Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0008002

Physical Location & Seq

Genomic Coordinates Reverse (-)

36871018 .. 36882883

Gene Structure 11866 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2994 bp

ATGAAAGAAAATTGCATGCAGCCCTTCTTTGTCTTCCAGGTCTTCTGTGTGGGTCTCTGGTGTTTGGATGAATATTGGTATTACAGTTTGTTCACACTTTTTATGCTGTTTATGTTCGAGTCAACAATGGCTAAAAGTCAGTTGAAGACTCTTAGTGAGCTAAGACGTGTCAGAGTGGATAACCAGACCCTCATGGTACATCGCTGTGGGAAGTGGATAAGGCTTGCTGGAACTGATCTTTTGCCCGGTGATGTTGTTTCTATTGGGCGAGCTTCTGGTCCAAATGGAGAAGATAGGGCTGTGCCAGCGGATATGCTTCTATTAGCTGGAAGCGCTATTGTCAATGAAGCCATTCTCACAGGCGAGTCTACTCCCCAATGGAAGGTATCGATCATGGCCCGAGGAACTGAGGAGAAATTATCAGCTAAGCGAGATAAAAGCCATGTCTTATTTGGTGGGACTAAGATATTGCAGCATACTCCGGATAAGGGCTTTCCTTTAAAAACCCCTGATGGTGGCTGTGTGGCTGTTGTTCTGAGGACTGGGTTTGAAACAAGTCAGGGGAAACTTATGCGTACAATTTTGTTTTCTACAGAGAGGGTTACAGCTAACAGCTGGGAAAGTGGGTTGTTCATTTTGTTCTTGGTCATATTTGCAGTGATAGCTGCTGGTTATGTACTAAAGAAGGGGCTTGAGGATCCCACTAGGAGCAAGTACAAACTTTTCCTTAGTTGTTCACTCATTATTACTTCTGTGATTCCTCCTGAGCTGCCAATGGAATTATCTATAGCTGTTAATACATCTCTGATTGCTCTTGCACGTCGCGGAATATTTTGTACCGAACCTTTCCGAATTCCTTTTGCTGGAAAGGTTGATATCTGCTGTTTTGACAAAACTGGAACACTTACATCAGACGATATGGAGTTCTGTGGAGTTGTTGGGTCAACTAGCAGTACAGATTTAGAAGCTGACATGAGTAACGTGCCTGTGCGCACAGCAGAGATTTTGGCGTCTTGCCATGCCTTGGTGTTTGTGGATAATAAGCTGGTTGGTGATCCTCTTGAAAAGGCTGCCCTTAAAGGAATAGATTGGACCTTCAAATCTGATGAGAAGGCAATGCCAAAAAAGGGAAGTGGTCATGCTGTGCTGATTGTTCAGAGACATCACTTTGCTTCCTACTTGAAAAGAATGGCAGTTGTAGTGCGCATTGAAGAGAATTTTTTTGCTTTTGTGAAGGGTGCCCCTGAAACCATTCAGGGTAGACTCACTGAAGTGCCATCATTTTATGTCGAAACTTACAAGAAATTTACTCGACAAGGGTCTCGCGTTCTGGCCCTTGCCTACAAATCTCTTCCTGACATGACAGTTAGCGAAGCTAGAAGCTTGGATAGGGATGTGGTGGAGAGTGGCCTTACCTTTGCTGGTTTTGCGGTTTTTAACTGTCCTATTAGATCAGATTCAGCCGCTATTTTATCTGAGCTTAAACGATCCTCGCATGACTTGGTGATGATTACTGGTGATCAGGCTCTGACAGCTTGCCATGTTGCTAGCCAAGTTCATATTATTTCAAAATCAGCATTAATTCTTGGTCCAAAGAGGGACAGTGAAGGATATGAGTGGATATCTCCTGATGAGACTCAGATGATTCCTTACAATGAAAACGAGGTGGAAGCTTTGTCTGAGACTCATGATCTCTGTATTGGTGGTGACTGCTTTGAAATGTTGCTACAAACCTCAGCTGTTATACGAGTCATTCCATACGTCAAGGTTTATGCGAGAGTTGCTCCTGAACAGAAGGAGCTGATTTTGACTACCTTCAAAACAGTGGGGAGGATAACGTTGATGTGTGGGGATGGAACCAATGACGTTGGAGCGTTGAAGCAGGCCCATGTGGGAGTTGCGCTATTGAATGCAGTGCCTCCAAGTCAGAGTGGAAAGCCGCCCAGTGAAACGTCTAAAGAGCCAAAGAAGTCCAAGTCTGCATTGGATGTTGCAGGTAAATCTACTAGTGTAAATAGAGAAGTCTCTTCAAAGGGAAAAGCCACCGCAAAATTGGATCCCAATAGCAACCCAGCTGGTAACCGGAATCTGTCGGCTGCCGAGTTGAAACGACAGAAGCTAGCTTCATTGCAAAAGAGACTAATGGATGAGATGAATGAGGAGGGGGATGGTCGCTCAGCTCCAATTGTAAAGCTTGGAGATGCTTCCATGGCATCACCATTCACAGCGAAGCATGCATCGGTTGCGCCGACCACTGACATAATTCGTCAAGGTCGCAGTACTCTGGTGACTACACTCCAGATGTTTAAAATACTAGGCCTCAACTGCCTCGCGACAGCTTATGTGCTGAGTGTTATGTACTTGGATGGTGTCAAGCTGGGTGATGTGCAGGCTACTATCAGCGGTGTGTTTACAGCTGCCTTTTTCCTATTCATCTCACATGCACGCCCTCTTCCAACCCTTTCAGCTGAACGGCCTCATCCGAATGTCTTCTGCTCCTATGTCTTTCTTTCTCTGTTGGGACAGTTTGCAATCCACTTATTTTTCTTGATATCTTCTGTGAACGAGGCTGAGAGATACATGCCGGACGAGTGCATTGAACCAGACTCTGATTTTCATCCCAACCTTGTAAATACAGTCTCGTACATGGTGAGCATGATGCTACAGGTGGCCACCTTTGCTGTGAACTACATGGGGCATCCGTTCAATCAGAGCGTCACAGAAAACAAGCCATTCTTGTATGCGATCGTGGCTGCGGCTGGTTTCTTCACGGTTATCACATCTGATCTATTTAGGGACTTGAATGACTGGCTTAGGCTGGTGCCCTTGCCAGTCGGATTGAGAAACAAGTTACTGTTATGGGCTCTTCTCATGTTTTTGACCTGCTACTCTTGGGAGAAATTTTTGCGGTGGGCATTCCCGGGCAAGATTCCAGCCTGGAAGAAGCGACAACGGATTGCTGCTTCCAGTCTCGAGAAGAAGAAACAACTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase E1-E2_ATPase Hydrolase

