Histidine kinase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G01830 AT2G01830 AT2G01830 AT2G01830 AT2G01830 AT2G01830 |
| fragaria_vesca | FvH4_4g33130 FvH4_4g33130 FvH4_4g33130 FvH4_4g33130 FvH4_4g33130 FvH4_4g33130 FvH4_4g33130 |
| malus_domestica | MD13G1017000.v1.1 MD16G1014900.v1.1 |
| prunus_persica | Prupe.1G336400_v2.0.a1 Prupe.1G336400_v2.0.a1 |
| pyrus_communis | pycom13g01470 pycom16g01380 pycom16g01390 |
| rosa_chinensis | RchiOBHm_Chr4g0442181 |
| rosa_laevigata | RLG00000006026 RLG00000006029 RLG00000006032 |
| rosa_multiflora | Rmu_sc0010284.1_g000006 |
| rosa_roxburghii | Rroxscaffold_5G00383100 |
| rosa_rugosa | Rorug04G0339300 Rorug04G0339300 Rorug04G0339300 |
| rosa_samantha | Rh4AG391100 Rh4BG404700 |
| rosa_wichuraiana | Rw4G033800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 814 |
| AccB1I | GGYRCC | 1 cut(s) | 25 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 36 |
| AccI | GTMKAC | 2 cut(s) | 865, 1012 |
| AciI | CCGC | 1 cut(s) | 1044 |
| AclWI | GGATC | 1 cut(s) | 1113 |
| AcoI | YGGCCR | 1 cut(s) | 703 |
| AcsI | RAATTY | 3 cut(s) | 513, 578, 1001 |
| AdeI | CACNNNGTG | 1 cut(s) | 36 |
| AfaI | GTAC | 1 cut(s) | 1030 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 36, 148, 239, 1022 |
| AflIII | ACRYGT | 2 cut(s) | 886, 1336 |
| AgsI | TTSAA | 4 cut(s) | 667, 812, 921, 980 |
| AjiI | CACGTC | 1 cut(s) | 33 |
| AjnI | CCWGG | 1 cut(s) | 879 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 393, 425 |
| Alw26I | GTCTC | 2 cut(s) | 650, 1186 |
| AlwI | GGATC | 1 cut(s) | 1113 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 176 |
| AoxI | GGCC | 1 cut(s) | 703 |
| ApeKI | GCWGC | 6 cut(s) | 107, 176, 737, 875, 1166, 1221 |
| ApoI | RAATTY | 3 cut(s) | 513, 578, 1001 |
| AseI | ATTAAT | 1 cut(s) | 344 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 402 |
| AspA2I | CCTAGG | 1 cut(s) | 247 |
| AsuC2I | CCSGG | 2 cut(s) | 365, 1273 |
| AsuHPI | GGTGA | 3 cut(s) | 646, 1033, 1340 |
| AsuNHI | GCTAGC | 1 cut(s) | 481 |
| AvrII | CCTAGG | 1 cut(s) | 247 |
| AxyI | CCTNAGG | 1 cut(s) | 1101 |
| BaeGI | GKGCMC | 1 cut(s) | 28 |
| BalI | TGGCCA | 1 cut(s) | 705 |
| BanI | GGYRCC | 1 cut(s) | 25 |
| BanII | GRGCYC | 1 cut(s) | 627 |
| BauI | CACGAG | 1 cut(s) | 1017 |
| BbsI | GAAGAC | 1 cut(s) | 798 |
