Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005459.1

Orthogroup ID

OG0009817

Physical Location & Seq

Genomic Coordinates Reverse (-)

1 .. 3313

Gene Structure 3313 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005459.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1500 bp

atgtttagtgttgacaggactatcattgtccacctctcttcaattttgaacctttccagcctctccgactccattgaaaaccctcctcaggatcacaatcatctcgaaaatggtctaaatttgagtttcgtcttcgtcttcctcggtgctcactgcccacattatgagacccatcgattgatcggcagaatgatatttgtcttggccggaactccagttcagttcctcagaacctcaaacatggcaaaacccaaacactcccatctttctcttgtccatctcatcatctccatcatcatcacttcatctctaccatcacttgcatccaaccgtcccccacgcttcctcggacccaattctccgtcaccaccggaacgacgtcagcagcagcaaaaactgatccaatacgaaacccgatacttctcccagaatctcgaccacttcagcttctccgaaaccccgaaattccagcagcgctacctcgtcaacgccgagcactgggtcggcccacaacgccagggcccaatctttctctactgcggcaacgaaggcgacatcgtatggttcgccgaaaacaccggcttcgtctgggaactcgcgccgcgttttggcgccatggtcctctttcccgaacatcgttactatggagagtcaatgccgtacgggagtgaacaagaggcgtacaagaatgccactacgctgtcgtttcttacggccgagcaagcgctggccgattttgctgtgttgatcacggagctgaagcgagattggtcggccgaaggctgccctgtggtgctgtttggcggttcgtatggcggaatgttggcagcgtggatgaggctcaagtatccccatattgctatcggtgcacttgcttcttcggcgccaattcttcagttcgaagatattgtgccgacagagacgttttatgacattgtctccagtgatttcaggcgtgaaagtagcagctgctttaacactataaaagagtcgtgggatgcattaatgaccgagggtcagaaacaaaatgggctgcaccagctgacaaaaaccttccatttatgtggagaattaaagaggacagaagatcttgtagattggttggagtctgcctatagttatttggcgatggtgaactacccatatgggtcggaatttatgatgcctttgcctggacacccaattagagaggtttgcagaaagattgatggttgtcctgaagggactagcactttggagcgcatatttgaaggcataagtgtatatcacaattacagtggaaaagctgactgctttgagctggaagatgaatctgaagtcggcacagatggttggaattggcaggcttgcacagaaatggttatgccaatgtctagtagccgggatagaagcatgtttcaaacatatgattataatttctcctcttttcaagagtggtgctggaagcagttcaatgtgaaaccaaggcctacatggataacaacagagtttggtggacat

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001525 GO:0001568 GO:0001944 GO:0003008 GO:0003013 GO:0003073 GO:0003085 GO:0003674 GO:0003824 GO:0004177 GO:0006508 GO:0006807 GO:0006950 GO:0007275 GO:0008015 GO:0008150 GO:0008152 GO:0008217 GO:0008233 GO:0008238 GO:0008239 GO:0009611 GO:0009653 GO:0010594 GO:0010632 GO:0016787 GO:0019538 GO:0030334 GO:0032501 GO:0032502 GO:0032879 GO:0035239 GO:0035295 GO:0040012 GO:0042060 GO:0043170 GO:0043535 GO:0044238 GO:0045776 GO:0048514 GO:0048646 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051239 GO:0051270 GO:0060055 GO:0065007 GO:0065008 GO:0070011 GO:0071704 GO:0072358 GO:0072359 GO:0140096 GO:1901564 GO:2000145

KEGG Pathways

Metabolic & Signaling

ko04614 ko04974 map04614 map04974

Pfam Domains

Protein Families

Peptidase_S28

Protein Analysis

500

Amino Acids

57.14

Weight (kDa)

5.51

Isoelectric Point (pI)

