Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000759.1

Orthogroup ID

OG0012236

Physical Location & Seq

Genomic Coordinates Reverse (-)

32453 .. 36535

Gene Structure 4083 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000759.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1926 bp

atgaagaaaatcttagctttcagttttctctgcttgttcctcggttttcacatccagagggtatcatcatcacaagaacatgctagcaccccacccagaggttggaattcctatgactccttttgttggactatttccgagaaagagttcttggaaagtgctgatatcatagctaagcagctacttccacatggatatgagtatgctgttgtcgattacctatggtataggagaaaggttccaggcgcttacgttgattctctaggatttgatgtaatcgaccaatgggggaggcccatacctgacccaggtaggtggccttcctccaaaggtgggaatgggttcactgaagtggcatcaaaagtacatcagctgggtttgaagtttgggattcatcttatgagaggaattagtactcaggcagtaaatgcgaatacccctatcttggatgtcaccaaggggactgcttatgaagagtctggaagaacatggactgcaaaagacatagggatcaaggaaaggcgttgcgcatggatgcaaaatggtttcatgagtgtgaatactacattgggtgctgggaaggccttcttaagatcactttatcgacagtatgacgagtggggtgttgattttgtgaaaaatgattgtgtgtttggtgaagacatagatgtaggtgaaataaccgttgtgtcggaggttctaaagcaacttgaccatcctgtggtgtattctctctctcctggaacccaagcaacacctgcgctggccaaagatctaactggtatagtcaatatgtaccgtataacaggggatgattgggacacatgggacgatgttgtagcccattttgacgttaccagggattttgctgctgcgaatttgataggagctaatggcttgctgggaaagtcatggcctgacttagatatgctccccctgggatggcttaccgatccaggttcaaatgaaggtccacacagacaaacgaaactcactttagacgagcaaagaactcagatgactttgtggtctattgccaagtctcctctcatgtttggaggggatgtgagaaagcttgatgatgccacaactagtctcatcacaaatcctaccttgctgaaaattaattcatttagctccaacaataaggagtttccattgatttcaagtacttcgggtaagagggacgtcaagaatgatgatctggttaacacctggcaatcaagaagacaattaaaaagtttaaagacttcagattcagatgttcttggtctcactagctgtgcagatgagaaagcaattgggtggtccactaaagctcttgaccaagatcttgaacacatctgctggaaagaacactcgagaaagaaataccagacacctttttgcttaaacaagagagaatctcttttggcattagaagacgacataatgtacaaacagcaataccaggggaaggtcaatttgttagctagtgacagggaggacatgtgcttgcatggttctccaaaacgaaagcttacttcgaaagatctaaagagaggtttcttttcaccttgcagatgggatgcaaatcagatgtgggagttgaatcccaatggaaccttggcaaatagctattctggcctatgtgcaacagtaaattcttttaaagctaaagccaattctgaaggagctcgtgcttggatagccaccggaaaacaaggagaaatatatgttgcttttttcaacctgaactcagcaaaaactactataactgcacaaaaatcagacttggcgaaagcacttcccggctcgagagtaactgcaggttcctgcaaagccgcagaagtatggagcggacaagatttggggatcatagaccagaccatatcatttggtgtagaaactcatgggactgctctatttgttctacagtgtagttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004557 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005984 GO:0005994 GO:0005995 GO:0006629 GO:0006643 GO:0006664 GO:0006665 GO:0006672 GO:0006677 GO:0006687 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009311 GO:0009313 GO:0009987 GO:0015925 GO:0016042 GO:0016052 GO:0016137 GO:0016139 GO:0016787 GO:0016798 GO:0019377 GO:0030149 GO:0034641 GO:0043603 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044262 GO:0044275 GO:0044424 GO:0044464 GO:0046352 GO:0046466 GO:0046477 GO:0046479 GO:0046514 GO:0071704 GO:1901135 GO:1901136 GO:1901564 GO:1901565 GO:1901575 GO:1901657 GO:1901658 GO:1903509

