pycom15g37570

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0006792
Physical Location & Seq
Forward (+)
37492429 .. 37500464
8036 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2094 bp
ATGAAACTATTCCCTTGGAAAAACCCCAACTCAGACAAACTCTACACTCGTCCCTTCAATTCAATTTCCATTTCCATCAGTCCCTCACAAAGTGAAAAAATGGAGGTGACGTCGGTACAGGGCGTCGCCGGCGGTGTCCAGCACGTCTTCTGCGGCCCCTCCTCGCCCATTTCTTCTCTTTCCATTCTCTCTCCGACTCCATGGAGGAGCGCAAGAGCCAAGAATTCTCATTTCTGTTGTGCCACAACTCGTGTCGCGGAGGCTCCCAACAACGGCAGTAACAAGGTCCCGAAGCGTCACTCCAAGCACTACTTAGCCAGACAGTCTGCAATTGTTCAAGTCCAAGACTCCTCCGACTTGGGCTCCGCTCTCACAAGATTAGGTAGGAGTTTGACAGTTCAAGACTTGAATGCCATTATACGCCATTTGGGGACGAAGAAAAGATGGCATGATCTTTCCCAGCTCTTTGAATGGATGCTACAGAATGAAAAAGTCAGTGCATCATCCTATAGCAGCTATATAAAGTTCATGGGAAAGAGCCTCAATCCTGTGAAAGCATTAGAAATATACAATAACATTCAAGATGAATCAACCAAAAAGAATGTTCACATATGCAATTCTGTTCTTGGTAGTCTGATCAGGAGTGGCAAGTTTGATGTCAGCTTTAAGTTATTTGACCAGATGAAGCAGAATGGTTTAACGCCAGATGCTGTCACGTATAGTACGCTGCTTGCAGGTTGCAGCAAACTCAAAAATGGTTATAATAAGGCATTAGAATTTGTTCAAGAATTGCAGCGTAATGAGCTGCAGATGGACAGTGTAATTTATGGTACACTTTTAGCTGTCTGTGCATCTAATAATAAATTGGAGGAAGCTGAAGGTTATTTTAAGAAGATGAAGGATGAGGGTCATTCACCAAATGTCTACCACTACAGCTCTTTGCTTAATGCGTACTCTATGAGAGGGAACTACAAGGAGGCTGATGCTTTGGTTCAAGATATGAAATCTGCAGGGTTAGTACCAAATAAGGTTATTTTGACAACTTTATTGAAGGTTTATGTCAGAGGGGGGCTGTTCGAAAAATCAAGAGAGCTATTAGGTGAACTGGAAGCTTTGGGTTATGCTGAAGAAGAGATGCCGTACTGTTTATTGATGGATGCCCTTGCTAAGGCTGGGCGTATACATGAAGCTAAGTTGGTTTTTCATGAAATGAAGGAGAAGTCCGTTCGATCAGATGGCTATTCTTACAGTATCATGATTTCAGCTTTCTGCCGAGGTGGGCTTCTGGAAGATGCAAAGCAACTGGCTAAGGATTTTGAAGGAACCCATGATAGATATGATTTAGTTATGTTGAATACAATGATCTGTGCCTATTGCAGAGCAGGCGATATGGATAGTGTAATGGAAATGATGAGAAAAATGGATGAATTAAAAATCACTCCTGATTATAATACCTTCCATATCCTCATAAAATACTTCTGTAAGGAGAAGTTATACCTGCTTGCTTATCAGACCATGGAGGACATGCACAAGAAGGGCCACCAACCAGATGAGGAGTTGTGTTCCTCCTTAATGTTTCTTCTTGGTAAGATAAGAGCATATTCAGAAGCATACTCTGTTTACAATATGCTGAGATATAGCAAGCGGACAATGTGCAAGGCCCTTCATGAGAAGATTCTGCACGTTCTAGTAGCAGGACAGCTTCTCAGAGATGCTTATGTAGTAGTCAAGGACAATGCAGGGTTAATTTCTAAGCCTGCTATTAAAAAGTTTGCAACTGCCTTTATGAAGTTGGGAAACATCAACTTGATAAATGATGTTTTGAAGGCAGTTGATGCTTCTGGCTGCAAGATAGATCAGGGACTATTTCAGATGGCCATATCTCGCTATGTTTCACTCCCCGAGAAGAAGGACATGCTTTTTCAAATGCTACAGTGGATGCCAGGACAAGGTTATGTTGCTGATTCAGCTACAAGAAACCTGATACTGAAAAACTCTCACTTGTTTGGTCGCCAACAGATTGCGGAGATACTCTCAAAGCAGCATATGATTTCAAAAGCTTCAAAATCTCGCGAGAAGGAGAAAAGAGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