46.86

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009817)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G65760
fragaria_vesca	FvH4_1g18520 FvH4_1g18520 FvH4_1g18520 FvH4_1g18520 FvH4_1g18520
malus_domestica	MD15G1302800.v1.1
prunus_persica	Prupe.6G213900_v2.0.a1 Prupe.6G213900_v2.0.a1
pyrus_communis	pycom15g26610
rosa_chinensis	RchiOBHm_Chr2g0109161
rosa_laevigata	RLG00000017719
rosa_multiflora	Rmu_co8489283.1_g000001 Rmu_sc0005459.1_g000001
rosa_roxburghii	Rroxscaffold_2G00134450
rosa_rugosa	Rorug02G0157700
rosa_samantha	Rh2AG209700 Rh2BG220100 Rh2CG212200 Rh2DG215800 Rh2DG215900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1413
AatII	GACGTC	1 cut(s)	382
AccB1I	GGYRCC	2 cut(s)	611, 883
AccII	CGCG	2 cut(s)	599, 604
AciI	CCGC	4 cut(s)	540, 602, 804, 816
AclWI	GGATC	2 cut(s)	99, 394
AcoI	YGGCCR	4 cut(s)	204, 714, 729, 774
AcsI	RAATTY	3 cut(s)	118, 464, 1154
AcuI	CTGAAG	5 cut(s)	427, 779, 878, 1239, 1335
AcyI	GRCGYC	3 cut(s)	379, 612, 884
AfaI	GTAC	2 cut(s)	662, 683
AfeI	AGCGCT	2 cut(s)	476, 726
AfiI	CCNNNNNNNGG	4 cut(s)	88, 498, 608, 1172
AgsI	TTSAA	7 cut(s)	42, 49, 77, 1250, 1400, 1430, 1453
AhdI	GACNNNNNGTC	1 cut(s)	1014
AjnI	CCWGG	2 cut(s)	516, 1171
AloI	GAACNNNNNNTCC	2 cut(s)	201, 233
AluBI	AGCT	6 cut(s)	447, 757, 969, 1042, 1286, 1300
AluI	AGCT	6 cut(s)	447, 757, 969, 1042, 1286, 1300
Alw21I	GWGCWC	3 cut(s)	151, 498, 871
Alw26I	GTCTC	3 cut(s)	161, 914, 943
Alw44I	GTGCAC	1 cut(s)	867
AlwI	GGATC	2 cut(s)	99, 394
Aor51HI	AGCGCT	2 cut(s)	476, 726
AoxI	GGCC	7 cut(s)	204, 505, 520, 714, 729, 774, 1466
ApaI	GGGCCC	1 cut(s)	524
ApaLI	GTGCAC	1 cut(s)	867
ApeKI	GCWGC	8 cut(s)	385, 388, 472, 783, 827, 966, 969, 1033
ApoI	RAATTY	3 cut(s)	118, 464, 1154
ArsI	GACNNNNNNTTYG	2 cut(s)	1216, 1248
AseI	ATTAAT	1 cut(s)	1004
Asp700I	GAANNNNTTC	1 cut(s)	1448
AspLEI	GCGC	6 cut(s)	477, 601, 614, 727, 886, 1242
AspS9I	GGNCC	5 cut(s)	350, 506, 520, 521, 619
AsuC2I	CCSGG	1 cut(s)	1382
AsuHPI	GGTGA	2 cut(s)	357, 1144
AsuII	TTCGAA	1 cut(s)	900
AvaII	GGWCC	2 cut(s)	350, 619
AxyI	CCTNAGG	1 cut(s)	87
BaeGI	GKGCMC	2 cut(s)	524, 871
BanI	GGYRCC	2 cut(s)	611, 883
BanII	GRGCYC	1 cut(s)	524
BbsI	GAAGAC	2 cut(s)	124, 130
Bbv12I	GWGCWC	3 cut(s)	151, 498, 871