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Melibiase_2

Protein Analysis

641

Amino Acids

71.31

Weight (kDa)

6.65

Isoelectric Point (pI)

31.21

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012236)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G26380 AT3G26380
fragaria_vesca	FvH4_4g25930
malus_domestica	MD13G1098300.v1.1 MD13G1098400.v1.1 MD16G1099400.v1.1
prunus_persica	Prupe.1G247000_v2.0.a1
pyrus_communis	pycom13g08600 pycom16g08460
rosa_chinensis	RchiOBHm_Chr4g0433401
rosa_laevigata	RLG00000006756
rosa_multiflora	Rmu_sc0000759.1_g000006
rosa_roxburghii	Rroxscaffold_5G00374950
rosa_rugosa	Rorug04G0268500
rosa_samantha	Rh4AG323300 Rh4BG331000 Rh4CG346300 Rh4DG327400
rosa_wichuraiana	Rw4G028000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	766
AasI	GACNNNNNNGTC	1 cut(s)	1027
AatII	GACGTC	1 cut(s)	1191
Acc16I	TGCGCA	1 cut(s)	529
Acc36I	ACCTGC	2 cut(s)	766, 1799
AccB7I	CCANNNNNTGG	2 cut(s)	102, 721
AccBSI	CCGCTC	1 cut(s)	1839
AciI	CCGC	2 cut(s)	1824, 1839
AclWI	GGATC	3 cut(s)	518, 947, 1862
AcoI	YGGCCR	1 cut(s)	765
AcsI	RAATTY	3 cut(s)	106, 877, 1642
AcuI	CTGAAG	3 cut(s)	369, 1236, 1689
AcyI	GRCGYC	1 cut(s)	1188
AfaI	GTAC	5 cut(s)	366, 415, 797, 1171, 1436
AfiI	CCNNNNNNNGG	9 cut(s)	98, 102, 126, 308, 333, 445, 721, 942, 1456
AflII	CTTAAG	1 cut(s)	589
AflIII	ACRYGT	1 cut(s)	1488
AgsI	TTSAA	6 cut(s)	382, 963, 1167, 1337, 1591, 1729
AhlI	ACTAGT	1 cut(s)	1091
AjnI	CCWGG	8 cut(s)	241, 307, 739, 857, 936, 955, 1214, 1449
AjuI	GAANNNNNNNTTGG	4 cut(s)	134, 166, 551, 583
AleI	CACNNNNGTG	1 cut(s)	350
Alw21I	GWGCWC	1 cut(s)	1678
Alw26I	GTCTC	3 cut(s)	1047, 1100, 1277
AlwI	GGATC	3 cut(s)	518, 947, 1862
Ama87I	CYCGRG	2 cut(s)	1360, 1795
AoxI	GGCC	6 cut(s)	293, 317, 582, 765, 914, 1624
ApeKI	GCWGC	3 cut(s)	178, 869, 872
ApoI	RAATTY	3 cut(s)	106, 877, 1642
AseI	ATTAAT	1 cut(s)	1125
Asp700I	GAANNNNTTC	3 cut(s)	146, 341, 584
AspLEI	GCGC	3 cut(s)	248, 530, 763
AspS9I	GGNCC	3 cut(s)	294, 971, 1308
AsuC2I	CCSGG	1 cut(s)	1791
AsuHPI	GGTGA	4 cut(s)	445, 668, 686, 1545
