alpha-galactosidase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G26380 AT3G26380 |
| fragaria_vesca | FvH4_4g25930 |
| malus_domestica | MD13G1098300.v1.1 MD13G1098400.v1.1 MD16G1099400.v1.1 |
| prunus_persica | Prupe.1G247000_v2.0.a1 |
| pyrus_communis | pycom13g08600 pycom16g08460 |
| rosa_chinensis | RchiOBHm_Chr4g0433401 |
| rosa_laevigata | RLG00000006756 |
| rosa_multiflora | Rmu_sc0000759.1_g000006 |
| rosa_roxburghii | Rroxscaffold_5G00374950 |
| rosa_rugosa | Rorug04G0268500 |
| rosa_samantha | Rh4AG323300 Rh4BG331000 Rh4CG346300 Rh4DG327400 |
| rosa_wichuraiana | Rw4G028000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1027 |
| AccII | CGCG | 1 cut(s) | 81 |
| AciI | CCGC | 2 cut(s) | 92, 1913 |
| AclWI | GGATC | 6 cut(s) | 299, 518, 947, 1325, 1494, 1855 |
| AcoI | YGGCCR | 4 cut(s) | 765, 914, 1035, 1827 |
| AcsI | RAATTY | 2 cut(s) | 383, 1126 |
| AcuI | CTGAAG | 2 cut(s) | 369, 722 |
| AfaI | GTAC | 5 cut(s) | 366, 415, 672, 797, 1911 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 98, 459, 591, 1582 |
| AflIII | ACRYGT | 1 cut(s) | 792 |
| AgsI | TTSAA | 5 cut(s) | 382, 963, 1591, 1655, 1753 |
| AjnI | CCWGG | 7 cut(s) | 241, 739, 857, 955, 1037, 1214, 1410 |
| AluBI | AGCT | 6 cut(s) | 181, 1075, 1137, 1319, 1382, 1519 |
| AluI | AGCT | 6 cut(s) | 181, 1075, 1137, 1319, 1382, 1519 |
| Alw26I | GTCTC | 4 cut(s) | 13, 1047, 1063, 1277 |
| AlwI | GGATC | 6 cut(s) | 299, 518, 947, 1325, 1494, 1855 |
| AoxI | GGCC | 9 cut(s) | 293, 317, 582, 765, 914, 1035, 1185, 1624, 1827 |
| ApeKI | GCWGC | 6 cut(s) | 178, 356, 869, 872, 1379, 1922 |
| ApoI | RAATTY | 2 cut(s) | 383, 1126 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 635, 667 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 341, 1642 |
| AspLEI | GCGC | 2 cut(s) | 83, 575 |
| AspS9I | GGNCC | 4 cut(s) | 971, 1185, 1308, 1860 |
| AsuHPI | GGTGA | 6 cut(s) | 16, 46, 668, 1545, 1621, 1681 |
| AsuII | TTCGAA | 1 cut(s) | 1526 |
| AsuNHI | GCTAGC | 1 cut(s) | 83 |
| AvaII | GGWCC | 3 cut(s) | 971, 1308, 1860 |
| BalI | TGGCCA | 3 cut(s) | 767, 1037, 1829 |
| BauI | CACGAG | 1 cut(s) | 1673 |
| BbsI | GAAGAC | 3 cut(s) | 666, 1234, 1431 |
| BbvI | GCAGC | 6 cut(s) | 190, 368, 856, 859, 1391, 1909 |
| BccI | CCATC | 4 cut(s) | 936, 975, 1472, 1557 |
| BceAI | ACGGC | 3 cut(s) | 1172, 1368, 1670 |
| BciT130I | CCWGG | 7 cut(s) | 243, 741, 859, 957, 1039, 1216, 1412 |
