Rmu_co8489283.1_g000001

Lysosomal Pro-X

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8489283.1
Physical Location & Seq
Reverse (-)
2 .. 1903
1902 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8489283.1_g000001.1.cds

Sequence Viewer

Length: 1223 bp
atggcaaaacccaaacactcccatctttctcttgtccatctcatcatctccatcatcatcacttcatctctaccatcacttgcatccaaccgtcccccacgcttcctcggacccaattctccgtcaccaccggaacgacgtcagcagcagcaaaaactgatccaatacgaaacccgatacttctcccagaatctcgaccacttcagcttctccgaaaccccgaaattccagcagcgctacctcgtcaacgccgagcactgggtcggcccacaacgccagggcccaatctttctctactgcggcaacgaaggcgacatcgtatggttcgccgaaaacaccggcttcgtctgggaactcgcgccgcgttttggcgccatggtcctctttcccgaacatcgttactatggagagtcaatgccgtacgggagtgaacaagaggcgtacaagaatgccactacgctgtcgtttcttacggccgagcaagcgctggccgattttgctgtgttgatcacggagctgaagcgagattggtcggccgaaggctgccctgtggtgctgtttggcggttcgtatggcggaatgttggcagcgtggatgaggctcaagtatccccatattgctatcggtgcacttgcttcttcggcgccaattcttcagttcgaagatattgtgccgacagagacgttttatgacattgtctccagtgatttcaggcgtgaaagtagcagctgctttaacactataaaagagtcgtgggatgcattaatgaccgagggtcagaaacaaaatgggctgcaccagctgacaaaaaccttccatttatgtggagaattaaagaggacagaagatcttgtagattggttggagtctgcctatagttatttggcgatggtgaactacccatatgggtcggaatttatgatgcctttgcctggacacccaattagagaggtttgcagaaagattgatggttgtcctgaagggactagcactttggagcgcatatttgaaggcataagtgtatatcacaattacagtggaaaagctgactgctttgagctggaagatgaatctgaagtcggcacagatggttggaattggcaggcttgcacagaaatggttatgccaatgtctagtagccgggatagaagcatgtttcaaacatatgattataatttctcctcttttcaagagtggtgctggaagcagttcaatgtgaaacc

Protein Analysis

408

Amino Acids

46.76

Weight (kDa)

5.23

Isoelectric Point (pI)

