
BssMI GATC 4 cut(s) 408, 668, 811, 997
BssNI GRCGYC 1 cut(s) 189
BssSI CACGAG 1 cut(s) 200
BssT1I CCWWGG 1 cut(s) 1019
Bst2BI CACGAG 1 cut(s) 200
BstACI GRCGYC 1 cut(s) 189
BstAPI GCANNNNNTGC 1 cut(s) 22
BstBI TTCGAA 1 cut(s) 620
BstC8I GCNNGC 7 cut(s) 127, 172, 253, 434, 466, 480, 1032
BstDEI CTNAG 2 cut(s) 417, 510
BstDSI CCRYGG 1 cut(s) 348
BstF5I GGATG 2 cut(s) 520, 697
BstFNI CGCG 4 cut(s) 123, 350, 449, 468
BstH2I RGCGCY 3 cut(s) 192, 252, 324
BstHHI GCGC 7 cut(s) 125, 191, 251, 323, 382, 451, 470
BstKTI GATC 4 cut(s) 411, 671, 814, 1000
BstMAI GTCTC 1 cut(s) 94
BstMBI GATC 4 cut(s) 408, 668, 811, 997
BstMCI CGRYCG 3 cut(s) 36, 147, 348
BstNSI RCATGY 2 cut(s) 704, 1034
BstSCI CCNGG 3 cut(s) 141, 146, 165
BstSFI CTRYAG 2 cut(s) 427, 1025
BstSLI GKGCMC 3 cut(s) 153, 425, 438
BstUI CGCG 4 cut(s) 123, 350, 449, 468
BstV1I GCAGC 8 cut(s) 9, 28, 31, 267, 400, 892, 1011, 1039
BstX2I RGATCY 1 cut(s) 668
BstXI CCANNNNNNTGG 1 cut(s) 801
BstYI RGATCY 1 cut(s) 668
BstZI CGGCCG 2 cut(s) 144, 345
Bsu36I CCTNAGG 1 cut(s) 510
BtgI CCRYGG 1 cut(s) 348
BtgZI GCGATG 2 cut(s) 533, 913
BtsCI GGATG 2 cut(s) 520, 697
BtsI GCAGTG 1 cut(s) 129
BtsIMutI CAGTG 2 cut(s) 129, 414
Cac8I GCNNGC 7 cut(s) 127, 172, 253, 434, 466, 480, 1032
CaiI CAGNNNCTG 1 cut(s) 22
CciNI GCGGCCGC 1 cut(s) 345
CfoI GCGC 7 cut(s) 125, 191, 251, 323, 382, 451, 470
Cfr10I RCCGGY 2 cut(s) 251, 637
Cfr13I GGNCC 9 cut(s) 149, 150, 169, 421, 422, 626, 635, 789, 883
Cfr42I CCGCGG 1 cut(s) 351
Csp6I GTAC 2 cut(s) 297, 529
CspAI ACCGGT 1 cut(s) 637
CviAII CATG 4 cut(s) 483, 701, 829, 1031
CviQI GTAC 2 cut(s) 297, 529
DdeI CTNAG 2 cut(s) 417, 510
DinI GGCGCC 1 cut(s) 190
DpnI GATC 4 cut(s) 410, 670, 813, 999
DpnII GATC 4 cut(s) 408, 668, 811, 997
DrdI GACNNNNNNGTC 1 cut(s) 367
DseDI GACNNNNNNGTC 1 cut(s) 367
EaeI YGGCCR 4 cut(s) 144, 345, 817, 831
EagI CGGCCG 2 cut(s) 144, 345
EciI GGCGGA 3 cut(s) 166, 236, 368
EclXI CGGCCG 2 cut(s) 144, 345
Eco130I CCWWGG 1 cut(s) 1019
Eco24I GRGCYC 3 cut(s) 153, 402, 425
Eco47I GGWCC 3 cut(s) 626, 635, 789
Eco52I CGGCCG 2 cut(s) 144, 345
Eco81I CCTNAGG 1 cut(s) 510
EcoO109I RGGNCCY 3 cut(s) 421, 422, 789
EcoT14I CCWWGG 1 cut(s) 1019
EcoT22I ATGCAT 1 cut(s) 746
EcoT38I GRGCYC 3 cut(s) 153, 402, 425
EgeI GGCGCC 1 cut(s) 190
EheI GGCGCC 1 cut(s) 190
ErhI CCWWGG 1 cut(s) 1019
Esp3I CGTCTC 1 cut(s) 94