| BbvI | GCAGC | 6 cut(s) | 119, 163, 749, 862, 1153, 1233 |
| BccI | CCATC | 6 cut(s) | 289, 695, 714, 979, 1142, 1225 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 15, 49 |
| BciT130I | CCWGG | 1 cut(s) | 881 |
| BciVI | GTATCC | 2 cut(s) | 844, 1292 |
| BcnI | CCSGG | 2 cut(s) | 365, 1273 |
| BcoDI | GTCTC | 2 cut(s) | 650, 1186 |
| BfaI | CTAG | 9 cut(s) | 248, 428, 462, 482, 560, 617, 927, 1116, 1301 |
| BfuAI | ACCTGC | 1 cut(s) | 814 |
| BfuI | GTATCC | 2 cut(s) | 844, 1292 |
| BglII | AGATCT | 1 cut(s) | 1343 |
| BisI | GCNGC | 6 cut(s) | 108, 177, 738, 876, 1167, 1222 |
| BlnI | CCTAGG | 1 cut(s) | 247 |
| BlpI | GCTNAGC | 1 cut(s) | 621 |
| BlsI | GCNGC | 6 cut(s) | 109, 178, 739, 877, 1168, 1223 |
| Bme1390I | CCNGG | 3 cut(s) | 365, 881, 1273 |
| BmgBI | CACGTC | 1 cut(s) | 33 |
| BmiI | GGNNCC | 1 cut(s) | 27 |
| BmrFI | CCNGG | 3 cut(s) | 365, 881, 1273 |
| BmrI | ACTGGG | 1 cut(s) | 190 |
| BmsI | GCATC | 5 cut(s) | 367, 781, 969, 1233, 1277 |
| BmtI | GCTAGC | 1 cut(s) | 485 |
| BmuI | ACTGGG | 1 cut(s) | 190 |
| BpiI | GAAGAC | 1 cut(s) | 798 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 621 |
| BpuEI | CTTGAG | 2 cut(s) | 300, 976 |
| BpuMI | CCSGG | 2 cut(s) | 365, 1273 |
| Bsa29I | ATCGAT | 1 cut(s) | 529 |
| BsaBI | GATNNNNATC | 1 cut(s) | 705 |
| BsaJI | CCNNGG | 2 cut(s) | 247, 879 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 36, 148, 239, 1022 |
| Bse1I | ACTGG | 3 cut(s) | 196, 752, 949 |
| Bse21I | CCTNAGG | 1 cut(s) | 1101 |
| Bse3DI | GCAATG | 1 cut(s) | 117 |
| Bse8I | GATNNNNATC | 1 cut(s) | 705 |
| BseBI | CCWGG | 1 cut(s) | 881 |
| BseCI | ATCGAT | 1 cut(s) | 529 |
| BseDI | CCNNGG | 2 cut(s) | 247, 879 |
| BseGI | GGATG | 3 cut(s) | 139, 695, 1268 |
| BseJI | GATNNNNATC | 1 cut(s) | 705 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 36, 148, 239, 1022 |
| BseMI | GCAATG | 1 cut(s) | 117 |
| BseMII | CTCAG | 3 cut(s) | 612, 810, 1092 |
| BseNI | ACTGG | 3 cut(s) | 196, 752, 949 |
| BseSI | GKGCMC | 1 cut(s) | 28 |
| BseXI | GCAGC | 6 cut(s) | 119, 163, 749, 862, 1153, 1233 |
| Bsh1285I | CGRYCG | 1 cut(s) | 533 |
| BshFI | GGCC | 1 cut(s) | 705 |
| BshNI | GGYRCC | 1 cut(s) | 25 |
| BshVI | ATCGAT | 1 cut(s) | 529 |
| BsiEI | CGRYCG | 1 cut(s) | 533 |
| BsiSI | CCGG | 2 cut(s) | 364, 1272 |
