pycom16g02970

Plays an essential role in chain termination during de novo fatty acid synthesis

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0014724
Physical Location & Seq
Forward (+)
1864311 .. 1866768
2458 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1329 bp
ATGGCCACCATCTCTTATCTTGCCTACTTCCCAGTGAGGTGTTCTTCCAGCAGAGATAGCCACGACTCCAATAAGCAAAAGCTGAGCAGCATCAAGATCAATGGAACTTCCACGAAAACCGCAACCAAAGTTGATATGGCAGCTGGTGTGGCAACCAGAAATGACTTCGTGACTGAGCAGCAGGCTAGACAGAACATTCCGACAACCAAGCAGTCCGTTGATCATTTCCGACAAGCGTTTAGCATCGAAGGCGGCGTGGGGTACAGGCAGAGGGTTGTCGTTAGGTCCTATGAGGTTGGCCCGGATAAAACTGCCACACTTGAGAGCATCGTCAATCTGCTTCAGGAGACGGCATTGAATCATGTTTGGATGTCTGGACTCCTGAGTGATGGATTTGGAGCAACACATGAAATGATGAAGAATGATCTTATTTGGGTTGTTTCAAGAATGCAAGTTCAAGTTGACCAGTATCCAATCTGGGGAGAGGTACTGGAAATCGACACTTGGGTTCAAGCATCAGGGAAGAATGGTATGAAGCGAGACTGGTTGATCCGAAGCCAAGCTACAGGCCATATTTTCGCTCGTGCAACCAGCACCTGGGTGATGATGAACCAGAAAACTAGGCGCCTTTCGAAAATGCCAGAGGGAGTGAGGGGTGAGATTGCGCCTTGGTTCATAGAGAAGCAGGCAATCCCAGACGATGTCCCTGAGAAAATCGTCAAGTTGGACAACAACGCTAAGTATGTCAACAACGATTTGAAGCCCAAGAGAAGTGATTTGGACATGAACCAGCATGTCAACAATGTCAAGTACGTACGATGGATGCTTGAGACGATTCCTGACAATATTTTGGAGACTCACCAACTGACTGGAATCACACTAGAATACAGAAAGGAGTGTGGGAGTTCAGATATTGTTCAATCGCTTTGCGATCCAGACAAAGATGGAATGTTGATAGAGGGACTGAAACAAGAGAATCATGACACAAGTCTACTGAACGGATTTTCTCTGGGAGCTGGGATTCTTGAGAACAGCGTGTTTTTGGGCTCCTTTGAGAAGATCCCATTTAGATATACACATCTCCTCCGAACAACTGGGAACCATAAAGATGAAGAGATTGTTCGGGGACGGACTGTTTGGAAGAAAAAACCAGAGCCCTCCCCATTTGCTTCTATAGAGAAACTACAATGGAATGAACTAATTAAGACAATTCTCAAGTCAGATATAACCAATATAAAGTCGGGTGGTACAAAATATAAATATCACATTTTGCGAGATGTGCCATACAATCGGTATACCTTCAACATTTCCTCATATCGAACGAGTTAA

Protein Analysis

443

Amino Acids

50.37

Weight (kDa)

9.02

Isoelectric Point (pI)

43.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acyl-ACP_TE PF01643 87 - 218 7.5e-33 Acyl-ACP thioesterase N-terminal domain
Acyl-ACP_TE_C PF20791 246 - 314 3e-23 Acyl-ACP thioesterase C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014724)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g26420
malus_domestica MD13G1032900.v1.1 MD16G1034900.v1.1
prunus_persica Prupe.1G319800_v2.0.a1
pyrus_communis pycom13g02840 pycom16g02970
