pycom16g14130
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0002513
Physical Location & Seq
Reverse (-)
10165497 .. 10166780
1284 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 915 bp
ATGATATCTTGCATTTCTCCAAATGCAGGATCATGCGAGCATACACTTAATACTTTGAGATATGCAGATCGGGTGAAAAGTCTTTCAAAGGGTGGCAATGCTAGAAAGGATCAAGCCGTAAATTCATTACCACCAGCTAATAAGGATGTTTCATCAGCATCCTCTACACTGGTTTCTGCTGAGGTTGAGAATGTCCGTGAGCAATATCAAGAAGTTAAAGTAGCTGATACAGGTAGAAGAGCCGTGGAGAAAGAAAGTGTCTCATATATCCCTCCTACTCCAGAGTTTGACAAGCAGCCTGCAAAGTCGTCATCAAGTAATCCCATCAATGTACGGGAAGAAAGTCGGATGGCTTCTGGTTCAATGGACAGGGAGAGATTTGAAATGAATAATTCTTACGGTGATAATTACAGTCAGAAGATGCCCTGTTATTCCCAAAACTCGTTTGATACAGAAGAGAAAGTACAAAAGGCATCACCACCTCGTAGGAAAGTAACCAAGGATGAAAAATCAGAAAGGTTGGGTAACTGGGTGAAAAAAGGTGGTTCGGATCTTTCCACTACAAGCTCTAAGCAGCAAAGTACAGGAACCTATAACGCAAGCAATGCTGGGTCCAGACAATCTGAGCCTGAACTTCCTGATGGGAATATCAATGCTATTCTCGTGGAAGAAGAGGCCCTAATTGCTGCCCATAGAAAAGAAATTGAGGATACAATGGAAATTGTTCGCGAAGAAATGAAACTGTTGGCAGAAGTGGACCAACCGGGCAGCCTCATAGACAACTACGTGACCCAGTTGAGCTTTGTTCTTTCCCGTAAGGCAGCCGGTCTGGTTAGCCTTCAAGCCCGCCTTGCAAGATTCCAGCATAGACTAAAAGAACAGGAAATACTAAGTCGGAAGAGAGTACCTCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000070 GO:0000226 GO:0000278 GO:0000280 GO:0000775 GO:0000776 GO:0000819 GO:0000902 GO:0000904 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005694 GO:0005737 GO:0005794 GO:0005795 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0005886 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007019 GO:0007049 GO:0007059 GO:0007080 GO:0007163 GO:0008017 GO:0008092 GO:0008150 GO:0008608 GO:0009505 GO:0009531 GO:0009653 GO:0009832 GO:0009834 GO:0009888 GO:0009987 GO:0010026 GO:0010087 GO:0010089 GO:0010090 GO:0012505 GO:0015630 GO:0015631 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022402 GO:0022411 GO:0030154 GO:0030312 GO:0030951 GO:0030952 GO:0031109 GO:0031984 GO:0032502 GO:0032984 GO:0032989 GO:0032991 GO:0035371 GO:0042546 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043624 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044427 GO:0044430 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048285 GO:0048468 GO:0048856 GO:0048869 GO:0050000 GO:0050789 GO:0050794 GO:0051010 GO:0051179 GO:0051234 GO:0051261 GO:0051276 GO:0051303 GO:0051310 GO:0051315 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0051983 GO:0065007 GO:0071554 GO:0071669 GO:0071840 GO:0071944 GO:0090058 GO:0090558 GO:0090626 GO:0097435 GO:0098687 GO:0098791 GO:0098813 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0140014 GO:1903047 GO:1903338 GO:1990752
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Kinesin RRM_1

Protein Analysis

305

Amino Acids

33.82

Weight (kDa)

8.29

Isoelectric Point (pI)

