pycom15g16440

protein ABIL5 isoform X1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0013584
Physical Location & Seq
Forward (+)
11525297 .. 11527538
2242 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 858 bp
ATGGAGGAGAAGATGCAGAACAACTCTAAACCCTCCTCGGAGCAAGATGCAGAAGCAGAGTCTAAGGACGTTCCAAACATGGAGGAGAAGATGCAGAACATCTCTAAACCCTCCTCAGGGCAAGATGCAGAAGCAAAGTCTAAGGACATTGGAAGCTTTCATAATTCTCTTCAGGAACTGAGAGACCTGCGCTCTCAACTTCACTATGCTGCAGACTACTGTGAATCAACCTTTTTGAACACCAAAGAAAAGAAAGTAGTGATGGAAAACACCAAAGAGTACATATGCAGAGCTGTGGTGACTGTTGTTGATCATCTCGGATGCGTCTCCGCCAACCTTAACAGCATCGTTTCCAAAACTAACGCATTTTCGGAGGCTGAGACTCGAATTGATTGCCTCAAACAAAGGATGTTCTTATGTGAACAATACACCCATAAGTTTGCTCTGCCTAGAGTCCGATGGAGGGAGATTATCCCGCGGCATAATGCACGTTTTTTATCTGCAGCTACCAGAGAAGCTGAGAAACCCAATGATACCAGAGAAGCTGAGAAATCCAATGAAGATTCGAGGGATATTCCTAGAAACCCAGCCTCTCATAAAACCACTGACAAGCAAGAATCTGACAGAGATGTAGCAATGCCGCTTTTGTTGTGCACATCGTCTCACAAACCGTCTTTGCCCAAGGGCGAAAACAATTCAGCTTTAGTGCCGGTTCATGATGGCCTCTCAATCCTGTCTAGGGGTCCAAACCTTACCTTTCACTTCCAGGAATCTCGGAAGATTAATGGACGCCTCAAGAAATCTGGGCACGGTAATGACATCTTGTCGCTCATCAGACGAGCCAAAAGAAGAGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

286

Amino Acids

32.33

Weight (kDa)

8.81

Isoelectric Point (pI)

