Rh2BG220100

Lysosomal Pro-X

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Reverse (-)
21227470 .. 21231221
3752 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG220100.1

Sequence Viewer

Length: 1005 bp
ATGGCAAAACCCAAACACTCCCATCTTTCTCTTATCCATCTCATCATCTCCATCATCATCACTTCATCTCTACCATCACTTGCATCCAACCGTCCCCCACGCTTCCTCGGACCCAATTCTCCGTCACCACCGGAACGACGTCAGCAGCAGCAAAAACTGATCCAATACGAAACCCGATACTTCTCCCAGAATCTCGACCACTTCAGCTTCTCCGAAACCCCGAAATTCCAACAGCGCTACCTCGTCAACACCGAGCACTGGGTCGGCCCACAACGCCAGGGCCCAATCTTTCTCTACTGCGGCAACGAAGGCGACATCGTATGGTTCGCCGAAAACACCGGCTTCGTCTGGGAACTCGCGCCGCGTTTTGGCGCCATGGTCCTCTTTCCCGAACATCGTTACTATGGAGAGTCAATGCCGTACGGGAGTGAACAAGAGGCGTACAAGAATGCCACTACGCTGTCGTTTCTTACGGCCGAGCAAGCGCTGGCCGATTTTGCTGTGTTGATCACGGAGCTGAAGCGAGATTGGTCGGCCGAAGGCTGCCCTGTGGTGCTGTTTGGCGGTTCGTATGGCGGAATGTTGGCAGCGTGGATGAGGCTCAAGTATCCCCATATTGCTATCGGTGCACTTGCTTCTTCGGCGCCAATTCTTCAGTTCGAAGATATTGTGCCGACAGAGACGTTTTATGACATTGTCTCCAGTGATTTCAGGCGTGAAAGTAGCAGCTGCTTTAACACTATAAAAGAGTCGTGGGATGCATTAATGACCGAGGGTCGAAAACAAAATGGGCTGCACCAGCTGACAAAAACCTTCCATTTATGTGGAGAATTAAAGAGGACAGAAGATCTTGTAGATTGGTTGGAGTCTGCCTATAGTTATTTGGCGATGGTGAACTACCCATATGGGTCGGAATTTATGATGCCTTTGCCCGGACACCCAATTAGAGAGGTTTGTTGGTCTAGCATGTGTCTAATAACCTTACGAACTCTTGTTTCTCTTTAG

Protein Analysis

334

Amino Acids

38.11

Weight (kDa)

5.94

Isoelectric Point (pI)