Protein Analysis

998

Amino Acids

109.99

Weight (kDa)

8.55

Isoelectric Point (pI)

39.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
E1-E2_ATPase	PF00122	65 - 193	6.7e-12	P-type ATPase actuator domain
Cation_ATPase	PF13246	348 - 485	5.5e-09	P-type ATPase, cytoplasmic domain N

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008002)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G23630
fragaria_vesca	FvH4_5g30560 FvH4_5g30560 FvH4_5g30560 FvH4_5g30560
malus_domestica	MD08G1222500.v1.1 MD15G1415900.v1.1
prunus_persica	Prupe.1G560300_v2.0.a1 Prupe.1G560300_v2.0.a1
pyrus_communis	pycom08g19340 pycom15g36910
rosa_chinensis	RchiOBHm_Chr7g0225451
rosa_laevigata	RLG00000001818 RLG00000001819
rosa_multiflora	Rmu_co8033688.1_g000001 Rmu_sc0000259.1_g000014 Rmu_sc0000259.1_g000015
rosa_roxburghii	Rroxscaffold_3G00233810
rosa_rugosa	Rorug07G0229400
rosa_samantha	Rh7AG373800 Rh7BG364200 Rh7CG392100 Rh7DG375400
rosa_wichuraiana	Rw7G031670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	992, 1205
Acc36I	ACCTGC	2 cut(s)	1985, 2891
AccB1I	GGYRCC	2 cut(s)	1238, 2821
AccB7I	CCANNNNNTGG	1 cut(s)	1024
AccI	GTMKAC	2 cut(s)	368, 1261
AccII	CGCG	3 cut(s)	825, 1326, 2333
AccIII	TCCGGA	1 cut(s)	481
AciI	CCGC	9 cut(s)	308, 825, 1430, 1464, 1940, 2046, 2403, 2756, 2908
AclI	AACGTT	1 cut(s)	1838
AclWI	GGATC	6 cut(s)	692, 705, 1049, 1482, 2051, 2064
AcoI	YGGCCR	1 cut(s)	2670
AcsI	RAATTY	4 cut(s)	852, 1216, 1304, 2900
AcuI	CTGAAG	1 cut(s)	1290
AcyI	GRCGYC	1 cut(s)	1010
AfaI	GTAC	9 cut(s)	198, 577, 678, 716, 838, 955, 2281, 2360, 2645
AfeI	AGCGCT	1 cut(s)	334
AfiI	CCNNNNNNNGG	6 cut(s)	382, 488, 515, 863, 1024, 1127
AflIII	ACRYGT	1 cut(s)	166
AhlI	ACTAGT	1 cut(s)	2006
AjiI	CACGTC	2 cut(s)	167, 821
AjnI	CCWGG	2 cut(s)	36, 2936
AleI	CACNNNNGTG	1 cut(s)	1271
Alw26I	GTCTC	9 cut(s)	59, 1153, 1326, 1628, 1676, 2029, 2131, 2644, 2975
AlwI	GGATC	6 cut(s)	692, 705, 1049, 1482, 2051, 2064
AlwNI	CAGNNNCTG	2 cut(s)	1528, 2609
Ama87I	CYCGRG	3 cut(s)	399, 2920, 2972
Aor13HI	TCCGGA	1 cut(s)	481
Aor51HI	AGCGCT	1 cut(s)	334
AoxI	GGCC	7 cut(s)	396, 1332, 1408, 1884, 2317, 2474, 2670
ApeKI	GCWGC	9 cut(s)	19, 472, 665, 769, 1070, 2096, 2417, 2753, 2960
ApoI	RAATTY	4 cut(s)	852, 1216, 1304, 2900
AseI	ATTAAT	1 cut(s)	1580
Asp700I	GAANNNNTTC	3 cut(s)	351, 1251, 2489
AspLEI	GCGC	5 cut(s)	335, 993, 1206, 1903, 2248
AspS9I	GGNCC	6 cut(s)	278, 397, 1092, 1333, 1589, 1885
AsuC2I	CCSGG	3 cut(s)	246, 2921, 2922
AsuHPI	GGTGA	9 cut(s)	260, 1064, 1516, 1529, 1718, 2208, 2299, 2393, 2662
AsuNHI	GCTAGC	2 cut(s)	1547, 2119
AvaI	CYCGRG	3 cut(s)	399, 2920, 2972
