Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0013583

Physical Location & Seq

Genomic Coordinates Forward (+)

11320992 .. 11322439

Gene Structure 1448 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1380 bp

ATGGGGCCGTACGGTTCCACCACCTGCTCCGGCGTCAGCAGCAGCGCCAGCTCCTCCTCCTCCTCCTCCGTCACTAAACCCCCCGCCGACATCGATGGCTGTTTGGCCGATGCCGGATACAAGGTCCGCTCCTCTGATCTGCGACACGTCGCCCAGCGCCTCGAGCGGCTTGAGACCGTCATGGTCAACTCCCCCGGCGACCTCTCCCACCTCGCCTCCGACGCCGTCCTCTACAACCCCTCCGACCTCGCCACCTGGGTCGACTCCCTCCTCACCGAGTTCAACCACCAGCCCCTCATCTCTCTCCCCTCAGATCTCGACTTCTCCGACGGCGCCGTCATCAATAATCCCGCCGCCCTCCCCCGCGAAACATGGACCGATAATTCCACCGTCATCGCCGCCGCGCCGCAGCAGACCCACAACCAGCTCACCGTCGTCACCGCCATGGAAGAAGATTCGGGGATTAGGCTGGTCCACTTGCTTGTCACGTGCGCCGAATCCGTCCAGCGTGGCGACCTAGCATTGGCCGGCTCCCTGATCGAGAACATGCAGGCTCTGTTGACACGTGTCAACACCAGCTGTGGCATCGGGAAGGTCGCCGGGTACTTCATCGACGCCCTCAGCCGCCGAATCTTCTCGCCGCAGACCGTCGGCTCGGCTTCCGGCTCGGTTCACGAGAATGAGCTTCTCTACCACTACTTCTACGAGGCCTGCCCCTATCTCAAATTCGCGCACTTCACCGCCAATCAGGCCATCCTGGAAGCATTCGACGGTCACGATTGCGTCCACGTCATCGACTTCAACTTAATGCACGGCCTCCAATGGCCAGCCCTTATTCAGGCGCTAGCACTCCGCCCCGGTGGGCCCCCCCTGCTTCGGTTGACCGGCATTGGACCGCCGTCCCCGGACGGGCGCGACTCGCTGAGAGAAATCGGCCTCCGACTCGCCGAGTTGGCCCGGTCCGTCAACGTCGGCTTCGCTTTCCGTGGCGTGGCGGCTTCGAGGCTCGAGGACGTGAAGCCGTGGATGCTCCAGGTGAGTCCGAAGGAGGCGGTGGCGGTGAATTCTATCATGCAGCTGCACCGGCTGCTCGGATCCGATACGAACCGGAATTCCCCAATCGAGATGGTGCTGTCCTGGATCGATCGGAACCTCAACCCGAAGATCGTGGCGGTTGTGGAGCAGGAAGCGGACCATAACAAACCCGGTTTTCTGGACCGGTTCACGGAGGCACTGTACTACTACTCGAACATGTTCGACTCGCTGGAGGCTTGCGCGATGCAGCCGGAGAAGGCTTTGGCGGAGATTTACATACAGAGGGAGATATGCAACGTTGTGTGCTGCGAAGGAGCCGCTCCACTTGGGGTCGAATGCGTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

DELLA GRAS

Protein Analysis

460

Amino Acids

49.78

Weight (kDa)

5.01

Isoelectric Point (pI)