48.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_S28 PF05577 63 - 320 2.6e-64 Serine carboxypeptidase S28
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 142
AccB1I GGYRCC 2 cut(s) 371, 643
AccII CGCG 2 cut(s) 359, 364
AciI CCGC 4 cut(s) 300, 362, 564, 576
AclWI GGATC 1 cut(s) 154
AcoI YGGCCR 3 cut(s) 474, 489, 534
AcsI RAATTY 2 cut(s) 224, 914
AcuI CTGAAG 3 cut(s) 187, 539, 638
AcyI GRCGYC 3 cut(s) 139, 372, 644
AfaI GTAC 2 cut(s) 422, 443
AfeI AGCGCT 2 cut(s) 236, 486
AfiI CCNNNNNNNGG 3 cut(s) 258, 368, 932
AhdI GACNNNNNGTC 1 cut(s) 774
AjnI CCWGG 1 cut(s) 276
AluBI AGCT 4 cut(s) 207, 517, 729, 802
AluI AGCT 4 cut(s) 207, 517, 729, 802
Alw21I GWGCWC 2 cut(s) 258, 631
Alw26I GTCTC 2 cut(s) 674, 703
Alw44I GTGCAC 1 cut(s) 627
AlwI GGATC 1 cut(s) 154
Aor51HI AGCGCT 2 cut(s) 236, 486
AoxI GGCC 5 cut(s) 265, 280, 474, 489, 534
ApaI GGGCCC 1 cut(s) 284
ApaLI GTGCAC 1 cut(s) 627
ApeKI GCWGC 7 cut(s) 145, 148, 543, 587, 726, 729, 793
ApoI RAATTY 2 cut(s) 224, 914
AseI ATTAAT 1 cut(s) 764
AspLEI GCGC 5 cut(s) 237, 361, 374, 487, 646
AspS9I GGNCC 5 cut(s) 110, 266, 280, 281, 379
AsuC2I CCSGG 1 cut(s) 933
AsuHPI GGTGA 2 cut(s) 117, 904
AsuII TTCGAA 1 cut(s) 660
AvaII GGWCC 2 cut(s) 110, 379
BaeGI GKGCMC 2 cut(s) 284, 631
BanI GGYRCC 2 cut(s) 371, 643
BanII GRGCYC 1 cut(s) 284
Bbv12I GWGCWC 2 cut(s) 258, 631
BbvI GCAGC 7 cut(s) 157, 160, 530, 599, 716, 738, 780
BccI CCATC 5 cut(s) 30, 45, 59, 82, 883
BceAI ACGGC 2 cut(s) 403, 489
BciT130I CCWGG 1 cut(s) 278
BciVI GTATCC 1 cut(s) 618
BclI TGATCA 1 cut(s) 507
BcnI CCSGG 1 cut(s) 933
BcoDI GTCTC 2 cut(s) 674, 703
BfaI CTAG 1 cut(s) 963
BfmI CTRYAG 1 cut(s) 874
BfoI RGCGCY 4 cut(s) 238, 375, 488, 647
BfuI GTATCC 1 cut(s) 618
BglII AGATCT 1 cut(s) 847
BisI GCNGC 9 cut(s) 146, 149, 301, 362, 544, 588, 727, 730, 794
BlsI GCNGC 9 cut(s) 147, 150, 302, 363, 545, 589, 728, 731, 795
Bme1390I CCNGG 2 cut(s) 278, 933
Bme18I GGWCC 2 cut(s) 110, 379
BmeRI GACNNNNNGTC 1 cut(s) 774
BmgT120I GGNCC 5 cut(s) 110, 266, 280, 281, 379
BmiI GGNNCC 4 cut(s) 112, 282, 373, 645
BmrFI CCNGG 2 cut(s) 278, 933
BmrI ACTGGG 1 cut(s) 268
BmsI GCATC 3 cut(s) 92, 748, 912
BmuI ACTGGG 1 cut(s) 268
BpmI CTGGAG 1 cut(s) 685