AsuII	TTCGAA	1 cut(s)	1526
AsuNHI	GCTAGC	1 cut(s)	83
AvaI	CYCGRG	2 cut(s)	1360, 1795
AvaII	GGWCC	2 cut(s)	971, 1308
BalI	TGGCCA	1 cut(s)	767
BanII	GRGCYC	1 cut(s)	1678
BarI	GAAGNNNNNNTAC	2 cut(s)	304, 336
BauI	CACGAG	1 cut(s)	1677
BbsI	GAAGAC	3 cut(s)	666, 1234, 1428
Bbv12I	GWGCWC	1 cut(s)	1678
BbvI	GCAGC	3 cut(s)	190, 856, 859
BccI	CCATC	3 cut(s)	723, 936, 1557
BciT130I	CCWGG	8 cut(s)	243, 309, 741, 859, 938, 957, 1216, 1451
BcnI	CCSGG	1 cut(s)	1791
BcoDI	GTCTC	3 cut(s)	1047, 1100, 1277
BcuI	ACTAGT	1 cut(s)	1091
BfaI	CTAG	5 cut(s)	84, 263, 1092, 1278, 1473
BfmI	CTRYAG	2 cut(s)	1806, 1913
BfoI	RGCGCY	1 cut(s)	249
BfrI	CTTAAG	1 cut(s)	589
BfuAI	ACCTGC	2 cut(s)	766, 1799
BglII	AGATCT	3 cut(s)	772, 1330, 1531
BisI	GCNGC	4 cut(s)	179, 870, 873, 1824
BlpI	GCTNAGC	1 cut(s)	174
BlsI	GCNGC	4 cut(s)	180, 871, 874, 1825
BmcAI	AGTACT	2 cut(s)	415, 1171
Bme1390I	CCNGG	9 cut(s)	243, 309, 741, 859, 938, 957, 1216, 1451, 1791
Bme18I	GGWCC	2 cut(s)	971, 1308
BmeT110I	CYCGRG	2 cut(s)	1360, 1795
BmgT120I	GGNCC	3 cut(s)	294, 971, 1308
BmiI	GGNNCC	4 cut(s)	240, 745, 1603, 1813
BmrFI	CCNGG	9 cut(s)	243, 309, 741, 859, 938, 957, 1216, 1451, 1791
BmsI	GCATC	4 cut(s)	365, 525, 1072, 1558
BmtI	GCTAGC	1 cut(s)	87
BpiI	GAAGAC	3 cut(s)	666, 1234, 1428
BplI	GAGNNNNNCTC	2 cut(s)	1390, 1422
Bpu1102I	GCTNAGC	1 cut(s)	174
Bpu14I	TTCGAA	1 cut(s)	1526
BpuMI	CCSGG	1 cut(s)	1791
BsaBI	GATNNNNATC	1 cut(s)	1572
BsaHI	GRCGYC	1 cut(s)	1188
BsaI	GGTCTC	1 cut(s)	1277
BsaJI	CCNNGG	8 cut(s)	40, 307, 456, 858, 936, 937, 1450, 1605
BsaWI	WCCGGW	1 cut(s)	1694
BsaXI	ACNNNNNCTCC	4 cut(s)	1050, 1080, 1475, 1505
Bsc4I	CCNNNNNNNGG	9 cut(s)	98, 102, 126, 308, 333, 445, 721, 942, 1456
Bse1I	ACTGG	1 cut(s)	784
Bse8I	GATNNNNATC	1 cut(s)	1572
BseBI	CCWGG	8 cut(s)	243, 309, 741, 859, 938, 957, 1216, 1451
BseDI	CCNNGG	8 cut(s)	40, 307, 456, 858, 936, 937, 1450, 1605
BseGI	GGATG	8 cut(s)	51, 454, 540, 715, 817, 947, 1069, 1573
BseJI	GATNNNNATC	1 cut(s)	1572
BseLI	CCNNNNNNNGG	9 cut(s)	98, 102, 126, 308, 333, 445, 721, 942, 1456
