Ankyrin repeats (many copies)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G24530 AT3G24530 AT3G24530 |
| fragaria_vesca | FvH4_1g04710 |
| malus_domestica | MD02G1046000.v1.1 MD15G1184200.v1.1 |
| prunus_persica | Prupe.7G232000_v2.0.a1 Prupe.7G232000_v2.0.a1 |
| pyrus_communis | pycom02g03840 pycom02g03850 pycom15g16580 |
| rosa_chinensis | RchiOBHm_Chr2g0090311 |
| rosa_laevigata | RLG00000016097 |
| rosa_multiflora | Rmu_co8096142.1_g000001 Rmu_sc0006235.1_g000004 |
| rosa_roxburghii | Rroxscaffold_2G00151290 |
| rosa_rugosa | Rorug02G0006500 |
| rosa_samantha | Rh2CG053200 Rh2DG052300 |
| rosa_wichuraiana | Rw2G004450 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 9 |
| AccI | GTMKAC | 1 cut(s) | 1105 |
| AciI | CCGC | 3 cut(s) | 33, 514, 728 |
| AclWI | GGATC | 3 cut(s) | 24, 1156, 1169 |
| AcsI | RAATTY | 4 cut(s) | 194, 783, 813, 866 |
| AcuI | CTGAAG | 2 cut(s) | 417, 1128 |
| AcyI | GRCGYC | 1 cut(s) | 10 |
| AfaI | GTAC | 5 cut(s) | 251, 383, 431, 648, 843 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 761, 894 |
| AflIII | ACRYGT | 3 cut(s) | 246, 1075, 1108 |
| AgsI | TTSAA | 4 cut(s) | 566, 605, 1089, 1126 |
| AjiI | CACGTC | 1 cut(s) | 1109 |
| AjnI | CCWGG | 2 cut(s) | 35, 754 |
| AluBI | AGCT | 7 cut(s) | 94, 395, 587, 640, 779, 944, 1200 |
| AluI | AGCT | 7 cut(s) | 94, 395, 587, 640, 779, 944, 1200 |
| Alw21I | GWGCWC | 1 cut(s) | 642 |
| Alw26I | GTCTC | 2 cut(s) | 718, 1262 |
| AlwI | GGATC | 3 cut(s) | 24, 1156, 1169 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 94 |
| AoxI | GGCC | 5 cut(s) | 38, 215, 493, 696, 1417 |
| ApeKI | GCWGC | 3 cut(s) | 94, 275, 299 |
| ApoI | RAATTY | 4 cut(s) | 194, 783, 813, 866 |
| AspLEI | GCGC | 1 cut(s) | 12 |
| AspS9I | GGNCC | 6 cut(s) | 39, 215, 493, 697, 849, 884 |
| AsuC2I | CCSGG | 1 cut(s) | 219 |
| AsuHPI | GGTGA | 2 cut(s) | 233, 1387 |
| AsuII | TTCGAA | 1 cut(s) | 1261 |
| AvaII | GGWCC | 2 cut(s) | 849, 884 |
| BamHI | GGATCC | 1 cut(s) | 1161 |
| BanI | GGYRCC | 1 cut(s) | 9 |
| BanII | GRGCYC | 1 cut(s) | 642 |
| BbsI | GAAGAC | 1 cut(s) | 1155 |
| Bbv12I | GWGCWC | 1 cut(s) | 642 |
| BbvI | GCAGC | 3 cut(s) | 81, 286, 287 |
| BccI | CCATC | 3 cut(s) | 56, 118, 586 |
| BceAI | ACGGC | 3 cut(s) | 70, 119, 480 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 113, 147 |
| BciT130I | CCWGG | 2 cut(s) | 37, 756 |
| BciVI | GTATCC | 1 cut(s) | 1306 |
| BcnI | CCSGG | 1 cut(s) | 219 |