Bpu14I TTCGAA 1 cut(s) 660
BpuEI CTTGAG 1 cut(s) 587
BpuMI CCSGG 1 cut(s) 933
BsaHI GRCGYC 3 cut(s) 139, 372, 644
BsaJI CCNNGG 4 cut(s) 106, 277, 375, 771
BsaWI WCCGGW 1 cut(s) 130
BsaXI ACNNNNNCTCC 2 cut(s) 683, 713
Bsc4I CCNNNNNNNGG 3 cut(s) 258, 368, 932
Bse118I RCCGGY 1 cut(s) 338
Bse1I ACTGG 2 cut(s) 263, 702
BseBI CCWGG 1 cut(s) 278
BseDI CCNNGG 4 cut(s) 106, 277, 375, 771
BseGI GGATG 3 cut(s) 83, 600, 763
BseLI CCNNNNNNNGG 3 cut(s) 258, 368, 932
BseNI ACTGG 2 cut(s) 263, 702
BseSI GKGCMC 2 cut(s) 284, 631
BseX3I CGGCCG 2 cut(s) 474, 534
BseXI GCAGC 7 cut(s) 157, 160, 530, 599, 716, 738, 780
BsgI GTGCAG 1 cut(s) 779
Bsh1236I CGCG 2 cut(s) 359, 364
Bsh1285I CGRYCG 2 cut(s) 477, 537
BshFI GGCC 5 cut(s) 267, 282, 476, 491, 536
BshNI GGYRCC 2 cut(s) 371, 643
BsiEI CGRYCG 2 cut(s) 477, 537
BsiHKAI GWGCWC 2 cut(s) 258, 631
BsiSI CCGG 3 cut(s) 131, 339, 933
BsiWI CGTACG 1 cut(s) 420
BslFI GGGAC 1 cut(s) 78
BslI CCNNNNNNNGG 3 cut(s) 258, 368, 932
BsmAI GTCTC 2 cut(s) 674, 703
BsmBI CGTCTC 1 cut(s) 674
BsmFI GGGAC 1 cut(s) 78
BsmI GAATGC 1 cut(s) 454
BsnI GGCC 5 cut(s) 267, 282, 476, 491, 536
Bsp119I TTCGAA 1 cut(s) 660
Bsp120I GGGCCC 1 cut(s) 280
Bsp1286I GDGCHC 3 cut(s) 258, 284, 631
Bsp143I GATC 3 cut(s) 159, 507, 847
Bsp19I CCATGG 1 cut(s) 375
BspACI CCGC 4 cut(s) 300, 362, 564, 576
BspANI GGCC 5 cut(s) 267, 282, 476, 491, 536
BspFNI CGCG 2 cut(s) 359, 364
BspLI GGNNCC 4 cut(s) 112, 282, 373, 645
BspPI GGATC 1 cut(s) 154
BspT104I TTCGAA 1 cut(s) 660
BspT107I GGYRCC 2 cut(s) 371, 643
BsrFI RCCGGY 1 cut(s) 338
BsrI ACTGG 2 cut(s) 263, 702
BssAI RCCGGY 1 cut(s) 338
BssECI CCNNGG 4 cut(s) 106, 277, 375, 771
BssMI GATC 3 cut(s) 159, 507, 847
BssNI GRCGYC 3 cut(s) 139, 372, 644
BssT1I CCWWGG 1 cut(s) 375
Bst2UI CCWGG 1 cut(s) 278
Bst4CI ACNGT 1 cut(s) 92
BstACI GRCGYC 3 cut(s) 139, 372, 644
BstBI TTCGAA 1 cut(s) 660
BstC8I GCNNGC 2 cut(s) 483, 489
BstDSI CCRYGG 1 cut(s) 375
BstF5I GGATG 3 cut(s) 83, 600, 763
BstFNI CGCG 2 cut(s) 359, 364
BstH2I RGCGCY 4 cut(s) 238, 375, 488, 647
BstHHI GCGC 5 cut(s) 237, 361, 374, 487, 646
BstKTI GATC 3 cut(s) 162, 510, 850
BstMAI GTCTC 2 cut(s) 674, 703
BstMBI GATC 3 cut(s) 159, 507, 847
BstMCI CGRYCG 2 cut(s) 477, 537