53.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 195
AccII CGCG 1 cut(s) 478
AciI CCGC 4 cut(s) 330, 476, 478, 641
AcuI CTGAAG 1 cut(s) 155
AcyI GRCGYC 1 cut(s) 790
AfaI GTAC 1 cut(s) 281
AfiI CCNNNNNNNGG 4 cut(s) 116, 117, 463, 739
AgsI TTSAA 1 cut(s) 238
AhdI GACNNNNNGTC 1 cut(s) 823
AjnI CCWGG 1 cut(s) 765
AluBI AGCT 6 cut(s) 156, 293, 506, 518, 545, 701
AluI AGCT 6 cut(s) 156, 293, 506, 518, 545, 701
Alw21I GWGCWC 1 cut(s) 656
Alw26I GTCTC 4 cut(s) 177, 331, 374, 666
Alw44I GTGCAC 1 cut(s) 652
AlwNI CAGNNNCTG 1 cut(s) 178
AoxI GGCC 1 cut(s) 721
ApaLI GTGCAC 1 cut(s) 652
ApeKI GCWGC 2 cut(s) 209, 503
AseI ATTAAT 1 cut(s) 783
AspLEI GCGC 1 cut(s) 192
AspS9I GGNCC 1 cut(s) 743
AsuHPI GGTGA 1 cut(s) 310
AvaII GGWCC 1 cut(s) 743
AxyI CCTNAGG 1 cut(s) 115
BaeGI GKGCMC 2 cut(s) 656, 810
Bbv12I GWGCWC 1 cut(s) 656
BbvI GCAGC 2 cut(s) 196, 515
BccI CCATC 3 cut(s) 256, 453, 713
BcgI CGANNNNNNTGC 2 cut(s) 375, 409
BciT130I CCWGG 1 cut(s) 767
BclI TGATCA 1 cut(s) 310
BcoDI GTCTC 4 cut(s) 177, 331, 374, 666
BfaI CTAG 3 cut(s) 450, 579, 738
BfmI CTRYAG 2 cut(s) 210, 501
BfuAI ACCTGC 1 cut(s) 195
BisI GCNGC 4 cut(s) 210, 479, 504, 641
BlsI GCNGC 4 cut(s) 211, 480, 505, 642
Bme1390I CCNGG 1 cut(s) 767
Bme18I GGWCC 1 cut(s) 743
BmeRI GACNNNNNGTC 1 cut(s) 823
BmgT120I GGNCC 1 cut(s) 743
BmiI GGNNCC 1 cut(s) 744
BmrFI CCNGG 1 cut(s) 767
BmsI GCATC 6 cut(s) 3, 37, 81, 115, 311, 354
BpuEI CTTGAG 1 cut(s) 779
BsaHI GRCGYC 1 cut(s) 790
BsaI GGTCTC 1 cut(s) 177
BsaJI CCNNGG 3 cut(s) 36, 476, 681
Bsc4I CCNNNNNNNGG 4 cut(s) 116, 117, 463, 739
Bse118I RCCGGY 1 cut(s) 709
Bse21I CCTNAGG 1 cut(s) 115
Bse3DI GCAATG 1 cut(s) 642
BseBI CCWGG 1 cut(s) 767
BseDI CCNNGG 3 cut(s) 36, 476, 681
BseGI GGATG 2 cut(s) 326, 414
BseLI CCNNNNNNNGG 4 cut(s) 116, 117, 463, 739
BseMI GCAATG 1 cut(s) 642
BseMII CTCAG 5 cut(s) 129, 170, 369, 510, 537
BseRI GAGGAG 4 cut(s) 20, 25, 98, 103
BseSI GKGCMC 2 cut(s) 656, 810
BseXI GCAGC 2 cut(s) 196, 515
BseYI CCCAGC 1 cut(s) 586
Bsh1236I CGCG 1 cut(s) 478
BshFI GGCC 1 cut(s) 723
BsiHKAI GWGCWC 1 cut(s) 656
BsiSI CCGG 1 cut(s) 710
BslI CCNNNNNNNGG 4 cut(s) 116, 117, 463, 739
BsmAI GTCTC 4 cut(s) 177, 331, 374, 666
BsmBI CGTCTC 2 cut(s) 331, 666
BsnI GGCC 1 cut(s) 723
Bso31I GGTCTC 1 cut(s) 177
Bsp1286I GDGCHC 2 cut(s) 656, 810
Bsp143I GATC 1 cut(s) 310
BspACI CCGC 4 cut(s) 330, 476, 478, 641
BspANI GGCC 1 cut(s) 723
BspCNI CTCAG 5 cut(s) 128, 171, 370, 511, 538
BspFNI CGCG 1 cut(s) 478
BspHI TCATGA 1 cut(s) 715
BspLI GGNNCC 1 cut(s) 744
BspMAI CTGCAG 2 cut(s) 214, 505
BspMI ACCTGC 1 cut(s) 195
BspTNI GGTCTC 1 cut(s) 177
BsrDI GCAATG 1 cut(s) 642
BsrFI RCCGGY 1 cut(s) 709