| BcoDI | GTCTC | 2 cut(s) | 718, 1262 |
| BfaI | CTAG | 5 cut(s) | 425, 894, 1154, 1332, 1400 |
| BfoI | RGCGCY | 1 cut(s) | 13 |
| BfuI | GTATCC | 1 cut(s) | 1306 |
| BglII | AGATCT | 1 cut(s) | 1252 |
| BisI | GCNGC | 3 cut(s) | 95, 276, 300 |
| BlsI | GCNGC | 3 cut(s) | 96, 277, 301 |
| Bme1390I | CCNGG | 3 cut(s) | 37, 219, 756 |
| Bme18I | GGWCC | 2 cut(s) | 849, 884 |
| BmgBI | CACGTC | 1 cut(s) | 1109 |
| BmgT120I | GGNCC | 6 cut(s) | 39, 215, 493, 697, 849, 884 |
| BmiI | GGNNCC | 3 cut(s) | 11, 886, 1163 |
| BmrFI | CCNGG | 3 cut(s) | 37, 219, 756 |
| BmsI | GCATC | 4 cut(s) | 278, 286, 663, 1167 |
| BpiI | GAAGAC | 1 cut(s) | 1155 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 715, 747 |
| Bpu10I | CCTNAGC | 1 cut(s) | 450 |
| Bpu14I | TTCGAA | 1 cut(s) | 1261 |
| BpuEI | CTTGAG | 1 cut(s) | 626 |
| BpuMI | CCSGG | 1 cut(s) | 219 |
| BsaHI | GRCGYC | 1 cut(s) | 10 |
| BsaI | GGTCTC | 1 cut(s) | 718 |
| BsaJI | CCNNGG | 5 cut(s) | 52, 319, 339, 700, 771 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1187, 1217, 1293, 1323 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 761, 894 |
| Bse1I | ACTGG | 2 cut(s) | 766, 886 |
| Bse3DI | GCAATG | 2 cut(s) | 263, 298 |
| BseBI | CCWGG | 2 cut(s) | 37, 756 |
| BseDI | CCNNGG | 5 cut(s) | 52, 319, 339, 700, 771 |
| BseGI | GGATG | 5 cut(s) | 48, 293, 601, 678, 688 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 761, 894 |
| BseMI | GCAATG | 2 cut(s) | 263, 298 |
| BseMII | CTCAG | 1 cut(s) | 77 |
| BseNI | ACTGG | 2 cut(s) | 766, 886 |
| BseRI | GAGGAG | 3 cut(s) | 562, 736, 1208 |
| BseXI | GCAGC | 3 cut(s) | 81, 286, 287 |
| BsgI | GTGCAG | 2 cut(s) | 285, 1252 |
| Bsh1285I | CGRYCG | 1 cut(s) | 26 |
| BshFI | GGCC | 5 cut(s) | 40, 217, 495, 698, 1419 |
| BshNI | GGYRCC | 1 cut(s) | 9 |
| BsiEI | CGRYCG | 1 cut(s) | 26 |
| BsiHKAI | GWGCWC | 1 cut(s) | 642 |
| BsiSI | CCGG | 2 cut(s) | 69, 218 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 761, 894 |
| BsmAI | GTCTC | 2 cut(s) | 718, 1262 |
| BsmI | GAATGC | 1 cut(s) | 1333 |
| BsnI | GGCC | 5 cut(s) | 40, 217, 495, 698, 1419 |
| Bso31I | GGTCTC | 1 cut(s) | 718 |
| Bsp119I | TTCGAA | 1 cut(s) | 1261 |
| Bsp1286I | GDGCHC | 1 cut(s) | 642 |
| Bsp143I | GATC | 5 cut(s) | 16, 29, 1008, 1161, 1252 |
| Bsp19I | CCATGG | 2 cut(s) | 319, 771 |
| BspACI | CCGC | 3 cut(s) | 33, 514, 728 |
| BspANI | GGCC | 5 cut(s) | 40, 217, 495, 698, 1419 |