49.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1173
AatII GACGTC 1 cut(s) 142
AccB1I GGYRCC 2 cut(s) 371, 643
AccII CGCG 2 cut(s) 359, 364
AciI CCGC 4 cut(s) 300, 362, 564, 576
AclWI GGATC 1 cut(s) 154
AcoI YGGCCR 3 cut(s) 474, 489, 534
AcsI RAATTY 2 cut(s) 224, 914
AcuI CTGAAG 5 cut(s) 187, 539, 638, 999, 1095
AcyI GRCGYC 3 cut(s) 139, 372, 644
AfaI GTAC 2 cut(s) 422, 443
AfeI AGCGCT 2 cut(s) 236, 486
AfiI CCNNNNNNNGG 3 cut(s) 258, 368, 932
AgsI TTSAA 4 cut(s) 1010, 1160, 1190, 1213
AhdI GACNNNNNGTC 1 cut(s) 774
AjnI CCWGG 2 cut(s) 276, 931
AluBI AGCT 6 cut(s) 207, 517, 729, 802, 1046, 1060
AluI AGCT 6 cut(s) 207, 517, 729, 802, 1046, 1060
Alw21I GWGCWC 2 cut(s) 258, 631
Alw26I GTCTC 2 cut(s) 674, 703
Alw44I GTGCAC 1 cut(s) 627
AlwI GGATC 1 cut(s) 154
Aor51HI AGCGCT 2 cut(s) 236, 486
AoxI GGCC 5 cut(s) 265, 280, 474, 489, 534
ApaI GGGCCC 1 cut(s) 284
ApaLI GTGCAC 1 cut(s) 627
ApeKI GCWGC 8 cut(s) 145, 148, 232, 543, 587, 726, 729, 793
ApoI RAATTY 2 cut(s) 224, 914
ArsI GACNNNNNNTTYG 2 cut(s) 976, 1008
AseI ATTAAT 1 cut(s) 764
Asp700I GAANNNNTTC 1 cut(s) 1208
AspLEI GCGC 6 cut(s) 237, 361, 374, 487, 646, 1002
AspS9I GGNCC 5 cut(s) 110, 266, 280, 281, 379
AsuC2I CCSGG 1 cut(s) 1142
AsuHPI GGTGA 2 cut(s) 117, 904
AsuII TTCGAA 1 cut(s) 660
AvaII GGWCC 2 cut(s) 110, 379
BaeGI GKGCMC 2 cut(s) 284, 631
BanI GGYRCC 2 cut(s) 371, 643
BanII GRGCYC 1 cut(s) 284
Bbv12I GWGCWC 2 cut(s) 258, 631
BbvI GCAGC 8 cut(s) 157, 160, 244, 530, 599, 716, 738, 780
BccI CCATC 7 cut(s) 30, 45, 59, 82, 883, 962, 1082
BceAI ACGGC 2 cut(s) 403, 489
BciT130I CCWGG 2 cut(s) 278, 933
BciVI GTATCC 1 cut(s) 618
BclI TGATCA 1 cut(s) 507
BcnI CCSGG 1 cut(s) 1142
BcoDI GTCTC 2 cut(s) 674, 703
BfaI CTAG 2 cut(s) 987, 1134
BfmI CTRYAG 1 cut(s) 874
BfoI RGCGCY 4 cut(s) 238, 375, 488, 647
BfuI GTATCC 1 cut(s) 618
BglII AGATCT 1 cut(s) 847
Bme1390I CCNGG 3 cut(s) 278, 933, 1142
Bme18I GGWCC 2 cut(s) 110, 379
BmeRI GACNNNNNGTC 1 cut(s) 774
BmgT120I GGNCC 5 cut(s) 110, 266, 280, 281, 379
BmiI GGNNCC 4 cut(s) 112, 282, 373, 645
BmrFI CCNGG 3 cut(s) 278, 933, 1142
BmrI ACTGGG 1 cut(s) 268
BmsI GCATC 3 cut(s) 92, 748, 912
BmuI ACTGGG 1 cut(s) 268
BpmI CTGGAG 1 cut(s) 685
Bpu14I TTCGAA 1 cut(s) 660
BpuEI CTTGAG 1 cut(s) 587