BstMWI GCNNNNNNNGC 7 cut(s) 273, 309, 482, 497, 626, 641, 799
BstNI CCWGG 1 cut(s) 278
BstNSI RCATGY 1 cut(s) 970
BstSCI CCNGG 2 cut(s) 276, 931
BstSFI CTRYAG 1 cut(s) 874
BstSLI GKGCMC 2 cut(s) 284, 631
BstUI CGCG 2 cut(s) 359, 364
BstV1I GCAGC 7 cut(s) 157, 160, 530, 599, 716, 738, 780
BstX2I RGATCY 1 cut(s) 847
BstXI CCANNNNNNTGG 1 cut(s) 824
BstYI RGATCY 1 cut(s) 847
BstZI CGGCCG 2 cut(s) 474, 534
BsuI GTATCC 1 cut(s) 618
BsuRI GGCC 5 cut(s) 267, 282, 476, 491, 536
BtgI CCRYGG 1 cut(s) 375
BtgZI GCGATG 1 cut(s) 902
BtsCI GGATG 3 cut(s) 83, 600, 763
BtsIMutI CAGTG 2 cut(s) 256, 709
Cac8I GCNNGC 2 cut(s) 483, 489
CfoI GCGC 5 cut(s) 237, 361, 374, 487, 646
Cfr10I RCCGGY 1 cut(s) 338
Cfr13I GGNCC 5 cut(s) 110, 266, 280, 281, 379
Csp6I GTAC 2 cut(s) 421, 442
CviAII CATG 2 cut(s) 376, 967
CviQI GTAC 2 cut(s) 421, 442
DinI GGCGCC 2 cut(s) 373, 645
DpnI GATC 3 cut(s) 161, 509, 849
DpnII GATC 3 cut(s) 159, 507, 847
DriI GACNNNNNGTC 1 cut(s) 774
EaeI YGGCCR 3 cut(s) 474, 489, 534
EagI CGGCCG 2 cut(s) 474, 534
Eam1105I GACNNNNNGTC 1 cut(s) 774
EciI GGCGGA 1 cut(s) 591
EclXI CGGCCG 2 cut(s) 474, 534
Eco130I CCWWGG 1 cut(s) 375
Eco24I GRGCYC 1 cut(s) 284
Eco47I GGWCC 2 cut(s) 110, 379
Eco47III AGCGCT 2 cut(s) 236, 486
Eco52I CGGCCG 2 cut(s) 474, 534
Eco57I CTGAAG 3 cut(s) 187, 539, 638
EcoO109I RGGNCCY 1 cut(s) 280
EcoRII CCWGG 1 cut(s) 276
EcoT14I CCWWGG 1 cut(s) 375
EcoT22I ATGCAT 1 cut(s) 763
EcoT38I GRGCYC 1 cut(s) 284
EgeI GGCGCC 2 cut(s) 373, 645
EheI GGCGCC 2 cut(s) 373, 645
ErhI CCWWGG 1 cut(s) 375
Esp3I CGTCTC 1 cut(s) 674
FaeI CATG 2 cut(s) 379, 970
FaqI GGGAC 1 cut(s) 78
FatI CATG 2 cut(s) 375, 966
FauNDI CATATG 1 cut(s) 904
FbaI TGATCA 1 cut(s) 507
Fnu4HI GCNGC 9 cut(s) 146, 149, 301, 362, 544, 588, 727, 730, 794
FokI GGATG 3 cut(s) 70, 607, 770
FriOI GRGCYC 1 cut(s) 284
Fsp4HI GCNGC 9 cut(s) 146, 149, 301, 362, 544, 588, 727, 730, 794
FspBI CTAG 1 cut(s) 963
GlaI GCGC 5 cut(s) 236, 360, 373, 486, 645
GluI GCNGC 9 cut(s) 146, 149, 301, 362, 544, 588, 727, 730, 794
GsuI CTGGAG 1 cut(s) 685
HaeII RGCGCY 4 cut(s) 238, 375, 488, 647
HaeIII GGCC 5 cut(s) 267, 282, 476, 491, 536
HapII CCGG 3 cut(s) 131, 339, 933
HhaI GCGC 5 cut(s) 237, 361, 374, 487, 646