BbvI	GCAGC	8 cut(s)	397, 400, 484, 770, 839, 956, 978, 1020
BccI	CCATC	8 cut(s)	180, 270, 285, 299, 322, 1123, 1202, 1322
BceAI	ACGGC	2 cut(s)	643, 729
BciT130I	CCWGG	2 cut(s)	518, 1173
BciVI	GTATCC	1 cut(s)	858
BclI	TGATCA	1 cut(s)	747
BcnI	CCSGG	1 cut(s)	1382
BcoDI	GTCTC	3 cut(s)	161, 914, 943
BfaI	CTAG	2 cut(s)	1227, 1374
BfmI	CTRYAG	1 cut(s)	1114
BfoI	RGCGCY	4 cut(s)	478, 615, 728, 887
BfuI	GTATCC	1 cut(s)	858
BglII	AGATCT	1 cut(s)	1087
Bme1390I	CCNGG	3 cut(s)	518, 1173, 1382
Bme18I	GGWCC	2 cut(s)	350, 619
BmeRI	GACNNNNNGTC	1 cut(s)	1014
BmgT120I	GGNCC	5 cut(s)	350, 506, 520, 521, 619
BmiI	GGNNCC	4 cut(s)	352, 522, 613, 885
BmrFI	CCNGG	3 cut(s)	518, 1173, 1382
BmrI	ACTGGG	1 cut(s)	508
BmsI	GCATC	3 cut(s)	332, 988, 1152
BmuI	ACTGGG	1 cut(s)	508
BpiI	GAAGAC	2 cut(s)	124, 130
BpmI	CTGGAG	2 cut(s)	198, 925
Bpu14I	TTCGAA	1 cut(s)	900
BpuEI	CTTGAG	1 cut(s)	827
BpuMI	CCSGG	1 cut(s)	1382
Bsa29I	ATCGAT	1 cut(s)	175
BsaBI	GATNNNNATC	1 cut(s)	96
BsaHI	GRCGYC	3 cut(s)	379, 612, 884
BsaI	GGTCTC	1 cut(s)	161
BsaJI	CCNNGG	6 cut(s)	142, 346, 517, 615, 1011, 1463
BsaWI	WCCGGW	1 cut(s)	370
BsaXI	ACNNNNNCTCC	2 cut(s)	923, 953
Bsc4I	CCNNNNNNNGG	4 cut(s)	88, 498, 608, 1172
Bse118I	RCCGGY	1 cut(s)	578
Bse1I	ACTGG	3 cut(s)	215, 503, 942
Bse21I	CCTNAGG	1 cut(s)	87
Bse8I	GATNNNNATC	1 cut(s)	96
BseBI	CCWGG	2 cut(s)	518, 1173
BseCI	ATCGAT	1 cut(s)	175
BseDI	CCNNGG	6 cut(s)	142, 346, 517, 615, 1011, 1463
BseGI	GGATG	3 cut(s)	323, 840, 1003
BseJI	GATNNNNATC	1 cut(s)	96
BseLI	CCNNNNNNNGG	4 cut(s)	88, 498, 608, 1172
BseMII	CTCAG	2 cut(s)	101, 241
BseNI	ACTGG	3 cut(s)	215, 503, 942
BseRI	GAGGAG	2 cut(s)	75, 1411
BseSI	GKGCMC	2 cut(s)	524, 871
BseX3I	CGGCCG	2 cut(s)	714, 774
BseXI	GCAGC	8 cut(s)	397, 400, 484, 770, 839, 956, 978, 1020
BsgI	GTGCAG	1 cut(s)	1019
Bsh1236I	CGCG	2 cut(s)	599, 604
Bsh1285I	CGRYCG	2 cut(s)	717, 777
BshFI	GGCC	7 cut(s)	206, 507, 522, 716, 731, 776, 1468
BshNI	GGYRCC	2 cut(s)	611, 883
BshVI	ATCGAT	1 cut(s)	175
BsiEI	CGRYCG	2 cut(s)	717, 777
BsiHKAI	GWGCWC	3 cut(s)	151, 498, 871
BsiSI	CCGG	4 cut(s)	207, 371, 579, 1381
BsiWI	CGTACG	1 cut(s)	660
BslFI	GGGAC	2 cut(s)	318, 1237
BslI	CCNNNNNNNGG	4 cut(s)	88, 498, 608, 1172
BsmAI	GTCTC	3 cut(s)	161, 914, 943
BsmBI	CGTCTC	1 cut(s)	914
BsmFI	GGGAC	2 cut(s)	318, 1237