BpuMI CCSGG 1 cut(s) 1142
BsaHI GRCGYC 3 cut(s) 139, 372, 644
BsaJI CCNNGG 4 cut(s) 106, 277, 375, 771
BsaWI WCCGGW 1 cut(s) 130
BsaXI ACNNNNNCTCC 2 cut(s) 683, 713
Bsc4I CCNNNNNNNGG 3 cut(s) 258, 368, 932
Bse118I RCCGGY 1 cut(s) 338
Bse1I ACTGG 2 cut(s) 263, 702
BseBI CCWGG 2 cut(s) 278, 933
BseDI CCNNGG 4 cut(s) 106, 277, 375, 771
BseGI GGATG 3 cut(s) 83, 600, 763
BseLI CCNNNNNNNGG 3 cut(s) 258, 368, 932
BseNI ACTGG 2 cut(s) 263, 702
BseRI GAGGAG 1 cut(s) 1171
BseSI GKGCMC 2 cut(s) 284, 631
BseX3I CGGCCG 2 cut(s) 474, 534
BseXI GCAGC 8 cut(s) 157, 160, 244, 530, 599, 716, 738, 780
BsgI GTGCAG 1 cut(s) 779
Bsh1236I CGCG 2 cut(s) 359, 364
Bsh1285I CGRYCG 2 cut(s) 477, 537
BshFI GGCC 5 cut(s) 267, 282, 476, 491, 536
BshNI GGYRCC 2 cut(s) 371, 643
BsiEI CGRYCG 2 cut(s) 477, 537
BsiHKAI GWGCWC 2 cut(s) 258, 631
BsiSI CCGG 3 cut(s) 131, 339, 1141
BsiWI CGTACG 1 cut(s) 420
BslFI GGGAC 2 cut(s) 78, 997
BslI CCNNNNNNNGG 3 cut(s) 258, 368, 932
BsmAI GTCTC 2 cut(s) 674, 703
BsmBI CGTCTC 1 cut(s) 674
BsmFI GGGAC 2 cut(s) 78, 997
BsmI GAATGC 1 cut(s) 454
BsnI GGCC 5 cut(s) 267, 282, 476, 491, 536
Bsp119I TTCGAA 1 cut(s) 660
Bsp120I GGGCCC 1 cut(s) 280
Bsp1286I GDGCHC 3 cut(s) 258, 284, 631
Bsp143I GATC 3 cut(s) 159, 507, 847
Bsp19I CCATGG 1 cut(s) 375
BspACI CCGC 4 cut(s) 300, 362, 564, 576
BspANI GGCC 5 cut(s) 267, 282, 476, 491, 536
BspFNI CGCG 2 cut(s) 359, 364
BspLI GGNNCC 4 cut(s) 112, 282, 373, 645
BspPI GGATC 1 cut(s) 154
BspT104I TTCGAA 1 cut(s) 660
BspT107I GGYRCC 2 cut(s) 371, 643
BsrFI RCCGGY 1 cut(s) 338
BsrI ACTGG 2 cut(s) 263, 702
BssAI RCCGGY 1 cut(s) 338
BssECI CCNNGG 4 cut(s) 106, 277, 375, 771
BssMI GATC 3 cut(s) 159, 507, 847
BssNI GRCGYC 3 cut(s) 139, 372, 644
BssT1I CCWWGG 1 cut(s) 375
Bst2UI CCWGG 2 cut(s) 278, 933
Bst4CI ACNGT 2 cut(s) 92, 1037
BstACI GRCGYC 3 cut(s) 139, 372, 644
BstBI TTCGAA 1 cut(s) 660
BstC8I GCNNGC 4 cut(s) 483, 489, 1104, 1108
BstDSI CCRYGG 1 cut(s) 375
BstF5I GGATG 3 cut(s) 83, 600, 763
BstFNI CGCG 2 cut(s) 359, 364
BstH2I RGCGCY 4 cut(s) 238, 375, 488, 647
BstHHI GCGC 6 cut(s) 237, 361, 374, 487, 646, 1002
BstKTI GATC 3 cut(s) 162, 510, 850
BstMAI GTCTC 2 cut(s) 674, 703
BstMBI GATC 3 cut(s) 159, 507, 847
BstMCI CGRYCG 2 cut(s) 477, 537
BstMWI GCNNNNNNNGC 7 cut(s) 273, 309, 482, 497, 626, 641, 799