698

Amino Acids

78.66

Weight (kDa)

9.19

Isoelectric Point (pI)

41.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_24 PF23276 184 - 299 1.5e-07 Fungal tetratrico peptide repeats
PPR_3 PF13812 189 - 247 3.6e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 200 - 249 8.8e-14 PPR repeat family
PPR_long PF17177 242 - 407 1.4e-12 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 261 - 318 3.5e-10 Pentatricopeptide repeat domain
PPR_2 PF13041 272 - 318 8.1e-10 PPR repeat family
PPR_2 PF13041 306 - 353 1.7e-07 PPR repeat family
PPR_3 PF13812 306 - 354 2.5e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 383 - 425 4.7e-11 PPR repeat family
PPR_3 PF13812 445 - 494 1e-05 Pentatricopeptide repeat domain
PPR_2 PF13041 447 - 495 2.6e-10 PPR repeat family
PPR PF01535 449 - 477 7.9e-06 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 762, 1449
AatII GACGTC 1 cut(s) 113
Acc36I ACCTGC 2 cut(s) 725, 1506
AccBSI CCGCTC 1 cut(s) 368
AccI GTMKAC 2 cut(s) 924, 1180
AccII CGCG 2 cut(s) 257, 2073
AciI CCGC 6 cut(s) 132, 153, 257, 366, 1645, 2024
AcoI YGGCCR 1 cut(s) 1875
AcsI RAATTY 2 cut(s) 223, 776
AcuI CTGAAG 2 cut(s) 897, 1146
AcyI GRCGYC 2 cut(s) 110, 123
AdeI CACNNNGTG 1 cut(s) 92
AfaI GTAC 6 cut(s) 117, 724, 832, 953, 1020, 1142
AfiI CCNNNNNNNGG 3 cut(s) 272, 1168, 1949
AjiI CACGTC 1 cut(s) 145
AjnI CCWGG 1 cut(s) 1942
AlwNI CAGNNNCTG 1 cut(s) 710
Ama87I CYCGRG 1 cut(s) 1901
AoxI GGCC 4 cut(s) 154, 1537, 1659, 1875
ApeKI GCWGC 7 cut(s) 513, 727, 741, 793, 805, 1845, 2041
ApoI RAATTY 2 cut(s) 223, 776
Asp700I GAANNNNTTC 2 cut(s) 8, 780
AspLEI GCGC 1 cut(s) 212
AspS9I GGNCC 4 cut(s) 155, 286, 1537, 1660
AsuHPI GGTGA 3 cut(s) 118, 906, 1112
AsuII TTCGAA 1 cut(s) 1077
AvaI CYCGRG 1 cut(s) 1901
AvaII GGWCC 1 cut(s) 286
BalI TGGCCA 1 cut(s) 1877
BanII GRGCYC 1 cut(s) 365
BauI CACGAG 1 cut(s) 249
BbsI GAAGAC 1 cut(s) 139
BbvI GCAGC 7 cut(s) 525, 714, 753, 792, 805, 1832, 2053
BccI CCATC 6 cut(s) 83, 438, 805, 1147, 1229, 1867
BceAI ACGGC 2 cut(s) 289, 1123
BciT130I CCWGG 1 cut(s) 1944
BclI TGATCA 1 cut(s) 636
BfaI CTAG 1 cut(s) 1688
BfmI CTRYAG 6 cut(s) 479, 508, 806, 931, 1008, 1931
BfuAI ACCTGC 2 cut(s) 725, 1506
BisI GCNGC 8 cut(s) 154, 514, 728, 742, 794, 806, 1846, 2042
BlsI GCNGC 8 cut(s) 155, 515, 729, 743, 795, 807, 1847, 2043
Bme1390I CCNGG 1 cut(s) 1944