| BspCNI | CTCAG | 1 cut(s) | 76 |
| BspLI | GGNNCC | 3 cut(s) | 11, 886, 1163 |
| BspPI | GGATC | 3 cut(s) | 24, 1156, 1169 |
| BspQI | GCTCTTC | 1 cut(s) | 534 |
| BspT104I | TTCGAA | 1 cut(s) | 1261 |
| BspT107I | GGYRCC | 1 cut(s) | 9 |
| BspTNI | GGTCTC | 1 cut(s) | 718 |
| BsrDI | GCAATG | 2 cut(s) | 263, 298 |
| BsrI | ACTGG | 2 cut(s) | 766, 886 |
| BssECI | CCNNGG | 5 cut(s) | 52, 319, 339, 700, 771 |
| BssMI | GATC | 5 cut(s) | 16, 29, 1008, 1161, 1252 |
| BssNI | GRCGYC | 1 cut(s) | 10 |
| BssT1I | CCWWGG | 4 cut(s) | 319, 339, 700, 771 |
| Bst2UI | CCWGG | 2 cut(s) | 37, 756 |
| Bst4CI | ACNGT | 5 cut(s) | 24, 306, 412, 528, 1437 |
| Bst6I | CTCTTC | 6 cut(s) | 120, 393, 534, 999, 1231, 1258 |
| BstACI | GRCGYC | 1 cut(s) | 10 |
| BstBI | TTCGAA | 1 cut(s) | 1261 |
| BstC8I | GCNNGC | 2 cut(s) | 571, 1417 |
| BstDEI | CTNAG | 5 cut(s) | 63, 450, 489, 588, 1385 |
| BstDSI | CCRYGG | 3 cut(s) | 52, 319, 771 |
| BstF5I | GGATG | 5 cut(s) | 48, 293, 601, 678, 688 |
| BstH2I | RGCGCY | 1 cut(s) | 13 |
| BstHHI | GCGC | 1 cut(s) | 12 |
| BstKTI | GATC | 5 cut(s) | 19, 32, 1011, 1164, 1255 |
| BstMAI | GTCTC | 2 cut(s) | 718, 1262 |
| BstMBI | GATC | 5 cut(s) | 16, 29, 1008, 1161, 1252 |
| BstMCI | CGRYCG | 1 cut(s) | 26 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 566 |
| BstNI | CCWGG | 2 cut(s) | 37, 756 |
| BstNSI | RCATGY | 2 cut(s) | 250, 573 |
| BstSCI | CCNGG | 3 cut(s) | 35, 217, 754 |
| BstV1I | GCAGC | 3 cut(s) | 81, 286, 287 |
| BstV2I | GAAGAC | 1 cut(s) | 1155 |
| BstX2I | RGATCY | 3 cut(s) | 29, 1161, 1252 |
| BstYI | RGATCY | 3 cut(s) | 29, 1161, 1252 |
| BsuI | GTATCC | 1 cut(s) | 1306 |
| BsuRI | GGCC | 5 cut(s) | 40, 217, 495, 698, 1419 |
| BtgI | CCRYGG | 3 cut(s) | 52, 319, 771 |
| BtrI | CACGTC | 1 cut(s) | 1109 |
| BtsCI | GGATG | 5 cut(s) | 48, 293, 601, 678, 688 |
| BtsI | GCAGTG | 3 cut(s) | 451, 580, 1289 |
| BtsIMutI | CAGTG | 5 cut(s) | 451, 533, 580, 879, 1289 |
| Cac8I | GCNNGC | 2 cut(s) | 571, 1417 |
| CaiI | CAGNNNCTG | 1 cut(s) | 94 |
| CfoI | GCGC | 1 cut(s) | 12 |
| Cfr13I | GGNCC | 6 cut(s) | 39, 215, 493, 697, 849, 884 |
| CseI | GACGC | 1 cut(s) | 920 |
| Csp6I | GTAC | 5 cut(s) | 250, 382, 430, 647, 842 |
| CviQI | GTAC | 5 cut(s) | 250, 382, 430, 647, 842 |
| DdeI | CTNAG | 5 cut(s) | 63, 450, 489, 588, 1385 |
| DinI | GGCGCC | 1 cut(s) | 11 |
| DpnI | GATC | 5 cut(s) | 18, 31, 1010, 1163, 1254 |
| DpnII | GATC | 5 cut(s) | 16, 29, 1008, 1161, 1252 |