| BslFI | GGGAC | 1 cut(s) | 178 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 36, 148, 239, 1022 |
| BsmAI | GTCTC | 2 cut(s) | 650, 1186 |
| BsmFI | GGGAC | 1 cut(s) | 178 |
| BsmI | GAATGC | 3 cut(s) | 56, 258, 414 |
| BsnI | GGCC | 1 cut(s) | 705 |
| Bsp1286I | GDGCHC | 2 cut(s) | 28, 627 |
| Bsp143I | GATC | 4 cut(s) | 526, 530, 1105, 1343 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 621 |
| BspACI | CCGC | 1 cut(s) | 1044 |
| BspANI | GGCC | 1 cut(s) | 705 |
| BspCNI | CTCAG | 3 cut(s) | 613, 811, 1093 |
| BspDI | ATCGAT | 1 cut(s) | 529 |
| BspHI | TCATGA | 1 cut(s) | 217 |
| BspLI | GGNNCC | 1 cut(s) | 27 |
| BspMI | ACCTGC | 1 cut(s) | 814 |
| BspOI | GCTAGC | 1 cut(s) | 485 |
| BspPI | GGATC | 1 cut(s) | 1113 |
| BspT107I | GGYRCC | 1 cut(s) | 25 |
| BsrDI | GCAATG | 1 cut(s) | 117 |
| BsrI | ACTGG | 3 cut(s) | 196, 752, 949 |
| BssECI | CCNNGG | 2 cut(s) | 247, 879 |
| BssMI | GATC | 4 cut(s) | 526, 530, 1105, 1343 |
| BssNAI | GTATAC | 1 cut(s) | 866 |
| BssSI | CACGAG | 1 cut(s) | 1017 |
| BssT1I | CCWWGG | 1 cut(s) | 247 |
| Bst1107I | GTATAC | 1 cut(s) | 866 |
| Bst2BI | CACGAG | 1 cut(s) | 1017 |
| Bst2UI | CCWGG | 1 cut(s) | 881 |
| Bst4CI | ACNGT | 3 cut(s) | 211, 870, 917 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 176 |
| BstC8I | GCNNGC | 6 cut(s) | 258, 382, 483, 909, 1134, 1219 |
| BstDEI | CTNAG | 3 cut(s) | 621, 819, 1101 |
| BstF5I | GGATG | 3 cut(s) | 139, 695, 1268 |
| BstKTI | GATC | 4 cut(s) | 529, 533, 1108, 1346 |
| BstMAI | GTCTC | 2 cut(s) | 650, 1186 |
| BstMBI | GATC | 4 cut(s) | 526, 530, 1105, 1343 |
| BstMCI | CGRYCG | 1 cut(s) | 533 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 176, 185, 262, 311, 904 |
| BstNI | CCWGG | 1 cut(s) | 881 |
| BstNSI | RCATGY | 1 cut(s) | 1340 |
| BstSCI | CCNGG | 3 cut(s) | 363, 879, 1271 |
| BstSLI | GKGCMC | 1 cut(s) | 28 |
| BstV1I | GCAGC | 6 cut(s) | 119, 163, 749, 862, 1153, 1233 |
| BstV2I | GAAGAC | 1 cut(s) | 798 |
| BstX2I | RGATCY | 2 cut(s) | 1105, 1343 |
| BstYI | RGATCY | 2 cut(s) | 1105, 1343 |
| BstZ17I | GTATAC | 1 cut(s) | 866 |
| Bsu15I | ATCGAT | 1 cut(s) | 529 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1101 |
| BsuI | GTATCC | 2 cut(s) | 844, 1292 |
| BsuRI | GGCC | 1 cut(s) | 705 |
| BsuTUI | ATCGAT | 1 cut(s) | 529 |
| BtrI | CACGTC | 1 cut(s) | 33 |
| BtsCI | GGATG | 3 cut(s) | 139, 695, 1268 |