Bme18I GGWCC 1 cut(s) 286
BmeT110I CYCGRG 1 cut(s) 1901
BmgBI CACGTC 1 cut(s) 145
BmgT120I GGNCC 4 cut(s) 155, 286, 1537, 1660
BmiI GGNNCC 5 cut(s) 157, 264, 288, 364, 1324
BmrFI CCNGG 1 cut(s) 1944
BpiI GAAGAC 1 cut(s) 139
BplI GAGNNNNNCTC 2 cut(s) 2018, 2050
Bpu10I CCTNAGC 2 cut(s) 1167, 1308
Bpu14I TTCGAA 1 cut(s) 1077
BsaAI YACGTR 1 cut(s) 717
BsaHI GRCGYC 2 cut(s) 110, 123
BsaJI CCNNGG 4 cut(s) 14, 200, 1273, 1515
BsaXI ACNNNNNCTCC 4 cut(s) 95, 125, 347, 377
Bsc4I CCNNNNNNNGG 3 cut(s) 272, 1168, 1949
Bse118I RCCGGY 1 cut(s) 128
Bse1I ACTGG 2 cut(s) 1110, 1308
BseBI CCWGG 1 cut(s) 1944
BseDI CCNNGG 4 cut(s) 14, 200, 1273, 1515
BseGI GGATG 6 cut(s) 480, 503, 907, 1162, 1429, 1944
BseLI CCNNNNNNNGG 3 cut(s) 272, 1168, 1949
BseMII CTCAG 3 cut(s) 45, 1622, 1720
BseNI ACTGG 2 cut(s) 1110, 1308
BseRI GAGGAG 4 cut(s) 151, 220, 340, 1568
BseXI GCAGC 7 cut(s) 525, 714, 753, 792, 805, 1832, 2053
BseYI CCCAGC 2 cut(s) 459, 1172
BsgI GTGCAG 1 cut(s) 1664
Bsh1236I CGCG 2 cut(s) 257, 2073
BshFI GGCC 4 cut(s) 156, 1539, 1661, 1877
BsiHKCI CYCGRG 1 cut(s) 1901
BsiSI CCGG 1 cut(s) 129
BslFI GGGAC 5 cut(s) 36, 66, 272, 445, 1875
BslI CCNNNNNNNGG 3 cut(s) 272, 1168, 1949
BsmFI GGGAC 5 cut(s) 36, 66, 272, 445, 1875
BsmI GAATGC 1 cut(s) 415
BsnI GGCC 4 cut(s) 156, 1539, 1661, 1877
BsoBI CYCGRG 1 cut(s) 1901
Bsp119I TTCGAA 1 cut(s) 1077
Bsp1286I GDGCHC 1 cut(s) 365
Bsp143I GATC 5 cut(s) 451, 636, 1229, 1362, 1855
Bsp19I CCATGG 2 cut(s) 200, 1515
Bsp68I TCGCGA 1 cut(s) 2073
BspACI CCGC 6 cut(s) 132, 153, 257, 366, 1645, 2024
BspANI GGCC 4 cut(s) 156, 1539, 1661, 1877
BspCNI CTCAG 3 cut(s) 44, 1623, 1719
BspFNI CGCG 2 cut(s) 257, 2073
BspHI TCATGA 3 cut(s) 1204, 1254, 1666
BspLI GGNNCC 5 cut(s) 157, 264, 288, 364, 1324
BspMAI CTGCAG 2 cut(s) 810, 1012
BspMI ACCTGC 2 cut(s) 725, 1506
BspT104I TTCGAA 1 cut(s) 1077
BsrBI CCGCTC 1 cut(s) 368
BsrFI RCCGGY 1 cut(s) 128
BsrI ACTGG 2 cut(s) 1110, 1308
BssAI RCCGGY 1 cut(s) 128
BssECI CCNNGG 4 cut(s) 14, 200, 1273, 1515
BssMI GATC 5 cut(s) 451, 636, 1229, 1362, 1855
BssNAI GTATAC 1 cut(s) 1181
BssNI GRCGYC 2 cut(s) 110, 123
BssSI CACGAG 1 cut(s) 249
BssT1I CCWWGG 3 cut(s) 14, 200, 1515
Bst1107I GTATAC 1 cut(s) 1181
Bst2BI CACGAG 1 cut(s) 249
Bst2UI CCWGG 1 cut(s) 1944
Bst4CI ACNGT 6 cut(s) 324, 397, 818, 1145, 1250, 1935
Bst6I CTCTTC 1 cut(s) 1125