| Eam1104I | CTCTTC | 6 cut(s) | 120, 393, 534, 999, 1231, 1258 |
| EarI | CTCTTC | 6 cut(s) | 120, 393, 534, 999, 1231, 1258 |
| EciI | GGCGGA | 1 cut(s) | 22 |
| Ecl136II | GAGCTC | 1 cut(s) | 640 |
| Eco130I | CCWWGG | 4 cut(s) | 319, 339, 700, 771 |
| Eco147I | AGGCCT | 1 cut(s) | 1419 |
| Eco24I | GRGCYC | 1 cut(s) | 642 |
| Eco31I | GGTCTC | 1 cut(s) | 718 |
| Eco47I | GGWCC | 2 cut(s) | 849, 884 |
| Eco53kI | GAGCTC | 1 cut(s) | 640 |
| Eco57I | CTGAAG | 2 cut(s) | 417, 1128 |
| EcoICRI | GAGCTC | 1 cut(s) | 640 |
| EcoO109I | RGGNCCY | 1 cut(s) | 697 |
| EcoRI | GAATTC | 3 cut(s) | 783, 813, 866 |
| EcoRII | CCWGG | 2 cut(s) | 35, 754 |
| EcoT14I | CCWWGG | 4 cut(s) | 319, 339, 700, 771 |
| EcoT22I | ATGCAT | 1 cut(s) | 1182 |
| EcoT38I | GRGCYC | 1 cut(s) | 642 |
| EgeI | GGCGCC | 1 cut(s) | 11 |
| EheI | GGCGCC | 1 cut(s) | 11 |
| ErhI | CCWWGG | 4 cut(s) | 319, 339, 700, 771 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1404, 1436 |
| FauI | CCCGC | 1 cut(s) | 507 |
| FauNDI | CATATG | 2 cut(s) | 735, 804 |
| FblI | GTMKAC | 1 cut(s) | 1105 |
| Fnu4HI | GCNGC | 3 cut(s) | 95, 276, 300 |
| FokI | GGATG | 5 cut(s) | 35, 300, 608, 685, 695 |
| FriOI | GRGCYC | 1 cut(s) | 642 |
| Fsp4HI | GCNGC | 3 cut(s) | 95, 276, 300 |
| FspBI | CTAG | 5 cut(s) | 425, 894, 1154, 1332, 1400 |
| GlaI | GCGC | 1 cut(s) | 11 |
| GluI | GCNGC | 3 cut(s) | 95, 276, 300 |
| HaeII | RGCGCY | 1 cut(s) | 13 |
| HaeIII | GGCC | 5 cut(s) | 40, 217, 495, 698, 1419 |
| HapII | CCGG | 2 cut(s) | 69, 218 |
| HgaI | GACGC | 1 cut(s) | 920 |
| HhaI | GCGC | 1 cut(s) | 12 |
| Hin1I | GRCGYC | 1 cut(s) | 10 |
| Hin6I | GCGC | 1 cut(s) | 10 |
| HinP1I | GCGC | 1 cut(s) | 10 |
| HincII | GTYRAC | 1 cut(s) | 1106 |
| HindII | GTYRAC | 1 cut(s) | 1106 |
| HindIII | AAGCTT | 1 cut(s) | 942 |
| HinfI | GANTC | 3 cut(s) | 469, 924, 1258 |
| HpaII | CCGG | 2 cut(s) | 69, 218 |
| HphI | GGTGA | 2 cut(s) | 233, 1387 |
| Hpy166II | GTNNAC | 1 cut(s) | 1106 |
| Hpy188I | TCNGA | 3 cut(s) | 1147, 1188, 1257 |
| Hpy188III | TCNNGA | 5 cut(s) | 27, 88, 101, 203, 1174 |
| Hpy8I | GTNNAC | 1 cut(s) | 1106 |
| Hpy99I | CGWCG | 1 cut(s) | 1110 |
| HpyAV | CCTTC | 5 cut(s) | 86, 209, 961, 1088, 1430 |
| HpyCH4III | ACNGT | 5 cut(s) | 24, 306, 412, 528, 1437 |
| HpyCH4IV | ACGT | 2 cut(s) | 1075, 1108 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 566 |
| HpyF3I | CTNAG | 5 cut(s) | 63, 450, 489, 588, 1385 |