rosa_chinensis RchiOBHm_Chr4g0434051
rosa_laevigata RLG00000006705
rosa_multiflora Rmu_sc0000352.1_g000027 Rmu_sc0000352.1_g000028
rosa_roxburghii Rroxscaffold_5G00375460
rosa_rugosa Rorug04G0273000
rosa_samantha Rh4AG328700 Rh4BG336000 Rh4CG351500 Rh4DG332400
rosa_wichuraiana Rw4G028500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 624
AccB7I CCANNNNNTGG 1 cut(s) 597
AccI GTMKAC 2 cut(s) 991, 1295
AciI CCGC 2 cut(s) 120, 252
AclWI GGATC 3 cut(s) 544, 926, 1054
AcoI YGGCCR 1 cut(s) 3
AcuI CTGAAG 1 cut(s) 326
AcyI GRCGYC 1 cut(s) 625
AfaI GTAC 5 cut(s) 263, 489, 812, 816, 1249
AfiI CCNNNNNNNGG 2 cut(s) 479, 597
AgsI TTSAA 7 cut(s) 358, 444, 458, 512, 760, 920, 1303
AjnI CCWGG 1 cut(s) 596
AleI CACNNNNGTG 1 cut(s) 599
AluBI AGCT 4 cut(s) 82, 143, 563, 1016
AluI AGCT 4 cut(s) 82, 143, 563, 1016
Alw26I GTCTC 4 cut(s) 341, 534, 824, 848
AlwI GGATC 3 cut(s) 544, 926, 1054
AlwNI CAGNNNCTG 1 cut(s) 597
AoxI GGCC 3 cut(s) 3, 298, 568
ApeKI GCWGC 3 cut(s) 87, 140, 178
ArsI GACNNNNNNTTYG 2 cut(s) 1119, 1151
AspLEI GCGC 2 cut(s) 627, 667
AspS9I GGNCC 2 cut(s) 285, 299
AsuC2I CCSGG 1 cut(s) 302
AsuHPI GGTGA 3 cut(s) 613, 668, 851
AsuII TTCGAA 1 cut(s) 632
AvaII GGWCC 1 cut(s) 285
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 1 cut(s) 624
BanII GRGCYC 2 cut(s) 1049, 1158
BarI GAAGNNNNNNTAC 2 cut(s) 547, 579
BauI CACGAG 1 cut(s) 582
BbvI GCAGC 3 cut(s) 99, 152, 190
BccI CCATC 4 cut(s) 17, 383, 813, 938
BceAI ACGGC 1 cut(s) 366
BciT130I CCWGG 1 cut(s) 598
BciVI GTATCC 1 cut(s) 480
BclI TGATCA 1 cut(s) 220
BcnI CCSGG 1 cut(s) 302
BcoDI GTCTC 4 cut(s) 341, 534, 824, 848
BfaI CTAG 3 cut(s) 186, 621, 881
BfmI CTRYAG 2 cut(s) 564, 1173
BfoI RGCGCY 1 cut(s) 628
BfuI GTATCC 1 cut(s) 480
BisI GCNGC 4 cut(s) 88, 141, 179, 253
BlpI GCTNAGC 1 cut(s) 83
BlsI GCNGC 4 cut(s) 89, 142, 180, 254
Bme1390I CCNGG 2 cut(s) 302, 598
Bme18I GGWCC 1 cut(s) 285
BmgT120I GGNCC 2 cut(s) 285, 299
BmiI GGNNCC 3 cut(s) 626, 1048, 1100
BmrFI CCNGG 2 cut(s) 302, 598
BmrI ACTGGG 2 cut(s) 26, 1104
BmsI GCATC 5 cut(s) 99, 252, 336, 524, 813
BmuI ACTGGG 2 cut(s) 26, 1104
BoxI GACNNNNGTC 1 cut(s) 987
Bpu1102I GCTNAGC 1 cut(s) 83