BseMII	CTCAG	3 cut(s)	431, 1028, 1752
BseNI	ACTGG	1 cut(s)	784
BseRI	GAGGAG	1 cut(s)	1035
BseXI	GCAGC	3 cut(s)	190, 856, 859
BseYI	CCCAGC	3 cut(s)	373, 575, 901
BsgI	GTGCAG	2 cut(s)	1305, 1743
BshFI	GGCC	6 cut(s)	295, 319, 584, 767, 916, 1626
BsiHKAI	GWGCWC	1 cut(s)	1678
BsiHKCI	CYCGRG	2 cut(s)	1360, 1795
BsiSI	CCGG	2 cut(s)	1695, 1791
BslFI	GGGAC	5 cut(s)	475, 833, 842, 1199, 1909
BslI	CCNNNNNNNGG	9 cut(s)	98, 102, 126, 308, 333, 445, 721, 942, 1456
BsmAI	GTCTC	3 cut(s)	1047, 1100, 1277
BsmFI	GGGAC	5 cut(s)	475, 833, 842, 1199, 1909
BsnI	GGCC	6 cut(s)	295, 319, 584, 767, 916, 1626
Bso31I	GGTCTC	1 cut(s)	1277
BsoBI	CYCGRG	2 cut(s)	1360, 1795
Bsp119I	TTCGAA	1 cut(s)	1526
Bsp1286I	GDGCHC	1 cut(s)	1678
Bsp1407I	TGTACA	1 cut(s)	1434
Bsp143I	GATC	8 cut(s)	510, 593, 772, 952, 1201, 1330, 1531, 1854
Bsp1720I	GCTNAGC	1 cut(s)	174
BspACI	CCGC	2 cut(s)	1824, 1839
BspANI	GGCC	6 cut(s)	295, 319, 584, 767, 916, 1626
BspCNI	CTCAG	3 cut(s)	430, 1027, 1751
BspHI	TCATGA	1 cut(s)	549
BspLI	GGNNCC	4 cut(s)	240, 745, 1603, 1813
BspMAI	CTGCAG	1 cut(s)	1810
BspMI	ACCTGC	2 cut(s)	766, 1799
BspOI	GCTAGC	1 cut(s)	87
BspPI	GGATC	3 cut(s)	518, 947, 1862
BspT104I	TTCGAA	1 cut(s)	1526
BspTI	CTTAAG	1 cut(s)	589
BspTNI	GGTCTC	1 cut(s)	1277
BsrBI	CCGCTC	1 cut(s)	1839
BsrGI	TGTACA	1 cut(s)	1434
BsrI	ACTGG	1 cut(s)	784
BssECI	CCNNGG	8 cut(s)	40, 307, 456, 858, 936, 937, 1450, 1605
BssMI	GATC	8 cut(s)	510, 593, 772, 952, 1201, 1330, 1531, 1854
BssNI	GRCGYC	1 cut(s)	1188
BssSI	CACGAG	1 cut(s)	1677
BssT1I	CCWWGG	2 cut(s)	456, 1605
Bst2BI	CACGAG	1 cut(s)	1677
Bst2UI	CCWGG	8 cut(s)	243, 309, 741, 859, 938, 957, 1216, 1451
Bst4CI	ACNGT	5 cut(s)	609, 685, 800, 1639, 1917
Bst6I	CTCTTC	1 cut(s)	468
BstACI	GRCGYC	1 cut(s)	1188
BstAFI	CTTAAG	1 cut(s)	589
BstAPI	GCANNNNNTGC	2 cut(s)	428, 758
BstAUI	TGTACA	1 cut(s)	1434
BstBI	TTCGAA	1 cut(s)	1526
BstC8I	GCNNGC	4 cut(s)	85, 765, 899, 1496
BstDEI	CTNAG	6 cut(s)	13, 174, 417, 922, 1014, 1738
BstENI	CCTNNNNNAGG	1 cut(s)	306
BstF5I	GGATG	8 cut(s)	51, 454, 540, 715, 817, 947, 1069, 1573