BstNI CCWGG 2 cut(s) 278, 933
BstNSI RCATGY 1 cut(s) 1156
BstSCI CCNGG 3 cut(s) 276, 931, 1140
BstSFI CTRYAG 1 cut(s) 874
BstSLI GKGCMC 2 cut(s) 284, 631
BstUI CGCG 2 cut(s) 359, 364
BstV1I GCAGC 8 cut(s) 157, 160, 244, 530, 599, 716, 738, 780
BstX2I RGATCY 1 cut(s) 847
BstXI CCANNNNNNTGG 1 cut(s) 824
BstYI RGATCY 1 cut(s) 847
BstZI CGGCCG 2 cut(s) 474, 534
BsuI GTATCC 1 cut(s) 618
BsuRI GGCC 5 cut(s) 267, 282, 476, 491, 536
BtgI CCRYGG 1 cut(s) 375
BtgZI GCGATG 1 cut(s) 902
BtsCI GGATG 3 cut(s) 83, 600, 763
BtsIMutI CAGTG 3 cut(s) 256, 709, 1042
Cac8I GCNNGC 4 cut(s) 483, 489, 1104, 1108
CfoI GCGC 6 cut(s) 237, 361, 374, 487, 646, 1002
Cfr10I RCCGGY 1 cut(s) 338
Cfr13I GGNCC 5 cut(s) 110, 266, 280, 281, 379
Csp6I GTAC 2 cut(s) 421, 442
CspCI CAANNNNNGTGG 2 cut(s) 1018, 1053
CviAII CATG 2 cut(s) 376, 1153
CviQI GTAC 2 cut(s) 421, 442
DinI GGCGCC 2 cut(s) 373, 645
DpnI GATC 3 cut(s) 161, 509, 849
DpnII GATC 3 cut(s) 159, 507, 847
DriI GACNNNNNGTC 1 cut(s) 774
EaeI YGGCCR 3 cut(s) 474, 489, 534
EagI CGGCCG 2 cut(s) 474, 534
Eam1105I GACNNNNNGTC 1 cut(s) 774
EciI GGCGGA 1 cut(s) 591
EclXI CGGCCG 2 cut(s) 474, 534
Eco130I CCWWGG 1 cut(s) 375
Eco24I GRGCYC 1 cut(s) 284
Eco47I GGWCC 2 cut(s) 110, 379
Eco47III AGCGCT 2 cut(s) 236, 486
Eco52I CGGCCG 2 cut(s) 474, 534
Eco57I CTGAAG 5 cut(s) 187, 539, 638, 999, 1095
EcoO109I RGGNCCY 1 cut(s) 280
EcoRII CCWGG 2 cut(s) 276, 931
EcoT14I CCWWGG 1 cut(s) 375
EcoT22I ATGCAT 1 cut(s) 763
EcoT38I GRGCYC 1 cut(s) 284
EgeI GGCGCC 2 cut(s) 373, 645
EheI GGCGCC 2 cut(s) 373, 645
ErhI CCWWGG 1 cut(s) 375
Esp3I CGTCTC 1 cut(s) 674
FaeI CATG 2 cut(s) 379, 1156
FaqI GGGAC 2 cut(s) 78, 997
FatI CATG 2 cut(s) 375, 1152
FauNDI CATATG 2 cut(s) 904, 1165
FbaI TGATCA 1 cut(s) 507
FokI GGATG 3 cut(s) 70, 607, 770
FriOI GRGCYC 1 cut(s) 284
FspBI CTAG 2 cut(s) 987, 1134
GlaI GCGC 6 cut(s) 236, 360, 373, 486, 645, 1001
GsuI CTGGAG 1 cut(s) 685
HaeII RGCGCY 4 cut(s) 238, 375, 488, 647
HaeIII GGCC 5 cut(s) 267, 282, 476, 491, 536
HapII CCGG 3 cut(s) 131, 339, 1141
HhaI GCGC 6 cut(s) 237, 361, 374, 487, 646, 1002
Hin1I GRCGYC 3 cut(s) 139, 372, 644
Hin1II CATG 2 cut(s) 379, 1156
Hin6I GCGC 6 cut(s) 235, 359, 372, 485, 644, 1000
HinP1I GCGC 6 cut(s) 235, 359, 372, 485, 644, 1000