| BclI | TGATCA | 1 cut(s) | 1201 |
| BcoDI | GTCTC | 4 cut(s) | 13, 1047, 1063, 1277 |
| BfaI | CTAG | 3 cut(s) | 84, 839, 902 |
| BfoI | RGCGCY | 1 cut(s) | 576 |
| BisI | GCNGC | 6 cut(s) | 179, 357, 870, 873, 1380, 1923 |
| BlsI | GCNGC | 6 cut(s) | 180, 358, 871, 874, 1381, 1924 |
| Bme1390I | CCNGG | 7 cut(s) | 243, 741, 859, 957, 1039, 1216, 1412 |
| Bme18I | GGWCC | 3 cut(s) | 971, 1308, 1860 |
| BmgT120I | GGNCC | 4 cut(s) | 971, 1185, 1308, 1860 |
| BmiI | GGNNCC | 3 cut(s) | 745, 889, 1603 |
| BmrFI | CCNGG | 7 cut(s) | 243, 741, 859, 957, 1039, 1216, 1412 |
| BmrI | ACTGGG | 1 cut(s) | 816 |
| BmsI | GCATC | 3 cut(s) | 525, 1279, 1558 |
| BmtI | GCTAGC | 1 cut(s) | 87 |
| BmuI | ACTGGG | 1 cut(s) | 816 |
| BpiI | GAAGAC | 3 cut(s) | 666, 1234, 1431 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1390, 1422, 1392, 1424 |
| BpmI | CTGGAG | 1 cut(s) | 1139 |
| Bpu14I | TTCGAA | 1 cut(s) | 1526 |
| BpuEI | CTTGAG | 3 cut(s) | 610, 1299, 1345 |
| Bsa29I | ATCGAT | 1 cut(s) | 279 |
| BsaI | GGTCTC | 2 cut(s) | 1047, 1277 |
| BsaJI | CCNNGG | 4 cut(s) | 373, 768, 858, 1605 |
| BsaWI | WCCGGW | 1 cut(s) | 1862 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 98, 459, 591, 1582 |
| Bse1I | ACTGG | 3 cut(s) | 811, 1167, 1723 |
| BseBI | CCWGG | 7 cut(s) | 243, 741, 859, 957, 1039, 1216, 1412 |
| BseCI | ATCGAT | 1 cut(s) | 279 |
| BseDI | CCNNGG | 4 cut(s) | 373, 768, 858, 1605 |
| BseGI | GGATG | 4 cut(s) | 540, 817, 947, 1573 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 98, 459, 591, 1582 |
| BseNI | ACTGG | 3 cut(s) | 811, 1167, 1723 |
| BseRI | GAGGAG | 1 cut(s) | 1035 |
| BseXI | GCAGC | 6 cut(s) | 190, 368, 856, 859, 1391, 1909 |
| BsgI | GTGCAG | 4 cut(s) | 1305, 1767, 1908, 1922 |
| Bsh1236I | CGCG | 1 cut(s) | 81 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1908 |
| BshFI | GGCC | 9 cut(s) | 295, 319, 584, 767, 916, 1037, 1187, 1626, 1829 |
| BshVI | ATCGAT | 1 cut(s) | 279 |
| BsiEI | CGRYCG | 1 cut(s) | 1908 |
| BsiSI | CCGG | 2 cut(s) | 917, 1863 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 98, 459, 591, 1582 |
| BsmAI | GTCTC | 4 cut(s) | 13, 1047, 1063, 1277 |
| BsnI | GGCC | 9 cut(s) | 295, 319, 584, 767, 916, 1037, 1187, 1626, 1829 |
| Bso31I | GGTCTC | 2 cut(s) | 1047, 1277 |
| Bsp119I | TTCGAA | 1 cut(s) | 1526 |
| BspACI | CCGC | 2 cut(s) | 92, 1913 |