44.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DELLA	PF12041	32 - 98	1.4e-30	Transcriptional regulator DELLA protein N terminal
GRAS	PF03514	157 - 451	8.6e-95	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013583)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g04080
malus_domestica	MD02G1039600.v1.1 MD15G1180500.v1.1
prunus_persica	Prupe.7G236100_v2.0.a1
pyrus_communis	pycom02g03290 pycom15g16190
rosa_chinensis	RchiOBHm_Chr2g0089571
rosa_laevigata	RLG00000016041
rosa_multiflora	Rmu_co8325249.1_g000001 Rmu_co8349301.1_g000001 Rmu_sc0006193.1_g000003
rosa_roxburghii	Rroxscaffold_2G00151810
rosa_rugosa	Rorug02G0001500
rosa_samantha	Rh2AG047000 Rh2BG045800 Rh2CG047600 Rh2DG047200
rosa_wichuraiana	Rw2G003570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	32
AasI	GACNNNNNNGTC	1 cut(s)	335
Acc36I	ACCTGC	1 cut(s)	32
AccB1I	GGYRCC	1 cut(s)	332
AccBSI	CCGCTC	3 cut(s)	129, 166, 1355
AccI	GTMKAC	1 cut(s)	261
AccII	CGCG	5 cut(s)	366, 404, 731, 915, 1277
AclI	AACGTT	1 cut(s)	1332
AclWI	GGATC	3 cut(s)	1089, 1102, 1148
AcoI	YGGCCR	3 cut(s)	105, 525, 824
AcsI	RAATTY	3 cut(s)	725, 1063, 1111
AcvI	CACGTG	2 cut(s)	489, 566
AcyI	GRCGYC	4 cut(s)	33, 222, 333, 615
AfaI	GTAC	3 cut(s)	11, 605, 1238
AfiI	CCNNNNNNNGG	6 cut(s)	523, 838, 876, 909, 991, 1225
AflIII	ACRYGT	4 cut(s)	145, 563, 565, 1251
AgeI	ACCGGT	1 cut(s)	1218
AgsI	TTSAA	2 cut(s)	283, 802
AjiI	CACGTC	3 cut(s)	148, 790, 1015
AjnI	CCWGG	4 cut(s)	254, 756, 1032, 1136
AloI	GAACNNNNNNTCC	2 cut(s)	1097, 1129
AluBI	AGCT	5 cut(s)	51, 427, 579, 685, 1078
AluI	AGCT	5 cut(s)	51, 427, 579, 685, 1078
Alw26I	GTCTC	1 cut(s)	167
AlwI	GGATC	3 cut(s)	1089, 1102, 1148
AlwNI	CAGNNNCTG	1 cut(s)	556
Ama87I	CYCGRG	2 cut(s)	161, 1007
ApaI	GGGCCC	1 cut(s)	867
ApeKI	GCWGC	8 cut(s)	39, 42, 409, 1075, 1078, 1087, 1282, 1341
ApoI	RAATTY	3 cut(s)	725, 1063, 1111
AsiGI	ACCGGT	1 cut(s)	1218
Asp700I	GAANNNNTTC	1 cut(s)	1253
AspLEI	GCGC	9 cut(s)	47, 159, 335, 406, 494, 733, 844, 915, 1277
AsuC2I	CCSGG	6 cut(s)	195, 601, 858, 905, 958, 1206
AsuHPI	GGTGA	6 cut(s)	265, 421, 430, 730, 1048, 1072
AsuNHI	GCTAGC	1 cut(s)	844
AvaI	CYCGRG	2 cut(s)	161, 1007
AvaII	GGWCC	7 cut(s)	124, 375, 472, 893, 960, 1192, 1216
BaeGI	GKGCMC	1 cut(s)	867
BalI	TGGCCA	1 cut(s)	826
BamHI	GGATCC	1 cut(s)	1094
BanI	GGYRCC	1 cut(s)	332
BanII	GRGCYC	1 cut(s)	867
BauI	CACGAG	1 cut(s)	674
BbrPI	CACGTG	2 cut(s)	489, 566