| HpySE526I | ACGT | 2 cut(s) | 1075, 1108 |
| Hsp92I | GRCGYC | 1 cut(s) | 10 |
| HspAI | GCGC | 1 cut(s) | 10 |
| KasI | GGCGCC | 1 cut(s) | 9 |
| Kzo9I | GATC | 5 cut(s) | 16, 29, 1008, 1161, 1252 |
| LguI | GCTCTTC | 1 cut(s) | 534 |
| Lsp1109I | GCAGC | 3 cut(s) | 81, 286, 287 |
| LweI | GCATC | 4 cut(s) | 278, 286, 663, 1167 |
| MaeI | CTAG | 5 cut(s) | 425, 894, 1154, 1332, 1400 |
| MaeII | ACGT | 2 cut(s) | 1075, 1108 |
| MaeIII | GTNAC | 7 cut(s) | 170, 832, 875, 1111, 1133, 1218, 1431 |
| MalI | GATC | 5 cut(s) | 18, 31, 1010, 1163, 1254 |
| MboI | GATC | 5 cut(s) | 16, 29, 1008, 1161, 1252 |
| MboII | GAAGA | 9 cut(s) | 107, 410, 551, 804, 913, 1016, 1160, 1218, 1275 |
| MfeI | CAATTG | 1 cut(s) | 561 |
| MflI | RGATCY | 3 cut(s) | 29, 1161, 1252 |
| MhlI | GDGCHC | 1 cut(s) | 642 |
| MluCI | AATT | 7 cut(s) | 194, 561, 783, 813, 866, 1080, 1126 |
| Mly113I | GGCGCC | 1 cut(s) | 10 |
| MlyI | GAGTC | 1 cut(s) | 463 |
| MmeI | TCCRAC | 1 cut(s) | 213 |
| Mph1103I | ATGCAT | 1 cut(s) | 1182 |
| MseI | TTAA | 2 cut(s) | 192, 906 |
| MspA1I | CMGCKG | 1 cut(s) | 395 |
| MspI | CCGG | 2 cut(s) | 69, 218 |
| MspR9I | CCNGG | 3 cut(s) | 37, 219, 756 |
| MunI | CAATTG | 1 cut(s) | 561 |
| Mva1269I | GAATGC | 1 cut(s) | 1333 |
| MvaI | CCWGG | 2 cut(s) | 37, 756 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 566 |
| NarI | GGCGCC | 1 cut(s) | 10 |
| NciI | CCSGG | 1 cut(s) | 219 |
| NcoI | CCATGG | 2 cut(s) | 319, 771 |
| NdeI | CATATG | 2 cut(s) | 735, 804 |
| NdeII | GATC | 5 cut(s) | 16, 29, 1008, 1161, 1252 |
| NlaIV | GGNNCC | 3 cut(s) | 11, 886, 1163 |
| NmuCI | GTSAC | 4 cut(s) | 875, 1111, 1133, 1431 |
| NsiI | ATGCAT | 1 cut(s) | 1182 |
| NspI | RCATGY | 2 cut(s) | 250, 573 |
| NspV | TTCGAA | 1 cut(s) | 1261 |
| PaeI | GCATGC | 1 cut(s) | 573 |
| PceI | AGGCCT | 1 cut(s) | 1419 |
| PciI | ACATGT | 1 cut(s) | 246 |
| PciSI | GCTCTTC | 1 cut(s) | 534 |
| PctI | GAATGC | 1 cut(s) | 1333 |
| PfeI | GAWTC | 2 cut(s) | 924, 1258 |
| PfoI | TCCNGGA | 1 cut(s) | 754 |
| PkrI | GCNGC | 3 cut(s) | 96, 277, 301 |
| PleI | GAGTC | 1 cut(s) | 463 |
| PluTI | GGCGCC | 1 cut(s) | 13 |
| PpsI | GAGTC | 1 cut(s) | 463 |
| PscI | ACATGT | 1 cut(s) | 246 |
| Psp124BI | GAGCTC | 1 cut(s) | 642 |
| Psp6I | CCWGG | 2 cut(s) | 35, 754 |
| PspGI | CCWGG | 2 cut(s) | 35, 754 |
| PspN4I | GGNNCC | 3 cut(s) | 11, 886, 1163 |
| PspPI | GGNCC | 6 cut(s) | 39, 215, 493, 697, 849, 884 |