BsmI	GAATGC	1 cut(s)	694
BsnI	GGCC	7 cut(s)	206, 507, 522, 716, 731, 776, 1468
Bso31I	GGTCTC	1 cut(s)	161
Bsp119I	TTCGAA	1 cut(s)	900
Bsp120I	GGGCCC	1 cut(s)	520
Bsp1286I	GDGCHC	4 cut(s)	151, 498, 524, 871
Bsp143I	GATC	5 cut(s)	91, 180, 399, 747, 1087
Bsp19I	CCATGG	1 cut(s)	615
BspACI	CCGC	4 cut(s)	540, 602, 804, 816
BspANI	GGCC	7 cut(s)	206, 507, 522, 716, 731, 776, 1468
BspCNI	CTCAG	2 cut(s)	100, 240
BspDI	ATCGAT	1 cut(s)	175
BspFNI	CGCG	2 cut(s)	599, 604
BspLI	GGNNCC	4 cut(s)	352, 522, 613, 885
BspPI	GGATC	2 cut(s)	99, 394
BspT104I	TTCGAA	1 cut(s)	900
BspT107I	GGYRCC	2 cut(s)	611, 883
BspTNI	GGTCTC	1 cut(s)	161
BsrFI	RCCGGY	1 cut(s)	578
BsrI	ACTGG	3 cut(s)	215, 503, 942
BssAI	RCCGGY	1 cut(s)	578
BssECI	CCNNGG	6 cut(s)	142, 346, 517, 615, 1011, 1463
BssMI	GATC	5 cut(s)	91, 180, 399, 747, 1087
BssNI	GRCGYC	3 cut(s)	379, 612, 884
BssT1I	CCWWGG	2 cut(s)	615, 1463
Bst2UI	CCWGG	2 cut(s)	518, 1173
Bst4CI	ACNGT	2 cut(s)	332, 1277
Bst6I	CTCTTC	1 cut(s)	43
BstACI	GRCGYC	3 cut(s)	379, 612, 884
BstBI	TTCGAA	1 cut(s)	900
BstC8I	GCNNGC	4 cut(s)	723, 729, 1344, 1348
BstDEI	CTNAG	2 cut(s)	87, 227
BstDSI	CCRYGG	1 cut(s)	615
BstF5I	GGATG	3 cut(s)	323, 840, 1003
BstFNI	CGCG	2 cut(s)	599, 604
BstH2I	RGCGCY	4 cut(s)	478, 615, 728, 887
BstHHI	GCGC	6 cut(s)	477, 601, 614, 727, 886, 1242
BstKTI	GATC	5 cut(s)	94, 183, 402, 750, 1090
BstMAI	GTCTC	3 cut(s)	161, 914, 943
BstMBI	GATC	5 cut(s)	91, 180, 399, 747, 1087
BstMCI	CGRYCG	2 cut(s)	717, 777
BstMWI	GCNNNNNNNGC	7 cut(s)	513, 549, 722, 737, 866, 881, 1039
BstNI	CCWGG	2 cut(s)	518, 1173
BstNSI	RCATGY	1 cut(s)	1396
BstSCI	CCNGG	3 cut(s)	516, 1171, 1380
BstSFI	CTRYAG	1 cut(s)	1114
BstSLI	GKGCMC	2 cut(s)	524, 871
BstUI	CGCG	2 cut(s)	599, 604
BstV1I	GCAGC	8 cut(s)	397, 400, 484, 770, 839, 956, 978, 1020
BstV2I	GAAGAC	2 cut(s)	124, 130
BstX2I	RGATCY	1 cut(s)	1087
BstXI	CCANNNNNNTGG	1 cut(s)	1064
BstYI	RGATCY	1 cut(s)	1087
BstZI	CGGCCG	2 cut(s)	714, 774
Bsu15I	ATCGAT	1 cut(s)	175
Bsu36I	CCTNAGG	1 cut(s)	87
BsuI	GTATCC	1 cut(s)	858
BsuRI	GGCC	7 cut(s)	206, 507, 522, 716, 731, 776, 1468
BsuTUI	ATCGAT	1 cut(s)	175
BtgI	CCRYGG	1 cut(s)	615
BtgZI	GCGATG	1 cut(s)	1142
BtsCI	GGATG	3 cut(s)	323, 840, 1003
BtsI	GCAGTG	1 cut(s)	151
BtsIMutI	CAGTG	4 cut(s)	151, 496, 949, 1282