Hin1I GRCGYC 3 cut(s) 139, 372, 644
Hin1II CATG 2 cut(s) 379, 970
Hin6I GCGC 5 cut(s) 235, 359, 372, 485, 644
HinP1I GCGC 5 cut(s) 235, 359, 372, 485, 644
HincII GTYRAC 1 cut(s) 247
HindII GTYRAC 1 cut(s) 247
HinfI GANTC 4 cut(s) 190, 410, 749, 866
HpaII CCGG 3 cut(s) 131, 339, 933
HphI GGTGA 2 cut(s) 117, 904
Hpy166II GTNNAC 4 cut(s) 247, 431, 629, 895
Hpy188I TCNGA 3 cut(s) 110, 214, 913
Hpy188III TCNNGA 2 cut(s) 194, 389
Hpy8I GTNNAC 4 cut(s) 247, 431, 629, 895
Hpy99I CGWCG 1 cut(s) 141
HpyAV CCTTC 3 cut(s) 302, 533, 823
HpyCH4III ACNGT 1 cut(s) 92
HpyCH4IV ACGT 2 cut(s) 139, 683
HpyCH4V TGCA 4 cut(s) 83, 629, 761, 796
HpyF10VI GCNNNNNNNGC 7 cut(s) 273, 309, 482, 497, 626, 641, 799
HpySE526I ACGT 2 cut(s) 139, 683
Hsp92I GRCGYC 3 cut(s) 139, 372, 644
Hsp92II CATG 2 cut(s) 379, 970
HspAI GCGC 5 cut(s) 235, 359, 372, 485, 644
KasI GGCGCC 2 cut(s) 371, 643
Ksp22I TGATCA 1 cut(s) 507
Kzo9I GATC 3 cut(s) 159, 507, 847
LmnI GCTCC 1 cut(s) 514
Lsp1109I GCAGC 7 cut(s) 157, 160, 530, 599, 716, 738, 780
LweI GCATC 3 cut(s) 92, 748, 912
MaeI CTAG 1 cut(s) 963
MaeII ACGT 2 cut(s) 139, 683
MaeIII GTNAC 2 cut(s) 123, 398
MalI GATC 3 cut(s) 161, 509, 849
MboI GATC 3 cut(s) 159, 507, 847
MboII GAAGA 4 cut(s) 630, 644, 674, 857
MflI RGATCY 1 cut(s) 847
MhlI GDGCHC 3 cut(s) 258, 284, 631
MluCI AATT 6 cut(s) 115, 224, 648, 830, 914, 942
Mly113I GGCGCC 2 cut(s) 372, 644
MlyI GAGTC 3 cut(s) 419, 758, 875
MmeI TCCRAC 4 cut(s) 111, 253, 843, 891
MnlI CCTC 8 cut(s) 116, 251, 392, 430, 591, 766, 831, 943
Mph1103I ATGCAT 1 cut(s) 763
MseI TTAA 3 cut(s) 735, 764, 833
MslI CAYNNNNRTG 1 cut(s) 822
MspA1I CMGCKG 2 cut(s) 729, 802
MspI CCGG 3 cut(s) 131, 339, 933
MspR9I CCNGG 2 cut(s) 278, 933
Mva1269I GAATGC 1 cut(s) 454
MvaI CCWGG 1 cut(s) 278
MvnI CGCG 2 cut(s) 359, 364
MwoI GCNNNNNNNGC 7 cut(s) 273, 309, 482, 497, 626, 641, 799
NarI GGCGCC 2 cut(s) 372, 644
NciI CCSGG 1 cut(s) 933
NcoI CCATGG 1 cut(s) 375
NdeI CATATG 1 cut(s) 904
NdeII GATC 3 cut(s) 159, 507, 847
NlaIII CATG 2 cut(s) 379, 970
NlaIV GGNNCC 4 cut(s) 112, 282, 373, 645
NmeAIII GCCGAG 1 cut(s) 502
NmuCI GTSAC 1 cut(s) 123
NsiI ATGCAT 1 cut(s) 763
NspI RCATGY 1 cut(s) 970
NspV TTCGAA 1 cut(s) 660
