3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G77680 |
| fragaria_vesca | FvH4_2g26510 |
| malus_domestica | MD08G1168200.v1.1 MD15G1353600.v1.1 |
| prunus_persica | Prupe.1G501900_v2.0.a1 Prupe.1G501900_v2.0.a1 Prupe.1G501900_v2.0.a1 Prupe.1G501900_v2.0.a1 Prupe.1G501900_v2.0.a1 Prupe.1G501900_v2.0.a1 |
| pyrus_communis | pycom08g14370 pycom15g31690 pycom15g31710 |
| rosa_chinensis | RchiOBHm_Chr6g0295321 |
| rosa_laevigata | RLG00000011813 |
| rosa_multiflora | Rmu_sc0012530.1_g000002 Rmu_sc0016917.1_g000001 |
| rosa_roxburghii | Rroxscaffold_171G00441480 Rroxscaffold_7G00172580 |
| rosa_rugosa | Rorug06G0250000 |
| rosa_samantha | Rh6AG363200 Rh6BG371300 Rh6CG377800 Rh6DG363900 |
| rosa_wichuraiana | Rw6G031690 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1685 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2262 |
| Acc16I | TGCGCA | 1 cut(s) | 2570 |
| Acc36I | ACCTGC | 2 cut(s) | 1256, 1685 |
| Acc65I | GGTACC | 1 cut(s) | 1236 |
| AccB1I | GGYRCC | 3 cut(s) | 1236, 1801, 2550 |
| AccI | GTMKAC | 1 cut(s) | 3109 |
| AclWI | GGATC | 5 cut(s) | 638, 706, 956, 1000, 1839 |
| AcoI | YGGCCR | 3 cut(s) | 2158, 2278, 2755 |
| AcsI | RAATTY | 7 cut(s) | 1059, 1105, 1735, 1920, 2328, 2582, 3319 |
| AcuI | CTGAAG | 4 cut(s) | 1233, 2357, 2526, 3176 |
| AdeI | CACNNNGTG | 1 cut(s) | 3539 |
| AfaI | GTAC | 7 cut(s) | 196, 885, 1238, 1499, 1704, 2813, 3617 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 859, 1145, 1798, 2134 |
| AflIII | ACRYGT | 2 cut(s) | 3112, 3141 |
| AjiI | CACGTC | 2 cut(s) | 55, 1154 |
| AjnI | CCWGG | 5 cut(s) | 156, 447, 703, 2083, 3358 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1907, 1939, 2216, 2248 |
| AleI | CACNNNNGTG | 1 cut(s) | 3311 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2787, 2819 |
| Alw21I | GWGCWC | 4 cut(s) | 528, 2371, 2676, 3626 |
| Alw26I | GTCTC | 5 cut(s) | 89, 933, 1386, 1386, 2089 |
| AlwI | GGATC | 5 cut(s) | 638, 706, 956, 1000, 1839 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 341, 2504 |
| AoxI | GGCC | 7 cut(s) | 776, 861, 2158, 2278, 2755, 3147, 3409 |
| ApaI | GGGCCC | 1 cut(s) | 3151 |
| ApoI | RAATTY | 7 cut(s) | 1059, 1105, 1735, 1920, 2328, 2582, 3319 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 272, 304 |
| AseI | ATTAAT | 1 cut(s) | 1743 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 3442 |
| Asp718I | GGTACC | 1 cut(s) | 1236 |
| AspLEI | GCGC | 2 cut(s) | 187, 2571 |
| AsuHPI | GGTGA | 7 cut(s) | 136, 693, 824, 1190, 1289, 1709, 2820 |