AvaII	GGWCC	3 cut(s)	278, 1092, 1589
BaeGI	GKGCMC	2 cut(s)	1243, 2826
BalI	TGGCCA	1 cut(s)	2672
BamHI	GGATCC	2 cut(s)	697, 2056
BanI	GGYRCC	2 cut(s)	1238, 2821
BanII	GRGCYC	1 cut(s)	2866
BbsI	GAAGAC	4 cut(s)	25, 34, 152, 2482
BbvCI	CCTCAGC	1 cut(s)	1735
BbvI	GCAGC	9 cut(s)	31, 484, 652, 756, 1057, 2083, 2404, 2740, 2947
BccI	CCATC	5 cut(s)	506, 1285, 1847, 2162, 2360
BceAI	ACGGC	1 cut(s)	2489
BciT130I	CCWGG	2 cut(s)	38, 2938
BclI	TGATCA	1 cut(s)	1519
BcnI	CCSGG	3 cut(s)	246, 2921, 2922
BcoDI	GTCTC	9 cut(s)	59, 1153, 1326, 1628, 1676, 2029, 2131, 2644, 2975
BcuI	ACTAGT	1 cut(s)	2006
BfaI	CTAG	7 cut(s)	705, 948, 1377, 1548, 2007, 2120, 2315
BfmI	CTRYAG	3 cut(s)	591, 786, 2663
BfoI	RGCGCY	1 cut(s)	336
BfuAI	ACCTGC	2 cut(s)	1985, 2891
BlpI	GCTNAGC	2 cut(s)	426, 2176
BmcAI	AGTACT	1 cut(s)	2281
Bme1390I	CCNGG	5 cut(s)	38, 246, 2921, 2922, 2938
Bme18I	GGWCC	3 cut(s)	278, 1092, 1589
BmeT110I	CYCGRG	3 cut(s)	399, 2920, 2972
BmgBI	CACGTC	2 cut(s)	167, 821
BmgT120I	GGNCC	6 cut(s)	278, 397, 1092, 1333, 1589, 1885
BmiI	GGNNCC	5 cut(s)	699, 1240, 1858, 2058, 2823
BmrFI	CCNGG	5 cut(s)	38, 246, 2921, 2922, 2938
BmrI	ACTGGG	2 cut(s)	552, 1938
BmsI	GCATC	5 cut(s)	2191, 2222, 2246, 2649, 2707
BmtI	GCTAGC	2 cut(s)	1551, 2123
BmuI	ACTGGG	2 cut(s)	552, 1938
BoxI	GACNNNNGTC	1 cut(s)	1318
BpiI	GAAGAC	4 cut(s)	25, 34, 152, 2482
BplI	GAGNNNNNCTC	2 cut(s)	1768, 1800
BpmI	CTGGAG	1 cut(s)	2282
Bpu10I	CCTNAGC	3 cut(s)	765, 1735, 2813
Bpu1102I	GCTNAGC	2 cut(s)	426, 2176
BpuEI	CTTGAG	1 cut(s)	713
BpuMI	CCSGG	3 cut(s)	246, 2921, 2922
Bsa29I	ATCGAT	1 cut(s)	389
BsaBI	GATNNNNATC	1 cut(s)	2616
BsaHI	GRCGYC	1 cut(s)	1010
BsaI	GGTCTC	2 cut(s)	59, 1326
BsaJI	CCNNGG	4 cut(s)	400, 1023, 2208, 2920
BsaWI	WCCGGW	2 cut(s)	481, 2082
Bsc4I	CCNNNNNNNGG	6 cut(s)	382, 488, 515, 863, 1024, 1127
Bse1I	ACTGG	7 cut(s)	547, 901, 1519, 1944, 2813, 2831, 2967
Bse3DI	GCAATG	2 cut(s)	1122, 2126
Bse8I	GATNNNNATC	1 cut(s)	2616
BseAI	TCCGGA	1 cut(s)	481
BseBI	CCWGG	2 cut(s)	38, 2938
BseCI	ATCGAT	1 cut(s)	389
BseDI	CCNNGG	4 cut(s)	400, 1023, 2208, 2920
BseJI	GATNNNNATC	1 cut(s)	2616
BseLI	CCNNNNNNNGG	6 cut(s)	382, 488, 515, 863, 1024, 1127
BseMI	GCAATG	2 cut(s)	1122, 2126
BseNI	ACTGG	7 cut(s)	547, 901, 1519, 1944, 2813, 2831, 2967
BseRI	GAGGAG	2 cut(s)	425, 2174
BseSI	GKGCMC	2 cut(s)	1243, 2826
BseXI	GCAGC	9 cut(s)	31, 484, 652, 756, 1057, 2083, 2404, 2740, 2947
BseYI	CCCAGC	3 cut(s)	615, 2071, 2377
BsgI	GTGCAG	1 cut(s)	2408
Bsh1236I	CGCG	3 cut(s)	825, 1326, 2333
Bsh1285I	CGRYCG	1 cut(s)	2748
BshFI	GGCC	7 cut(s)	398, 1334, 1410, 1886, 2319, 2476, 2672
BshNI	GGYRCC	2 cut(s)	1238, 2821
