Lysosomal Pro-X
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G65760 |
| fragaria_vesca | FvH4_1g18520 FvH4_1g18520 FvH4_1g18520 FvH4_1g18520 FvH4_1g18520 |
| malus_domestica | MD15G1302800.v1.1 |
| prunus_persica | Prupe.6G213900_v2.0.a1 Prupe.6G213900_v2.0.a1 |
| pyrus_communis | pycom15g26610 |
| rosa_chinensis | RchiOBHm_Chr2g0109161 |
| rosa_laevigata | RLG00000017719 |
| rosa_multiflora | Rmu_co8489283.1_g000001 Rmu_sc0005459.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00134450 |
| rosa_rugosa | Rorug02G0157700 |
| rosa_samantha | Rh2AG209700 Rh2BG220100 Rh2CG212200 Rh2DG215800 Rh2DG215900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1254 |
| Acc16I | TGCGCA | 1 cut(s) | 1437 |
| Acc65I | GGTACC | 1 cut(s) | 279 |
| AccB1I | GGYRCC | 1 cut(s) | 279 |
| AccII | CGCG | 1 cut(s) | 759 |
| AclI | AACGTT | 1 cut(s) | 725 |
| AclWI | GGATC | 6 cut(s) | 616, 1286, 1358, 1371, 1466, 1535 |
| AcoI | YGGCCR | 1 cut(s) | 531 |
| AcsI | RAATTY | 4 cut(s) | 143, 568, 956, 1535 |
| AcuI | CTGAAG | 2 cut(s) | 229, 1446 |
| AdeI | CACNNNGTG | 1 cut(s) | 304 |
| AfaI | GTAC | 5 cut(s) | 281, 443, 464, 499, 546 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 120, 300, 410, 438, 974, 1373 |
| AflII | CTTAAG | 1 cut(s) | 644 |
| AgeI | ACCGGT | 1 cut(s) | 438 |
| AgsI | TTSAA | 6 cut(s) | 698, 1052, 1232, 1246, 1321, 1490 |
| AhlI | ACTAGT | 1 cut(s) | 805 |
| AjnI | CCWGG | 3 cut(s) | 135, 528, 973 |
| Alw21I | GWGCWC | 5 cut(s) | 300, 561, 600, 673, 1154 |
| Alw44I | GTGCAC | 2 cut(s) | 669, 1150 |
| AlwI | GGATC | 6 cut(s) | 616, 1286, 1358, 1371, 1466, 1535 |
| AoxI | GGCC | 7 cut(s) | 123, 322, 414, 531, 832, 1268, 1311 |
| ApaI | GGGCCC | 1 cut(s) | 127 |
| ApaLI | GTGCAC | 2 cut(s) | 669, 1150 |
| ApeKI | GCWGC | 3 cut(s) | 274, 629, 771 |
| ApoI | RAATTY | 4 cut(s) | 143, 568, 956, 1535 |
| AsiGI | ACCGGT | 1 cut(s) | 438 |
| Asp718I | GGTACC | 1 cut(s) | 279 |
| AspLEI | GCGC | 4 cut(s) | 311, 688, 759, 1438 |
| AspS9I | GGNCC | 4 cut(s) | 123, 124, 323, 414 |
| AsuC2I | CCSGG | 2 cut(s) | 520, 590 |
| AsuII | TTCGAA | 1 cut(s) | 702 |
| BaeGI | GKGCMC | 3 cut(s) | 127, 673, 1154 |
| BamHI | GGATCC | 1 cut(s) | 1363 |
| BanI | GGYRCC | 1 cut(s) | 279 |
| BanII | GRGCYC | 2 cut(s) | 127, 561 |
| BbsI | GAAGAC | 1 cut(s) | 1239 |
| Bbv12I | GWGCWC | 5 cut(s) | 300, 561, 600, 673, 1154 |
| BbvI | GCAGC | 3 cut(s) | 286, 641, 758 |
| BccI | CCATC | 3 cut(s) | 335, 1016, 1124 |
| BceAI | ACGGC | 2 cut(s) | 38, 445 |
| BciT130I | CCWGG | 3 cut(s) | 137, 530, 975 |
| BciVI | GTATCC | 2 cut(s) | 660, 1102 |
| BclI | TGATCA | 1 cut(s) | 285 |