| BspANI | GGCC | 9 cut(s) | 295, 319, 584, 767, 916, 1037, 1187, 1626, 1829 |
| BspDI | ATCGAT | 1 cut(s) | 279 |
| BspFNI | CGCG | 1 cut(s) | 81 |
| BspHI | TCATGA | 2 cut(s) | 399, 549 |
| BspLI | GGNNCC | 3 cut(s) | 745, 889, 1603 |
| BspOI | GCTAGC | 1 cut(s) | 87 |
| BspPI | GGATC | 6 cut(s) | 299, 518, 947, 1325, 1494, 1855 |
| BspT104I | TTCGAA | 1 cut(s) | 1526 |
| BspTNI | GGTCTC | 2 cut(s) | 1047, 1277 |
| BsrI | ACTGG | 3 cut(s) | 811, 1167, 1723 |
| BssECI | CCNNGG | 4 cut(s) | 373, 768, 858, 1605 |
| BssSI | CACGAG | 1 cut(s) | 1673 |
| BssT1I | CCWWGG | 2 cut(s) | 768, 1605 |
| Bst2BI | CACGAG | 1 cut(s) | 1673 |
| Bst2UI | CCWGG | 7 cut(s) | 243, 741, 859, 957, 1039, 1216, 1412 |
| Bst4CI | ACNGT | 7 cut(s) | 609, 647, 716, 800, 971, 1114, 1943 |
| Bst6I | CTCTTC | 2 cut(s) | 26, 138 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 428 |
| BstBI | TTCGAA | 1 cut(s) | 1526 |
| BstC8I | GCNNGC | 4 cut(s) | 85, 899, 1500, 1702 |
| BstDEI | CTNAG | 4 cut(s) | 664, 922, 947, 1873 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 589 |
| BstF5I | GGATG | 4 cut(s) | 540, 817, 947, 1573 |
| BstFNI | CGCG | 1 cut(s) | 81 |
| BstH2I | RGCGCY | 1 cut(s) | 576 |
| BstHHI | GCGC | 2 cut(s) | 83, 575 |
| BstMAI | GTCTC | 4 cut(s) | 13, 1047, 1063, 1277 |
| BstMCI | CGRYCG | 1 cut(s) | 1908 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 353, 428, 581, 1012, 1250, 1790 |
| BstNI | CCWGG | 7 cut(s) | 243, 741, 859, 957, 1039, 1216, 1412 |
| BstNSI | RCATGY | 3 cut(s) | 796, 1265, 1502 |
| BstSCI | CCNGG | 7 cut(s) | 241, 739, 857, 955, 1037, 1214, 1410 |
| BstUI | CGCG | 1 cut(s) | 81 |
| BstV1I | GCAGC | 6 cut(s) | 190, 368, 856, 859, 1391, 1909 |
| BstV2I | GAAGAC | 3 cut(s) | 666, 1234, 1431 |
| BstX2I | RGATCY | 1 cut(s) | 1330 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 315, 942, 981 |
| BstYI | RGATCY | 1 cut(s) | 1330 |
| Bsu15I | ATCGAT | 1 cut(s) | 279 |
| BsuRI | GGCC | 9 cut(s) | 295, 319, 584, 767, 916, 1037, 1187, 1626, 1829 |
| BsuTUI | ATCGAT | 1 cut(s) | 279 |
| BtsCI | GGATG | 4 cut(s) | 540, 817, 947, 1573 |
| BtsIMutI | CAGTG | 2 cut(s) | 1925, 1939 |
| Cac8I | GCNNGC | 4 cut(s) | 85, 899, 1500, 1702 |
| CciI | TCATGA | 2 cut(s) | 399, 549 |
| CfoI | GCGC | 2 cut(s) | 83, 575 |
| Cfr13I | GGNCC | 4 cut(s) | 971, 1185, 1308, 1860 |
| ClaI | ATCGAT | 1 cut(s) | 279 |
| CseI | GACGC | 1 cut(s) | 1898 |