BshVI	ATCGAT	1 cut(s)	389
BsiEI	CGRYCG	1 cut(s)	2748
BsiHKCI	CYCGRG	3 cut(s)	399, 2920, 2972
BsiSI	CCGG	5 cut(s)	246, 482, 2083, 2585, 2921
BslFI	GGGAC	4 cut(s)	472, 1613, 2535, 2810
BslI	CCNNNNNNNGG	6 cut(s)	382, 488, 515, 863, 1024, 1127
BsmAI	GTCTC	9 cut(s)	59, 1153, 1326, 1628, 1676, 2029, 2131, 2644, 2975
BsmFI	GGGAC	4 cut(s)	472, 1613, 2535, 2810
BsmI	GAATGC	2 cut(s)	1915, 2915
BsnI	GGCC	7 cut(s)	398, 1334, 1410, 1886, 2319, 2476, 2672
Bso31I	GGTCTC	2 cut(s)	59, 1326
BsoBI	CYCGRG	3 cut(s)	399, 2920, 2972
Bsp1286I	GDGCHC	3 cut(s)	1243, 2826, 2866
Bsp13I	TCCGGA	1 cut(s)	481
Bsp1720I	GCTNAGC	2 cut(s)	426, 2176
Bsp19I	CCATGG	1 cut(s)	2208
Bsp68I	TCGCGA	1 cut(s)	2333
BspACI	CCGC	9 cut(s)	308, 825, 1430, 1464, 1940, 2046, 2403, 2756, 2908
BspANI	GGCC	7 cut(s)	398, 1334, 1410, 1886, 2319, 2476, 2672
BspDI	ATCGAT	1 cut(s)	389
BspEI	TCCGGA	1 cut(s)	481
BspFNI	CGCG	3 cut(s)	825, 1326, 2333
BspHI	TCATGA	1 cut(s)	1687
BspLI	GGNNCC	5 cut(s)	699, 1240, 1858, 2058, 2823
BspMI	ACCTGC	2 cut(s)	1985, 2891
BspOI	GCTAGC	2 cut(s)	1551, 2123
BspPI	GGATC	6 cut(s)	692, 705, 1049, 1482, 2051, 2064
BspQI	GCTCTTC	1 cut(s)	2871
BspT107I	GGYRCC	2 cut(s)	1238, 2821
BspTNI	GGTCTC	2 cut(s)	59, 1326
BsrDI	GCAATG	2 cut(s)	1122, 2126
BsrI	ACTGG	7 cut(s)	547, 901, 1519, 1944, 2813, 2831, 2967
BssECI	CCNNGG	4 cut(s)	400, 1023, 2208, 2920
BssNI	GRCGYC	1 cut(s)	1010
BssT1I	CCWWGG	2 cut(s)	1023, 2208
Bst2UI	CCWGG	2 cut(s)	38, 2938
Bst4CI	ACNGT	9 cut(s)	86, 1366, 1442, 1604, 1825, 2526, 2638, 2773, 2856
Bst6I	CTCTTC	5 cut(s)	1206, 1356, 2032, 2457, 2871
BstACI	GRCGYC	1 cut(s)	1010
BstAPI	GCANNNNNTGC	1 cut(s)	2243
BstDSI	CCRYGG	1 cut(s)	2208
BstEII	GGTNACC	1 cut(s)	2078
BstFNI	CGCG	3 cut(s)	825, 1326, 2333
BstH2I	RGCGCY	1 cut(s)	336
BstHHI	GCGC	5 cut(s)	335, 993, 1206, 1903, 2248
BstMAI	GTCTC	9 cut(s)	59, 1153, 1326, 1628, 1676, 2029, 2131, 2644, 2975
BstMCI	CGRYCG	1 cut(s)	2748
BstNI	CCWGG	2 cut(s)	38, 2938
BstNSI	RCATGY	4 cut(s)	19, 2237, 2444, 2584
BstPAI	GACNNNNGTC	1 cut(s)	1318
BstPI	GGTNACC	1 cut(s)	2078
BstSCI	CCNGG	5 cut(s)	36, 244, 2919, 2920, 2936
BstSFI	CTRYAG	3 cut(s)	591, 786, 2663
BstSLI	GKGCMC	2 cut(s)	1243, 2826
BstUI	CGCG	3 cut(s)	825, 1326, 2333
BstV1I	GCAGC	9 cut(s)	31, 484, 652, 756, 1057, 2083, 2404, 2740, 2947
BstV2I	GAAGAC	4 cut(s)	25, 34, 152, 2482
BstX2I	RGATCY	2 cut(s)	697, 2056
BstYI	RGATCY	2 cut(s)	697, 2056
Bsu15I	ATCGAT	1 cut(s)	389
BsuRI	GGCC	7 cut(s)	398, 1334, 1410, 1886, 2319, 2476, 2672
BsuTUI	ATCGAT	1 cut(s)	389
BtgI	CCRYGG	1 cut(s)	2208
BtgZI	GCGATG	1 cut(s)	185
BtrI	CACGTC	2 cut(s)	167, 821
BtsI	GCAGTG	2 cut(s)	663, 1920