| BcnI | CCSGG | 2 cut(s) | 520, 590 |
| BcuI | ACTAGT | 1 cut(s) | 805 |
| BfaI | CTAG | 4 cut(s) | 495, 806, 1029, 1176 |
| BfrI | CTTAAG | 1 cut(s) | 644 |
| BfuI | GTATCC | 2 cut(s) | 660, 1102 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 181 |
| BglII | AGATCT | 1 cut(s) | 1447 |
| BisI | GCNGC | 8 cut(s) | 176, 233, 275, 317, 343, 355, 630, 772 |
| BlpI | GCTNAGC | 1 cut(s) | 228 |
| BlsI | GCNGC | 8 cut(s) | 177, 234, 276, 318, 344, 356, 631, 773 |
| Bme1390I | CCNGG | 5 cut(s) | 137, 520, 530, 590, 975 |
| BmgT120I | GGNCC | 4 cut(s) | 123, 124, 323, 414 |
| BmiI | GGNNCC | 6 cut(s) | 125, 126, 281, 325, 415, 1365 |
| BmrFI | CCNGG | 5 cut(s) | 137, 520, 530, 590, 975 |
| BmrI | ACTGGG | 1 cut(s) | 310 |
| BmsI | GCATC | 5 cut(s) | 95, 366, 790, 1177, 1447 |
| BmuI | ACTGGG | 1 cut(s) | 310 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1014 |
| BpiI | GAAGAC | 1 cut(s) | 1239 |
| BpmI | CTGGAG | 2 cut(s) | 1058, 1124 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 228 |
| Bpu14I | TTCGAA | 1 cut(s) | 702 |
| BpuEI | CTTGAG | 1 cut(s) | 545 |
| BpuMI | CCSGG | 2 cut(s) | 520, 590 |
| Bsa29I | ATCGAT | 1 cut(s) | 885 |
| BsaJI | CCNNGG | 5 cut(s) | 136, 417, 528, 1265, 1367 |
| BsaWI | WCCGGW | 1 cut(s) | 438 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 6, 36 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 120, 300, 410, 438, 974, 1373 |
| Bse118I | RCCGGY | 2 cut(s) | 180, 438 |
| Bse1I | ACTGG | 4 cut(s) | 305, 905, 1041, 1084 |
| Bse3DI | GCAATG | 2 cut(s) | 657, 936 |
| BseBI | CCWGG | 3 cut(s) | 137, 530, 975 |
| BseCI | ATCGAT | 1 cut(s) | 885 |
| BseDI | CCNNGG | 5 cut(s) | 136, 417, 528, 1265, 1367 |
| BseGI | GGATG | 3 cut(s) | 642, 805, 1192 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 120, 300, 410, 438, 974, 1373 |
| BseMI | GCAATG | 2 cut(s) | 657, 936 |
| BseMII | CTCAG | 3 cut(s) | 242, 804, 924 |
| BseNI | ACTGG | 4 cut(s) | 305, 905, 1041, 1084 |
| BseRI | GAGGAG | 2 cut(s) | 100, 103 |
| BseSI | GKGCMC | 3 cut(s) | 127, 673, 1154 |
| BseXI | GCAGC | 3 cut(s) | 286, 641, 758 |
| Bsh1236I | CGCG | 1 cut(s) | 759 |
| Bsh1285I | CGRYCG | 1 cut(s) | 173 |
| BshFI | GGCC | 7 cut(s) | 125, 324, 416, 533, 834, 1270, 1313 |
| BshNI | GGYRCC | 1 cut(s) | 279 |
| BshTI | ACCGGT | 1 cut(s) | 438 |
| BshVI | ATCGAT | 1 cut(s) | 885 |
| BsiEI | CGRYCG | 1 cut(s) | 173 |
| BsiHKAI | GWGCWC | 5 cut(s) | 300, 561, 600, 673, 1154 |
| BsiSI | CCGG | 4 cut(s) | 181, 439, 519, 590 |
| BsiWI | CGTACG | 1 cut(s) | 462 |
| BslFI | GGGAC | 2 cut(s) | 831, 1039 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 120, 300, 410, 438, 974, 1373 |