Bpu14I TTCGAA 1 cut(s) 632
BpuEI CTTGAG 4 cut(s) 341, 848, 1046, 1199
BpuMI CCSGG 1 cut(s) 302
BsaAI YACGTR 1 cut(s) 814
BsaHI GRCGYC 1 cut(s) 625
BsaJI CCNNGG 2 cut(s) 597, 668
BsaXI ACNNNNNCTCC 2 cut(s) 1068, 1098
Bsc4I CCNNNNNNNGG 2 cut(s) 479, 597
Bse1I ACTGG 6 cut(s) 32, 466, 495, 548, 874, 1099
BseBI CCWGG 1 cut(s) 598
BseDI CCNNGG 2 cut(s) 597, 668
BseGI GGATG 2 cut(s) 375, 828
BseLI CCNNNNNNNGG 2 cut(s) 479, 597
BseMII CTCAG 4 cut(s) 74, 165, 374, 699
BseNI ACTGG 6 cut(s) 32, 466, 495, 548, 874, 1099
BseRI GAGGAG 1 cut(s) 1073
BseXI GCAGC 3 cut(s) 99, 152, 190
BseYI CCCAGC 1 cut(s) 1016
BshFI GGCC 3 cut(s) 5, 300, 570
BshNI GGYRCC 1 cut(s) 624
BsiSI CCGG 1 cut(s) 302
BsiWI CGTACG 1 cut(s) 814
BslFI GGGAC 3 cut(s) 689, 975, 1140
BslI CCNNNNNNNGG 2 cut(s) 479, 597
BsmAI GTCTC 4 cut(s) 341, 534, 824, 848
BsmBI CGTCTC 2 cut(s) 341, 824
BsmFI GGGAC 3 cut(s) 689, 975, 1140
BsmI GAATGC 1 cut(s) 453
BsnI GGCC 3 cut(s) 5, 300, 570
Bsp119I TTCGAA 1 cut(s) 632
Bsp1286I GDGCHC 2 cut(s) 1049, 1158
Bsp143I GATC 6 cut(s) 96, 220, 424, 549, 931, 1059
Bsp1720I GCTNAGC 1 cut(s) 83
BspACI CCGC 2 cut(s) 120, 252
BspANI GGCC 3 cut(s) 5, 300, 570
BspCNI CTCAG 4 cut(s) 75, 166, 375, 700
BspHI TCATGA 1 cut(s) 979
BspLI GGNNCC 3 cut(s) 626, 1048, 1100
BspPI GGATC 3 cut(s) 544, 926, 1054
BspT104I TTCGAA 1 cut(s) 632
BspT107I GGYRCC 1 cut(s) 624
BsrI ACTGG 6 cut(s) 32, 466, 495, 548, 874, 1099
BssECI CCNNGG 2 cut(s) 597, 668
BssMI GATC 6 cut(s) 96, 220, 424, 549, 931, 1059
BssNAI GTATAC 1 cut(s) 1296
BssNI GRCGYC 1 cut(s) 625
BssSI CACGAG 1 cut(s) 582
BssT1I CCWWGG 1 cut(s) 668
Bst1107I GTATAC 1 cut(s) 1296
Bst2BI CACGAG 1 cut(s) 582
Bst2UI CCWGG 1 cut(s) 598
Bst4CI ACNGT 1 cut(s) 1135
Bst6I CTCTTC 1 cut(s) 1107
BstACI GRCGYC 1 cut(s) 625
BstBAI YACGTR 1 cut(s) 814
BstBI TTCGAA 1 cut(s) 632
BstC8I GCNNGC 2 cut(s) 183, 687
BstDEI CTNAG 5 cut(s) 83, 174, 383, 708, 738
BstF5I GGATG 2 cut(s) 375, 828
BstH2I RGCGCY 1 cut(s) 628
BstHHI GCGC 2 cut(s) 627, 667
BstKTI GATC 6 cut(s) 99, 223, 427, 552, 934, 1062
BstMAI GTCTC 4 cut(s) 341, 534, 824, 848
BstMBI GATC 6 cut(s) 96, 220, 424, 549, 931, 1059
BstMWI GCNNNNNNNGC 4 cut(s) 57, 149, 249, 1279