HincII GTYRAC 1 cut(s) 247
HindII GTYRAC 1 cut(s) 247
HinfI GANTC 5 cut(s) 190, 410, 749, 866, 1070
HpaII CCGG 3 cut(s) 131, 339, 1141
HphI GGTGA 2 cut(s) 117, 904
Hpy166II GTNNAC 4 cut(s) 247, 431, 629, 895
Hpy188I TCNGA 5 cut(s) 110, 214, 780, 913, 1075
Hpy188III TCNNGA 4 cut(s) 194, 389, 977, 1190
Hpy8I GTNNAC 4 cut(s) 247, 431, 629, 895
Hpy99I CGWCG 1 cut(s) 141
HpyAV CCTTC 5 cut(s) 302, 533, 823, 974, 1004
HpyCH4III ACNGT 2 cut(s) 92, 1037
HpyCH4IV ACGT 2 cut(s) 139, 683
HpyCH4V TGCA 6 cut(s) 83, 629, 761, 796, 957, 1110
HpyF10VI GCNNNNNNNGC 7 cut(s) 273, 309, 482, 497, 626, 641, 799
HpySE526I ACGT 2 cut(s) 139, 683
Hsp92I GRCGYC 3 cut(s) 139, 372, 644
Hsp92II CATG 2 cut(s) 379, 1156
HspAI GCGC 6 cut(s) 235, 359, 372, 485, 644, 1000
KasI GGCGCC 2 cut(s) 371, 643
Ksp22I TGATCA 1 cut(s) 507
Kzo9I GATC 3 cut(s) 159, 507, 847
LmnI GCTCC 2 cut(s) 514, 997
Lsp1109I GCAGC 8 cut(s) 157, 160, 244, 530, 599, 716, 738, 780
LweI GCATC 3 cut(s) 92, 748, 912
MaeI CTAG 2 cut(s) 987, 1134
MaeII ACGT 2 cut(s) 139, 683
MaeIII GTNAC 2 cut(s) 123, 398
MalI GATC 3 cut(s) 161, 509, 849
MboI GATC 3 cut(s) 159, 507, 847
MboII GAAGA 5 cut(s) 630, 644, 674, 857, 1076
MflI RGATCY 1 cut(s) 847
MhlI GDGCHC 3 cut(s) 258, 284, 631
MluCI AATT 9 cut(s) 115, 224, 648, 830, 914, 942, 1030, 1096, 1174
Mly113I GGCGCC 2 cut(s) 372, 644
MlyI GAGTC 3 cut(s) 419, 758, 875
MmeI TCCRAC 4 cut(s) 111, 843, 891, 1073
MnlI CCTC 9 cut(s) 116, 251, 392, 430, 591, 766, 831, 943, 1192
Mph1103I ATGCAT 1 cut(s) 763
MroXI GAANNNNTTC 1 cut(s) 1208
MseI TTAA 3 cut(s) 735, 764, 833
MslI CAYNNNNRTG 2 cut(s) 822, 1115
MspA1I CMGCKG 2 cut(s) 729, 802
MspI CCGG 3 cut(s) 131, 339, 1141
MspR9I CCNGG 3 cut(s) 278, 933, 1142
Mva1269I GAATGC 1 cut(s) 454
MvaI CCWGG 2 cut(s) 278, 933
MvnI CGCG 2 cut(s) 359, 364
MwoI GCNNNNNNNGC 7 cut(s) 273, 309, 482, 497, 626, 641, 799
NarI GGCGCC 2 cut(s) 372, 644
NciI CCSGG 1 cut(s) 1142
NcoI CCATGG 1 cut(s) 375
NdeI CATATG 2 cut(s) 904, 1165
NdeII GATC 3 cut(s) 159, 507, 847
NlaIII CATG 2 cut(s) 379, 1156
NlaIV GGNNCC 4 cut(s) 112, 282, 373, 645
NmeAIII GCCGAG 2 cut(s) 277, 502
NmuCI GTSAC 1 cut(s) 123
NsiI ATGCAT 1 cut(s) 763
NspI RCATGY 1 cut(s) 1156
NspV TTCGAA 1 cut(s) 660
PcsI WCGNNNNNNNCGW 1 cut(s) 249