BbvCI	CCTCAGC	1 cut(s)	620
BbvI	GCAGC	8 cut(s)	51, 54, 421, 1065, 1074, 1087, 1294, 1328
BccI	CCATC	3 cut(s)	89, 761, 1120
BceAI	ACGGC	6 cut(s)	209, 320, 346, 829, 883, 1006
BciT130I	CCWGG	4 cut(s)	256, 758, 1034, 1138
BciVI	GTATCC	1 cut(s)	110
BcnI	CCSGG	6 cut(s)	195, 601, 858, 905, 958, 1206
BcoDI	GTCTC	1 cut(s)	167
BfaI	CTAG	2 cut(s)	518, 845
BfoI	RGCGCY	4 cut(s)	48, 160, 336, 845
BfuAI	ACCTGC	1 cut(s)	32
BfuI	GTATCC	1 cut(s)	110
BglI	GCCNNNNNGGC	2 cut(s)	749, 953
BglII	AGATCT	1 cut(s)	313
Bme18I	GGWCC	7 cut(s)	124, 375, 472, 893, 960, 1192, 1216
BmeT110I	CYCGRG	2 cut(s)	161, 1007
BmgBI	CACGTC	3 cut(s)	148, 790, 1015
BmiI	GGNNCC	9 cut(s)	6, 16, 334, 532, 865, 866, 1096, 1151, 1351
BmsI	GCATC	4 cut(s)	100, 594, 1017, 1269
BmtI	GCTAGC	1 cut(s)	848
BoxI	GACNNNNGTC	2 cut(s)	566, 898
BpmI	CTGGAG	2 cut(s)	1016, 1286
Bpu10I	CCTNAGC	1 cut(s)	620
BpuEI	CTTGAG	1 cut(s)	191
BpuMI	CCSGG	6 cut(s)	195, 601, 858, 905, 958, 1206
Bsa29I	ATCGAT	2 cut(s)	93, 1143
BsaAI	YACGTR	2 cut(s)	489, 566
BsaHI	GRCGYC	4 cut(s)	33, 222, 333, 615
BsaI	GGTCTC	1 cut(s)	167
BsaJI	CCNNGG	7 cut(s)	193, 255, 444, 856, 903, 985, 1022
BsaWI	WCCGGW	2 cut(s)	1107, 1218
BsaXI	ACNNNNNCTCC	6 cut(s)	200, 224, 230, 254, 1220, 1250
Bsc4I	CCNNNNNNNGG	6 cut(s)	523, 838, 876, 909, 991, 1225
Bse118I	RCCGGY	4 cut(s)	527, 884, 1083, 1218
BseBI	CCWGG	4 cut(s)	256, 758, 1034, 1138
BseCI	ATCGAT	2 cut(s)	93, 1143
BseDI	CCNNGG	7 cut(s)	193, 255, 444, 856, 903, 985, 1022
BseGI	GGATG	2 cut(s)	753, 1032
BseLI	CCNNNNNNNGG	6 cut(s)	523, 838, 876, 909, 991, 1225
BseMII	CTCAG	3 cut(s)	324, 634, 914
BseRI	GAGGAG	7 cut(s)	43, 46, 49, 52, 55, 121, 260
BseSI	GKGCMC	1 cut(s)	867
BseXI	GCAGC	8 cut(s)	51, 54, 421, 1065, 1074, 1087, 1294, 1328
BseYI	CCCAGC	1 cut(s)	153
BsgI	GTGCAG	1 cut(s)	1064
Bsh1236I	CGCG	5 cut(s)	366, 404, 731, 915, 1277
Bsh1285I	CGRYCG	1 cut(s)	1147
BshNI	GGYRCC	1 cut(s)	332
BshTI	ACCGGT	1 cut(s)	1218
BshVI	ATCGAT	2 cut(s)	93, 1143
BsiEI	CGRYCG	1 cut(s)	1147
BsiHKCI	CYCGRG	2 cut(s)	161, 1007
BsiWI	CGTACG	1 cut(s)	9
BslFI	GGGAC	1 cut(s)	886
BslI	CCNNNNNNNGG	6 cut(s)	523, 838, 876, 909, 991, 1225
BsmAI	GTCTC	1 cut(s)	167
BsmFI	GGGAC	1 cut(s)	886
BsmI	GAATGC	2 cut(s)	764, 1376
Bso31I	GGTCTC	1 cut(s)	167
BsoBI	CYCGRG	2 cut(s)	161, 1007
Bsp120I	GGGCCC	1 cut(s)	863
Bsp1286I	GDGCHC	1 cut(s)	867
Bsp143I	GATC	7 cut(s)	136, 313, 537, 1094, 1140, 1144, 1164
Bsp19I	CCATGG	1 cut(s)	444