PcsI WCGNNNNNNNCGW 1 cut(s) 249
PctI GAATGC 1 cut(s) 454
PfeI GAWTC 1 cut(s) 190
Pfl23II CGTACG 1 cut(s) 420
PflFI GACNNNGTC 1 cut(s) 695
PkrI GCNGC 9 cut(s) 147, 150, 302, 363, 545, 589, 728, 731, 795
PleI GAGTC 3 cut(s) 418, 757, 874
PluTI GGCGCC 2 cut(s) 375, 647
PpsI GAGTC 3 cut(s) 418, 757, 874
PshBI ATTAAT 1 cut(s) 764
Psp6I CCWGG 1 cut(s) 276
PspGI CCWGG 1 cut(s) 276
PspLI CGTACG 1 cut(s) 420
PspN4I GGNNCC 4 cut(s) 112, 282, 373, 645
PspOMI GGGCCC 1 cut(s) 280
PspPI GGNCC 5 cut(s) 110, 266, 280, 281, 379
PsuI RGATCY 1 cut(s) 847
PsyI GACNNNGTC 1 cut(s) 695
PvuII CAGCTG 2 cut(s) 729, 802
RsaI GTAC 2 cut(s) 422, 443
RsaNI GTAC 2 cut(s) 421, 442
RseI CAYNNNNRTG 1 cut(s) 822
SaqAI TTAA 3 cut(s) 735, 764, 833
SatI GCNGC 9 cut(s) 146, 149, 301, 362, 544, 588, 727, 730, 794
Sau3AI GATC 3 cut(s) 159, 507, 847
Sau96I GGNCC 5 cut(s) 110, 266, 280, 281, 379
SchI GAGTC 3 cut(s) 419, 758, 875
ScrFI CCNGG 2 cut(s) 278, 933
SduI GDGCHC 3 cut(s) 258, 284, 631
SfaNI GCATC 3 cut(s) 92, 748, 912
SfcI CTRYAG 1 cut(s) 874
SfoI GGCGCC 2 cut(s) 373, 645
SfuI TTCGAA 1 cut(s) 660
SinI GGWCC 2 cut(s) 110, 379
SmiMI CAYNNNNRTG 1 cut(s) 822
SmlI CTYRAG 1 cut(s) 602
SmoI CTYRAG 1 cut(s) 602
Sse9I AATT 6 cut(s) 115, 224, 648, 830, 914, 942
SsiI CCGC 4 cut(s) 300, 362, 564, 576
SspDI GGCGCC 2 cut(s) 371, 643
SspMI CTAG 1 cut(s) 963
StyD4I CCNGG 2 cut(s) 276, 931
StyI CCWWGG 1 cut(s) 375
TaaI ACNGT 1 cut(s) 92
TaiI ACGT 2 cut(s) 142, 686
TaqI TCGA 3 cut(s) 195, 660, 778
TaqII GACCGA 1 cut(s) 785
TasI AATT 6 cut(s) 115, 224, 648, 830, 914, 942
TauI GCSGC 2 cut(s) 303, 364
TfiI GAWTC 1 cut(s) 190
Tru1I TTAA 3 cut(s) 735, 764, 833
Tru9I TTAA 3 cut(s) 735, 764, 833
TscAI CASTG 2 cut(s) 263, 709
TseFI GTSAC 1 cut(s) 123
TseI GCWGC 7 cut(s) 145, 148, 543, 587, 726, 729, 793
Tsp45I GTSAC 1 cut(s) 123
TspDTI ATGAA 1 cut(s) 54
TspGWI ACGGA 2 cut(s) 111, 527
TspRI CASTG 2 cut(s) 263, 709
Tth111I GACNNNGTC 1 cut(s) 695
VneI GTGCAC 1 cut(s) 627
VpaK11BI GGWCC 2 cut(s) 110, 379
VspI ATTAAT 1 cut(s) 764
XapI RAATTY 2 cut(s) 224, 914
XceI RCATGY 1 cut(s) 970
XspI CTAG 1 cut(s) 963
ZraI GACGTC 1 cut(s) 140
Zsp2I ATGCAT 1 cut(s) 763
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.