54.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 729
AciI CCGC 1 cut(s) 847
AclWI GGATC 3 cut(s) 37, 117, 558
AcsI RAATTY 1 cut(s) 121
AfaI GTAC 4 cut(s) 333, 465, 583, 906
AfiI CCNNNNNNNGG 1 cut(s) 26
AgsI TTSAA 4 cut(s) 87, 363, 383, 842
AluBI AGCT 4 cut(s) 137, 224, 567, 801
AluI AGCT 4 cut(s) 137, 224, 567, 801
Alw26I GTCTC 1 cut(s) 265
AlwI GGATC 3 cut(s) 37, 117, 558
AoxI GGCC 1 cut(s) 675
ApeKI GCWGC 5 cut(s) 295, 574, 686, 768, 821
ApoI RAATTY 1 cut(s) 121
Asp700I GAANNNNTTC 1 cut(s) 723
AspS9I GGNCC 3 cut(s) 612, 676, 757
AsuC2I CCSGG 1 cut(s) 765
AsuHPI GGTGA 4 cut(s) 85, 413, 468, 544
AvaII GGWCC 2 cut(s) 612, 757
BarI GAAGNNNNNNTAC 2 cut(s) 447, 479
BauI CACGAG 1 cut(s) 662
BbvCI CCTCAGC 1 cut(s) 180
BbvI GCAGC 5 cut(s) 307, 586, 673, 780, 833
BccI CCATC 3 cut(s) 332, 343, 635
BceAI ACGGC 2 cut(s) 101, 227
BciVI GTATCC 1 cut(s) 703
BcnI CCSGG 1 cut(s) 765
BcoDI GTCTC 1 cut(s) 265
BfaI CTAG 1 cut(s) 102
BfuI GTATCC 1 cut(s) 703
BisI GCNGC 5 cut(s) 296, 575, 687, 769, 822
BlsI GCNGC 5 cut(s) 297, 576, 688, 770, 823
Bme1390I CCNGG 1 cut(s) 765
Bme18I GGWCC 2 cut(s) 612, 757
BmgT120I GGNCC 3 cut(s) 612, 676, 757
BmiI GGNNCC 2 cut(s) 589, 613
BmrFI CCNGG 1 cut(s) 765
BmrI ACTGGG 2 cut(s) 538, 787
BmsI GCATC 3 cut(s) 167, 411, 482
BmuI ACTGGG 2 cut(s) 538, 787
BplI GAGNNNNNCTC 1 cut(s) 892
BpmI CTGGAG 1 cut(s) 264
Bpu10I CCTNAGC 1 cut(s) 180
BpuMI CCSGG 1 cut(s) 765
BsaAI YACGTR 1 cut(s) 787
BsaJI CCNNGG 2 cut(s) 243, 498
Bsc4I CCNNNNNNNGG 1 cut(s) 26
Bse118I RCCGGY 1 cut(s) 824
Bse1I ACTGG 3 cut(s) 174, 533, 793
Bse3DI GCAATG 2 cut(s) 103, 610
BseDI CCNNGG 2 cut(s) 243, 498
BseGI GGATG 4 cut(s) 151, 158, 354, 508
BseLI CCNNNNNNNGG 1 cut(s) 26
BseMI GCAATG 2 cut(s) 103, 610
BseMII CTCAG 2 cut(s) 171, 615
BseNI ACTGG 3 cut(s) 174, 533, 793
BseXI GCAGC 5 cut(s) 307, 586, 673, 780, 833
BseYI CCCAGC 1 cut(s) 608
Bsh1236I CGCG 1 cut(s) 729
BshFI GGCC 1 cut(s) 677
BsiSI CCGG 2 cut(s) 764, 825
BslI CCNNNNNNNGG 1 cut(s) 26
BsmAI GTCTC 1 cut(s) 265
BsnI GGCC 1 cut(s) 677
Bsp143I GATC 4 cut(s) 29, 67, 109, 550
Bsp68I TCGCGA 1 cut(s) 729
BspACI CCGC 1 cut(s) 847
BspANI GGCC 1 cut(s) 677
BspCNI CTCAG 2 cut(s) 172, 616
BspFNI CGCG 1 cut(s) 729
BspLI GGNNCC 2 cut(s) 589, 613
BspPI GGATC 3 cut(s) 37, 117, 558
BspQI GCTCTTC 1 cut(s) 232
BsrDI GCAATG 2 cut(s) 103, 610
BsrFI RCCGGY 1 cut(s) 824
BsrI ACTGG 3 cut(s) 174, 533, 793
BssAI RCCGGY 1 cut(s) 824