| AsuII | TTCGAA | 1 cut(s) | 1837 |
| AvaII | GGWCC | 8 cut(s) | 20, 139, 392, 1205, 1543, 3203, 3462, 3590 |
| AxyI | CCTNAGG | 2 cut(s) | 1158, 1806 |
| BaeGI | GKGCMC | 2 cut(s) | 3151, 3376 |
| BalI | TGGCCA | 2 cut(s) | 2280, 2757 |
| BanI | GGYRCC | 3 cut(s) | 1236, 1801, 2550 |
| BanII | GRGCYC | 5 cut(s) | 1151, 2371, 2676, 3151, 3626 |
| BauI | CACGAG | 2 cut(s) | 599, 1459 |
| BbsI | GAAGAC | 2 cut(s) | 1772, 2619 |
| Bbv12I | GWGCWC | 4 cut(s) | 528, 2371, 2676, 3626 |
| BccI | CCATC | 7 cut(s) | 872, 1865, 2145, 2357, 2408, 3274, 3581 |
| BciT130I | CCWGG | 5 cut(s) | 158, 449, 705, 2085, 3360 |
| BciVI | GTATCC | 3 cut(s) | 1946, 2614, 2853 |
| BclI | TGATCA | 2 cut(s) | 534, 1219 |
| BcoDI | GTCTC | 5 cut(s) | 89, 933, 1386, 1386, 2089 |
| BfaI | CTAG | 9 cut(s) | 408, 981, 2001, 2099, 2517, 3105, 3207, 3425, 3637 |
| BfmI | CTRYAG | 2 cut(s) | 2874, 3558 |
| BfoI | RGCGCY | 1 cut(s) | 188 |
| BfuAI | ACCTGC | 2 cut(s) | 1256, 1685 |
| BfuI | GTATCC | 3 cut(s) | 1946, 2614, 2853 |
| BglII | AGATCT | 2 cut(s) | 2174, 2306 |
| BlpI | GCTNAGC | 2 cut(s) | 47, 915 |
| Bme1390I | CCNGG | 5 cut(s) | 158, 449, 705, 2085, 3360 |
| Bme18I | GGWCC | 8 cut(s) | 20, 139, 392, 1205, 1543, 3203, 3462, 3590 |
| BmgBI | CACGTC | 2 cut(s) | 55, 1154 |
| BmiI | GGNNCC | 7 cut(s) | 1238, 1803, 2552, 3149, 3463, 3464, 3481 |
| BmrFI | CCNGG | 5 cut(s) | 158, 449, 705, 2085, 3360 |
| BmsI | GCATC | 9 cut(s) | 58, 551, 787, 805, 1487, 1879, 2869, 3112, 3286 |
| BpiI | GAAGAC | 2 cut(s) | 1772, 2619 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 86, 118, 733, 765, 1133, 1165 |
| BpmI | CTGGAG | 1 cut(s) | 824 |
| Bpu10I | CCTNAGC | 2 cut(s) | 967, 2205 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 47, 915 |
| Bpu14I | TTCGAA | 1 cut(s) | 1837 |
| BpuEI | CTTGAG | 4 cut(s) | 335, 878, 1647, 2660 |
| Bsa29I | ATCGAT | 2 cut(s) | 3498, 3502 |
| BsaI | GGTCTC | 2 cut(s) | 89, 1386 |
| BsaJI | CCNNGG | 8 cut(s) | 102, 704, 1174, 1242, 1793, 1980, 2083, 3390 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 859, 1145, 1798, 2134 |
| Bse1I | ACTGG | 6 cut(s) | 779, 1026, 1234, 1357, 2971, 3439 |
| Bse21I | CCTNAGG | 2 cut(s) | 1158, 1806 |
| Bse3DI | GCAATG | 4 cut(s) | 563, 1941, 2651, 3094 |
| BseBI | CCWGG | 5 cut(s) | 158, 449, 705, 2085, 3360 |
| BseCI | ATCGAT | 2 cut(s) | 3498, 3502 |
| BseDI | CCNNGG | 8 cut(s) | 102, 704, 1174, 1242, 1793, 1980, 2083, 3390 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 859, 1145, 1798, 2134 |