| BsmFI | GGGAC | 2 cut(s) | 831, 1039 |
| BsmI | GAATGC | 3 cut(s) | 496, 1097, 1244 |
| BsnI | GGCC | 7 cut(s) | 125, 324, 416, 533, 834, 1270, 1313 |
| Bsp119I | TTCGAA | 1 cut(s) | 702 |
| Bsp120I | GGGCCC | 1 cut(s) | 123 |
| Bsp1286I | GDGCHC | 6 cut(s) | 127, 300, 561, 600, 673, 1154 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 228 |
| Bsp19I | CCATGG | 1 cut(s) | 417 |
| BspANI | GGCC | 7 cut(s) | 125, 324, 416, 533, 834, 1270, 1313 |
| BspCNI | CTCAG | 3 cut(s) | 241, 805, 923 |
| BspDI | ATCGAT | 1 cut(s) | 885 |
| BspFNI | CGCG | 1 cut(s) | 759 |
| BspLI | GGNNCC | 6 cut(s) | 125, 126, 281, 325, 415, 1365 |
| BspPI | GGATC | 6 cut(s) | 616, 1286, 1358, 1371, 1466, 1535 |
| BspT104I | TTCGAA | 1 cut(s) | 702 |
| BspT107I | GGYRCC | 1 cut(s) | 279 |
| BspTI | CTTAAG | 1 cut(s) | 644 |
| BsrDI | GCAATG | 2 cut(s) | 657, 936 |
| BsrFI | RCCGGY | 2 cut(s) | 180, 438 |
| BsrI | ACTGG | 4 cut(s) | 305, 905, 1041, 1084 |
| BssAI | RCCGGY | 2 cut(s) | 180, 438 |
| BssECI | CCNNGG | 5 cut(s) | 136, 417, 528, 1265, 1367 |
| BssT1I | CCWWGG | 3 cut(s) | 417, 1265, 1367 |
| Bst2UI | CCWGG | 3 cut(s) | 137, 530, 975 |
| Bst4CI | ACNGT | 2 cut(s) | 96, 504 |
| Bst6I | CTCTTC | 2 cut(s) | 471, 1228 |
| BstAFI | CTTAAG | 1 cut(s) | 644 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 668 |
| BstBI | TTCGAA | 1 cut(s) | 702 |
| BstC8I | GCNNGC | 4 cut(s) | 399, 1146, 1150, 1192 |
| BstDEI | CTNAG | 5 cut(s) | 228, 813, 910, 1444, 1476 |
| BstDSI | CCRYGG | 1 cut(s) | 417 |
| BstF5I | GGATG | 3 cut(s) | 642, 805, 1192 |
| BstFNI | CGCG | 1 cut(s) | 759 |
| BstHHI | GCGC | 4 cut(s) | 311, 688, 759, 1438 |
| BstMCI | CGRYCG | 1 cut(s) | 173 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 138, 181, 190, 351, 539, 668, 683, 1421 |
| BstNI | CCWGG | 3 cut(s) | 137, 530, 975 |
| BstNSI | RCATGY | 2 cut(s) | 1198, 1570 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1014 |
| BstSCI | CCNGG | 5 cut(s) | 135, 518, 528, 588, 973 |
| BstSLI | GKGCMC | 3 cut(s) | 127, 673, 1154 |
| BstUI | CGCG | 1 cut(s) | 759 |
| BstV1I | GCAGC | 3 cut(s) | 286, 641, 758 |
| BstV2I | GAAGAC | 1 cut(s) | 1239 |
| BstX2I | RGATCY | 2 cut(s) | 1363, 1447 |
| BstYI | RGATCY | 2 cut(s) | 1363, 1447 |
| Bsu15I | ATCGAT | 1 cut(s) | 885 |
| BsuI | GTATCC | 2 cut(s) | 660, 1102 |
| BsuRI | GGCC | 7 cut(s) | 125, 324, 416, 533, 834, 1270, 1313 |
| BsuTUI | ATCGAT | 1 cut(s) | 885 |
| BtgI | CCRYGG | 1 cut(s) | 417 |
| BtgZI | GCGATG | 2 cut(s) | 34, 72 |
| BtsCI | GGATG | 3 cut(s) | 642, 805, 1192 |
| BtsI | GCAGTG | 1 cut(s) | 1387 |