| Csp6I | GTAC | 5 cut(s) | 365, 414, 671, 796, 1910 |
| CviQI | GTAC | 5 cut(s) | 365, 414, 671, 796, 1910 |
| DdeI | CTNAG | 4 cut(s) | 664, 922, 947, 1873 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1027 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1027 |
| EaeI | YGGCCR | 4 cut(s) | 765, 914, 1035, 1827 |
| Eam1104I | CTCTTC | 2 cut(s) | 26, 138 |
| EarI | CTCTTC | 2 cut(s) | 26, 138 |
| Eco130I | CCWWGG | 2 cut(s) | 768, 1605 |
| Eco147I | AGGCCT | 1 cut(s) | 584 |
| Eco31I | GGTCTC | 2 cut(s) | 1047, 1277 |
| Eco47I | GGWCC | 3 cut(s) | 971, 1308, 1860 |
| Eco57I | CTGAAG | 2 cut(s) | 369, 722 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 589 |
| EcoRII | CCWGG | 7 cut(s) | 241, 739, 857, 955, 1037, 1214, 1410 |
| EcoT14I | CCWWGG | 2 cut(s) | 768, 1605 |
| ErhI | CCWWGG | 2 cut(s) | 768, 1605 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 572, 604 |
| FauI | CCCGC | 1 cut(s) | 99 |
| FbaI | TGATCA | 1 cut(s) | 1201 |
| Fnu4HI | GCNGC | 6 cut(s) | 179, 357, 870, 873, 1380, 1923 |
| FokI | GGATG | 4 cut(s) | 547, 824, 954, 1580 |
| Fsp4HI | GCNGC | 6 cut(s) | 179, 357, 870, 873, 1380, 1923 |
| FspBI | CTAG | 3 cut(s) | 84, 839, 902 |
| GlaI | GCGC | 2 cut(s) | 82, 574 |
| GluI | GCNGC | 6 cut(s) | 179, 357, 870, 873, 1380, 1923 |
| GsuI | CTGGAG | 1 cut(s) | 1139 |
| HaeII | RGCGCY | 1 cut(s) | 576 |
| HaeIII | GGCC | 9 cut(s) | 295, 319, 584, 767, 916, 1037, 1187, 1626, 1829 |
| HapII | CCGG | 2 cut(s) | 917, 1863 |
| HgaI | GACGC | 1 cut(s) | 1898 |
| HhaI | GCGC | 2 cut(s) | 83, 575 |
| Hin6I | GCGC | 2 cut(s) | 81, 573 |
| HinP1I | GCGC | 2 cut(s) | 81, 573 |
| HincII | GTYRAC | 1 cut(s) | 790 |
| HindII | GTYRAC | 1 cut(s) | 790 |
| HindIII | AAGCTT | 1 cut(s) | 1517 |
| HinfI | GANTC | 8 cut(s) | 116, 257, 391, 697, 821, 1403, 1643, 1676 |
| HpaII | CCGG | 2 cut(s) | 917, 1863 |
| HphI | GGTGA | 6 cut(s) | 16, 46, 668, 1545, 1621, 1681 |
| Hpy166II | GTNNAC | 5 cut(s) | 54, 416, 790, 974, 1210 |
| Hpy188I | TCNGA | 5 cut(s) | 139, 694, 702, 1236, 1852 |
| Hpy8I | GTNNAC | 5 cut(s) | 54, 416, 790, 974, 1210 |
| Hpy99I | CGWCG | 2 cut(s) | 328, 1892 |
| HpyAV | CCTTC | 6 cut(s) | 194, 330, 595, 1450, 1522, 1649 |
| HpyCH4III | ACNGT | 7 cut(s) | 609, 647, 716, 800, 971, 1114, 1943 |
| HpyCH4IV | ACGT | 2 cut(s) | 1161, 1533 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 353, 428, 581, 1012, 1250, 1790 |