BspCNI	CTCAG	3 cut(s)	323, 633, 915
BspDI	ATCGAT	2 cut(s)	93, 1143
BspFNI	CGCG	5 cut(s)	366, 404, 731, 915, 1277
BspLI	GGNNCC	9 cut(s)	6, 16, 334, 532, 865, 866, 1096, 1151, 1351
BspMI	ACCTGC	1 cut(s)	32
BspOI	GCTAGC	1 cut(s)	848
BspPI	GGATC	3 cut(s)	1089, 1102, 1148
BspT107I	GGYRCC	1 cut(s)	332
BspTNI	GGTCTC	1 cut(s)	167
BsrBI	CCGCTC	3 cut(s)	129, 166, 1355
BsrFI	RCCGGY	4 cut(s)	527, 884, 1083, 1218
BssAI	RCCGGY	4 cut(s)	527, 884, 1083, 1218
BssECI	CCNNGG	7 cut(s)	193, 255, 444, 856, 903, 985, 1022
BssMI	GATC	7 cut(s)	136, 313, 537, 1094, 1140, 1144, 1164
BssNI	GRCGYC	4 cut(s)	33, 222, 333, 615
BssSI	CACGAG	1 cut(s)	674
BssT1I	CCWWGG	1 cut(s)	444
Bst2BI	CACGAG	1 cut(s)	674
Bst2UI	CCWGG	4 cut(s)	256, 758, 1034, 1138
Bst4CI	ACNGT	7 cut(s)	14, 178, 391, 433, 649, 773, 1236
BstACI	GRCGYC	4 cut(s)	33, 222, 333, 615
BstAPI	GCANNNNNTGC	1 cut(s)	1087
BstBAI	YACGTR	2 cut(s)	489, 566
BstC8I	GCNNGC	7 cut(s)	49, 529, 552, 712, 828, 846, 1273
BstDEI	CTNAG	3 cut(s)	310, 620, 923
BstDSI	CCRYGG	3 cut(s)	444, 985, 1022
BstENI	CCTNNNNNAGG	1 cut(s)	836
BstF5I	GGATG	2 cut(s)	753, 1032
BstFNI	CGCG	5 cut(s)	366, 404, 731, 915, 1277
BstH2I	RGCGCY	4 cut(s)	48, 160, 336, 845
BstHHI	GCGC	9 cut(s)	47, 159, 335, 406, 494, 733, 844, 915, 1277
BstKTI	GATC	7 cut(s)	139, 316, 540, 1097, 1143, 1147, 1167
BstMAI	GTCTC	1 cut(s)	167
BstMBI	GATC	7 cut(s)	136, 313, 537, 1094, 1140, 1144, 1164
BstMCI	CGRYCG	1 cut(s)	1147
BstNI	CCWGG	4 cut(s)	256, 758, 1034, 1138
BstNSI	RCATGY	2 cut(s)	550, 1255
BstPAI	GACNNNNGTC	2 cut(s)	566, 898
BstSLI	GKGCMC	1 cut(s)	867
BstUI	CGCG	5 cut(s)	366, 404, 731, 915, 1277
BstV1I	GCAGC	8 cut(s)	51, 54, 421, 1065, 1074, 1087, 1294, 1328
BstX2I	RGATCY	2 cut(s)	313, 1094
BstYI	RGATCY	2 cut(s)	313, 1094
Bsu15I	ATCGAT	2 cut(s)	93, 1143
BsuI	GTATCC	1 cut(s)	110
BsuTUI	ATCGAT	2 cut(s)	93, 1143
BtgI	CCRYGG	3 cut(s)	444, 985, 1022
BtgZI	GCGATG	2 cut(s)	379, 1292
BtrI	CACGTC	3 cut(s)	148, 790, 1015
BtsCI	GGATG	2 cut(s)	753, 1032
BtsIMutI	CAGTG	1 cut(s)	1232
BveI	ACCTGC	1 cut(s)	32
Cac8I	GCNNGC	7 cut(s)	49, 529, 552, 712, 828, 846, 1273
CaiI	CAGNNNCTG	1 cut(s)	556
CfoI	GCGC	9 cut(s)	47, 159, 335, 406, 494, 733, 844, 915, 1277
Cfr10I	RCCGGY	4 cut(s)	527, 884, 1083, 1218
ClaI	ATCGAT	2 cut(s)	93, 1143
CpoI	CGGWCCG	1 cut(s)	960
CseI	GACGC	4 cut(s)	22, 230, 623, 772
Csp6I	GTAC	3 cut(s)	10, 604, 1237
CspAI	ACCGGT	1 cut(s)	1218