| BtsIMutI | CAGTG | 5 cut(s) | 298, 500, 1034, 1077, 1387 |
| Cac8I | GCNNGC | 4 cut(s) | 399, 1146, 1150, 1192 |
| CfoI | GCGC | 4 cut(s) | 311, 688, 759, 1438 |
| Cfr10I | RCCGGY | 2 cut(s) | 180, 438 |
| Cfr13I | GGNCC | 4 cut(s) | 123, 124, 323, 414 |
| ClaI | ATCGAT | 1 cut(s) | 885 |
| CseI | GACGC | 1 cut(s) | 780 |
| Csp6I | GTAC | 5 cut(s) | 280, 442, 463, 498, 545 |
| CspAI | ACCGGT | 1 cut(s) | 438 |
| CviAII | CATG | 6 cut(s) | 418, 795, 1195, 1275, 1301, 1567 |
| CviQI | GTAC | 5 cut(s) | 280, 442, 463, 498, 545 |
| DdeI | CTNAG | 5 cut(s) | 228, 813, 910, 1444, 1476 |
| DraIII | CACNNNGTG | 1 cut(s) | 304 |
| EaeI | YGGCCR | 1 cut(s) | 531 |
| Eam1104I | CTCTTC | 2 cut(s) | 471, 1228 |
| EarI | CTCTTC | 2 cut(s) | 471, 1228 |
| EciI | GGCGGA | 1 cut(s) | 1311 |
| Ecl136II | GAGCTC | 1 cut(s) | 559 |
| Eco130I | CCWWGG | 3 cut(s) | 417, 1265, 1367 |
| Eco147I | AGGCCT | 1 cut(s) | 1270 |
| Eco24I | GRGCYC | 2 cut(s) | 127, 561 |
| Eco53kI | GAGCTC | 1 cut(s) | 559 |
| Eco57I | CTGAAG | 2 cut(s) | 229, 1446 |
| EcoICRI | GAGCTC | 1 cut(s) | 559 |
| EcoO109I | RGGNCCY | 1 cut(s) | 124 |
| EcoRII | CCWGG | 3 cut(s) | 135, 528, 973 |
| EcoT14I | CCWWGG | 3 cut(s) | 417, 1265, 1367 |
| EcoT38I | GRGCYC | 2 cut(s) | 127, 561 |
| ErhI | CCWWGG | 3 cut(s) | 417, 1265, 1367 |
| FaeI | CATG | 6 cut(s) | 421, 798, 1198, 1278, 1304, 1570 |
| FaqI | GGGAC | 2 cut(s) | 831, 1039 |
| FatI | CATG | 6 cut(s) | 417, 794, 1194, 1274, 1300, 1566 |
| FauI | CCCGC | 1 cut(s) | 81 |
| FbaI | TGATCA | 1 cut(s) | 285 |
| Fnu4HI | GCNGC | 8 cut(s) | 176, 233, 275, 317, 343, 355, 630, 772 |
| FokI | GGATG | 3 cut(s) | 649, 812, 1199 |
| FriOI | GRGCYC | 2 cut(s) | 127, 561 |
| Fsp4HI | GCNGC | 8 cut(s) | 176, 233, 275, 317, 343, 355, 630, 772 |
| FspAI | RTGCGCAY | 1 cut(s) | 1437 |
| FspBI | CTAG | 4 cut(s) | 495, 806, 1029, 1176 |
| FspI | TGCGCA | 1 cut(s) | 1437 |
| GlaI | GCGC | 4 cut(s) | 310, 687, 758, 1437 |
| GluI | GCNGC | 8 cut(s) | 176, 233, 275, 317, 343, 355, 630, 772 |
| GsuI | CTGGAG | 2 cut(s) | 1058, 1124 |
| HaeIII | GGCC | 7 cut(s) | 125, 324, 416, 533, 834, 1270, 1313 |
| HapII | CCGG | 4 cut(s) | 181, 439, 519, 590 |
| HgaI | GACGC | 1 cut(s) | 780 |
| HhaI | GCGC | 4 cut(s) | 311, 688, 759, 1438 |
| Hin1II | CATG | 6 cut(s) | 421, 798, 1198, 1278, 1304, 1570 |
| Hin6I | GCGC | 4 cut(s) | 309, 686, 757, 1436 |
| HinP1I | GCGC | 4 cut(s) | 309, 686, 757, 1436 |
| HincII | GTYRAC | 1 cut(s) | 937 |
| HindII | GTYRAC | 1 cut(s) | 937 |
| HinfI | GANTC | 3 cut(s) | 452, 691, 908 |
| HpaI | GTTAAC | 1 cut(s) | 937 |
| HpaII | CCGG | 4 cut(s) | 181, 439, 519, 590 |