Cac8I	GCNNGC	4 cut(s)	723, 729, 1344, 1348
CfoI	GCGC	6 cut(s)	477, 601, 614, 727, 886, 1242
Cfr10I	RCCGGY	1 cut(s)	578
Cfr13I	GGNCC	5 cut(s)	350, 506, 520, 521, 619
ClaI	ATCGAT	1 cut(s)	175
Csp6I	GTAC	2 cut(s)	661, 682
CspCI	CAANNNNNGTGG	2 cut(s)	1258, 1293
CviAII	CATG	4 cut(s)	241, 616, 1393, 1473
CviQI	GTAC	2 cut(s)	661, 682
DdeI	CTNAG	2 cut(s)	87, 227
DinI	GGCGCC	2 cut(s)	613, 885
DpnI	GATC	5 cut(s)	93, 182, 401, 749, 1089
DpnII	GATC	5 cut(s)	91, 180, 399, 747, 1087
DriI	GACNNNNNGTC	1 cut(s)	1014
EaeI	YGGCCR	4 cut(s)	204, 714, 729, 774
EagI	CGGCCG	2 cut(s)	714, 774
Eam1104I	CTCTTC	1 cut(s)	43
Eam1105I	GACNNNNNGTC	1 cut(s)	1014
EarI	CTCTTC	1 cut(s)	43
EciI	GGCGGA	1 cut(s)	831
EclXI	CGGCCG	2 cut(s)	714, 774
Eco130I	CCWWGG	2 cut(s)	615, 1463
Eco147I	AGGCCT	1 cut(s)	1468
Eco24I	GRGCYC	1 cut(s)	524
Eco31I	GGTCTC	1 cut(s)	161
Eco47I	GGWCC	2 cut(s)	350, 619
Eco47III	AGCGCT	2 cut(s)	476, 726
Eco52I	CGGCCG	2 cut(s)	714, 774
Eco57I	CTGAAG	5 cut(s)	427, 779, 878, 1239, 1335
Eco81I	CCTNAGG	1 cut(s)	87
EcoO109I	RGGNCCY	1 cut(s)	520
EcoRII	CCWGG	2 cut(s)	516, 1171
EcoT14I	CCWWGG	2 cut(s)	615, 1463
EcoT22I	ATGCAT	1 cut(s)	1003
EcoT38I	GRGCYC	1 cut(s)	524
EgeI	GGCGCC	2 cut(s)	613, 885
EheI	GGCGCC	2 cut(s)	613, 885
ErhI	CCWWGG	2 cut(s)	615, 1463
Esp3I	CGTCTC	1 cut(s)	914
FaeI	CATG	4 cut(s)	244, 619, 1396, 1476
FaqI	GGGAC	2 cut(s)	318, 1237
FatI	CATG	4 cut(s)	240, 615, 1392, 1472
FauNDI	CATATG	2 cut(s)	1144, 1405
FbaI	TGATCA	1 cut(s)	747
FokI	GGATG	3 cut(s)	310, 847, 1010
FriOI	GRGCYC	1 cut(s)	524
FspBI	CTAG	2 cut(s)	1227, 1374
GlaI	GCGC	6 cut(s)	476, 600, 613, 726, 885, 1241
GsuI	CTGGAG	2 cut(s)	198, 925
HaeII	RGCGCY	4 cut(s)	478, 615, 728, 887
HaeIII	GGCC	7 cut(s)	206, 507, 522, 716, 731, 776, 1468
HapII	CCGG	4 cut(s)	207, 371, 579, 1381
HhaI	GCGC	6 cut(s)	477, 601, 614, 727, 886, 1242
Hin1I	GRCGYC	3 cut(s)	379, 612, 884
Hin1II	CATG	4 cut(s)	244, 619, 1396, 1476
Hin6I	GCGC	6 cut(s)	475, 599, 612, 725, 884, 1240
HinP1I	GCGC	6 cut(s)	475, 599, 612, 725, 884, 1240
HincII	GTYRAC	2 cut(s)	13, 487
HindII	GTYRAC	2 cut(s)	13, 487
HinfI	GANTC	6 cut(s)	68, 430, 650, 989, 1106, 1310
HpaII	CCGG	4 cut(s)	207, 371, 579, 1381
HphI	GGTGA	2 cut(s)	357, 1144