| HpyF3I | CTNAG | 4 cut(s) | 664, 922, 947, 1873 |
| HpySE526I | ACGT | 2 cut(s) | 1161, 1533 |
| HspAI | GCGC | 2 cut(s) | 81, 573 |
| Ksp22I | TGATCA | 1 cut(s) | 1201 |
| LmnI | GCTCC | 3 cut(s) | 186, 887, 1003 |
| Lsp1109I | GCAGC | 6 cut(s) | 190, 368, 856, 859, 1391, 1909 |
| LweI | GCATC | 3 cut(s) | 525, 1279, 1558 |
| MaeI | CTAG | 3 cut(s) | 84, 839, 902 |
| MaeII | ACGT | 2 cut(s) | 1161, 1533 |
| MaeIII | GTNAC | 6 cut(s) | 594, 751, 853, 1084, 1162, 1687 |
| MboII | GAAGA | 6 cut(s) | 13, 155, 495, 671, 1239, 1436 |
| MfeI | CAATTG | 1 cut(s) | 1299 |
| MflI | RGATCY | 1 cut(s) | 1330 |
| MlsI | TGGCCA | 3 cut(s) | 767, 1037, 1829 |
| MluNI | TGGCCA | 3 cut(s) | 767, 1037, 1829 |
| MlyI | GAGTC | 2 cut(s) | 110, 1685 |
| MmeI | TCCRAC | 1 cut(s) | 83 |
| Mox20I | TGGCCA | 3 cut(s) | 767, 1037, 1829 |
| MroXI | GAANNNNTTC | 2 cut(s) | 341, 1642 |
| MscI | TGGCCA | 3 cut(s) | 767, 1037, 1829 |
| MseI | TTAA | 5 cut(s) | 998, 1077, 1391, 1536, 1667 |
| MslI | CAYNNNNRTG | 4 cut(s) | 195, 849, 940, 979 |
| Msp20I | TGGCCA | 3 cut(s) | 767, 1037, 1829 |
| MspI | CCGG | 2 cut(s) | 917, 1863 |
| MspR9I | CCNGG | 7 cut(s) | 243, 741, 859, 957, 1039, 1216, 1412 |
| MunI | CAATTG | 1 cut(s) | 1299 |
| MvaI | CCWGG | 7 cut(s) | 243, 741, 859, 957, 1039, 1216, 1412 |
| MvnI | CGCG | 1 cut(s) | 81 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 353, 428, 581, 1012, 1250, 1790 |
| NheI | GCTAGC | 1 cut(s) | 83 |
| NlaIV | GGNNCC | 3 cut(s) | 745, 889, 1603 |
| NmeAIII | GCCGAG | 1 cut(s) | 120 |
| NmuCI | GTSAC | 3 cut(s) | 594, 1084, 1687 |
| NspI | RCATGY | 3 cut(s) | 796, 1265, 1502 |
| NspV | TTCGAA | 1 cut(s) | 1526 |
| PaeI | GCATGC | 1 cut(s) | 1502 |
| PagI | TCATGA | 2 cut(s) | 399, 549 |
| PceI | AGGCCT | 1 cut(s) | 584 |
| PciI | ACATGT | 1 cut(s) | 792 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 116 |
| PdmI | GAANNNNTTC | 2 cut(s) | 341, 1642 |
| PfeI | GAWTC | 6 cut(s) | 257, 391, 697, 821, 1403, 1643 |
| PflFI | GACNNNGTC | 1 cut(s) | 1799 |
| PfoI | TCCNGGA | 1 cut(s) | 739 |
| PkrI | GCNGC | 6 cut(s) | 180, 358, 871, 874, 1381, 1924 |
| PleI | GAGTC | 2 cut(s) | 110, 1684 |
| PpsI | GAGTC | 2 cut(s) | 110, 1684 |
| PscI | ACATGT | 1 cut(s) | 792 |
| Psp6I | CCWGG | 7 cut(s) | 241, 739, 857, 955, 1037, 1214, 1410 |
| PspGI | CCWGG | 7 cut(s) | 241, 739, 857, 955, 1037, 1214, 1410 |