| BseMI | GCAATG | 4 cut(s) | 563, 1941, 2651, 3094 |
| BseNI | ACTGG | 6 cut(s) | 779, 1026, 1234, 1357, 2971, 3439 |
| BseRI | GAGGAG | 8 cut(s) | 91, 717, 1374, 1650, 1776, 2365, 2486, 2906 |
| BseSI | GKGCMC | 2 cut(s) | 3151, 3376 |
| BseYI | CCCAGC | 2 cut(s) | 998, 3458 |
| BsgI | GTGCAG | 3 cut(s) | 629, 1002, 3219 |
| Bsh1285I | CGRYCG | 1 cut(s) | 3502 |
| BshFI | GGCC | 7 cut(s) | 778, 863, 2160, 2280, 2757, 3149, 3411 |
| BshNI | GGYRCC | 3 cut(s) | 1236, 1801, 2550 |
| BshVI | ATCGAT | 2 cut(s) | 3498, 3502 |
| BsiEI | CGRYCG | 1 cut(s) | 3502 |
| BsiHKAI | GWGCWC | 4 cut(s) | 528, 2371, 2676, 3626 |
| BslFI | GGGAC | 2 cut(s) | 1015, 3475 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 859, 1145, 1798, 2134 |
| BsmAI | GTCTC | 5 cut(s) | 89, 933, 1386, 1386, 2089 |
| BsmFI | GGGAC | 2 cut(s) | 1015, 3475 |
| BsmI | GAATGC | 4 cut(s) | 511, 628, 1684, 2539 |
| BsnI | GGCC | 7 cut(s) | 778, 863, 2160, 2280, 2757, 3149, 3411 |
| Bso31I | GGTCTC | 2 cut(s) | 89, 1386 |
| Bsp119I | TTCGAA | 1 cut(s) | 1837 |
| Bsp120I | GGGCCC | 1 cut(s) | 3147 |
| Bsp1286I | GDGCHC | 7 cut(s) | 528, 1151, 2371, 2676, 3151, 3376, 3626 |
| Bsp1407I | TGTACA | 2 cut(s) | 2811, 3615 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 47, 915 |
| Bsp19I | CCATGG | 1 cut(s) | 1793 |
| BspANI | GGCC | 7 cut(s) | 778, 863, 2160, 2280, 2757, 3149, 3411 |
| BspDI | ATCGAT | 2 cut(s) | 3498, 3502 |
| BspHI | TCATGA | 2 cut(s) | 1762, 2323 |
| BspLI | GGNNCC | 7 cut(s) | 1238, 1803, 2552, 3149, 3463, 3464, 3481 |
| BspMAI | CTGCAG | 1 cut(s) | 2878 |
| BspMI | ACCTGC | 2 cut(s) | 1256, 1685 |
| BspPI | GGATC | 5 cut(s) | 638, 706, 956, 1000, 1839 |
| BspQI | GCTCTTC | 2 cut(s) | 2376, 2664 |
| BspT104I | TTCGAA | 1 cut(s) | 1837 |
| BspT107I | GGYRCC | 3 cut(s) | 1236, 1801, 2550 |
| BspTNI | GGTCTC | 2 cut(s) | 89, 1386 |
| BsrDI | GCAATG | 4 cut(s) | 563, 1941, 2651, 3094 |
| BsrGI | TGTACA | 2 cut(s) | 2811, 3615 |
| BsrI | ACTGG | 6 cut(s) | 779, 1026, 1234, 1357, 2971, 3439 |
| BssECI | CCNNGG | 8 cut(s) | 102, 704, 1174, 1242, 1793, 1980, 2083, 3390 |
| BssSI | CACGAG | 2 cut(s) | 599, 1459 |
| BssT1I | CCWWGG | 5 cut(s) | 1174, 1242, 1793, 1980, 3390 |
| Bst2BI | CACGAG | 2 cut(s) | 599, 1459 |
| Bst2UI | CCWGG | 5 cut(s) | 158, 449, 705, 2085, 3360 |
| Bst4CI | ACNGT | 4 cut(s) | 1399, 2167, 2566, 3310 |
| Bst6I | CTCTTC | 3 cut(s) | 30, 2376, 2664 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 341, 2653 |