BstH2I	RGCGCY	1 cut(s)	249
BstHHI	GCGC	3 cut(s)	248, 530, 763
BstKTI	GATC	8 cut(s)	513, 596, 775, 955, 1204, 1333, 1534, 1857
BstMAI	GTCTC	3 cut(s)	1047, 1100, 1277
BstMBI	GATC	8 cut(s)	510, 593, 772, 952, 1201, 1330, 1531, 1854
BstMWI	GCNNNNNNNGC	5 cut(s)	428, 581, 758, 1623, 1688
BstNI	CCWGG	8 cut(s)	243, 309, 741, 859, 938, 957, 1216, 1451
BstNSI	RCATGY	2 cut(s)	83, 1492
BstSCI	CCNGG	9 cut(s)	241, 307, 739, 857, 936, 955, 1214, 1449, 1789
BstSFI	CTRYAG	2 cut(s)	1806, 1913
BstV1I	GCAGC	3 cut(s)	190, 856, 859
BstV2I	GAAGAC	3 cut(s)	666, 1234, 1428
BstX2I	RGATCY	3 cut(s)	772, 1330, 1531
BstXI	CCANNNNNNTGG	1 cut(s)	315
BstYI	RGATCY	3 cut(s)	772, 1330, 1531
BsuRI	GGCC	6 cut(s)	295, 319, 584, 767, 916, 1626
BtsCI	GGATG	8 cut(s)	51, 454, 540, 715, 817, 947, 1069, 1573
BtsIMutI	CAGTG	2 cut(s)	345, 1922
BveI	ACCTGC	2 cut(s)	766, 1799
Cac8I	GCNNGC	4 cut(s)	85, 765, 899, 1496
CciI	TCATGA	1 cut(s)	549
CfoI	GCGC	3 cut(s)	248, 530, 763
Cfr13I	GGNCC	3 cut(s)	294, 971, 1308
Csp6I	GTAC	5 cut(s)	365, 414, 796, 1170, 1435
CviQI	GTAC	5 cut(s)	365, 414, 796, 1170, 1435
DdeI	CTNAG	6 cut(s)	13, 174, 417, 922, 1014, 1738
DpnI	GATC	8 cut(s)	512, 595, 774, 954, 1203, 1332, 1533, 1856
DpnII	GATC	8 cut(s)	510, 593, 772, 952, 1201, 1330, 1531, 1854
DraI	TTTAAA	2 cut(s)	1245, 1651
DrdI	GACNNNNNNGTC	1 cut(s)	1027
DseDI	GACNNNNNNGTC	1 cut(s)	1027
EaeI	YGGCCR	1 cut(s)	765
Eam1104I	CTCTTC	1 cut(s)	468
EarI	CTCTTC	1 cut(s)	468
Ecl136II	GAGCTC	1 cut(s)	1676
Eco130I	CCWWGG	2 cut(s)	456, 1605
Eco147I	AGGCCT	1 cut(s)	584
Eco24I	GRGCYC	1 cut(s)	1678
Eco31I	GGTCTC	1 cut(s)	1277
Eco32I	GATATC	1 cut(s)	166
Eco47I	GGWCC	2 cut(s)	971, 1308
Eco53kI	GAGCTC	1 cut(s)	1676
Eco57I	CTGAAG	3 cut(s)	369, 1236, 1689
Eco88I	CYCGRG	2 cut(s)	1360, 1795
EcoICRI	GAGCTC	1 cut(s)	1676
EcoNI	CCTNNNNNAGG	1 cut(s)	306
EcoRI	GAATTC	1 cut(s)	106
EcoRII	CCWGG	8 cut(s)	241, 307, 739, 857, 936, 955, 1214, 1449
EcoRV	GATATC	1 cut(s)	166
EcoT14I	CCWWGG	2 cut(s)	456, 1605
EcoT38I	GRGCYC	1 cut(s)	1678
ErhI	CCWWGG	2 cut(s)	456, 1605