BssECI CCNNGG 2 cut(s) 243, 498
BssMI GATC 4 cut(s) 29, 67, 109, 550
BssSI CACGAG 1 cut(s) 662
BssT1I CCWWGG 1 cut(s) 498
Bst2BI CACGAG 1 cut(s) 662
Bst4CI ACNGT 3 cut(s) 401, 413, 744
Bst6I CTCTTC 4 cut(s) 232, 450, 666, 893
BstAPI GCANNNNNTGC 1 cut(s) 605
BstBAI YACGTR 1 cut(s) 787
BstC8I GCNNGC 4 cut(s) 38, 300, 601, 847
BstDEI CTNAG 4 cut(s) 180, 570, 624, 890
BstDSI CCRYGG 1 cut(s) 243
BstF5I GGATG 4 cut(s) 151, 158, 354, 508
BstFNI CGCG 1 cut(s) 729
BstKTI GATC 4 cut(s) 32, 70, 112, 553
BstMAI GTCTC 1 cut(s) 265
BstMBI GATC 4 cut(s) 29, 67, 109, 550
BstMWI GCNNNNNNNGC 3 cut(s) 605, 683, 851
BstSCI CCNGG 1 cut(s) 763
BstUI CGCG 1 cut(s) 729
BstV1I GCAGC 5 cut(s) 307, 586, 673, 780, 833
BstX2I RGATCY 1 cut(s) 550
BstYI RGATCY 1 cut(s) 550
BsuI GTATCC 1 cut(s) 703
BsuRI GGCC 1 cut(s) 677
BtgI CCRYGG 1 cut(s) 243
BtsCI GGATG 4 cut(s) 151, 158, 354, 508
BtsIMutI CAGTG 1 cut(s) 167
BtuMI TCGCGA 1 cut(s) 729
Cac8I GCNNGC 4 cut(s) 38, 300, 601, 847
Cfr10I RCCGGY 1 cut(s) 824
Cfr13I GGNCC 3 cut(s) 612, 676, 757
Csp6I GTAC 4 cut(s) 332, 464, 582, 905
CviAII CATG 1 cut(s) 33
CviQI GTAC 4 cut(s) 332, 464, 582, 905
DdeI CTNAG 4 cut(s) 180, 570, 624, 890
DpnI GATC 4 cut(s) 31, 69, 111, 552
DpnII GATC 4 cut(s) 29, 67, 109, 550
Eam1104I CTCTTC 4 cut(s) 232, 450, 666, 893
EarI CTCTTC 4 cut(s) 232, 450, 666, 893
Eco130I CCWWGG 1 cut(s) 498
Eco32I GATATC 1 cut(s) 6
Eco47I GGWCC 2 cut(s) 612, 757
EcoO109I RGGNCCY 1 cut(s) 676
EcoRV GATATC 1 cut(s) 6
EcoT14I CCWWGG 1 cut(s) 498
ErhI CCWWGG 1 cut(s) 498
FaeI CATG 1 cut(s) 36
FaiI YATR 9 cut(s) 34, 42, 63, 265, 267, 594, 693, 776, 867
FalI AAGNNNNNCTT 2 cut(s) 834, 866
FatI CATG 1 cut(s) 32
FauI CCCGC 1 cut(s) 854
Fnu4HI GCNGC 5 cut(s) 296, 575, 687, 769, 822
FokI GGATG 4 cut(s) 145, 158, 361, 515
Fsp4HI GCNGC 5 cut(s) 296, 575, 687, 769, 822
FspBI CTAG 1 cut(s) 102
GluI GCNGC 5 cut(s) 296, 575, 687, 769, 822
GsaI CCCAGC 1 cut(s) 612
GsuI CTGGAG 1 cut(s) 264
HaeIII GGCC 1 cut(s) 677
HapII CCGG 2 cut(s) 764, 825
Hin1II CATG 1 cut(s) 36
HinfI GANTC 1 cut(s) 858
HpaII CCGG 2 cut(s) 764, 825
HphI GGTGA 4 cut(s) 85, 413, 468, 544
Hpy166II GTNNAC 1 cut(s) 757
Hpy188I TCNGA 6 cut(s) 348, 417, 514, 550, 625, 897
Hpy188III TCNNGA 5 cut(s) 209, 281, 615, 638, 728
Hpy8I GTNNAC 1 cut(s) 757
HpyAV CCTTC 1 cut(s) 848
HpyCH4III ACNGT 3 cut(s) 401, 413, 744
HpyCH4IV ACGT 1 cut(s) 786
HpyCH4V TGCA 5 cut(s) 12, 26, 65, 302, 854
HpyF10VI GCNNNNNNNGC 3 cut(s) 605, 683, 851