Hpy166II	GTNNAC	7 cut(s)	13, 31, 487, 671, 869, 1135, 1496
Hpy188I	TCNGA	7 cut(s)	67, 230, 350, 454, 1020, 1153, 1315
Hpy188III	TCNNGA	6 cut(s)	89, 104, 434, 629, 1217, 1430
Hpy8I	GTNNAC	7 cut(s)	13, 31, 487, 671, 869, 1135, 1496
Hpy99I	CGWCG	1 cut(s)	381
HpyAV	CCTTC	5 cut(s)	542, 773, 1063, 1214, 1244
HpyCH4III	ACNGT	2 cut(s)	332, 1277
HpyCH4IV	ACGT	2 cut(s)	379, 923
HpyCH4V	TGCA	6 cut(s)	323, 869, 1001, 1036, 1197, 1350
HpyF10VI	GCNNNNNNNGC	7 cut(s)	513, 549, 722, 737, 866, 881, 1039
HpyF3I	CTNAG	2 cut(s)	87, 227
HpySE526I	ACGT	2 cut(s)	379, 923
Hsp92I	GRCGYC	3 cut(s)	379, 612, 884
Hsp92II	CATG	4 cut(s)	244, 619, 1396, 1476
HspAI	GCGC	6 cut(s)	475, 599, 612, 725, 884, 1240
KasI	GGCGCC	2 cut(s)	611, 883
Ksp22I	TGATCA	1 cut(s)	747
Kzo9I	GATC	5 cut(s)	91, 180, 399, 747, 1087
LmnI	GCTCC	2 cut(s)	754, 1237
Lsp1109I	GCAGC	8 cut(s)	397, 400, 484, 770, 839, 956, 978, 1020
LweI	GCATC	3 cut(s)	332, 988, 1152
MaeI	CTAG	2 cut(s)	1227, 1374
MaeII	ACGT	2 cut(s)	379, 923
MaeIII	GTNAC	2 cut(s)	363, 638
MalI	GATC	5 cut(s)	93, 182, 401, 749, 1089
MboI	GATC	5 cut(s)	91, 180, 399, 747, 1087
MboII	GAAGA	8 cut(s)	30, 124, 130, 870, 884, 914, 1097, 1316
MflI	RGATCY	1 cut(s)	1087
MhlI	GDGCHC	4 cut(s)	151, 498, 524, 871
Mly113I	GGCGCC	2 cut(s)	612, 884
MlyI	GAGTC	4 cut(s)	62, 659, 998, 1115
MmeI	TCCRAC	5 cut(s)	90, 351, 1083, 1131, 1313
Mph1103I	ATGCAT	1 cut(s)	1003
MroXI	GAANNNNTTC	1 cut(s)	1448
MseI	TTAA	3 cut(s)	975, 1004, 1073
MslI	CAYNNNNRTG	2 cut(s)	1062, 1355
MspA1I	CMGCKG	2 cut(s)	969, 1042
MspI	CCGG	4 cut(s)	207, 371, 579, 1381
MspR9I	CCNGG	3 cut(s)	518, 1173, 1382
Mva1269I	GAATGC	1 cut(s)	694
MvaI	CCWGG	2 cut(s)	518, 1173
MvnI	CGCG	2 cut(s)	599, 604
MwoI	GCNNNNNNNGC	7 cut(s)	513, 549, 722, 737, 866, 881, 1039
NarI	GGCGCC	2 cut(s)	612, 884
NciI	CCSGG	1 cut(s)	1382
NcoI	CCATGG	1 cut(s)	615
NdeI	CATATG	2 cut(s)	1144, 1405
NdeII	GATC	5 cut(s)	91, 180, 399, 747, 1087
NlaIII	CATG	4 cut(s)	244, 619, 1396, 1476
NlaIV	GGNNCC	4 cut(s)	352, 522, 613, 885
NmeAIII	GCCGAG	2 cut(s)	517, 742
NmuCI	GTSAC	1 cut(s)	363
NsiI	ATGCAT	1 cut(s)	1003
NspI	RCATGY	1 cut(s)	1396
NspV	TTCGAA	1 cut(s)	900
PceI	AGGCCT	1 cut(s)	1468
PcsI	WCGNNNNNNNCGW	1 cut(s)	489
PctI	GAATGC	1 cut(s)	694
PdmI	GAANNNNTTC	1 cut(s)	1448
PfeI	GAWTC	2 cut(s)	430, 1310