FaeI CATG 4 cut(s) 486, 704, 832, 1034
FaqI GGGAC 1 cut(s) 648
FatI CATG 4 cut(s) 482, 700, 828, 1030
FauI CCCGC 1 cut(s) 179
FblI GTMKAC 1 cut(s) 371
FokI GGATG 2 cut(s) 527, 704
FriOI GRGCYC 3 cut(s) 153, 402, 425
GlaI GCGC 7 cut(s) 124, 190, 250, 322, 381, 450, 469
GsaI CCCAGC 1 cut(s) 442
HaeII RGCGCY 3 cut(s) 192, 252, 324
HapII CCGG 5 cut(s) 143, 147, 167, 252, 638
HhaI GCGC 7 cut(s) 125, 191, 251, 323, 382, 451, 470
Hin1I GRCGYC 1 cut(s) 189
Hin1II CATG 4 cut(s) 486, 704, 832, 1034
Hin6I GCGC 7 cut(s) 123, 189, 249, 321, 380, 449, 468
HinP1I GCGC 7 cut(s) 123, 189, 249, 321, 380, 449, 468
HincII GTYRAC 1 cut(s) 372
HindII GTYRAC 1 cut(s) 372
HinfI GANTC 4 cut(s) 182, 209, 617, 1007
HpaII CCGG 5 cut(s) 143, 147, 167, 252, 638
HphI GGTGA 2 cut(s) 103, 955
Hpy166II GTNNAC 1 cut(s) 372
Hpy188I TCNGA 1 cut(s) 997
Hpy188III TCNNGA 5 cut(s) 238, 265, 509, 672, 685
Hpy8I GTNNAC 1 cut(s) 372
Hpy99I CGWCG 3 cut(s) 164, 275, 376
HpyAV CCTTC 7 cut(s) 103, 278, 358, 453, 710, 780, 917
HpyCH4IV ACGT 1 cut(s) 966
HpyCH4V TGCA 8 cut(s) 388, 744, 770, 799, 869, 898, 1027, 1034
HpyF3I CTNAG 2 cut(s) 417, 510
HpySE526I ACGT 1 cut(s) 966
Hsp92I GRCGYC 1 cut(s) 189
Hsp92II CATG 4 cut(s) 486, 704, 832, 1034
HspAI GCGC 7 cut(s) 123, 189, 249, 321, 380, 449, 468
KasI GGCGCC 1 cut(s) 188
KroI GCCGGC 1 cut(s) 251
KroNI GCCGGC 1 cut(s) 253
KspI CCGCGG 1 cut(s) 351
Kzo9I GATC 4 cut(s) 408, 668, 811, 997
LmnI GCTCC 5 cut(s) 30, 179, 201, 223, 267
Lsp1109I GCAGC 8 cut(s) 9, 28, 31, 267, 400, 892, 1011, 1039
LweI GCATC 5 cut(s) 505, 682, 757, 828, 936
MaeII ACGT 1 cut(s) 966
MalI GATC 4 cut(s) 410, 670, 813, 999
MbiI CCGCTC 1 cut(s) 174
MboI GATC 4 cut(s) 408, 668, 811, 997
MboII GAAGA 1 cut(s) 958
MflI RGATCY 1 cut(s) 668
MhlI GDGCHC 5 cut(s) 153, 228, 402, 425, 438
MlsI TGGCCA 1 cut(s) 819
MluCI AATT 2 cut(s) 491, 730
MluNI TGGCCA 1 cut(s) 819
Mly113I GGCGCC 1 cut(s) 189
MlyI GAGTC 1 cut(s) 1016
Mox20I TGGCCA 1 cut(s) 819
Mph1103I ATGCAT 1 cut(s) 746
MroNI GCCGGC 1 cut(s) 251
MscI TGGCCA 1 cut(s) 819
MseI TTAA 2 cut(s) 738, 864
MslI CAYNNNNRTG 2 cut(s) 231, 965
Msp20I TGGCCA 1 cut(s) 819
MspA1I CMGCKG 2 cut(s) 22, 350
MspI CCGG 5 cut(s) 143, 147, 167, 252, 638
MspR9I CCNGG 3 cut(s) 143, 148, 167
Mva1269I GAATGC 1 cut(s) 859
MvnI CGCG 4 cut(s) 123, 350, 449, 468
NaeI GCCGGC 1 cut(s) 253
NarI GGCGCC 1 cut(s) 189
NciI CCSGG 3 cut(s) 143, 148, 167