FalI	AAGNNNNNCTT	3 cut(s)	28, 572, 604
FaqI	GGGAC	5 cut(s)	475, 833, 842, 1199, 1909
Fnu4HI	GCNGC	4 cut(s)	179, 870, 873, 1824
FokI	GGATG	8 cut(s)	38, 461, 547, 702, 824, 954, 1076, 1580
FriOI	GRGCYC	1 cut(s)	1678
Fsp4HI	GCNGC	4 cut(s)	179, 870, 873, 1824
FspBI	CTAG	5 cut(s)	84, 263, 1092, 1278, 1473
FspI	TGCGCA	1 cut(s)	529
GlaI	GCGC	3 cut(s)	247, 529, 762
GluI	GCNGC	4 cut(s)	179, 870, 873, 1824
GsaI	CCCAGC	3 cut(s)	377, 579, 905
HaeII	RGCGCY	1 cut(s)	249
HaeIII	GGCC	6 cut(s)	295, 319, 584, 767, 916, 1626
HapII	CCGG	2 cut(s)	1695, 1791
HhaI	GCGC	3 cut(s)	248, 530, 763
Hin1I	GRCGYC	1 cut(s)	1188
Hin6I	GCGC	3 cut(s)	246, 528, 761
HinP1I	GCGC	3 cut(s)	246, 528, 761
HincII	GTYRAC	1 cut(s)	1210
HindII	GTYRAC	1 cut(s)	1210
HindIII	AAGCTT	2 cut(s)	1073, 1517
HinfI	GANTC	7 cut(s)	116, 257, 391, 476, 1256, 1403, 1591
HpaI	GTTAAC	1 cut(s)	1210
HpaII	CCGG	2 cut(s)	1695, 1791
HphI	GGTGA	4 cut(s)	445, 668, 686, 1545
Hpy166II	GTNNAC	4 cut(s)	345, 974, 1210, 1311
Hpy188I	TCNGA	8 cut(s)	139, 694, 1017, 1255, 1261, 1578, 1669, 1771
Hpy188III	TCNNGA	9 cut(s)	55, 480, 550, 1192, 1224, 1322, 1334, 1362, 1797
Hpy8I	GTNNAC	4 cut(s)	345, 974, 1210, 1311
HpyAV	CCTTC	6 cut(s)	330, 574, 595, 962, 1450, 1664
HpyCH4III	ACNGT	5 cut(s)	609, 685, 800, 1639, 1917
HpyCH4IV	ACGT	3 cut(s)	252, 852, 1188
HpyF10VI	GCNNNNNNNGC	5 cut(s)	428, 581, 758, 1623, 1688
HpyF3I	CTNAG	6 cut(s)	13, 174, 417, 922, 1014, 1738
HpySE526I	ACGT	3 cut(s)	252, 852, 1188
Hsp92I	GRCGYC	1 cut(s)	1188
HspAI	GCGC	3 cut(s)	246, 528, 761
KspAI	GTTAAC	1 cut(s)	1210
Kzo9I	GATC	8 cut(s)	510, 593, 772, 952, 1201, 1330, 1531, 1854
LmnI	GCTCC	5 cut(s)	887, 936, 1142, 1673, 1836
Lsp1109I	GCAGC	3 cut(s)	190, 856, 859
LweI	GCATC	4 cut(s)	365, 525, 1072, 1558
MaeI	CTAG	5 cut(s)	84, 263, 1092, 1278, 1473
MaeII	ACGT	3 cut(s)	252, 852, 1188
MaeIII	GTNAC	4 cut(s)	451, 853, 1475, 1801
MalI	GATC	8 cut(s)	512, 595, 774, 954, 1203, 1332, 1533, 1856
MbiI	CCGCTC	1 cut(s)	1839
MboI	GATC	8 cut(s)	510, 593, 772, 952, 1201, 1330, 1531, 1854
MboII	GAAGA	6 cut(s)	16, 485, 495, 671, 1239, 1433