BstNI CCWGG 1 cut(s) 598
BstNSI RCATGY 1 cut(s) 797
BstPAI GACNNNNGTC 1 cut(s) 987
BstSCI CCNGG 2 cut(s) 300, 596
BstSFI CTRYAG 2 cut(s) 564, 1173
BstSNI TACGTA 1 cut(s) 814
BstV1I GCAGC 3 cut(s) 99, 152, 190
BstX2I RGATCY 1 cut(s) 1059
BstXI CCANNNNNNTGG 1 cut(s) 869
BstYI RGATCY 1 cut(s) 1059
BstZ17I GTATAC 1 cut(s) 1296
BsuI GTATCC 1 cut(s) 480
BsuRI GGCC 3 cut(s) 5, 300, 570
BtsCI GGATG 2 cut(s) 375, 828
BtsIMutI CAGTG 1 cut(s) 39
Cac8I GCNNGC 2 cut(s) 183, 687
CaiI CAGNNNCTG 1 cut(s) 597
CciI TCATGA 1 cut(s) 979
CfoI GCGC 2 cut(s) 627, 667
Cfr13I GGNCC 2 cut(s) 285, 299
Csp6I GTAC 5 cut(s) 262, 488, 811, 815, 1248
CviAII CATG 5 cut(s) 362, 407, 784, 794, 980
CviQI GTAC 5 cut(s) 262, 488, 811, 815, 1248
DdeI CTNAG 5 cut(s) 83, 174, 383, 708, 738
DinI GGCGCC 1 cut(s) 626
DpnI GATC 6 cut(s) 98, 222, 426, 551, 933, 1061
DpnII GATC 6 cut(s) 96, 220, 424, 549, 931, 1059
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 1107
EarI CTCTTC 1 cut(s) 1107
Eco105I TACGTA 1 cut(s) 814
Eco130I CCWWGG 1 cut(s) 668
Eco24I GRGCYC 2 cut(s) 1049, 1158
Eco47I GGWCC 1 cut(s) 285
Eco57I CTGAAG 1 cut(s) 326
EcoO109I RGGNCCY 1 cut(s) 285
EcoRII CCWGG 1 cut(s) 596
EcoT14I CCWWGG 1 cut(s) 668
EcoT38I GRGCYC 2 cut(s) 1049, 1158
EgeI GGCGCC 1 cut(s) 626
EheI GGCGCC 1 cut(s) 626
ErhI CCWWGG 1 cut(s) 668
Esp3I CGTCTC 2 cut(s) 341, 824
FaeI CATG 5 cut(s) 365, 410, 787, 797, 983
FaqI GGGAC 3 cut(s) 689, 975, 1140
FatI CATG 5 cut(s) 361, 406, 783, 793, 979
FbaI TGATCA 1 cut(s) 220
FblI GTMKAC 2 cut(s) 991, 1295
Fnu4HI GCNGC 4 cut(s) 88, 141, 179, 253
FokI GGATG 2 cut(s) 382, 835
FriOI GRGCYC 2 cut(s) 1049, 1158
Fsp4HI GCNGC 4 cut(s) 88, 141, 179, 253
FspBI CTAG 3 cut(s) 186, 621, 881
GlaI GCGC 2 cut(s) 626, 666
GluI GCNGC 4 cut(s) 88, 141, 179, 253
GsaI CCCAGC 1 cut(s) 1020
HaeII RGCGCY 1 cut(s) 628
HaeIII GGCC 3 cut(s) 5, 300, 570
HapII CCGG 1 cut(s) 302
HhaI GCGC 2 cut(s) 627, 667
Hin1I GRCGYC 1 cut(s) 625
Hin1II CATG 5 cut(s) 365, 410, 787, 797, 983
Hin6I GCGC 2 cut(s) 625, 665
HinP1I GCGC 2 cut(s) 625, 665
HincII GTYRAC 3 cut(s) 463, 748, 799
HindII GTYRAC 3 cut(s) 463, 748, 799