BstACI GRCGYC 2 cut(s) 110, 123
BstAPI GCANNNNNTGC 1 cut(s) 1835
BstBAI YACGTR 1 cut(s) 717
BstBI TTCGAA 1 cut(s) 1077
BstC8I GCNNGC 6 cut(s) 130, 732, 1384, 1503, 1643, 1758
BstDEI CTNAG 8 cut(s) 31, 313, 1167, 1191, 1308, 1631, 1706, 1752
BstDSI CCRYGG 2 cut(s) 200, 1515
BstENI CCTNNNNNAGG 1 cut(s) 1166
BstF5I GGATG 6 cut(s) 480, 503, 907, 1162, 1429, 1944
BstFNI CGCG 2 cut(s) 257, 2073
BstHHI GCGC 1 cut(s) 212
BstKTI GATC 5 cut(s) 454, 639, 1232, 1365, 1858
BstMBI GATC 5 cut(s) 451, 636, 1229, 1362, 1855
BstMWI GCNNNNNNNGC 6 cut(s) 129, 802, 848, 1383, 1835, 1967
BstNI CCWGG 1 cut(s) 1944
BstNSI RCATGY 2 cut(s) 1528, 1918
BstSCI CCNGG 1 cut(s) 1942
BstSFI CTRYAG 6 cut(s) 479, 508, 806, 931, 1008, 1931
BstUI CGCG 2 cut(s) 257, 2073
BstV1I GCAGC 7 cut(s) 525, 714, 753, 792, 805, 1832, 2053
BstV2I GAAGAC 1 cut(s) 139
BstZ17I GTATAC 1 cut(s) 1181
BsuRI GGCC 4 cut(s) 156, 1539, 1661, 1877
BtgI CCRYGG 2 cut(s) 200, 1515
BtrI CACGTC 1 cut(s) 145
BtsCI GGATG 6 cut(s) 480, 503, 907, 1162, 1429, 1944
BtsIMutI CAGTG 3 cut(s) 502, 823, 1940
BtuMI TCGCGA 1 cut(s) 2073
BveI ACCTGC 2 cut(s) 725, 1506
Cac8I GCNNGC 6 cut(s) 130, 732, 1384, 1503, 1643, 1758
CaiI CAGNNNCTG 1 cut(s) 710
CciI TCATGA 3 cut(s) 1204, 1254, 1666
CfoI GCGC 1 cut(s) 212
Cfr10I RCCGGY 1 cut(s) 128
Cfr13I GGNCC 4 cut(s) 155, 286, 1537, 1660
CseI GACGC 2 cut(s) 112, 284
Csp6I GTAC 6 cut(s) 116, 723, 831, 952, 1019, 1141
CviQI GTAC 6 cut(s) 116, 723, 831, 952, 1019, 1141
DdeI CTNAG 8 cut(s) 31, 313, 1167, 1191, 1308, 1631, 1706, 1752
DpnI GATC 5 cut(s) 453, 638, 1231, 1364, 1857
DpnII GATC 5 cut(s) 451, 636, 1229, 1362, 1855
DraIII CACNNNGTG 1 cut(s) 92
EaeI YGGCCR 1 cut(s) 1875
Eam1104I CTCTTC 1 cut(s) 1125
EarI CTCTTC 1 cut(s) 1125
Eco130I CCWWGG 3 cut(s) 14, 200, 1515
Eco24I GRGCYC 1 cut(s) 365
Eco47I GGWCC 1 cut(s) 286
Eco57I CTGAAG 2 cut(s) 897, 1146
Eco88I CYCGRG 1 cut(s) 1901
EcoNI CCTNNNNNAGG 1 cut(s) 1166
EcoO109I RGGNCCY 2 cut(s) 286, 1660
EcoRI GAATTC 1 cut(s) 223
EcoRII CCWGG 1 cut(s) 1942
EcoT14I CCWWGG 3 cut(s) 14, 200, 1515
EcoT38I GRGCYC 1 cut(s) 365
ErhI CCWWGG 3 cut(s) 14, 200, 1515
FalI AAGNNNNNCTT 2 cut(s) 296, 328
FaqI GGGAC 5 cut(s) 36, 66, 272, 445, 1875
FauNDI CATATG 2 cut(s) 611, 2046
FbaI TGATCA 1 cut(s) 636
FblI GTMKAC 2 cut(s) 924, 1180
Fnu4HI GCNGC 8 cut(s) 154, 514, 728, 742, 794, 806, 1846, 2042