Pfl23II	CGTACG	1 cut(s)	660
PflFI	GACNNNGTC	1 cut(s)	935
PleI	GAGTC	4 cut(s)	62, 658, 997, 1114
PluTI	GGCGCC	2 cut(s)	615, 887
PpsI	GAGTC	4 cut(s)	62, 658, 997, 1114
PshBI	ATTAAT	1 cut(s)	1004
PsiI	TTATAA	1 cut(s)	1413
Psp6I	CCWGG	2 cut(s)	516, 1171
PspGI	CCWGG	2 cut(s)	516, 1171
PspLI	CGTACG	1 cut(s)	660
PspN4I	GGNNCC	4 cut(s)	352, 522, 613, 885
PspOMI	GGGCCC	1 cut(s)	520
PspPI	GGNCC	5 cut(s)	350, 506, 520, 521, 619
PsuI	RGATCY	1 cut(s)	1087
PsyI	GACNNNGTC	1 cut(s)	935
PvuII	CAGCTG	2 cut(s)	969, 1042
RsaI	GTAC	2 cut(s)	662, 683
RsaNI	GTAC	2 cut(s)	661, 682
RseI	CAYNNNNRTG	2 cut(s)	1062, 1355
SaqAI	TTAA	3 cut(s)	975, 1004, 1073
Sau3AI	GATC	5 cut(s)	91, 180, 399, 747, 1087
Sau96I	GGNCC	5 cut(s)	350, 506, 520, 521, 619
SchI	GAGTC	4 cut(s)	62, 659, 998, 1115
ScrFI	CCNGG	3 cut(s)	518, 1173, 1382
SduI	GDGCHC	4 cut(s)	151, 498, 524, 871
SfaNI	GCATC	3 cut(s)	332, 988, 1152
SfcI	CTRYAG	1 cut(s)	1114
SfoI	GGCGCC	2 cut(s)	613, 885
SfuI	TTCGAA	1 cut(s)	900
SinI	GGWCC	2 cut(s)	350, 619
SmiMI	CAYNNNNRTG	2 cut(s)	1062, 1355
SmlI	CTYRAG	1 cut(s)	842
SmoI	CTYRAG	1 cut(s)	842
SseBI	AGGCCT	1 cut(s)	1468
SsiI	CCGC	4 cut(s)	540, 602, 804, 816
SspDI	GGCGCC	2 cut(s)	611, 883
SspMI	CTAG	2 cut(s)	1227, 1374
StuI	AGGCCT	1 cut(s)	1468
StyD4I	CCNGG	3 cut(s)	516, 1171, 1380
StyI	CCWWGG	2 cut(s)	615, 1463
TaaI	ACNGT	2 cut(s)	332, 1277
TaiI	ACGT	2 cut(s)	382, 926
TaqI	TCGA	4 cut(s)	105, 175, 435, 900
TaqII	GACCGA	1 cut(s)	1025
TauI	GCSGC	2 cut(s)	543, 604
TfiI	GAWTC	2 cut(s)	430, 1310
Tru1I	TTAA	3 cut(s)	975, 1004, 1073
Tru9I	TTAA	3 cut(s)	975, 1004, 1073
TscAI	CASTG	4 cut(s)	158, 503, 949, 1282
TseFI	GTSAC	1 cut(s)	363
TseI	GCWGC	8 cut(s)	385, 388, 472, 783, 827, 966, 969, 1033
Tsp45I	GTSAC	1 cut(s)	363
TspDTI	ATGAA	2 cut(s)	294, 1323
TspGWI	ACGGA	2 cut(s)	351, 767
TspRI	CASTG	4 cut(s)	158, 503, 949, 1282
Tth111I	GACNNNGTC	1 cut(s)	935
VneI	GTGCAC	1 cut(s)	867
VpaK11BI	GGWCC	2 cut(s)	350, 619
VspI	ATTAAT	1 cut(s)	1004
XapI	RAATTY	3 cut(s)	118, 464, 1154
XceI	RCATGY	1 cut(s)	1396
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1470
XmnI	GAANNNNTTC	1 cut(s)	1448
XspI	CTAG	2 cut(s)	1227, 1374
ZraI	GACGTC	1 cut(s)	380
Zsp2I	ATGCAT	1 cut(s)	1003

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.