Ankyrin repeats (many copies)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G24530 AT3G24530 AT3G24530 |
| fragaria_vesca | FvH4_1g04710 |
| malus_domestica | MD02G1046000.v1.1 MD15G1184200.v1.1 |
| prunus_persica | Prupe.7G232000_v2.0.a1 Prupe.7G232000_v2.0.a1 |
| pyrus_communis | pycom02g03840 pycom02g03850 pycom15g16580 |
| rosa_chinensis | RchiOBHm_Chr2g0090311 |
| rosa_laevigata | RLG00000016097 |
| rosa_multiflora | Rmu_co8096142.1_g000001 Rmu_sc0006235.1_g000004 |
| rosa_roxburghii | Rroxscaffold_2G00151290 |
| rosa_rugosa | Rorug02G0006500 |
| rosa_samantha | Rh2CG053200 Rh2DG052300 |
| rosa_wichuraiana | Rw2G004450 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 2 cut(s) | 21, 436 |
| AcuI | CTGAAG | 3 cut(s) | 220, 264, 503 |
| AflIII | ACRYGT | 2 cut(s) | 172, 205 |
| AgsI | TTSAA | 2 cut(s) | 223, 359 |
| AjiI | CACGTC | 1 cut(s) | 206 |
| AluBI | AGCT | 2 cut(s) | 41, 316 |
| AluI | AGCT | 2 cut(s) | 41, 316 |
| AoxI | GGCC | 1 cut(s) | 514 |
| ApoI | RAATTY | 2 cut(s) | 21, 436 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 354 |
| AspS9I | GGNCC | 1 cut(s) | 442 |
| AsuHPI | GGTGA | 1 cut(s) | 484 |
| AsuII | TTCGAA | 1 cut(s) | 185 |
| AvaII | GGWCC | 1 cut(s) | 442 |
| AxyI | CCTNAGG | 1 cut(s) | 446 |
| BfaI | CTAG | 1 cut(s) | 251 |
| BfmI | CTRYAG | 1 cut(s) | 199 |
| BglII | AGATCT | 1 cut(s) | 247 |
| Bme18I | GGWCC | 1 cut(s) | 442 |
| BmgBI | CACGTC | 1 cut(s) | 206 |
| BmgT120I | GGNCC | 1 cut(s) | 442 |
| BoxI | GACNNNNGTC | 1 cut(s) | 237 |
| Bpu14I | TTCGAA | 1 cut(s) | 185 |
| BpuEI | CTTGAG | 1 cut(s) | 254 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 284, 314, 390, 420 |
| Bse21I | CCTNAGG | 1 cut(s) | 446 |
| Bse3DI | GCAATG | 1 cut(s) | 342 |
| BseGI | GGATG | 1 cut(s) | 13 |
| BseMI | GCAATG | 1 cut(s) | 342 |
| BseRI | GAGGAG | 2 cut(s) | 305, 378 |
| BshFI | GGCC | 1 cut(s) | 516 |
| BsnI | GGCC | 1 cut(s) | 516 |
| Bsp119I | TTCGAA | 1 cut(s) | 185 |
| Bsp143I | GATC | 2 cut(s) | 132, 247 |
| BspANI | GGCC | 1 cut(s) | 516 |
| BspMAI | CTGCAG | 1 cut(s) | 203 |
| BspT104I | TTCGAA | 1 cut(s) | 185 |
| BsrDI | GCAATG | 1 cut(s) | 342 |
| BssMI | GATC | 2 cut(s) | 132, 247 |
| Bst4CI | ACNGT | 1 cut(s) | 125 |
| BstBI | TTCGAA | 1 cut(s) | 185 |
| BstC8I | GCNNGC | 1 cut(s) | 514 |
| BstDEI | CTNAG | 3 cut(s) | 446, 482, 496 |
| BstF5I | GGATG | 1 cut(s) | 13 |
| BstKTI | GATC | 2 cut(s) | 135, 250 |
| BstMBI | GATC | 2 cut(s) | 132, 247 |
| BstNSI | RCATGY | 1 cut(s) | 301 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 237 |
| BstSFI | CTRYAG | 1 cut(s) | 199 |
| BstX2I | RGATCY | 1 cut(s) | 247 |
| BstYI | RGATCY | 1 cut(s) | 247 |
| Bsu36I | CCTNAGG | 1 cut(s) | 446 |
| BsuRI | GGCC | 1 cut(s) | 516 |
| BtrI | CACGTC | 1 cut(s) | 206 |
| BtsCI | GGATG | 1 cut(s) | 13 |
| BtsI | GCAGTG | 1 cut(s) | 386 |
| BtsIMutI | CAGTG | 2 cut(s) | 130, 386 |
| Cac8I | GCNNGC | 1 cut(s) | 514 |
| Cfr13I | GGNCC | 1 cut(s) | 442 |
| CviAII | CATG | 3 cut(s) | 109, 118, 298 |
| CviJI | RGCY | 5 cut(s) | 41, 316, 341, 451, 516 |
| CviKI_1 | RGCY | 5 cut(s) | 41, 316, 341, 451, 516 |
| DdeI | CTNAG | 3 cut(s) | 446, 482, 496 |
| DpnI | GATC | 2 cut(s) | 134, 249 |
| DpnII | GATC | 2 cut(s) | 132, 247 |
| Eco147I | AGGCCT | 1 cut(s) | 516 |
| Eco47I | GGWCC | 1 cut(s) | 442 |
| Eco57I | CTGAAG | 3 cut(s) | 220, 264, 503 |