NdeII GATC 4 cut(s) 408, 668, 811, 997
NgoMIV GCCGGC 1 cut(s) 251
NlaIII CATG 4 cut(s) 486, 704, 832, 1034
NlaIV GGNNCC 6 cut(s) 151, 190, 423, 424, 636, 791
NmeAIII GCCGAG 2 cut(s) 21, 859
NotI GCGGCCGC 1 cut(s) 345
NsiI ATGCAT 1 cut(s) 746
NspI RCATGY 2 cut(s) 704, 1034
NspV TTCGAA 1 cut(s) 620
OliI CACNNNNGTG 2 cut(s) 231, 965
PaeI GCATGC 1 cut(s) 1034
PcsI WCGNNNNNNNCGW 3 cut(s) 270, 368, 626
PctI GAATGC 1 cut(s) 859
PdiI GCCGGC 1 cut(s) 253
PfeI GAWTC 3 cut(s) 182, 209, 617
PinAI ACCGGT 1 cut(s) 637
PleI GAGTC 1 cut(s) 1015
PluTI GGCGCC 1 cut(s) 192
PpsI GAGTC 1 cut(s) 1015
PpuMI RGGWCCY 1 cut(s) 789
Psp5II RGGWCCY 1 cut(s) 789
PspFI CCCAGC 1 cut(s) 438
PspN4I GGNNCC 6 cut(s) 151, 190, 423, 424, 636, 791
PspOMI GGGCCC 2 cut(s) 149, 421
PspPI GGNCC 9 cut(s) 149, 150, 169, 421, 422, 626, 635, 789, 883
PspPPI RGGWCCY 1 cut(s) 789
PstI CTGCAG 1 cut(s) 1029
PstNI CAGNNNCTG 1 cut(s) 22
PsuI RGATCY 1 cut(s) 668
PvuII CAGCTG 1 cut(s) 22
RsaI GTAC 2 cut(s) 298, 530
RsaNI GTAC 2 cut(s) 297, 529
RseI CAYNNNNRTG 2 cut(s) 231, 965
SacII CCGCGG 1 cut(s) 351
SalI GTCGAC 1 cut(s) 370
SaqAI TTAA 2 cut(s) 738, 864
Sau3AI GATC 4 cut(s) 408, 668, 811, 997
Sau96I GGNCC 9 cut(s) 149, 150, 169, 421, 422, 626, 635, 789, 883
SchI GAGTC 1 cut(s) 1016
ScrFI CCNGG 3 cut(s) 143, 148, 167
SduI GDGCHC 5 cut(s) 153, 228, 402, 425, 438
SfaNI GCATC 5 cut(s) 505, 682, 757, 828, 936
SfcI CTRYAG 2 cut(s) 427, 1025
SfoI GGCGCC 1 cut(s) 190
Sfr303I CCGCGG 1 cut(s) 351
SfuI TTCGAA 1 cut(s) 620
SgrBI CCGCGG 1 cut(s) 351
SinI GGWCC 3 cut(s) 626, 635, 789
SmiMI CAYNNNNRTG 2 cut(s) 231, 965
SphI GCATGC 1 cut(s) 1034
Sse9I AATT 2 cut(s) 491, 730
SspDI GGCGCC 1 cut(s) 188
StyD4I CCNGG 3 cut(s) 141, 146, 165
StyI CCWWGG 1 cut(s) 1019
TaiI ACGT 1 cut(s) 969
TaqI TCGA 2 cut(s) 371, 620
TaqII GACCGA 2 cut(s) 22, 643
TasI AATT 2 cut(s) 491, 730
TatI WGTACW 1 cut(s) 528
TauI GCSGC 7 cut(s) 137, 140, 326, 344, 347, 350, 353
TfiI GAWTC 3 cut(s) 182, 209, 617
Tru1I TTAA 2 cut(s) 738, 864
Tru9I TTAA 2 cut(s) 738, 864
TscAI CASTG 2 cut(s) 136, 421
TseI GCWGC 8 cut(s) 16, 19, 22, 255, 388, 905, 1024, 1027
TspGWI ACGGA 3 cut(s) 314, 389, 981
TspRI CASTG 2 cut(s) 136, 421
VpaK11BI GGWCC 3 cut(s) 626, 635, 789
XceI RCATGY 2 cut(s) 704, 1034
XmiI GTMKAC 1 cut(s) 371
Zsp2I ATGCAT 1 cut(s) 746
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.