HpyF3I CTNAG 4 cut(s) 180, 570, 624, 890
HpySE526I ACGT 1 cut(s) 786
Hsp92II CATG 1 cut(s) 36
Kzo9I GATC 4 cut(s) 29, 67, 109, 550
LguI GCTCTTC 1 cut(s) 232
Lsp1109I GCAGC 5 cut(s) 307, 586, 673, 780, 833
LweI GCATC 3 cut(s) 167, 411, 482
MaeI CTAG 1 cut(s) 102
MaeII ACGT 1 cut(s) 786
MaeIII GTNAC 3 cut(s) 493, 524, 787
MalI GATC 4 cut(s) 31, 69, 111, 552
MboI GATC 4 cut(s) 29, 67, 109, 550
MboII GAAGA 8 cut(s) 249, 350, 430, 467, 680, 683, 743, 910
MflI RGATCY 1 cut(s) 550
MluCI AATT 6 cut(s) 121, 391, 406, 681, 702, 720
MmeI TCCRAC 2 cut(s) 326, 875
MnlI CCTC 7 cut(s) 172, 175, 282, 492, 667, 700, 782
MroXI GAANNNNTTC 1 cut(s) 723
MseI TTAA 3 cut(s) 48, 216, 913
MspI CCGG 2 cut(s) 764, 825
MspR9I CCNGG 1 cut(s) 765
MvnI CGCG 1 cut(s) 729
MwoI GCNNNNNNNGC 3 cut(s) 605, 683, 851
NciI CCSGG 1 cut(s) 765
NdeII GATC 4 cut(s) 29, 67, 109, 550
NlaIII CATG 1 cut(s) 36
NlaIV GGNNCC 2 cut(s) 589, 613
NmuCI GTSAC 1 cut(s) 787
NruI TCGCGA 1 cut(s) 729
PciSI GCTCTTC 1 cut(s) 232
PdmI GAANNNNTTC 1 cut(s) 723
PfeI GAWTC 1 cut(s) 858
PkrI GCNGC 5 cut(s) 297, 576, 688, 770, 823
Ppu21I YACGTR 1 cut(s) 787
PspFI CCCAGC 1 cut(s) 608
PspN4I GGNNCC 2 cut(s) 589, 613
PspPI GGNCC 3 cut(s) 612, 676, 757
PsrI GAACNNNNNNTAC 2 cut(s) 870, 902
PsuI RGATCY 1 cut(s) 550
RruI TCGCGA 1 cut(s) 729
RsaI GTAC 4 cut(s) 333, 465, 583, 906
RsaNI GTAC 4 cut(s) 332, 464, 582, 905
SapI GCTCTTC 1 cut(s) 232
SaqAI TTAA 3 cut(s) 48, 216, 913
SatI GCNGC 5 cut(s) 296, 575, 687, 769, 822
Sau3AI GATC 4 cut(s) 29, 67, 109, 550
Sau96I GGNCC 3 cut(s) 612, 676, 757
ScrFI CCNGG 1 cut(s) 765
SfaNI GCATC 3 cut(s) 167, 411, 482
SinI GGWCC 2 cut(s) 612, 757
Sse9I AATT 6 cut(s) 121, 391, 406, 681, 702, 720
SsiI CCGC 1 cut(s) 847
SspMI CTAG 1 cut(s) 102
StyD4I CCNGG 1 cut(s) 763
StyI CCWWGG 1 cut(s) 498
TaaI ACNGT 3 cut(s) 401, 413, 744
TaiI ACGT 1 cut(s) 789
TasI AATT 6 cut(s) 121, 391, 406, 681, 702, 720
TatI WGTACW 2 cut(s) 463, 581
TfiI GAWTC 1 cut(s) 858
Tru1I TTAA 3 cut(s) 48, 216, 913
Tru9I TTAA 3 cut(s) 48, 216, 913
TscAI CASTG 1 cut(s) 174
TseFI GTSAC 1 cut(s) 787
TseI GCWGC 5 cut(s) 295, 574, 686, 768, 821
Tsp45I GTSAC 1 cut(s) 787
TspDTI ATGAA 5 cut(s) 114, 141, 401, 519, 752
TspGWI ACGGA 1 cut(s) 185
TspRI CASTG 1 cut(s) 174
VpaK11BI GGWCC 2 cut(s) 612, 757
XapI RAATTY 1 cut(s) 121
XmnI GAANNNNTTC 1 cut(s) 723
XspI CTAG 1 cut(s) 102
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.