| BstAUI | TGTACA | 2 cut(s) | 2811, 3615 |
| BstBI | TTCGAA | 1 cut(s) | 1837 |
| BstC8I | GCNNGC | 6 cut(s) | 1692, 2186, 2190, 3066, 3102, 3237 |
| BstDSI | CCRYGG | 1 cut(s) | 1793 |
| BstH2I | RGCGCY | 1 cut(s) | 188 |
| BstHHI | GCGC | 2 cut(s) | 187, 2571 |
| BstMAI | GTCTC | 5 cut(s) | 89, 933, 1386, 1386, 2089 |
| BstMCI | CGRYCG | 1 cut(s) | 3502 |
| BstNI | CCWGG | 5 cut(s) | 158, 449, 705, 2085, 3360 |
| BstNSI | RCATGY | 6 cut(s) | 511, 914, 2204, 2437, 3116, 3145 |
| BstSCI | CCNGG | 5 cut(s) | 156, 447, 703, 2083, 3358 |
| BstSFI | CTRYAG | 2 cut(s) | 2874, 3558 |
| BstSLI | GKGCMC | 2 cut(s) | 3151, 3376 |
| BstV2I | GAAGAC | 2 cut(s) | 1772, 2619 |
| BstX2I | RGATCY | 3 cut(s) | 1831, 2174, 2306 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3473 |
| BstYI | RGATCY | 3 cut(s) | 1831, 2174, 2306 |
| Bsu15I | ATCGAT | 2 cut(s) | 3498, 3502 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1158, 1806 |
| BsuI | GTATCC | 3 cut(s) | 1946, 2614, 2853 |
| BsuRI | GGCC | 7 cut(s) | 778, 863, 2160, 2280, 2757, 3149, 3411 |
| BsuTUI | ATCGAT | 2 cut(s) | 3498, 3502 |
| BtgI | CCRYGG | 1 cut(s) | 1793 |
| BtgZI | GCGATG | 2 cut(s) | 1608, 2846 |
| BtrI | CACGTC | 2 cut(s) | 55, 1154 |
| BtsI | GCAGTG | 4 cut(s) | 241, 1869, 2831, 3533 |
| BveI | ACCTGC | 2 cut(s) | 1256, 1685 |
| Cac8I | GCNNGC | 6 cut(s) | 1692, 2186, 2190, 3066, 3102, 3237 |
| CaiI | CAGNNNCTG | 2 cut(s) | 341, 2504 |
| CciI | TCATGA | 2 cut(s) | 1762, 2323 |
| CfoI | GCGC | 2 cut(s) | 187, 2571 |
| ClaI | ATCGAT | 2 cut(s) | 3498, 3502 |
| CseI | GACGC | 3 cut(s) | 2825, 3236, 3345 |
| Csp6I | GTAC | 7 cut(s) | 195, 884, 1237, 1498, 1703, 2812, 3616 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1521, 1556 |
| CviQI | GTAC | 7 cut(s) | 195, 884, 1237, 1498, 1703, 2812, 3616 |
| DraIII | CACNNNGTG | 1 cut(s) | 3539 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2262 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2262 |
| EaeI | YGGCCR | 3 cut(s) | 2158, 2278, 2755 |
| Eam1104I | CTCTTC | 3 cut(s) | 30, 2376, 2664 |
| EarI | CTCTTC | 3 cut(s) | 30, 2376, 2664 |
| EciI | GGCGGA | 1 cut(s) | 3444 |
| Ecl136II | GAGCTC | 3 cut(s) | 2369, 2674, 3624 |
| Eco130I | CCWWGG | 5 cut(s) | 1174, 1242, 1793, 1980, 3390 |
| Eco147I | AGGCCT | 1 cut(s) | 863 |
| Eco24I | GRGCYC | 5 cut(s) | 1151, 2371, 2676, 3151, 3626 |
| Eco31I | GGTCTC | 2 cut(s) | 89, 1386 |
| Eco47I | GGWCC | 8 cut(s) | 20, 139, 392, 1205, 1543, 3203, 3462, 3590 |