BtsIMutI	CAGTG	7 cut(s)	663, 1266, 1609, 1830, 1920, 1951, 2253
BtuMI	TCGCGA	1 cut(s)	2333
BveI	ACCTGC	2 cut(s)	1985, 2891
CaiI	CAGNNNCTG	2 cut(s)	1528, 2609
CciI	TCATGA	1 cut(s)	1687
CfoI	GCGC	5 cut(s)	335, 993, 1206, 1903, 2248
Cfr13I	GGNCC	6 cut(s)	278, 397, 1092, 1333, 1589, 1885
Cfr9I	CCCGGG	1 cut(s)	2920
ClaI	ATCGAT	1 cut(s)	389
CseI	GACGC	2 cut(s)	999, 2704
Csp6I	GTAC	9 cut(s)	197, 576, 677, 715, 837, 954, 2280, 2359, 2644
CviQI	GTAC	9 cut(s)	197, 576, 677, 715, 837, 954, 2280, 2359, 2644
DraI	TTTAAA	2 cut(s)	501, 2308
EaeI	YGGCCR	1 cut(s)	2670
Eam1104I	CTCTTC	5 cut(s)	1206, 1356, 2032, 2457, 2871
EarI	CTCTTC	5 cut(s)	1206, 1356, 2032, 2457, 2871
Eco130I	CCWWGG	2 cut(s)	1023, 2208
Eco147I	AGGCCT	1 cut(s)	2319
Eco24I	GRGCYC	1 cut(s)	2866
Eco31I	GGTCTC	2 cut(s)	59, 1326
Eco32I	GATATC	3 cut(s)	877, 1623, 2553
Eco47I	GGWCC	3 cut(s)	278, 1092, 1589
Eco47III	AGCGCT	1 cut(s)	334
Eco57I	CTGAAG	1 cut(s)	1290
Eco88I	CYCGRG	3 cut(s)	399, 2920, 2972
Eco91I	GGTNACC	1 cut(s)	2078
EcoO65I	GGTNACC	1 cut(s)	2078
EcoRI	GAATTC	1 cut(s)	852
EcoRII	CCWGG	2 cut(s)	36, 2936
EcoRV	GATATC	3 cut(s)	877, 1623, 2553
EcoT14I	CCWWGG	2 cut(s)	1023, 2208
EcoT22I	ATGCAT	1 cut(s)	2239
EcoT38I	GRGCYC	1 cut(s)	2866
ErhI	CCWWGG	2 cut(s)	1023, 2208
FalI	AAGNNNNNCTT	2 cut(s)	2720, 2752
FaqI	GGGAC	4 cut(s)	472, 1613, 2535, 2810
FbaI	TGATCA	1 cut(s)	1519
FblI	GTMKAC	2 cut(s)	368, 1261
FriOI	GRGCYC	1 cut(s)	2866
FspAI	RTGCGCAY	2 cut(s)	992, 1205
FspBI	CTAG	7 cut(s)	705, 948, 1377, 1548, 2007, 2120, 2315
FspI	TGCGCA	2 cut(s)	992, 1205
GlaI	GCGC	5 cut(s)	334, 992, 1205, 1902, 2247
GsaI	CCCAGC	3 cut(s)	619, 2075, 2381
GsuI	CTGGAG	1 cut(s)	2282
HaeII	RGCGCY	1 cut(s)	336
HaeIII	GGCC	7 cut(s)	398, 1334, 1410, 1886, 2319, 2476, 2672
HapII	CCGG	5 cut(s)	246, 482, 2083, 2585, 2921
HgaI	GACGC	2 cut(s)	999, 2704
HhaI	GCGC	5 cut(s)	335, 993, 1206, 1903, 2248
Hin1I	GRCGYC	1 cut(s)	1010
Hin6I	GCGC	5 cut(s)	333, 991, 1204, 1901, 2246
HinP1I	GCGC	5 cut(s)	333, 991, 1204, 1901, 2246
HincII	GTYRAC	2 cut(s)	123, 945
HindII	GTYRAC	2 cut(s)	123, 945
HindIII	AAGCTT	3 cut(s)	1381, 1671, 2192
HpaII	CCGG	5 cut(s)	246, 482, 2083, 2585, 2921
HphI	GGTGA	9 cut(s)	260, 1064, 1516, 1529, 1718, 2208, 2299, 2393, 2662
Hpy166II	GTNNAC	9 cut(s)	93, 123, 369, 737, 945, 1262, 2412, 2563, 2686
Hpy8I	GTNNAC	9 cut(s)	93, 123, 369, 737, 945, 1262, 2412, 2563, 2686
Hpy99I	CGWCG	1 cut(s)	825
HpyAV	CCTTC	9 cut(s)	34, 376, 679, 1105, 1105, 1228, 1601, 1789, 1825
HpyCH4III	ACNGT	9 cut(s)	86, 1366, 1442, 1604, 1825, 2526, 2638, 2773, 2856
HpyCH4IV	ACGT	7 cut(s)	166, 820, 981, 1761, 1838, 1866, 1952