MfeI	CAATTG	1 cut(s)	1299
MflI	RGATCY	3 cut(s)	772, 1330, 1531
MhlI	GDGCHC	1 cut(s)	1678
MlsI	TGGCCA	1 cut(s)	767
MluNI	TGGCCA	1 cut(s)	767
MlyI	GAGTC	2 cut(s)	110, 485
MmeI	TCCRAC	4 cut(s)	83, 107, 672, 1164
Mox20I	TGGCCA	1 cut(s)	767
MroXI	GAANNNNTTC	3 cut(s)	146, 341, 584
MscI	TGGCCA	1 cut(s)	767
MseI	TTAA	7 cut(s)	590, 1125, 1209, 1235, 1244, 1391, 1650
MslI	CAYNNNNRTG	3 cut(s)	195, 350, 554
Msp20I	TGGCCA	1 cut(s)	767
MspA1I	CMGCKG	1 cut(s)	373
MspCI	CTTAAG	1 cut(s)	589
MspI	CCGG	2 cut(s)	1695, 1791
MspR9I	CCNGG	9 cut(s)	243, 309, 741, 859, 938, 957, 1216, 1451, 1791
MunI	CAATTG	1 cut(s)	1299
MvaI	CCWGG	8 cut(s)	243, 309, 741, 859, 938, 957, 1216, 1451
MwoI	GCNNNNNNNGC	5 cut(s)	428, 581, 758, 1623, 1688
NciI	CCSGG	1 cut(s)	1791
NdeII	GATC	8 cut(s)	510, 593, 772, 952, 1201, 1330, 1531, 1854
NheI	GCTAGC	1 cut(s)	83
NlaIV	GGNNCC	4 cut(s)	240, 745, 1603, 1813
NmuCI	GTSAC	2 cut(s)	451, 1475
NsbI	TGCGCA	1 cut(s)	529
NspI	RCATGY	2 cut(s)	83, 1492
NspV	TTCGAA	1 cut(s)	1526
OliI	CACNNNNGTG	1 cut(s)	350
PaeR7I	CTCGAG	2 cut(s)	1360, 1795
PagI	TCATGA	1 cut(s)	549
PaqCI	CACCTGC	1 cut(s)	766
PasI	CCCWGGG	1 cut(s)	937
PceI	AGGCCT	1 cut(s)	584
PciI	ACATGT	1 cut(s)	1488
PdmI	GAANNNNTTC	3 cut(s)	146, 341, 584
PfeI	GAWTC	5 cut(s)	257, 391, 1256, 1403, 1591
PflMI	CCANNNNNTGG	2 cut(s)	102, 721
PfoI	TCCNGGA	1 cut(s)	739
PkrI	GCNGC	4 cut(s)	180, 871, 874, 1825
PleI	GAGTC	2 cut(s)	110, 484
PpsI	GAGTC	2 cut(s)	110, 484
PscI	ACATGT	1 cut(s)	1488
PshBI	ATTAAT	1 cut(s)	1125
Psp124BI	GAGCTC	1 cut(s)	1678
Psp6I	CCWGG	8 cut(s)	241, 307, 739, 857, 936, 955, 1214, 1449
PspFI	CCCAGC	3 cut(s)	373, 575, 901
PspGI	CCWGG	8 cut(s)	241, 307, 739, 857, 936, 955, 1214, 1449
PspN4I	GGNNCC	4 cut(s)	240, 745, 1603, 1813
PspPI	GGNCC	3 cut(s)	294, 971, 1308
PstI	CTGCAG	1 cut(s)	1810
PsuI	RGATCY	3 cut(s)	772, 1330, 1531
PvuII	CAGCTG	1 cut(s)	373
RsaI	GTAC	5 cut(s)	366, 415, 797, 1171, 1436
RsaNI	GTAC	5 cut(s)	365, 414, 796, 1170, 1435
RseI	CAYNNNNRTG	3 cut(s)	195, 350, 554
SacI	GAGCTC	1 cut(s)	1678