HinfI GANTC 8 cut(s) 65, 358, 378, 835, 856, 873, 976, 1021
HpaII CCGG 1 cut(s) 302
HphI GGTGA 3 cut(s) 613, 668, 851
Hpy166II GTNNAC 5 cut(s) 463, 748, 799, 992, 1296
Hpy188I TCNGA 6 cut(s) 201, 230, 554, 910, 1088, 1222
Hpy8I GTNNAC 5 cut(s) 463, 748, 799, 992, 1296
HpyAV CCTTC 2 cut(s) 242, 1309
HpyCH4III ACNGT 1 cut(s) 1135
HpyCH4IV ACGT 1 cut(s) 813
HpyCH4V TGCA 2 cut(s) 451, 587
HpyF10VI GCNNNNNNNGC 4 cut(s) 57, 149, 249, 1279
HpyF3I CTNAG 5 cut(s) 83, 174, 383, 708, 738
HpySE526I ACGT 1 cut(s) 813
Hsp92I GRCGYC 1 cut(s) 625
Hsp92II CATG 5 cut(s) 365, 410, 787, 797, 983
HspAI GCGC 2 cut(s) 625, 665
KasI GGCGCC 1 cut(s) 624
Ksp22I TGATCA 1 cut(s) 220
Kzo9I GATC 6 cut(s) 96, 220, 424, 549, 931, 1059
LmnI GCTCC 3 cut(s) 398, 1013, 1052
Lsp1109I GCAGC 3 cut(s) 99, 152, 190
LweI GCATC 5 cut(s) 99, 252, 336, 524, 813
MaeI CTAG 3 cut(s) 186, 621, 881
MaeII ACGT 1 cut(s) 813
MaeIII GTNAC 1 cut(s) 169
MalI GATC 6 cut(s) 98, 222, 426, 551, 933, 1061
MboI GATC 6 cut(s) 96, 220, 424, 549, 931, 1059
MboII GAAGA 6 cut(s) 36, 430, 535, 1069, 1124, 1153
MflI RGATCY 1 cut(s) 1059
MhlI GDGCHC 2 cut(s) 1049, 1158
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 2 cut(s) 1200, 1209
MluNI TGGCCA 1 cut(s) 5
Mly113I GGCGCC 1 cut(s) 625
MlyI GAGTC 3 cut(s) 59, 372, 850
MmeI TCCRAC 3 cut(s) 224, 253, 705
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
MseI TTAA 2 cut(s) 1203, 1327
MslI CAYNNNNRTG 2 cut(s) 599, 1107
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 143
MspI CCGG 1 cut(s) 302
MspR9I CCNGG 2 cut(s) 302, 598
Mva1269I GAATGC 1 cut(s) 453
MvaI CCWGG 1 cut(s) 598
MwoI GCNNNNNNNGC 4 cut(s) 57, 149, 249, 1279
NarI GGCGCC 1 cut(s) 625
NciI CCSGG 1 cut(s) 302
NdeII GATC 6 cut(s) 96, 220, 424, 549, 931, 1059
NlaIII CATG 5 cut(s) 365, 410, 787, 797, 983
NlaIV GGNNCC 3 cut(s) 626, 1048, 1100
NmuCI GTSAC 1 cut(s) 169
NspI RCATGY 1 cut(s) 797
NspV TTCGAA 1 cut(s) 632
OliI CACNNNNGTG 1 cut(s) 599
PagI TCATGA 1 cut(s) 979
PcsI WCGNNNNNNNCGW 1 cut(s) 252
PctI GAATGC 1 cut(s) 453
PfeI GAWTC 5 cut(s) 358, 835, 873, 976, 1021
Pfl23II CGTACG 1 cut(s) 814
PflFI GACNNNGTC 1 cut(s) 701
PflMI CCANNNNNTGG 1 cut(s) 597
PkrI GCNGC 4 cut(s) 89, 142, 180, 254