| PspN4I | GGNNCC | 3 cut(s) | 745, 889, 1603 |
| PspPI | GGNCC | 4 cut(s) | 971, 1185, 1308, 1860 |
| PsuI | RGATCY | 1 cut(s) | 1330 |
| PsyI | GACNNNGTC | 1 cut(s) | 1799 |
| RsaI | GTAC | 5 cut(s) | 366, 415, 672, 797, 1911 |
| RsaNI | GTAC | 5 cut(s) | 365, 414, 671, 796, 1910 |
| RseI | CAYNNNNRTG | 4 cut(s) | 195, 849, 940, 979 |
| SaqAI | TTAA | 5 cut(s) | 998, 1077, 1391, 1536, 1667 |
| SatI | GCNGC | 6 cut(s) | 179, 357, 870, 873, 1380, 1923 |
| Sau96I | GGNCC | 4 cut(s) | 971, 1185, 1308, 1860 |
| SchI | GAGTC | 2 cut(s) | 110, 1685 |
| ScrFI | CCNGG | 7 cut(s) | 243, 741, 859, 957, 1039, 1216, 1412 |
| SfaNI | GCATC | 3 cut(s) | 525, 1279, 1558 |
| SfuI | TTCGAA | 1 cut(s) | 1526 |
| SinI | GGWCC | 3 cut(s) | 971, 1308, 1860 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 195, 849, 940, 979 |
| SmlI | CTYRAG | 3 cut(s) | 589, 1314, 1360 |
| SmoI | CTYRAG | 3 cut(s) | 589, 1314, 1360 |
| SphI | GCATGC | 1 cut(s) | 1502 |
| SseBI | AGGCCT | 1 cut(s) | 584 |
| SsiI | CCGC | 2 cut(s) | 92, 1913 |
| SspMI | CTAG | 3 cut(s) | 84, 839, 902 |
| StuI | AGGCCT | 1 cut(s) | 584 |
| StyD4I | CCNGG | 7 cut(s) | 241, 739, 857, 955, 1037, 1214, 1410 |
| StyI | CCWWGG | 2 cut(s) | 768, 1605 |
| TaaI | ACNGT | 7 cut(s) | 609, 647, 716, 800, 971, 1114, 1943 |
| TaiI | ACGT | 2 cut(s) | 1164, 1536 |
| TaqI | TCGA | 4 cut(s) | 279, 326, 1526, 1761 |
| TaqII | GACCGA | 2 cut(s) | 35, 1894 |
| TatI | WGTACW | 2 cut(s) | 364, 413 |
| TfiI | GAWTC | 6 cut(s) | 257, 391, 697, 821, 1403, 1643 |
| Tru1I | TTAA | 5 cut(s) | 998, 1077, 1391, 1536, 1667 |
| Tru9I | TTAA | 5 cut(s) | 998, 1077, 1391, 1536, 1667 |
| TscAI | CASTG | 2 cut(s) | 1932, 1946 |
| TseFI | GTSAC | 3 cut(s) | 594, 1084, 1687 |
| TseI | GCWGC | 6 cut(s) | 178, 356, 869, 872, 1379, 1922 |
| Tsp45I | GTSAC | 3 cut(s) | 594, 1084, 1687 |
| TspDTI | ATGAA | 6 cut(s) | 17, 383, 538, 813, 1146, 1437 |
| TspGWI | ACGGA | 3 cut(s) | 1448, 1499, 1614 |
| TspRI | CASTG | 2 cut(s) | 1932, 1946 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1799 |
| VpaK11BI | GGWCC | 3 cut(s) | 971, 1308, 1860 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 589 |
| XapI | RAATTY | 2 cut(s) | 383, 1126 |
| XceI | RCATGY | 3 cut(s) | 796, 1265, 1502 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1603 |
| XmnI | GAANNNNTTC | 2 cut(s) | 341, 1642 |
| XspI | CTAG | 3 cut(s) | 84, 839, 902 |