| Eco53kI | GAGCTC | 3 cut(s) | 2369, 2674, 3624 |
| Eco57I | CTGAAG | 4 cut(s) | 1233, 2357, 2526, 3176 |
| Eco81I | CCTNAGG | 2 cut(s) | 1158, 1806 |
| EcoICRI | GAGCTC | 3 cut(s) | 2369, 2674, 3624 |
| EcoO109I | RGGNCCY | 4 cut(s) | 20, 3148, 3203, 3462 |
| EcoRII | CCWGG | 5 cut(s) | 156, 447, 703, 2083, 3358 |
| EcoT14I | CCWWGG | 5 cut(s) | 1174, 1242, 1793, 1980, 3390 |
| EcoT22I | ATGCAT | 3 cut(s) | 513, 1480, 2539 |
| EcoT38I | GRGCYC | 5 cut(s) | 1151, 2371, 2676, 3151, 3626 |
| ErhI | CCWWGG | 5 cut(s) | 1174, 1242, 1793, 1980, 3390 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 381, 413 |
| FaqI | GGGAC | 2 cut(s) | 1015, 3475 |
| FauI | CCCGC | 1 cut(s) | 1683 |
| FauNDI | CATATG | 2 cut(s) | 520, 2425 |
| FbaI | TGATCA | 2 cut(s) | 534, 1219 |
| FblI | GTMKAC | 1 cut(s) | 3109 |
| FriOI | GRGCYC | 5 cut(s) | 1151, 2371, 2676, 3151, 3626 |
| FspBI | CTAG | 9 cut(s) | 408, 981, 2001, 2099, 2517, 3105, 3207, 3425, 3637 |
| FspI | TGCGCA | 1 cut(s) | 2570 |
| GlaI | GCGC | 2 cut(s) | 186, 2570 |
| GsaI | CCCAGC | 2 cut(s) | 1002, 3462 |
| GsuI | CTGGAG | 1 cut(s) | 824 |
| HaeII | RGCGCY | 1 cut(s) | 188 |
| HaeIII | GGCC | 7 cut(s) | 778, 863, 2160, 2280, 2757, 3149, 3411 |
| HgaI | GACGC | 3 cut(s) | 2825, 3236, 3345 |
| HhaI | GCGC | 2 cut(s) | 187, 2571 |
| Hin6I | GCGC | 2 cut(s) | 185, 2569 |
| HinP1I | GCGC | 2 cut(s) | 185, 2569 |
| HincII | GTYRAC | 3 cut(s) | 270, 595, 2146 |
| HindII | GTYRAC | 3 cut(s) | 270, 595, 2146 |
| HindIII | AAGCTT | 2 cut(s) | 2186, 3233 |
| HphI | GGTGA | 7 cut(s) | 136, 693, 824, 1190, 1289, 1709, 2820 |
| Hpy166II | GTNNAC | 9 cut(s) | 270, 374, 478, 595, 884, 2146, 2814, 3110, 3306 |
| Hpy8I | GTNNAC | 9 cut(s) | 270, 374, 478, 595, 884, 2146, 2814, 3110, 3306 |
| Hpy99I | CGWCG | 5 cut(s) | 56, 1392, 2841, 2913, 3252 |
| HpyCH4III | ACNGT | 4 cut(s) | 1399, 2167, 2566, 3310 |
| HpyCH4IV | ACGT | 7 cut(s) | 54, 1153, 2624, 2825, 2867, 2908, 3302 |
| HpySE526I | ACGT | 7 cut(s) | 54, 1153, 2624, 2825, 2867, 2908, 3302 |
| HspAI | GCGC | 2 cut(s) | 185, 2569 |
| KflI | GGGWCCC | 1 cut(s) | 3462 |
| KpnI | GGTACC | 1 cut(s) | 1240 |
| Ksp22I | TGATCA | 2 cut(s) | 534, 1219 |
| LguI | GCTCTTC | 2 cut(s) | 2376, 2664 |
| LmnI | GCTCC | 4 cut(s) | 1663, 2366, 2390, 3479 |
| LweI | GCATC | 9 cut(s) | 58, 551, 787, 805, 1487, 1879, 2869, 3112, 3286 |
| MaeI | CTAG | 9 cut(s) | 408, 981, 2001, 2099, 2517, 3105, 3207, 3425, 3637 |
| MaeII | ACGT | 7 cut(s) | 54, 1153, 2624, 2825, 2867, 2908, 3302 |