CspI	CGGWCCG	1 cut(s)	960
CviAII	CATG	6 cut(s)	181, 372, 445, 547, 1072, 1252
CviQI	GTAC	3 cut(s)	10, 604, 1237
DdeI	CTNAG	3 cut(s)	310, 620, 923
DinI	GGCGCC	1 cut(s)	334
DpnI	GATC	7 cut(s)	138, 315, 539, 1096, 1142, 1146, 1166
DpnII	GATC	7 cut(s)	136, 313, 537, 1094, 1140, 1144, 1164
DrdI	GACNNNNNNGTC	1 cut(s)	335
DseDI	GACNNNNNNGTC	1 cut(s)	335
EaeI	YGGCCR	3 cut(s)	105, 525, 824
EciI	GGCGGA	2 cut(s)	842, 1316
Eco130I	CCWWGG	1 cut(s)	444
Eco147I	AGGCCT	1 cut(s)	710
Eco24I	GRGCYC	1 cut(s)	867
Eco31I	GGTCTC	1 cut(s)	167
Eco47I	GGWCC	7 cut(s)	124, 375, 472, 893, 960, 1192, 1216
Eco72I	CACGTG	2 cut(s)	489, 566
Eco88I	CYCGRG	2 cut(s)	161, 1007
EcoNI	CCTNNNNNAGG	1 cut(s)	836
EcoO109I	RGGNCCY	1 cut(s)	864
EcoRI	GAATTC	2 cut(s)	1063, 1111
EcoRII	CCWGG	4 cut(s)	254, 756, 1032, 1136
EcoT14I	CCWWGG	1 cut(s)	444
EcoT38I	GRGCYC	1 cut(s)	867
EgeI	GGCGCC	1 cut(s)	334
EheI	GGCGCC	1 cut(s)	334
ErhI	CCWWGG	1 cut(s)	444
FaeI	CATG	6 cut(s)	184, 375, 448, 550, 1075, 1255
FaqI	GGGAC	1 cut(s)	886
FatI	CATG	6 cut(s)	180, 371, 444, 546, 1071, 1251
FauI	CCCGC	3 cut(s)	91, 358, 371
FblI	GTMKAC	1 cut(s)	261
FokI	GGATG	2 cut(s)	740, 1039
FriOI	GRGCYC	1 cut(s)	867
FspBI	CTAG	2 cut(s)	518, 845
GlaI	GCGC	9 cut(s)	46, 158, 334, 405, 493, 732, 843, 914, 1276
GsaI	CCCAGC	1 cut(s)	157
GsuI	CTGGAG	2 cut(s)	1016, 1286
HaeII	RGCGCY	4 cut(s)	48, 160, 336, 845
HgaI	GACGC	4 cut(s)	22, 230, 623, 772
HhaI	GCGC	9 cut(s)	47, 159, 335, 406, 494, 733, 844, 915, 1277
Hin1I	GRCGYC	4 cut(s)	33, 222, 333, 615
Hin1II	CATG	6 cut(s)	184, 375, 448, 550, 1075, 1255
Hin6I	GCGC	9 cut(s)	45, 157, 333, 404, 492, 731, 842, 913, 1275
HinP1I	GCGC	9 cut(s)	45, 157, 333, 404, 492, 731, 842, 913, 1275
HincII	GTYRAC	6 cut(s)	187, 262, 561, 571, 882, 967
HindII	GTYRAC	6 cut(s)	187, 262, 561, 571, 882, 967
HinfI	GANTC	8 cut(s)	263, 455, 497, 630, 917, 942, 1039, 1259
HphI	GGTGA	6 cut(s)	265, 421, 430, 730, 1048, 1072
Hpy188III	TCNNGA	7 cut(s)	317, 541, 589, 674, 776, 1123, 1214
Hpy99I	CGWCG	8 cut(s)	152, 224, 332, 437, 617, 653, 773, 974
HpyAV	CCTTC	4 cut(s)	586, 1039, 1285, 1340
HpyCH4III	ACNGT	7 cut(s)	14, 178, 391, 433, 649, 773, 1236
HpyCH4IV	ACGT	7 cut(s)	147, 488, 565, 789, 969, 1014, 1332
HpyCH4V	TGCA	6 cut(s)	550, 811, 1075, 1081, 1282, 1329
HpyF3I	CTNAG	3 cut(s)	310, 620, 923
HpySE526I	ACGT	7 cut(s)	147, 488, 565, 789, 969, 1014, 1332
Hsp92I	GRCGYC	4 cut(s)	33, 222, 333, 615