SaqAI	TTAA	7 cut(s)	590, 1125, 1209, 1235, 1244, 1391, 1650
SatI	GCNGC	4 cut(s)	179, 870, 873, 1824
Sau3AI	GATC	8 cut(s)	510, 593, 772, 952, 1201, 1330, 1531, 1854
Sau96I	GGNCC	3 cut(s)	294, 971, 1308
ScaI	AGTACT	2 cut(s)	415, 1171
SchI	GAGTC	2 cut(s)	110, 485
ScrFI	CCNGG	9 cut(s)	243, 309, 741, 859, 938, 957, 1216, 1451, 1791
SduI	GDGCHC	1 cut(s)	1678
SfaNI	GCATC	4 cut(s)	365, 525, 1072, 1558
SfcI	CTRYAG	2 cut(s)	1806, 1913
Sfr274I	CTCGAG	2 cut(s)	1360, 1795
SfuI	TTCGAA	1 cut(s)	1526
SinI	GGWCC	2 cut(s)	971, 1308
SlaI	CTCGAG	2 cut(s)	1360, 1795
SmiMI	CAYNNNNRTG	3 cut(s)	195, 350, 554
SmlI	CTYRAG	3 cut(s)	589, 1360, 1795
SmoI	CTYRAG	3 cut(s)	589, 1360, 1795
SpeI	ACTAGT	1 cut(s)	1091
SseBI	AGGCCT	1 cut(s)	584
SsiI	CCGC	2 cut(s)	1824, 1839
SspMI	CTAG	5 cut(s)	84, 263, 1092, 1278, 1473
SstI	GAGCTC	1 cut(s)	1678
StuI	AGGCCT	1 cut(s)	584
StyD4I	CCNGG	9 cut(s)	241, 307, 739, 857, 936, 955, 1214, 1449, 1789
StyI	CCWWGG	2 cut(s)	456, 1605
TaaI	ACNGT	5 cut(s)	609, 685, 800, 1639, 1917
TaiI	ACGT	3 cut(s)	255, 855, 1191
TaqI	TCGA	6 cut(s)	213, 279, 604, 1361, 1526, 1796
TatI	WGTACW	4 cut(s)	364, 413, 1169, 1434
TauI	GCSGC	1 cut(s)	1826
TfiI	GAWTC	5 cut(s)	257, 391, 1256, 1403, 1591
Tru1I	TTAA	7 cut(s)	590, 1125, 1209, 1235, 1244, 1391, 1650
Tru9I	TTAA	7 cut(s)	590, 1125, 1209, 1235, 1244, 1391, 1650
TscAI	CASTG	2 cut(s)	352, 1922
TseFI	GTSAC	2 cut(s)	451, 1475
TseI	GCWGC	3 cut(s)	178, 869, 872
Tsp45I	GTSAC	2 cut(s)	451, 1475
TspDTI	ATGAA	6 cut(s)	17, 383, 486, 538, 981, 1119
TspRI	CASTG	2 cut(s)	352, 1922
Van91I	CCANNNNNTGG	2 cut(s)	102, 721
Vha464I	CTTAAG	1 cut(s)	589
VpaK11BI	GGWCC	2 cut(s)	971, 1308
VspI	ATTAAT	1 cut(s)	1125
XagI	CCTNNNNNAGG	1 cut(s)	306
XapI	RAATTY	3 cut(s)	106, 877, 1642
XceI	RCATGY	2 cut(s)	83, 1492
XcmI	CCANNNNNNNNNTGG	2 cut(s)	99, 1603
XhoI	CTCGAG	2 cut(s)	1360, 1795
XmnI	GAANNNNTTC	3 cut(s)	146, 341, 584
XspI	CTAG	5 cut(s)	84, 263, 1092, 1278, 1473
ZraI	GACGTC	1 cut(s)	1189
ZrmI	AGTACT	2 cut(s)	415, 1171

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.