FokI GGATG 6 cut(s) 487, 490, 914, 1169, 1436, 1951
FriOI GRGCYC 1 cut(s) 365
Fsp4HI GCNGC 8 cut(s) 154, 514, 728, 742, 794, 806, 1846, 2042
FspBI CTAG 1 cut(s) 1688
GlaI GCGC 1 cut(s) 211
GluI GCNGC 8 cut(s) 154, 514, 728, 742, 794, 806, 1846, 2042
GsaI CCCAGC 2 cut(s) 463, 1176
HaeIII GGCC 4 cut(s) 156, 1539, 1661, 1877
HapII CCGG 1 cut(s) 129
HgaI GACGC 2 cut(s) 112, 284
HhaI GCGC 1 cut(s) 212
Hin1I GRCGYC 2 cut(s) 110, 123
Hin6I GCGC 1 cut(s) 210
HinP1I GCGC 1 cut(s) 210
HindIII AAGCTT 2 cut(s) 1110, 2058
HinfI GANTC 5 cut(s) 196, 347, 587, 1675, 1964
HpaII CCGG 1 cut(s) 129
HphI GGTGA 3 cut(s) 118, 906, 1112
Hpy166II GTNNAC 6 cut(s) 607, 833, 925, 1103, 1181, 1621
Hpy8I GTNNAC 6 cut(s) 607, 833, 925, 1103, 1181, 1621
Hpy99I CGWCG 2 cut(s) 115, 128
HpyCH4III ACNGT 6 cut(s) 324, 397, 818, 1145, 1250, 1935
HpyCH4IV ACGT 4 cut(s) 110, 144, 716, 1683
HpyF10VI GCNNNNNNNGC 6 cut(s) 129, 802, 848, 1383, 1835, 1967
HpyF3I CTNAG 8 cut(s) 31, 313, 1167, 1191, 1308, 1631, 1706, 1752
HpySE526I ACGT 4 cut(s) 110, 144, 716, 1683
Hsp92I GRCGYC 2 cut(s) 110, 123
HspAI GCGC 1 cut(s) 210
KroI GCCGGC 1 cut(s) 128
KroNI GCCGGC 1 cut(s) 130
Ksp22I TGATCA 1 cut(s) 636
Kzo9I GATC 5 cut(s) 451, 636, 1229, 1362, 1855
LmnI GCTCC 3 cut(s) 207, 268, 368
Lsp1109I GCAGC 7 cut(s) 525, 714, 753, 792, 805, 1832, 2053
MaeI CTAG 1 cut(s) 1688
MaeII ACGT 4 cut(s) 110, 144, 716, 1683
MaeIII GTNAC 4 cut(s) 106, 278, 296, 712
MalI GATC 5 cut(s) 453, 638, 1231, 1364, 1857
MbiI CCGCTC 1 cut(s) 368
MboI GATC 5 cut(s) 451, 636, 1229, 1362, 1855
MfeI CAATTG 1 cut(s) 330
MhlI GDGCHC 1 cut(s) 365
MlsI TGGCCA 1 cut(s) 1877
MluNI TGGCCA 1 cut(s) 1877
MlyI GAGTC 2 cut(s) 190, 341
MmeI TCCRAC 2 cut(s) 218, 378
Mox20I TGGCCA 1 cut(s) 1877
MreI CGCCGGCG 1 cut(s) 128
MroNI GCCGGC 1 cut(s) 128
MroXI GAANNNNTTC 2 cut(s) 8, 780
MscI TGGCCA 1 cut(s) 1877
MseI TTAA 8 cut(s) 666, 698, 888, 945, 1430, 1571, 1745, 1764
Msp20I TGGCCA 1 cut(s) 1877
MspI CCGG 1 cut(s) 129
MspR9I CCNGG 1 cut(s) 1944
MunI CAATTG 1 cut(s) 330
Mva1269I GAATGC 1 cut(s) 415
MvaI CCWGG 1 cut(s) 1944
MvnI CGCG 2 cut(s) 257, 2073
MwoI GCNNNNNNNGC 6 cut(s) 129, 802, 848, 1383, 1835, 1967
NaeI GCCGGC 1 cut(s) 130
NcoI CCATGG 2 cut(s) 200, 1515
NdeI CATATG 2 cut(s) 611, 2046
NdeII GATC 5 cut(s) 451, 636, 1229, 1362, 1855
NgoMIV GCCGGC 1 cut(s) 128
NlaIV GGNNCC 5 cut(s) 157, 264, 288, 364, 1324