HpySE526I	ACGT	7 cut(s)	166, 820, 981, 1761, 1838, 1866, 1952
Hsp92I	GRCGYC	1 cut(s)	1010
HspAI	GCGC	5 cut(s)	333, 991, 1204, 1901, 2246
Kpn2I	TCCGGA	1 cut(s)	481
Ksp22I	TGATCA	1 cut(s)	1519
LguI	GCTCTTC	1 cut(s)	2871
LmnI	GCTCC	6 cut(s)	708, 1789, 1798, 1871, 2185, 2501
Lsp1109I	GCAGC	9 cut(s)	31, 484, 652, 756, 1057, 2083, 2404, 2740, 2947
LweI	GCATC	5 cut(s)	2191, 2222, 2246, 2649, 2707
MaeI	CTAG	7 cut(s)	705, 948, 1377, 1548, 2007, 2120, 2315
MaeII	ACGT	7 cut(s)	166, 820, 981, 1761, 1838, 1866, 1952
MaeIII	GTNAC	7 cut(s)	601, 977, 1706, 2078, 2287, 2716, 2850
MfeI	CAATTG	1 cut(s)	2184
MflI	RGATCY	2 cut(s)	697, 2056
MhlI	GDGCHC	3 cut(s)	1243, 2826, 2866
MlsI	TGGCCA	1 cut(s)	2672
MluNI	TGGCCA	1 cut(s)	2672
MlyI	GAGTC	8 cut(s)	128, 142, 374, 1257, 1630, 1678, 1758, 2600
MmeI	TCCRAC	3 cut(s)	1849, 2480, 2815
Mox20I	TGGCCA	1 cut(s)	2672
Mph1103I	ATGCAT	1 cut(s)	2239
MroI	TCCGGA	1 cut(s)	481
MroXI	GAANNNNTTC	3 cut(s)	351, 1251, 2489
MscI	TGGCCA	1 cut(s)	2672
MseI	TTAA	7 cut(s)	500, 795, 1077, 1437, 1482, 1580, 2307
MslI	CAYNNNNRTG	3 cut(s)	204, 1271, 2484
Msp20I	TGGCCA	1 cut(s)	2672
MspA1I	CMGCKG	7 cut(s)	308, 615, 1739, 2075, 2403, 2417, 2468
MspI	CCGG	5 cut(s)	246, 482, 2083, 2585, 2921
MspR9I	CCNGG	5 cut(s)	38, 246, 2921, 2922, 2938
MunI	CAATTG	1 cut(s)	2184
Mva1269I	GAATGC	2 cut(s)	1915, 2915
MvaI	CCWGG	2 cut(s)	38, 2938
MvnI	CGCG	3 cut(s)	825, 1326, 2333
NciI	CCSGG	3 cut(s)	246, 2921, 2922
NcoI	CCATGG	1 cut(s)	2208
NheI	GCTAGC	2 cut(s)	1547, 2119
NlaIV	GGNNCC	5 cut(s)	699, 1240, 1858, 2058, 2823
NmeAIII	GCCGAG	1 cut(s)	2125
NmuCI	GTSAC	3 cut(s)	1706, 2287, 2716
NruI	TCGCGA	1 cut(s)	2333
NsbI	TGCGCA	2 cut(s)	992, 1205
NsiI	ATGCAT	1 cut(s)	2239
NspI	RCATGY	4 cut(s)	19, 2237, 2444, 2584
OliI	CACNNNNGTG	1 cut(s)	1271
PaeI	GCATGC	2 cut(s)	19, 2237
PaeR7I	CTCGAG	1 cut(s)	2972
PagI	TCATGA	1 cut(s)	1687
PceI	AGGCCT	1 cut(s)	2319
PciSI	GCTCTTC	1 cut(s)	2871
PcsI	WCGNNNNNNNCGW	1 cut(s)	2246
PctI	GAATGC	2 cut(s)	1915, 2915
PdmI	GAANNNNTTC	3 cut(s)	351, 1251, 2489
PfeI	GAWTC	5 cut(s)	757, 1457, 1645, 2086, 2929
PflMI	CCANNNNNTGG	1 cut(s)	1024
Ple19I	CGATCG	1 cut(s)	2748
PleI	GAGTC	8 cut(s)	127, 142, 373, 1257, 1630, 1678, 1757, 2600
PpsI	GAGTC	8 cut(s)	127, 142, 373, 1257, 1630, 1678, 1757, 2600
PshAI	GACNNNNGTC	1 cut(s)	1318
PshBI	ATTAAT	1 cut(s)	1580
Psp1406I	AACGTT	1 cut(s)	1838
Psp6I	CCWGG	2 cut(s)	36, 2936
PspEI	GGTNACC	1 cut(s)	2078
PspFI	CCCAGC	3 cut(s)	615, 2071, 2377
PspGI	CCWGG	2 cut(s)	36, 2936
PspN4I	GGNNCC	5 cut(s)	699, 1240, 1858, 2058, 2823
PspPI	GGNCC	6 cut(s)	278, 397, 1092, 1333, 1589, 1885
PstNI	CAGNNNCTG	2 cut(s)	1528, 2609