BssAI RCCGGY 1 cut(s) 709
BssECI CCNNGG 3 cut(s) 36, 476, 681
BssMI GATC 1 cut(s) 310
BssNI GRCGYC 1 cut(s) 790
BssT1I CCWWGG 1 cut(s) 681
Bst2UI CCWGG 1 cut(s) 767
Bst4CI ACNGT 4 cut(s) 221, 304, 672, 812
Bst6I CTCTTC 2 cut(s) 174, 844
BstACI GRCGYC 1 cut(s) 790
BstDEI CTNAG 7 cut(s) 63, 115, 141, 179, 378, 519, 546
BstDSI CCRYGG 1 cut(s) 476
BstF5I GGATG 2 cut(s) 326, 414
BstFNI CGCG 1 cut(s) 478
BstHHI GCGC 1 cut(s) 192
BstKTI GATC 1 cut(s) 313
BstMAI GTCTC 4 cut(s) 177, 331, 374, 666
BstMBI GATC 1 cut(s) 310
BstNI CCWGG 1 cut(s) 767
BstSCI CCNGG 1 cut(s) 765
BstSFI CTRYAG 2 cut(s) 210, 501
BstSLI GKGCMC 2 cut(s) 656, 810
BstUI CGCG 1 cut(s) 478
BstV1I GCAGC 2 cut(s) 196, 515
Bsu36I CCTNAGG 1 cut(s) 115
BsuRI GGCC 1 cut(s) 723
BtgI CCRYGG 1 cut(s) 476
BtsCI GGATG 2 cut(s) 326, 414
BtsIMutI CAGTG 1 cut(s) 603
BveI ACCTGC 1 cut(s) 195
CaiI CAGNNNCTG 1 cut(s) 178
CciI TCATGA 1 cut(s) 715
CfoI GCGC 1 cut(s) 192
Cfr10I RCCGGY 1 cut(s) 709
Cfr13I GGNCC 1 cut(s) 743
Cfr42I CCGCGG 1 cut(s) 479
CseI GACGC 2 cut(s) 313, 798
Csp6I GTAC 1 cut(s) 280
CviAII CATG 2 cut(s) 79, 716
CviQI GTAC 1 cut(s) 280
DdeI CTNAG 7 cut(s) 63, 115, 141, 179, 378, 519, 546
DpnI GATC 1 cut(s) 312
DpnII GATC 1 cut(s) 310
DriI GACNNNNNGTC 1 cut(s) 823
Eam1104I CTCTTC 2 cut(s) 174, 844
Eam1105I GACNNNNNGTC 1 cut(s) 823
EarI CTCTTC 2 cut(s) 174, 844
EciI GGCGGA 1 cut(s) 319
Eco130I CCWWGG 1 cut(s) 681
Eco31I GGTCTC 1 cut(s) 177
Eco47I GGWCC 1 cut(s) 743
Eco57I CTGAAG 1 cut(s) 155
Eco81I CCTNAGG 1 cut(s) 115
EcoRII CCWGG 1 cut(s) 765
EcoT14I CCWWGG 1 cut(s) 681
ErhI CCWWGG 1 cut(s) 681
Esp3I CGTCTC 2 cut(s) 331, 666
FaeI CATG 2 cut(s) 82, 719
FatI CATG 2 cut(s) 78, 715
FauI CCCGC 1 cut(s) 483
FauNDI CATATG 1 cut(s) 284
FbaI TGATCA 1 cut(s) 310
Fnu4HI GCNGC 4 cut(s) 210, 479, 504, 641
FokI GGATG 2 cut(s) 333, 421
Fsp4HI GCNGC 4 cut(s) 210, 479, 504, 641
FspBI CTAG 3 cut(s) 450, 579, 738
GlaI GCGC 1 cut(s) 191
GluI GCNGC 4 cut(s) 210, 479, 504, 641
GsaI CCCAGC 1 cut(s) 590
HaeIII GGCC 1 cut(s) 723
HapII CCGG 1 cut(s) 710
HgaI GACGC 2 cut(s) 313, 798
HhaI GCGC 1 cut(s) 192
Hin1I GRCGYC 1 cut(s) 790
Hin1II CATG 2 cut(s) 82, 719
Hin6I GCGC 1 cut(s) 190
HinP1I GCGC 1 cut(s) 190
HindIII AAGCTT 1 cut(s) 154
HinfI GANTC 7 cut(s) 59, 224, 382, 453, 563, 617, 770
HpaII CCGG 1 cut(s) 710
HphI GGTGA 1 cut(s) 310
Hpy166II GTNNAC 2 cut(s) 422, 654
Hpy188I TCNGA 7 cut(s) 40, 320, 373, 458, 622, 777, 836
Hpy188III TCNNGA 3 cut(s) 173, 716, 796
Hpy8I GTNNAC 2 cut(s) 422, 654
HpyCH4III ACNGT 4 cut(s) 221, 304, 672, 812
HpyCH4IV ACGT 2 cut(s) 69, 490
HpyCH4V TGCA 9 cut(s) 16, 50, 94, 128, 212, 288, 488, 503, 654