| MaeIII | GTNAC | 4 cut(s) | 1225, 2022, 2786, 2826 |
| MfeI | CAATTG | 1 cut(s) | 1899 |
| MflI | RGATCY | 3 cut(s) | 1831, 2174, 2306 |
| MhlI | GDGCHC | 7 cut(s) | 528, 1151, 2371, 2676, 3151, 3376, 3626 |
| MlsI | TGGCCA | 2 cut(s) | 2280, 2757 |
| MluNI | TGGCCA | 2 cut(s) | 2280, 2757 |
| MlyI | GAGTC | 5 cut(s) | 751, 846, 1607, 2447, 2678 |
| MmeI | TCCRAC | 7 cut(s) | 276, 286, 392, 883, 2598, 2891, 3556 |
| Mox20I | TGGCCA | 2 cut(s) | 2280, 2757 |
| Mph1103I | ATGCAT | 3 cut(s) | 513, 1480, 2539 |
| MroXI | GAANNNNTTC | 1 cut(s) | 3442 |
| MscI | TGGCCA | 2 cut(s) | 2280, 2757 |
| MslI | CAYNNNNRTG | 4 cut(s) | 582, 603, 1505, 3311 |
| Msp20I | TGGCCA | 2 cut(s) | 2280, 2757 |
| MspA1I | CMGCKG | 5 cut(s) | 175, 998, 2029, 2501, 3515 |
| MspR9I | CCNGG | 5 cut(s) | 158, 449, 705, 2085, 3360 |
| MunI | CAATTG | 1 cut(s) | 1899 |
| Mva1269I | GAATGC | 4 cut(s) | 511, 628, 1684, 2539 |
| MvaI | CCWGG | 5 cut(s) | 158, 449, 705, 2085, 3360 |
| NcoI | CCATGG | 1 cut(s) | 1793 |
| NdeI | CATATG | 2 cut(s) | 520, 2425 |
| NlaIV | GGNNCC | 7 cut(s) | 1238, 1803, 2552, 3149, 3463, 3464, 3481 |
| NmuCI | GTSAC | 4 cut(s) | 1225, 2022, 2786, 2826 |
| NsbI | TGCGCA | 1 cut(s) | 2570 |
| NsiI | ATGCAT | 3 cut(s) | 513, 1480, 2539 |
| NspI | RCATGY | 6 cut(s) | 511, 914, 2204, 2437, 3116, 3145 |
| NspV | TTCGAA | 1 cut(s) | 1837 |
| OliI | CACNNNNGTG | 1 cut(s) | 3311 |
| PagI | TCATGA | 2 cut(s) | 1762, 2323 |
| PaqCI | CACCTGC | 1 cut(s) | 1685 |
| PceI | AGGCCT | 1 cut(s) | 863 |
| PciI | ACATGT | 2 cut(s) | 3112, 3141 |
| PciSI | GCTCTTC | 2 cut(s) | 2376, 2664 |
| PctI | GAATGC | 4 cut(s) | 511, 628, 1684, 2539 |
| PdmI | GAANNNNTTC | 1 cut(s) | 3442 |
| PfeI | GAWTC | 8 cut(s) | 338, 1181, 1253, 1565, 1766, 2661, 2996, 3210 |
| PfoI | TCCNGGA | 1 cut(s) | 156 |
| Ple19I | CGATCG | 1 cut(s) | 3502 |
| PleI | GAGTC | 5 cut(s) | 750, 845, 1606, 2447, 2678 |
| PpsI | GAGTC | 5 cut(s) | 750, 845, 1606, 2447, 2678 |
| PpuMI | RGGWCCY | 3 cut(s) | 20, 3203, 3462 |
| PscI | ACATGT | 2 cut(s) | 3112, 3141 |
| PshBI | ATTAAT | 1 cut(s) | 1743 |
| Psp124BI | GAGCTC | 3 cut(s) | 2371, 2676, 3626 |
| Psp5II | RGGWCCY | 3 cut(s) | 20, 3203, 3462 |
| Psp6I | CCWGG | 5 cut(s) | 156, 447, 703, 2083, 3358 |
| PspFI | CCCAGC | 2 cut(s) | 998, 3458 |
| PspGI | CCWGG | 5 cut(s) | 156, 447, 703, 2083, 3358 |
| PspN4I | GGNNCC | 7 cut(s) | 1238, 1803, 2552, 3149, 3463, 3464, 3481 |
| PspOMI | GGGCCC | 1 cut(s) | 3147 |
| PspPPI | RGGWCCY | 3 cut(s) | 20, 3203, 3462 |