| BtsI | GCAGTG | 1 cut(s) | 51 |
| BtsIMutI | CAGTG | 2 cut(s) | 51, 582 |
| BveI | ACCTGC | 1 cut(s) | 814 |
| Cac8I | GCNNGC | 6 cut(s) | 258, 382, 483, 909, 1134, 1219 |
| CaiI | CAGNNNCTG | 1 cut(s) | 176 |
| CciI | TCATGA | 1 cut(s) | 217 |
| ClaI | ATCGAT | 1 cut(s) | 529 |
| Csp6I | GTAC | 1 cut(s) | 1029 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 543, 578 |
| CviAII | CATG | 7 cut(s) | 218, 235, 904, 1084, 1245, 1317, 1337 |
| CviQI | GTAC | 1 cut(s) | 1029 |
| DdeI | CTNAG | 3 cut(s) | 621, 819, 1101 |
| DpnI | GATC | 4 cut(s) | 528, 532, 1107, 1345 |
| DpnII | GATC | 4 cut(s) | 526, 530, 1105, 1343 |
| DraI | TTTAAA | 1 cut(s) | 715 |
| DraIII | CACNNNGTG | 1 cut(s) | 36 |
| EaeI | YGGCCR | 1 cut(s) | 703 |
| Eco130I | CCWWGG | 1 cut(s) | 247 |
| Eco24I | GRGCYC | 1 cut(s) | 627 |
| Eco32I | GATATC | 1 cut(s) | 14 |
| Eco81I | CCTNAGG | 1 cut(s) | 1101 |
| EcoRII | CCWGG | 1 cut(s) | 879 |
| EcoRV | GATATC | 1 cut(s) | 14 |
| EcoT14I | CCWWGG | 1 cut(s) | 247 |
| EcoT22I | ATGCAT | 1 cut(s) | 1075 |
| EcoT38I | GRGCYC | 1 cut(s) | 627 |
| ErhI | CCWWGG | 1 cut(s) | 247 |
| FaeI | CATG | 7 cut(s) | 221, 238, 907, 1087, 1248, 1320, 1340 |
| FaqI | GGGAC | 1 cut(s) | 178 |
| FatI | CATG | 7 cut(s) | 217, 234, 903, 1083, 1244, 1316, 1336 |
| FblI | GTMKAC | 2 cut(s) | 865, 1012 |
| Fnu4HI | GCNGC | 6 cut(s) | 108, 177, 738, 876, 1167, 1222 |
| FokI | GGATG | 3 cut(s) | 146, 682, 1255 |
| FriOI | GRGCYC | 1 cut(s) | 627 |
| Fsp4HI | GCNGC | 6 cut(s) | 108, 177, 738, 876, 1167, 1222 |
| FspBI | CTAG | 9 cut(s) | 248, 428, 462, 482, 560, 617, 927, 1116, 1301 |
| GluI | GCNGC | 6 cut(s) | 108, 177, 738, 876, 1167, 1222 |
| HaeIII | GGCC | 1 cut(s) | 705 |
| HapII | CCGG | 2 cut(s) | 364, 1272 |
| Hin1II | CATG | 7 cut(s) | 221, 238, 907, 1087, 1248, 1320, 1340 |
| HincII | GTYRAC | 1 cut(s) | 1013 |
| HindII | GTYRAC | 1 cut(s) | 1013 |
| HindIII | AAGCTT | 2 cut(s) | 318, 813 |
| HinfI | GANTC | 4 cut(s) | 243, 537, 1200, 1313 |
| HpaII | CCGG | 2 cut(s) | 364, 1272 |
| HphI | GGTGA | 3 cut(s) | 646, 1033, 1340 |
| Hpy166II | GTNNAC | 3 cut(s) | 39, 866, 1013 |
| Hpy188I | TCNGA | 9 cut(s) | 21, 454, 499, 542, 655, 700, 784, 820, 996 |
| Hpy188III | TCNNGA | 7 cut(s) | 218, 462, 509, 534, 927, 1100, 1228 |
| Hpy8I | GTNNAC | 3 cut(s) | 39, 866, 1013 |