Hsp92II	CATG	6 cut(s)	184, 375, 448, 550, 1075, 1255
HspAI	GCGC	9 cut(s)	45, 157, 333, 404, 492, 731, 842, 913, 1275
KasI	GGCGCC	1 cut(s)	332
KroI	GCCGGC	1 cut(s)	527
KroNI	GCCGGC	1 cut(s)	529
Kzo9I	GATC	7 cut(s)	136, 313, 537, 1094, 1140, 1144, 1164
LmnI	GCTCC	8 cut(s)	32, 56, 134, 536, 1035, 1180, 1349, 1360
Lsp1109I	GCAGC	8 cut(s)	51, 54, 421, 1065, 1074, 1087, 1294, 1328
LweI	GCATC	4 cut(s)	100, 594, 1017, 1269
MaeI	CTAG	2 cut(s)	518, 845
MaeII	ACGT	7 cut(s)	147, 488, 565, 789, 969, 1014, 1332
MaeIII	GTNAC	4 cut(s)	70, 436, 484, 773
MalI	GATC	7 cut(s)	138, 315, 539, 1096, 1142, 1146, 1166
MbiI	CCGCTC	3 cut(s)	129, 166, 1355
MboI	GATC	7 cut(s)	136, 313, 537, 1094, 1140, 1144, 1164
MboII	GAAGA	4 cut(s)	461, 464, 625, 1174
MflI	RGATCY	2 cut(s)	313, 1094
MhlI	GDGCHC	1 cut(s)	867
MlsI	TGGCCA	1 cut(s)	826
MluCI	AATT	4 cut(s)	382, 725, 1063, 1111
MluNI	TGGCCA	1 cut(s)	826
Mly113I	GGCGCC	1 cut(s)	333
MlyI	GAGTC	5 cut(s)	257, 911, 936, 1048, 1253
MmeI	TCCRAC	4 cut(s)	243, 267, 351, 964
Mox20I	TGGCCA	1 cut(s)	826
MroNI	GCCGGC	1 cut(s)	527
MroXI	GAANNNNTTC	1 cut(s)	1253
MscI	TGGCCA	1 cut(s)	826
MseI	TTAA	1 cut(s)	806
MslI	CAYNNNNRTG	2 cut(s)	443, 678
Msp20I	TGGCCA	1 cut(s)	826
MspA1I	CMGCKG	2 cut(s)	579, 1078
Mva1269I	GAATGC	2 cut(s)	764, 1376
MvaI	CCWGG	4 cut(s)	256, 758, 1034, 1138
MvnI	CGCG	5 cut(s)	366, 404, 731, 915, 1277
NaeI	GCCGGC	1 cut(s)	529
NarI	GGCGCC	1 cut(s)	333
NciI	CCSGG	6 cut(s)	195, 601, 858, 905, 958, 1206
NcoI	CCATGG	1 cut(s)	444
NdeII	GATC	7 cut(s)	136, 313, 537, 1094, 1140, 1144, 1164
NgoMIV	GCCGGC	1 cut(s)	527
NheI	GCTAGC	1 cut(s)	844
NlaIII	CATG	6 cut(s)	184, 375, 448, 550, 1075, 1255
NlaIV	GGNNCC	9 cut(s)	6, 16, 334, 532, 865, 866, 1096, 1151, 1351
NmeAIII	GCCGAG	2 cut(s)	635, 973
NmuCI	GTSAC	4 cut(s)	70, 436, 484, 773
NspI	RCATGY	2 cut(s)	550, 1255
PaeR7I	CTCGAG	2 cut(s)	161, 1007
PaqCI	CACCTGC	1 cut(s)	32
PceI	AGGCCT	1 cut(s)	710
PciI	ACATGT	1 cut(s)	1251
PcsI	WCGNNNNNNNCGW	2 cut(s)	324, 774
PctI	GAATGC	2 cut(s)	764, 1376
PdiI	GCCGGC	1 cut(s)	529
PdmI	GAANNNNTTC	1 cut(s)	1253
PfeI	GAWTC	3 cut(s)	455, 497, 630
Pfl23II	CGTACG	1 cut(s)	9
PflFI	GACNNNGTC	1 cut(s)	224
PfoI	TCCNGGA	2 cut(s)	756, 1136
PinAI	ACCGGT	1 cut(s)	1218
Ple19I	CGATCG	1 cut(s)	1147
PleI	GAGTC	5 cut(s)	257, 911, 936, 1047, 1253
PluTI	GGCGCC	1 cut(s)	336
PmaCI	CACGTG	2 cut(s)	489, 566
PmlI	CACGTG	2 cut(s)	489, 566