| Eco81I | CCTNAGG | 1 cut(s) | 446 |
| EcoRI | GAATTC | 1 cut(s) | 21 |
| FaeI | CATG | 3 cut(s) | 112, 121, 301 |
| FaiI | YATR | 9 cut(s) | 59, 84, 110, 119, 143, 156, 299, 306, 467 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 501, 533 |
| FatI | CATG | 3 cut(s) | 108, 117, 297 |
| FokI | GGATG | 1 cut(s) | 20 |
| FspBI | CTAG | 1 cut(s) | 251 |
| HaeIII | GGCC | 1 cut(s) | 516 |
| Hin1II | CATG | 3 cut(s) | 112, 121, 301 |
| HindIII | AAGCTT | 1 cut(s) | 39 |
| HinfI | GANTC | 2 cut(s) | 259, 355 |
| HphI | GGTGA | 1 cut(s) | 484 |
| Hpy166II | GTNNAC | 1 cut(s) | 161 |
| Hpy188I | TCNGA | 1 cut(s) | 522 |
| Hpy188III | TCNNGA | 2 cut(s) | 242, 271 |
| Hpy8I | GTNNAC | 1 cut(s) | 161 |
| HpyAV | CCTTC | 3 cut(s) | 58, 185, 527 |
| HpyCH4III | ACNGT | 1 cut(s) | 125 |
| HpyCH4IV | ACGT | 2 cut(s) | 172, 205 |
| HpyCH4V | TGCA | 5 cut(s) | 11, 61, 201, 330, 347 |
| HpyF3I | CTNAG | 3 cut(s) | 446, 482, 496 |
| HpySE526I | ACGT | 2 cut(s) | 172, 205 |
| Hsp92II | CATG | 3 cut(s) | 112, 121, 301 |
| Kzo9I | GATC | 2 cut(s) | 132, 247 |
| LmnI | GCTCC | 1 cut(s) | 365 |
| LpnPI | CCDG | 4 cut(s) | 135, 255, 442, 498 |
| MaeI | CTAG | 1 cut(s) | 251 |
| MaeII | ACGT | 2 cut(s) | 172, 205 |
| MaeIII | GTNAC | 3 cut(s) | 208, 230, 528 |
| MalI | GATC | 2 cut(s) | 134, 249 |
| MboI | GATC | 2 cut(s) | 132, 247 |
| MboII | GAAGA | 4 cut(s) | 113, 254, 257, 488 |
| MflI | RGATCY | 1 cut(s) | 247 |
| MluCI | AATT | 4 cut(s) | 21, 177, 436, 454 |
| MnlI | CCTC | 6 cut(s) | 7, 11, 283, 356, 392, 493 |
| MroXI | GAANNNNTTC | 1 cut(s) | 354 |
| MseI | TTAA | 3 cut(s) | 3, 312, 423 |
| NdeII | GATC | 2 cut(s) | 132, 247 |
| NlaIII | CATG | 3 cut(s) | 112, 121, 301 |
| NmuCI | GTSAC | 3 cut(s) | 208, 230, 528 |
| NspI | RCATGY | 1 cut(s) | 301 |
| NspV | TTCGAA | 1 cut(s) | 185 |
| PceI | AGGCCT | 1 cut(s) | 516 |
| PdmI | GAANNNNTTC | 1 cut(s) | 354 |
| PfeI | GAWTC | 2 cut(s) | 259, 355 |
| PshAI | GACNNNNGTC | 1 cut(s) | 237 |
| PspPI | GGNCC | 1 cut(s) | 442 |
| PstI | CTGCAG | 1 cut(s) | 203 |
| PsuI | RGATCY | 1 cut(s) | 247 |
| SaqAI | TTAA | 3 cut(s) | 3, 312, 423 |
| Sau3AI | GATC | 2 cut(s) | 132, 247 |
| Sau96I | GGNCC | 1 cut(s) | 442 |
| SetI | ASST | 9 cut(s) | 43, 58, 175, 196, 208, 318, 403, 447, 497 |
| SfcI | CTRYAG | 1 cut(s) | 199 |
| SfuI | TTCGAA | 1 cut(s) | 185 |
| SinI | GGWCC | 1 cut(s) | 442 |
| SmlI | CTYRAG | 1 cut(s) | 269 |
| SmoI | CTYRAG | 1 cut(s) | 269 |
| Sse9I | AATT | 4 cut(s) | 21, 177, 436, 454 |
| SseBI | AGGCCT | 1 cut(s) | 516 |
| SspMI | CTAG | 1 cut(s) | 251 |
| StuI | AGGCCT | 1 cut(s) | 516 |
| TaaI | ACNGT | 1 cut(s) | 125 |
| TaiI | ACGT | 2 cut(s) | 175, 208 |
| TaqI | TCGA | 2 cut(s) | 46, 185 |
| TasI | AATT | 4 cut(s) | 21, 177, 436, 454 |
| TfiI | GAWTC | 2 cut(s) | 259, 355 |
| Tru1I | TTAA | 3 cut(s) | 3, 312, 423 |
| Tru9I | TTAA | 3 cut(s) | 3, 312, 423 |
| TscAI | CASTG | 2 cut(s) | 130, 386 |
| TseFI | GTSAC | 3 cut(s) | 208, 230, 528 |
| Tsp45I | GTSAC | 3 cut(s) | 208, 230, 528 |
| TspDTI | ATGAA | 6 cut(s) | 51, 182, 204, 254, 290, 407 |
| TspRI | CASTG | 2 cut(s) | 130, 386 |
| VpaK11BI | GGWCC | 1 cut(s) | 442 |
| XapI | RAATTY | 2 cut(s) | 21, 436 |
| XceI | RCATGY | 1 cut(s) | 301 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 436 |
| XmnI | GAANNNNTTC | 1 cut(s) | 354 |
| XspI | CTAG | 1 cut(s) | 251 |