| Hpy99I | CGWCG | 1 cut(s) | 37 |
| HpyAV | CCTTC | 4 cut(s) | 677, 910, 1122, 1303 |
| HpyCH4III | ACNGT | 3 cut(s) | 211, 870, 917 |
| HpyCH4IV | ACGT | 3 cut(s) | 32, 830, 886 |
| HpyCH4V | TGCA | 5 cut(s) | 56, 115, 907, 1062, 1073 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 176, 185, 262, 311, 904 |
| HpyF3I | CTNAG | 3 cut(s) | 621, 819, 1101 |
| HpySE526I | ACGT | 3 cut(s) | 32, 830, 886 |
| Hsp92II | CATG | 7 cut(s) | 221, 238, 907, 1087, 1248, 1320, 1340 |
| Kzo9I | GATC | 4 cut(s) | 526, 530, 1105, 1343 |
| Lsp1109I | GCAGC | 6 cut(s) | 119, 163, 749, 862, 1153, 1233 |
| LweI | GCATC | 5 cut(s) | 367, 781, 969, 1233, 1277 |
| MaeI | CTAG | 9 cut(s) | 248, 428, 462, 482, 560, 617, 927, 1116, 1301 |
| MaeII | ACGT | 3 cut(s) | 32, 830, 886 |
| MaeIII | GTNAC | 3 cut(s) | 826, 1079, 1171 |
| MalI | GATC | 4 cut(s) | 528, 532, 1107, 1345 |
| MboI | GATC | 4 cut(s) | 526, 530, 1105, 1343 |
| MboII | GAAGA | 5 cut(s) | 410, 800, 803, 1263, 1343 |
| MflI | RGATCY | 2 cut(s) | 1105, 1343 |
| MhlI | GDGCHC | 2 cut(s) | 28, 627 |
| MlsI | TGGCCA | 1 cut(s) | 705 |
| MluCI | AATT | 7 cut(s) | 45, 155, 513, 549, 578, 1001, 1048 |
| MluNI | TGGCCA | 1 cut(s) | 705 |
| Mox20I | TGGCCA | 1 cut(s) | 705 |
| Mph1103I | ATGCAT | 1 cut(s) | 1075 |
| MroXI | GAANNNNTTC | 1 cut(s) | 402 |
| MscI | TGGCCA | 1 cut(s) | 705 |
| MslI | CAYNNNNRTG | 2 cut(s) | 833, 1229 |
| Msp20I | TGGCCA | 1 cut(s) | 705 |
| MspI | CCGG | 2 cut(s) | 364, 1272 |
| MspR9I | CCNGG | 3 cut(s) | 365, 881, 1273 |
| Mva1269I | GAATGC | 3 cut(s) | 56, 258, 414 |
| MvaI | CCWGG | 1 cut(s) | 881 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 176, 185, 262, 311, 904 |
| NciI | CCSGG | 2 cut(s) | 365, 1273 |
| NdeII | GATC | 4 cut(s) | 526, 530, 1105, 1343 |
| NheI | GCTAGC | 1 cut(s) | 481 |
| NlaIII | CATG | 7 cut(s) | 221, 238, 907, 1087, 1248, 1320, 1340 |
| NlaIV | GGNNCC | 1 cut(s) | 27 |
| NmuCI | GTSAC | 2 cut(s) | 826, 1079 |
| NsiI | ATGCAT | 1 cut(s) | 1075 |
| NspI | RCATGY | 1 cut(s) | 1340 |
| PagI | TCATGA | 1 cut(s) | 217 |
| PciI | ACATGT | 1 cut(s) | 1336 |
| PctI | GAATGC | 3 cut(s) | 56, 258, 414 |
| PdmI | GAANNNNTTC | 1 cut(s) | 402 |
| PfeI | GAWTC | 4 cut(s) | 243, 537, 1200, 1313 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 36 |
| PfoI | TCCNGGA | 1 cut(s) | 1271 |