PctI GAATGC 1 cut(s) 454
PdmI GAANNNNTTC 1 cut(s) 1208
PfeI GAWTC 2 cut(s) 190, 1070
Pfl23II CGTACG 1 cut(s) 420
PflFI GACNNNGTC 1 cut(s) 695
PleI GAGTC 3 cut(s) 418, 757, 874
PluTI GGCGCC 2 cut(s) 375, 647
PpsI GAGTC 3 cut(s) 418, 757, 874
PshBI ATTAAT 1 cut(s) 764
PsiI TTATAA 1 cut(s) 1173
Psp6I CCWGG 2 cut(s) 276, 931
PspGI CCWGG 2 cut(s) 276, 931
PspLI CGTACG 1 cut(s) 420
PspN4I GGNNCC 4 cut(s) 112, 282, 373, 645
PspOMI GGGCCC 1 cut(s) 280
PspPI GGNCC 5 cut(s) 110, 266, 280, 281, 379
PsuI RGATCY 1 cut(s) 847
PsyI GACNNNGTC 1 cut(s) 695
PvuII CAGCTG 2 cut(s) 729, 802
RsaI GTAC 2 cut(s) 422, 443
RsaNI GTAC 2 cut(s) 421, 442
RseI CAYNNNNRTG 2 cut(s) 822, 1115
SaqAI TTAA 3 cut(s) 735, 764, 833
Sau3AI GATC 3 cut(s) 159, 507, 847
Sau96I GGNCC 5 cut(s) 110, 266, 280, 281, 379
SchI GAGTC 3 cut(s) 419, 758, 875
ScrFI CCNGG 3 cut(s) 278, 933, 1142
SduI GDGCHC 3 cut(s) 258, 284, 631
SfaNI GCATC 3 cut(s) 92, 748, 912
SfcI CTRYAG 1 cut(s) 874
SfoI GGCGCC 2 cut(s) 373, 645
SfuI TTCGAA 1 cut(s) 660
SinI GGWCC 2 cut(s) 110, 379
SmiMI CAYNNNNRTG 2 cut(s) 822, 1115
SmlI CTYRAG 1 cut(s) 602
SmoI CTYRAG 1 cut(s) 602
Sse9I AATT 9 cut(s) 115, 224, 648, 830, 914, 942, 1030, 1096, 1174
SsiI CCGC 4 cut(s) 300, 362, 564, 576
SspDI GGCGCC 2 cut(s) 371, 643
SspMI CTAG 2 cut(s) 987, 1134
StyD4I CCNGG 3 cut(s) 276, 931, 1140
StyI CCWWGG 1 cut(s) 375
TaaI ACNGT 2 cut(s) 92, 1037
TaiI ACGT 2 cut(s) 142, 686
TaqI TCGA 2 cut(s) 195, 660
TaqII GACCGA 1 cut(s) 785
TasI AATT 9 cut(s) 115, 224, 648, 830, 914, 942, 1030, 1096, 1174
TauI GCSGC 2 cut(s) 303, 364
TfiI GAWTC 2 cut(s) 190, 1070
Tru1I TTAA 3 cut(s) 735, 764, 833
Tru9I TTAA 3 cut(s) 735, 764, 833
TscAI CASTG 3 cut(s) 263, 709, 1042
TseFI GTSAC 1 cut(s) 123
TseI GCWGC 8 cut(s) 145, 148, 232, 543, 587, 726, 729, 793
Tsp45I GTSAC 1 cut(s) 123
TspDTI ATGAA 2 cut(s) 54, 1083
TspGWI ACGGA 2 cut(s) 111, 527
TspRI CASTG 3 cut(s) 263, 709, 1042
Tth111I GACNNNGTC 1 cut(s) 695
VneI GTGCAC 1 cut(s) 627
VpaK11BI GGWCC 2 cut(s) 110, 379
VspI ATTAAT 1 cut(s) 764
XapI RAATTY 2 cut(s) 224, 914
XceI RCATGY 1 cut(s) 1156
XmnI GAANNNNTTC 1 cut(s) 1208
XspI CTAG 2 cut(s) 987, 1134
ZraI GACGTC 1 cut(s) 140
Zsp2I ATGCAT 1 cut(s) 763
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.