| PstNI | CAGNNNCTG | 1 cut(s) | 94 |
| PsuI | RGATCY | 3 cut(s) | 29, 1161, 1252 |
| PvuII | CAGCTG | 1 cut(s) | 395 |
| RsaI | GTAC | 5 cut(s) | 251, 383, 431, 648, 843 |
| RsaNI | GTAC | 5 cut(s) | 250, 382, 430, 647, 842 |
| SacI | GAGCTC | 1 cut(s) | 642 |
| SalI | GTCGAC | 1 cut(s) | 1104 |
| SapI | GCTCTTC | 1 cut(s) | 534 |
| SaqAI | TTAA | 2 cut(s) | 192, 906 |
| SatI | GCNGC | 3 cut(s) | 95, 276, 300 |
| Sau3AI | GATC | 5 cut(s) | 16, 29, 1008, 1161, 1252 |
| Sau96I | GGNCC | 6 cut(s) | 39, 215, 493, 697, 849, 884 |
| SchI | GAGTC | 1 cut(s) | 463 |
| ScrFI | CCNGG | 3 cut(s) | 37, 219, 756 |
| SduI | GDGCHC | 1 cut(s) | 642 |
| SfaNI | GCATC | 4 cut(s) | 278, 286, 663, 1167 |
| SfoI | GGCGCC | 1 cut(s) | 11 |
| SfuI | TTCGAA | 1 cut(s) | 1261 |
| SinI | GGWCC | 2 cut(s) | 849, 884 |
| SmlI | CTYRAG | 1 cut(s) | 641 |
| SmoI | CTYRAG | 1 cut(s) | 641 |
| SphI | GCATGC | 1 cut(s) | 573 |
| Sse9I | AATT | 7 cut(s) | 194, 561, 783, 813, 866, 1080, 1126 |
| SseBI | AGGCCT | 1 cut(s) | 1419 |
| SsiI | CCGC | 3 cut(s) | 33, 514, 728 |
| SspDI | GGCGCC | 1 cut(s) | 9 |
| SspI | AATATT | 1 cut(s) | 622 |
| SspMI | CTAG | 5 cut(s) | 425, 894, 1154, 1332, 1400 |
| SstI | GAGCTC | 1 cut(s) | 642 |
| StuI | AGGCCT | 1 cut(s) | 1419 |
| StyD4I | CCNGG | 3 cut(s) | 35, 217, 754 |
| StyI | CCWWGG | 4 cut(s) | 319, 339, 700, 771 |
| TaaI | ACNGT | 5 cut(s) | 24, 306, 412, 528, 1437 |
| TaiI | ACGT | 2 cut(s) | 1078, 1111 |
| TaqI | TCGA | 7 cut(s) | 26, 333, 781, 949, 1105, 1261, 1356 |
| TaqII | GACCGA | 1 cut(s) | 866 |
| TasI | AATT | 7 cut(s) | 194, 561, 783, 813, 866, 1080, 1126 |
| TatI | WGTACW | 2 cut(s) | 429, 841 |
| TfiI | GAWTC | 2 cut(s) | 924, 1258 |
| Tru1I | TTAA | 2 cut(s) | 192, 906 |
| Tru9I | TTAA | 2 cut(s) | 192, 906 |
| TscAI | CASTG | 5 cut(s) | 451, 533, 580, 886, 1289 |
| TseFI | GTSAC | 4 cut(s) | 875, 1111, 1133, 1431 |
| TseI | GCWGC | 3 cut(s) | 94, 275, 299 |
| Tsp45I | GTSAC | 4 cut(s) | 875, 1111, 1133, 1431 |
| TspDTI | ATGAA | 8 cut(s) | 146, 519, 552, 612, 954, 1085, 1107, 1310 |
| TspGWI | ACGGA | 2 cut(s) | 267, 670 |
| TspRI | CASTG | 5 cut(s) | 451, 533, 580, 886, 1289 |
| VpaK11BI | GGWCC | 2 cut(s) | 849, 884 |
| XapI | RAATTY | 4 cut(s) | 194, 783, 813, 866 |
| XceI | RCATGY | 2 cut(s) | 250, 573 |
| XmiI | GTMKAC | 1 cut(s) | 1105 |
| XspI | CTAG | 5 cut(s) | 425, 894, 1154, 1332, 1400 |
| Zsp2I | ATGCAT | 1 cut(s) | 1182 |