PsuI	RGATCY	2 cut(s)	697, 2056
PvuI	CGATCG	1 cut(s)	2748
PvuII	CAGCTG	5 cut(s)	615, 1739, 2075, 2417, 2468
RruI	TCGCGA	1 cut(s)	2333
RsaI	GTAC	9 cut(s)	198, 577, 678, 716, 838, 955, 2281, 2360, 2645
RsaNI	GTAC	9 cut(s)	197, 576, 677, 715, 837, 954, 2280, 2359, 2644
RseI	CAYNNNNRTG	3 cut(s)	204, 1271, 2484
SapI	GCTCTTC	1 cut(s)	2871
SaqAI	TTAA	7 cut(s)	500, 795, 1077, 1437, 1482, 1580, 2307
Sau96I	GGNCC	6 cut(s)	278, 397, 1092, 1333, 1589, 1885
ScaI	AGTACT	1 cut(s)	2281
SchI	GAGTC	8 cut(s)	128, 142, 374, 1257, 1630, 1678, 1758, 2600
ScrFI	CCNGG	5 cut(s)	38, 246, 2921, 2922, 2938
SduI	GDGCHC	3 cut(s)	1243, 2826, 2866
SfaNI	GCATC	5 cut(s)	2191, 2222, 2246, 2649, 2707
SfcI	CTRYAG	3 cut(s)	591, 786, 2663
Sfr274I	CTCGAG	1 cut(s)	2972
SinI	GGWCC	3 cut(s)	278, 1092, 1589
SlaI	CTCGAG	1 cut(s)	2972
SmaI	CCCGGG	1 cut(s)	2922
SmiMI	CAYNNNNRTG	3 cut(s)	204, 1271, 2484
SmlI	CTYRAG	2 cut(s)	692, 2972
SmoI	CTYRAG	2 cut(s)	692, 2972
SpeI	ACTAGT	1 cut(s)	2006
SphI	GCATGC	2 cut(s)	19, 2237
SseBI	AGGCCT	1 cut(s)	2319
SsiI	CCGC	9 cut(s)	308, 825, 1430, 1464, 1940, 2046, 2403, 2756, 2908
SspI	AATATT	2 cut(s)	74, 831
SspMI	CTAG	7 cut(s)	705, 948, 1377, 1548, 2007, 2120, 2315
StuI	AGGCCT	1 cut(s)	2319
StyD4I	CCNGG	5 cut(s)	36, 244, 2919, 2920, 2936
StyI	CCWWGG	2 cut(s)	1023, 2208
TaaI	ACNGT	9 cut(s)	86, 1366, 1442, 1604, 1825, 2526, 2638, 2773, 2856
TaiI	ACGT	7 cut(s)	169, 823, 984, 1764, 1841, 1869, 1955
TaqI	TCGA	5 cut(s)	117, 389, 1290, 1312, 2973
TatI	WGTACW	5 cut(s)	676, 714, 953, 2279, 2358
TauI	GCSGC	3 cut(s)	1466, 1942, 2759
TfiI	GAWTC	5 cut(s)	757, 1457, 1645, 2086, 2929
Tru1I	TTAA	7 cut(s)	500, 795, 1077, 1437, 1482, 1580, 2307
Tru9I	TTAA	7 cut(s)	500, 795, 1077, 1437, 1482, 1580, 2307
TscAI	CASTG	7 cut(s)	663, 1273, 1609, 1830, 1920, 1951, 2260
TseFI	GTSAC	3 cut(s)	1706, 2287, 2716
TseI	GCWGC	9 cut(s)	19, 472, 665, 769, 1070, 2096, 2417, 2753, 2960
Tsp45I	GTSAC	3 cut(s)	1706, 2287, 2716
TspGWI	ACGGA	2 cut(s)	2691, 2968
TspMI	CCCGGG	1 cut(s)	2920
TspRI	CASTG	7 cut(s)	663, 1273, 1609, 1830, 1920, 1951, 2260
Van91I	CCANNNNNTGG	1 cut(s)	1024
VpaK11BI	GGWCC	3 cut(s)	278, 1092, 1589
VspI	ATTAAT	1 cut(s)	1580
XapI	RAATTY	4 cut(s)	852, 1216, 1304, 2900
XceI	RCATGY	4 cut(s)	19, 2237, 2444, 2584
XcmI	CCANNNNNNNNNTGG	3 cut(s)	449, 1981, 2050
XhoI	CTCGAG	1 cut(s)	2972
XmaI	CCCGGG	1 cut(s)	2920
XmiI	GTMKAC	2 cut(s)	368, 1261
XmnI	GAANNNNTTC	3 cut(s)	351, 1251, 2489
XspI	CTAG	7 cut(s)	705, 948, 1377, 1548, 2007, 2120, 2315
ZrmI	AGTACT	1 cut(s)	2281
Zsp2I	ATGCAT	1 cut(s)	2239

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.