| PkrI | GCNGC | 6 cut(s) | 109, 178, 739, 877, 1168, 1223 |
| Ple19I | CGATCG | 1 cut(s) | 533 |
| PscI | ACATGT | 1 cut(s) | 1336 |
| PshBI | ATTAAT | 1 cut(s) | 344 |
| Psp6I | CCWGG | 1 cut(s) | 879 |
| PspGI | CCWGG | 1 cut(s) | 879 |
| PspN4I | GGNNCC | 1 cut(s) | 27 |
| PstNI | CAGNNNCTG | 1 cut(s) | 176 |
| PsuI | RGATCY | 2 cut(s) | 1105, 1343 |
| PvuI | CGATCG | 1 cut(s) | 533 |
| RsaI | GTAC | 1 cut(s) | 1030 |
| RsaNI | GTAC | 1 cut(s) | 1029 |
| RseI | CAYNNNNRTG | 2 cut(s) | 833, 1229 |
| SalI | GTCGAC | 1 cut(s) | 1011 |
| SatI | GCNGC | 6 cut(s) | 108, 177, 738, 876, 1167, 1222 |
| Sau3AI | GATC | 4 cut(s) | 526, 530, 1105, 1343 |
| ScrFI | CCNGG | 3 cut(s) | 365, 881, 1273 |
| SduI | GDGCHC | 2 cut(s) | 28, 627 |
| SfaNI | GCATC | 5 cut(s) | 367, 781, 969, 1233, 1277 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 833, 1229 |
| SmlI | CTYRAG | 2 cut(s) | 315, 955 |
| SmoI | CTYRAG | 2 cut(s) | 315, 955 |
| Sse9I | AATT | 7 cut(s) | 45, 155, 513, 549, 578, 1001, 1048 |
| SsiI | CCGC | 1 cut(s) | 1044 |
| SspMI | CTAG | 9 cut(s) | 248, 428, 462, 482, 560, 617, 927, 1116, 1301 |
| StyD4I | CCNGG | 3 cut(s) | 363, 879, 1271 |
| StyI | CCWWGG | 1 cut(s) | 247 |
| TaaI | ACNGT | 3 cut(s) | 211, 870, 917 |
| TaiI | ACGT | 3 cut(s) | 35, 833, 889 |
| TaqI | TCGA | 7 cut(s) | 166, 287, 307, 529, 533, 606, 1012 |
| TaqII | GACCGA | 1 cut(s) | 408 |
| TasI | AATT | 7 cut(s) | 45, 155, 513, 549, 578, 1001, 1048 |
| TatI | WGTACW | 1 cut(s) | 1028 |
| TfiI | GAWTC | 4 cut(s) | 243, 537, 1200, 1313 |
| TscAI | CASTG | 2 cut(s) | 58, 589 |
| TseFI | GTSAC | 2 cut(s) | 826, 1079 |
| TseI | GCWGC | 6 cut(s) | 107, 176, 737, 875, 1166, 1221 |
| Tsp45I | GTSAC | 2 cut(s) | 826, 1079 |
| TspDTI | ATGAA | 9 cut(s) | 234, 251, 602, 696, 801, 892, 1100, 1233, 1305 |
| TspGWI | ACGGA | 3 cut(s) | 131, 255, 684 |
| TspRI | CASTG | 2 cut(s) | 58, 589 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 36 |
| VspI | ATTAAT | 1 cut(s) | 344 |
| XapI | RAATTY | 3 cut(s) | 513, 578, 1001 |
| XbaI | TCTAGA | 2 cut(s) | 461, 926 |
| XceI | RCATGY | 1 cut(s) | 1340 |
| XmaJI | CCTAGG | 1 cut(s) | 247 |
| XmiI | GTMKAC | 2 cut(s) | 865, 1012 |
| XmnI | GAANNNNTTC | 1 cut(s) | 402 |
| XspI | CTAG | 9 cut(s) | 248, 428, 462, 482, 560, 617, 927, 1116, 1301 |
| Zsp2I | ATGCAT | 1 cut(s) | 1075 |