PpsI	GAGTC	5 cut(s)	257, 911, 936, 1047, 1253
Ppu21I	YACGTR	2 cut(s)	489, 566
PscI	ACATGT	1 cut(s)	1251
PshAI	GACNNNNGTC	2 cut(s)	566, 898
Psp1406I	AACGTT	1 cut(s)	1332
Psp6I	CCWGG	4 cut(s)	254, 756, 1032, 1136
PspCI	CACGTG	2 cut(s)	489, 566
PspFI	CCCAGC	1 cut(s)	153
PspGI	CCWGG	4 cut(s)	254, 756, 1032, 1136
PspLI	CGTACG	1 cut(s)	9
PspN4I	GGNNCC	9 cut(s)	6, 16, 334, 532, 865, 866, 1096, 1151, 1351
PspOMI	GGGCCC	1 cut(s)	863
PspXI	VCTCGAGB	2 cut(s)	161, 1007
PstNI	CAGNNNCTG	1 cut(s)	556
PsuI	RGATCY	2 cut(s)	313, 1094
PsyI	GACNNNGTC	1 cut(s)	224
PvuI	CGATCG	1 cut(s)	1147
PvuII	CAGCTG	2 cut(s)	579, 1078
RsaI	GTAC	3 cut(s)	11, 605, 1238
RsaNI	GTAC	3 cut(s)	10, 604, 1237
RseI	CAYNNNNRTG	2 cut(s)	443, 678
Rsr2I	CGGWCCG	1 cut(s)	960
RsrII	CGGWCCG	1 cut(s)	960
SalI	GTCGAC	1 cut(s)	260
SaqAI	TTAA	1 cut(s)	806
Sau3AI	GATC	7 cut(s)	136, 313, 537, 1094, 1140, 1144, 1164
SchI	GAGTC	5 cut(s)	257, 911, 936, 1048, 1253
SduI	GDGCHC	1 cut(s)	867
SfaNI	GCATC	4 cut(s)	100, 594, 1017, 1269
SfoI	GGCGCC	1 cut(s)	334
Sfr274I	CTCGAG	2 cut(s)	161, 1007
SinI	GGWCC	7 cut(s)	124, 375, 472, 893, 960, 1192, 1216
SlaI	CTCGAG	2 cut(s)	161, 1007
SmiMI	CAYNNNNRTG	2 cut(s)	443, 678
SmlI	CTYRAG	3 cut(s)	161, 170, 1007
SmoI	CTYRAG	3 cut(s)	161, 170, 1007
Sse9I	AATT	4 cut(s)	382, 725, 1063, 1111
SseBI	AGGCCT	1 cut(s)	710
SspDI	GGCGCC	1 cut(s)	332
SspMI	CTAG	2 cut(s)	518, 845
StuI	AGGCCT	1 cut(s)	710
StyI	CCWWGG	1 cut(s)	444
TaaI	ACNGT	7 cut(s)	14, 178, 391, 433, 649, 773, 1236
TaiI	ACGT	7 cut(s)	150, 491, 568, 792, 972, 1017, 1335
TaqII	GACCGA	1 cut(s)	392
TasI	AATT	4 cut(s)	382, 725, 1063, 1111
TatI	WGTACW	1 cut(s)	1236
TauI	GCSGC	9 cut(s)	169, 356, 401, 404, 409, 627, 643, 998, 1355
TfiI	GAWTC	3 cut(s)	455, 497, 630
Tru1I	TTAA	1 cut(s)	806
Tru9I	TTAA	1 cut(s)	806
TscAI	CASTG	1 cut(s)	1239
TseFI	GTSAC	4 cut(s)	70, 436, 484, 773
TseI	GCWGC	8 cut(s)	39, 42, 409, 1075, 1078, 1087, 1282, 1341
Tsp45I	GTSAC	4 cut(s)	70, 436, 484, 773
TspDTI	ATGAA	1 cut(s)	598
TspGWI	ACGGA	5 cut(s)	58, 490, 952, 974, 1241
TspRI	CASTG	1 cut(s)	1239
Tth111I	GACNNNGTC	1 cut(s)	224
VpaK11BI	GGWCC	7 cut(s)	124, 375, 472, 893, 960, 1192, 1216
XagI	CCTNNNNNAGG	1 cut(s)	836
XapI	RAATTY	3 cut(s)	725, 1063, 1111
XceI	RCATGY	2 cut(s)	550, 1255
XhoI	CTCGAG	2 cut(s)	161, 1007
XmiI	GTMKAC	1 cut(s)	261
XmnI	GAANNNNTTC	1 cut(s)	1253
XspI	CTAG	2 cut(s)	518, 845

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.