| Hpy166II | GTNNAC | 4 cut(s) | 500, 671, 937, 1152 |
| Hpy188I | TCNGA | 3 cut(s) | 898, 1117, 1402 |
| Hpy188III | TCNNGA | 5 cut(s) | 25, 431, 869, 1019, 1184 |
| Hpy8I | GTNNAC | 4 cut(s) | 500, 671, 937, 1152 |
| Hpy99I | CGWCG | 6 cut(s) | 38, 41, 44, 47, 59, 1415 |
| HpyAV | CCTTC | 6 cut(s) | 344, 575, 817, 1046, 1424, 1514 |
| HpyCH4III | ACNGT | 2 cut(s) | 96, 504 |
| HpyCH4IV | ACGT | 1 cut(s) | 725 |
| HpyCH4V | TGCA | 8 cut(s) | 86, 401, 662, 671, 803, 999, 1152, 1390 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 138, 181, 190, 351, 539, 668, 683, 1421 |
| HpyF3I | CTNAG | 5 cut(s) | 228, 813, 910, 1444, 1476 |
| HpySE526I | ACGT | 1 cut(s) | 725 |
| Hsp92II | CATG | 6 cut(s) | 421, 798, 1198, 1278, 1304, 1570 |
| HspAI | GCGC | 4 cut(s) | 309, 686, 757, 1436 |
| KpnI | GGTACC | 1 cut(s) | 283 |
| Ksp22I | TGATCA | 1 cut(s) | 285 |
| KspAI | GTTAAC | 1 cut(s) | 937 |
| LmnI | GCTCC | 3 cut(s) | 394, 556, 1039 |
| Lsp1109I | GCAGC | 3 cut(s) | 286, 641, 758 |
| LweI | GCATC | 5 cut(s) | 95, 366, 790, 1177, 1447 |
| MaeI | CTAG | 4 cut(s) | 495, 806, 1029, 1176 |
| MaeII | ACGT | 1 cut(s) | 725 |
| MaeIII | GTNAC | 2 cut(s) | 206, 808 |
| MfeI | CAATTG | 1 cut(s) | 663 |
| MflI | RGATCY | 2 cut(s) | 1363, 1447 |
| MhlI | GDGCHC | 6 cut(s) | 127, 300, 561, 600, 673, 1154 |
| MlyI | GAGTC | 2 cut(s) | 461, 902 |
| MmeI | TCCRAC | 2 cut(s) | 1115, 1226 |
| MseI | TTAA | 6 cut(s) | 645, 777, 875, 936, 1215, 1509 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1157 |
| MspA1I | CMGCKG | 4 cut(s) | 232, 277, 316, 844 |
| MspCI | CTTAAG | 1 cut(s) | 644 |
| MspI | CCGG | 4 cut(s) | 181, 439, 519, 590 |
| MspR9I | CCNGG | 5 cut(s) | 137, 520, 530, 590, 975 |
| MunI | CAATTG | 1 cut(s) | 663 |
| Mva1269I | GAATGC | 3 cut(s) | 496, 1097, 1244 |
| MvaI | CCWGG | 3 cut(s) | 137, 530, 975 |
| MvnI | CGCG | 1 cut(s) | 759 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 138, 181, 190, 351, 539, 668, 683, 1421 |
| NciI | CCSGG | 2 cut(s) | 520, 590 |
| NcoI | CCATGG | 1 cut(s) | 417 |
| NlaIII | CATG | 6 cut(s) | 421, 798, 1198, 1278, 1304, 1570 |
| NlaIV | GGNNCC | 6 cut(s) | 125, 126, 281, 325, 415, 1365 |
| NsbI | TGCGCA | 1 cut(s) | 1437 |
| NspI | RCATGY | 2 cut(s) | 1198, 1570 |
| NspV | TTCGAA | 1 cut(s) | 702 |
| PceI | AGGCCT | 1 cut(s) | 1270 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 39, 42, 51, 260 |
| PctI | GAATGC | 3 cut(s) | 496, 1097, 1244 |
| PfeI | GAWTC | 1 cut(s) | 691 |
| Pfl23II | CGTACG | 1 cut(s) | 462 |
| PinAI | ACCGGT | 1 cut(s) | 438 |
| PkrI | GCNGC | 8 cut(s) | 177, 234, 276, 318, 344, 356, 631, 773 |