PleI GAGTC 3 cut(s) 59, 372, 850
PluTI GGCGCC 1 cut(s) 628
PpsI GAGTC 3 cut(s) 59, 372, 850
Ppu21I YACGTR 1 cut(s) 814
PpuMI RGGWCCY 1 cut(s) 285
PshAI GACNNNNGTC 1 cut(s) 987
Psp5II RGGWCCY 1 cut(s) 285
Psp6I CCWGG 1 cut(s) 596
PspFI CCCAGC 1 cut(s) 1016
PspGI CCWGG 1 cut(s) 596
PspLI CGTACG 1 cut(s) 814
PspN4I GGNNCC 3 cut(s) 626, 1048, 1100
PspPI GGNCC 2 cut(s) 285, 299
PspPPI RGGWCCY 1 cut(s) 285
PstNI CAGNNNCTG 1 cut(s) 597
PsuI RGATCY 1 cut(s) 1059
PsyI GACNNNGTC 1 cut(s) 701
PvuII CAGCTG 1 cut(s) 143
RsaI GTAC 5 cut(s) 263, 489, 812, 816, 1249
RsaNI GTAC 5 cut(s) 262, 488, 811, 815, 1248
RseI CAYNNNNRTG 2 cut(s) 599, 1107
SaqAI TTAA 2 cut(s) 1203, 1327
SatI GCNGC 4 cut(s) 88, 141, 179, 253
Sau3AI GATC 6 cut(s) 96, 220, 424, 549, 931, 1059
Sau96I GGNCC 2 cut(s) 285, 299
SchI GAGTC 3 cut(s) 59, 372, 850
ScrFI CCNGG 2 cut(s) 302, 598
SduI GDGCHC 2 cut(s) 1049, 1158
SfaNI GCATC 5 cut(s) 99, 252, 336, 524, 813
SfcI CTRYAG 2 cut(s) 564, 1173
SfoI GGCGCC 1 cut(s) 626
SfuI TTCGAA 1 cut(s) 632
SinI GGWCC 1 cut(s) 285
SmiMI CAYNNNNRTG 2 cut(s) 599, 1107
SmlI CTYRAG 4 cut(s) 320, 827, 1025, 1214
SmoI CTYRAG 4 cut(s) 320, 827, 1025, 1214
SnaBI TACGTA 1 cut(s) 814
Sse9I AATT 2 cut(s) 1200, 1209
SsiI CCGC 2 cut(s) 120, 252
SspDI GGCGCC 1 cut(s) 624
SspI AATATT 1 cut(s) 847
SspMI CTAG 3 cut(s) 186, 621, 881
StyD4I CCNGG 2 cut(s) 300, 596
StyI CCWWGG 1 cut(s) 668
TaaI ACNGT 1 cut(s) 1135
TaiI ACGT 1 cut(s) 816
TaqI TCGA 4 cut(s) 246, 498, 632, 1318
TasI AATT 2 cut(s) 1200, 1209
TauI GCSGC 1 cut(s) 255
TfiI GAWTC 5 cut(s) 358, 835, 873, 976, 1021
Tru1I TTAA 2 cut(s) 1203, 1327
Tru9I TTAA 2 cut(s) 1203, 1327
TscAI CASTG 1 cut(s) 39
TseFI GTSAC 1 cut(s) 169
TseI GCWGC 3 cut(s) 87, 140, 178
Tsp45I GTSAC 1 cut(s) 169
TspDTI ATGAA 8 cut(s) 423, 431, 548, 623, 664, 800, 1125, 1209
TspGWI ACGGA 3 cut(s) 205, 1014, 1144
TspRI CASTG 1 cut(s) 39
Tth111I GACNNNGTC 1 cut(s) 701
Van91I CCANNNNNTGG 1 cut(s) 597
VpaK11BI GGWCC 1 cut(s) 285
XceI RCATGY 1 cut(s) 797
XcmI CCANNNNNNNNNTGG 1 cut(s) 133
XmiI GTMKAC 2 cut(s) 991, 1295
XspI CTAG 3 cut(s) 186, 621, 881
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.