| PstI | CTGCAG | 1 cut(s) | 2878 |
| PstNI | CAGNNNCTG | 2 cut(s) | 341, 2504 |
| PsuI | RGATCY | 3 cut(s) | 1831, 2174, 2306 |
| PvuI | CGATCG | 1 cut(s) | 3502 |
| PvuII | CAGCTG | 3 cut(s) | 175, 998, 3515 |
| RsaI | GTAC | 7 cut(s) | 196, 885, 1238, 1499, 1704, 2813, 3617 |
| RsaNI | GTAC | 7 cut(s) | 195, 884, 1237, 1498, 1703, 2812, 3616 |
| RseI | CAYNNNNRTG | 4 cut(s) | 582, 603, 1505, 3311 |
| SacI | GAGCTC | 3 cut(s) | 2371, 2676, 3626 |
| SapI | GCTCTTC | 2 cut(s) | 2376, 2664 |
| SchI | GAGTC | 5 cut(s) | 751, 846, 1607, 2447, 2678 |
| ScrFI | CCNGG | 5 cut(s) | 158, 449, 705, 2085, 3360 |
| SduI | GDGCHC | 7 cut(s) | 528, 1151, 2371, 2676, 3151, 3376, 3626 |
| SfaNI | GCATC | 9 cut(s) | 58, 551, 787, 805, 1487, 1879, 2869, 3112, 3286 |
| SfcI | CTRYAG | 2 cut(s) | 2874, 3558 |
| SfuI | TTCGAA | 1 cut(s) | 1837 |
| SinI | GGWCC | 8 cut(s) | 20, 139, 392, 1205, 1543, 3203, 3462, 3590 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 582, 603, 1505, 3311 |
| SmlI | CTYRAG | 4 cut(s) | 314, 857, 1662, 2675 |
| SmoI | CTYRAG | 4 cut(s) | 314, 857, 1662, 2675 |
| SseBI | AGGCCT | 1 cut(s) | 863 |
| SspI | AATATT | 3 cut(s) | 874, 2701, 2919 |
| SspMI | CTAG | 9 cut(s) | 408, 981, 2001, 2099, 2517, 3105, 3207, 3425, 3637 |
| SstI | GAGCTC | 3 cut(s) | 2371, 2676, 3626 |
| StuI | AGGCCT | 1 cut(s) | 863 |
| StyD4I | CCNGG | 5 cut(s) | 156, 447, 703, 2083, 3358 |
| StyI | CCWWGG | 5 cut(s) | 1174, 1242, 1793, 1980, 3390 |
| TaaI | ACNGT | 4 cut(s) | 1399, 2167, 2566, 3310 |
| TaiI | ACGT | 7 cut(s) | 57, 1156, 2627, 2828, 2870, 2911, 3305 |
| TaqII | GACCGA | 1 cut(s) | 2163 |
| TatI | WGTACW | 4 cut(s) | 1497, 1702, 2811, 3615 |
| TauI | GCSGC | 3 cut(s) | 79, 2163, 2504 |
| TfiI | GAWTC | 8 cut(s) | 338, 1181, 1253, 1565, 1766, 2661, 2996, 3210 |
| TseFI | GTSAC | 4 cut(s) | 1225, 2022, 2786, 2826 |
| Tsp45I | GTSAC | 4 cut(s) | 1225, 2022, 2786, 2826 |
| TspGWI | ACGGA | 2 cut(s) | 543, 905 |
| VpaK11BI | GGWCC | 8 cut(s) | 20, 139, 392, 1205, 1543, 3203, 3462, 3590 |
| VspI | ATTAAT | 1 cut(s) | 1743 |
| XapI | RAATTY | 7 cut(s) | 1059, 1105, 1735, 1920, 2328, 2582, 3319 |
| XbaI | TCTAGA | 2 cut(s) | 2000, 2516 |
| XceI | RCATGY | 6 cut(s) | 511, 914, 2204, 2437, 3116, 3145 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3473 |
| XmiI | GTMKAC | 1 cut(s) | 3109 |
| XmnI | GAANNNNTTC | 1 cut(s) | 3442 |
| XspI | CTAG | 9 cut(s) | 408, 981, 2001, 2099, 2517, 3105, 3207, 3425, 3637 |
| Zsp2I | ATGCAT | 3 cut(s) | 513, 1480, 2539 |