| PleI | GAGTC | 2 cut(s) | 460, 902 |
| PpsI | GAGTC | 2 cut(s) | 460, 902 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1014 |
| PsiI | TTATAA | 1 cut(s) | 1254 |
| Psp124BI | GAGCTC | 1 cut(s) | 561 |
| Psp1406I | AACGTT | 1 cut(s) | 725 |
| Psp6I | CCWGG | 3 cut(s) | 135, 528, 973 |
| PspGI | CCWGG | 3 cut(s) | 135, 528, 973 |
| PspLI | CGTACG | 1 cut(s) | 462 |
| PspN4I | GGNNCC | 6 cut(s) | 125, 126, 281, 325, 415, 1365 |
| PspOMI | GGGCCC | 1 cut(s) | 123 |
| PspPI | GGNCC | 4 cut(s) | 123, 124, 323, 414 |
| PsuI | RGATCY | 2 cut(s) | 1363, 1447 |
| PvuII | CAGCTG | 1 cut(s) | 844 |
| RsaI | GTAC | 5 cut(s) | 281, 443, 464, 499, 546 |
| RsaNI | GTAC | 5 cut(s) | 280, 442, 463, 498, 545 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1157 |
| SacI | GAGCTC | 1 cut(s) | 561 |
| SaqAI | TTAA | 6 cut(s) | 645, 777, 875, 936, 1215, 1509 |
| SatI | GCNGC | 8 cut(s) | 176, 233, 275, 317, 343, 355, 630, 772 |
| Sau96I | GGNCC | 4 cut(s) | 123, 124, 323, 414 |
| SchI | GAGTC | 2 cut(s) | 461, 902 |
| ScrFI | CCNGG | 5 cut(s) | 137, 520, 530, 590, 975 |
| SduI | GDGCHC | 6 cut(s) | 127, 300, 561, 600, 673, 1154 |
| SfaNI | GCATC | 5 cut(s) | 95, 366, 790, 1177, 1447 |
| SfuI | TTCGAA | 1 cut(s) | 702 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1157 |
| SmlI | CTYRAG | 2 cut(s) | 560, 644 |
| SmoI | CTYRAG | 2 cut(s) | 560, 644 |
| SpeI | ACTAGT | 1 cut(s) | 805 |
| SseBI | AGGCCT | 1 cut(s) | 1270 |
| SspMI | CTAG | 4 cut(s) | 495, 806, 1029, 1176 |
| SstI | GAGCTC | 1 cut(s) | 561 |
| StuI | AGGCCT | 1 cut(s) | 1270 |
| StyD4I | CCNGG | 5 cut(s) | 135, 518, 528, 588, 973 |
| StyI | CCWWGG | 3 cut(s) | 417, 1265, 1367 |
| TaaI | ACNGT | 2 cut(s) | 96, 504 |
| TaiI | ACGT | 1 cut(s) | 728 |
| TaqI | TCGA | 7 cut(s) | 169, 360, 702, 868, 885, 1460, 1530 |
| TatI | WGTACW | 2 cut(s) | 497, 544 |
| TauI | GCSGC | 5 cut(s) | 178, 235, 319, 345, 357 |
| TfiI | GAWTC | 1 cut(s) | 691 |
| Tru1I | TTAA | 6 cut(s) | 645, 777, 875, 936, 1215, 1509 |
| Tru9I | TTAA | 6 cut(s) | 645, 777, 875, 936, 1215, 1509 |
| TscAI | CASTG | 5 cut(s) | 305, 507, 1041, 1084, 1387 |
| TseI | GCWGC | 3 cut(s) | 274, 629, 771 |
| TspDTI | ATGAA | 1 cut(s) | 57 |
| TspGWI | ACGGA | 4 cut(s) | 194, 269, 569, 1564 |
| TspRI | CASTG | 5 cut(s) | 305, 507, 1041, 1084, 1387 |
| Vha464I | CTTAAG | 1 cut(s) | 644 |
| VneI | GTGCAC | 2 cut(s) | 669, 1150 |
| XapI | RAATTY | 4 cut(s) | 143, 568, 956, 1535 |
| XceI | RCATGY | 2 cut(s) | 1198, 1570 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1272, 1357 |
| XspI | CTAG | 4 cut(s) | 495, 806, 1029, 1176 |