NmeAIII GCCGAG 1 cut(s) 1298
NmuCI GTSAC 3 cut(s) 106, 296, 712
NruI TCGCGA 1 cut(s) 2073
NspI RCATGY 2 cut(s) 1528, 1918
NspV TTCGAA 1 cut(s) 1077
PagI TCATGA 3 cut(s) 1204, 1254, 1666
PctI GAATGC 1 cut(s) 415
PdiI GCCGGC 1 cut(s) 130
PdmI GAANNNNTTC 2 cut(s) 8, 780
PfeI GAWTC 3 cut(s) 587, 1675, 1964
PkrI GCNGC 8 cut(s) 155, 515, 729, 743, 795, 807, 1847, 2043
PleI GAGTC 2 cut(s) 190, 341
PpsI GAGTC 2 cut(s) 190, 341
Ppu21I YACGTR 1 cut(s) 717
PpuMI RGGWCCY 1 cut(s) 286
PsiI TTATAA 2 cut(s) 762, 1449
Psp5II RGGWCCY 1 cut(s) 286
Psp6I CCWGG 1 cut(s) 1942
PspFI CCCAGC 2 cut(s) 459, 1172
PspGI CCWGG 1 cut(s) 1942
PspN4I GGNNCC 5 cut(s) 157, 264, 288, 364, 1324
PspPI GGNCC 4 cut(s) 155, 286, 1537, 1660
PspPPI RGGWCCY 1 cut(s) 286
PstI CTGCAG 2 cut(s) 810, 1012
PstNI CAGNNNCTG 1 cut(s) 710
RruI TCGCGA 1 cut(s) 2073
RsaI GTAC 6 cut(s) 117, 724, 832, 953, 1020, 1142
RsaNI GTAC 6 cut(s) 116, 723, 831, 952, 1019, 1141
SaqAI TTAA 8 cut(s) 666, 698, 888, 945, 1430, 1571, 1745, 1764
SatI GCNGC 8 cut(s) 154, 514, 728, 742, 794, 806, 1846, 2042
Sau3AI GATC 5 cut(s) 451, 636, 1229, 1362, 1855
Sau96I GGNCC 4 cut(s) 155, 286, 1537, 1660
SchI GAGTC 2 cut(s) 190, 341
ScrFI CCNGG 1 cut(s) 1944
SduI GDGCHC 1 cut(s) 365
SfcI CTRYAG 6 cut(s) 479, 508, 806, 931, 1008, 1931
SfuI TTCGAA 1 cut(s) 1077
SgrAI CRCCGGYG 1 cut(s) 128
SinI GGWCC 1 cut(s) 286
SsiI CCGC 6 cut(s) 132, 153, 257, 366, 1645, 2024
SspMI CTAG 1 cut(s) 1688
StyD4I CCNGG 1 cut(s) 1942
StyI CCWWGG 3 cut(s) 14, 200, 1515
TaaI ACNGT 6 cut(s) 324, 397, 818, 1145, 1250, 1935
TaiI ACGT 4 cut(s) 113, 147, 719, 1686
TaqI TCGA 2 cut(s) 1077, 1228
TauI GCSGC 1 cut(s) 156
TfiI GAWTC 3 cut(s) 587, 1675, 1964
Tru1I TTAA 8 cut(s) 666, 698, 888, 945, 1430, 1571, 1745, 1764
Tru9I TTAA 8 cut(s) 666, 698, 888, 945, 1430, 1571, 1745, 1764
TscAI CASTG 3 cut(s) 502, 823, 1940
TseFI GTSAC 3 cut(s) 106, 296, 712
TseI GCWGC 7 cut(s) 513, 727, 741, 793, 805, 1845, 2041
Tsp45I GTSAC 3 cut(s) 106, 296, 712
TspGWI ACGGA 1 cut(s) 1213
TspRI CASTG 3 cut(s) 502, 823, 1940
VpaK11BI GGWCC 1 cut(s) 286
XagI CCTNNNNNAGG 1 cut(s) 1166
XapI RAATTY 2 cut(s) 223, 776
XceI RCATGY 2 cut(s) 1528, 1918
XmiI GTMKAC 2 cut(s) 924, 1180
XmnI GAANNNNTTC 2 cut(s) 8, 780
XspI CTAG 1 cut(s) 1688
ZraI GACGTC 1 cut(s) 111
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.