HpyF3I CTNAG 7 cut(s) 63, 115, 141, 179, 378, 519, 546
HpySE526I ACGT 2 cut(s) 69, 490
Hsp92I GRCGYC 1 cut(s) 790
Hsp92II CATG 2 cut(s) 82, 719
HspAI GCGC 1 cut(s) 190
Ksp22I TGATCA 1 cut(s) 310
KspI CCGCGG 1 cut(s) 479
Kzo9I GATC 1 cut(s) 310
LmnI GCTCC 1 cut(s) 40
Lsp1109I GCAGC 2 cut(s) 196, 515
LweI GCATC 6 cut(s) 3, 37, 81, 115, 311, 354
MaeI CTAG 3 cut(s) 450, 579, 738
MaeII ACGT 2 cut(s) 69, 490
MaeIII GTNAC 1 cut(s) 298
MalI GATC 1 cut(s) 312
MboI GATC 1 cut(s) 310
MboII GAAGA 5 cut(s) 22, 100, 161, 572, 790
MhlI GDGCHC 2 cut(s) 656, 810
MluCI AATT 3 cut(s) 163, 387, 694
MlyI GAGTC 3 cut(s) 68, 376, 462
MseI TTAA 2 cut(s) 339, 783
MslI CAYNNNNRTG 1 cut(s) 813
MspA1I CMGCKG 1 cut(s) 478
MspI CCGG 1 cut(s) 710
MspR9I CCNGG 1 cut(s) 767
MvaI CCWGG 1 cut(s) 767
MvnI CGCG 1 cut(s) 478
NdeI CATATG 1 cut(s) 284
NdeII GATC 1 cut(s) 310
NlaIII CATG 2 cut(s) 82, 719
NlaIV GGNNCC 1 cut(s) 744
NmuCI GTSAC 1 cut(s) 298
PagI TCATGA 1 cut(s) 715
PfeI GAWTC 4 cut(s) 224, 563, 617, 770
PfoI TCCNGGA 1 cut(s) 765
PkrI GCNGC 4 cut(s) 211, 480, 505, 642
PleI GAGTC 3 cut(s) 67, 376, 461
PpsI GAGTC 3 cut(s) 67, 376, 461
PshBI ATTAAT 1 cut(s) 783
Psp6I CCWGG 1 cut(s) 765
PspFI CCCAGC 1 cut(s) 586
PspGI CCWGG 1 cut(s) 765
PspN4I GGNNCC 1 cut(s) 744
PspPI GGNCC 1 cut(s) 743
PstI CTGCAG 2 cut(s) 214, 505
PstNI CAGNNNCTG 1 cut(s) 178
RsaI GTAC 1 cut(s) 281
RsaNI GTAC 1 cut(s) 280
RseI CAYNNNNRTG 1 cut(s) 813
SacII CCGCGG 1 cut(s) 479
SaqAI TTAA 2 cut(s) 339, 783
SatI GCNGC 4 cut(s) 210, 479, 504, 641
Sau3AI GATC 1 cut(s) 310
Sau96I GGNCC 1 cut(s) 743
SchI GAGTC 3 cut(s) 68, 376, 462
ScrFI CCNGG 1 cut(s) 767
SduI GDGCHC 2 cut(s) 656, 810
SfaNI GCATC 6 cut(s) 3, 37, 81, 115, 311, 354
SfcI CTRYAG 2 cut(s) 210, 501
Sfr303I CCGCGG 1 cut(s) 479
SgrBI CCGCGG 1 cut(s) 479
SinI GGWCC 1 cut(s) 743
SmiMI CAYNNNNRTG 1 cut(s) 813
SmlI CTYRAG 1 cut(s) 794
SmoI CTYRAG 1 cut(s) 794
Sse9I AATT 3 cut(s) 163, 387, 694
SsiI CCGC 4 cut(s) 330, 476, 478, 641
SspMI CTAG 3 cut(s) 450, 579, 738
StyD4I CCNGG 1 cut(s) 765
StyI CCWWGG 1 cut(s) 681
TaaI ACNGT 4 cut(s) 221, 304, 672, 812
TaiI ACGT 2 cut(s) 72, 493
TaqI TCGA 2 cut(s) 385, 566
TasI AATT 3 cut(s) 163, 387, 694
TatI WGTACW 1 cut(s) 279
TauI GCSGC 2 cut(s) 481, 643
TfiI GAWTC 4 cut(s) 224, 563, 617, 770
Tru1I TTAA 2 cut(s) 339, 783
Tru9I TTAA 2 cut(s) 339, 783
TscAI CASTG 1 cut(s) 610
TseFI GTSAC 1 cut(s) 298
TseI GCWGC 2 cut(s) 209, 503
Tsp45I GTSAC 1 cut(s) 298
TspDTI ATGAA 3 cut(s) 149, 573, 704
TspRI CASTG 1 cut(s) 610
VneI GTGCAC 1 cut(s) 652
VpaK11BI GGWCC 1 cut(s) 743
VspI ATTAAT 1 cut(s) 783
XspI CTAG 3 cut(s) 450, 579, 738
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.