Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0004094

Physical Location & Seq

Genomic Coordinates Reverse (-)

13978893 .. 13986294

Gene Structure 7402 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2535 bp

ATGGCTGGGATTTCTAGTGAAGAGTCTGGACCAGGAAGGTCTACGGAGGGGATTTCAAGTGGGCAGCGTTGTCTCTCTGGGGAAGCCTTAGCAGAATGGCGGTCCTCTGAGCAGGTGGAAAATGGAACCCCATCTACTTCGCCCCCTTATTGGGACTCTGACGACGATGACGATGGTGGGCCAAAGCCGTCAGAGTTATACGGAAAATATACGTGGAAGATAGAGAAGTTTTCTCAAATTAACAAAAGGGAACTTCGTAGTAATGCTTTTGAGGTTGGCGGCTACAAGTGGTATATCTTGATCGATCCCCAGGGTTGTGATGTTTGCAACCATCTCTCTTTGTTTCTTTGTGTAGCTCATCATGACAAACTTCTTCCAGGTTGGAGCCATTTTGCTCAGTTTACTATAGCTGTGGTAAATAAAGACCCTAAGAAGTCGAAATATTCTGATACATTACATCGCTTTTGGAAGAAAGAGCATGACTGGGGATGGAAAAAATTCATGGAGCTGTCAAAAGTATTAGATGGGTTTATTGATGCTGACACTCTTATAATAAAGGCGCAAGTCCAAGTCATCAGGGAGAAAGCAGACCGGCCCTTTCGCTGCCTTGATTGTCAATATAGGAGAGAACTTGTTAGGGTATACTTGACAAATGTAGAGCAAATTTGCCGTCGTTTTGTGGAAGAGAGAAGAAGTAAACTCGGAAAGTTGATAGAGGATAAAGCTAGATGGTCAAGCTTCTGCTCCTTCTGGGTGGGAATTGAACAAAATGTTAGGCGTCGTATGTCAAGGGAGAAGATGTATGCAGTCCTGAAAGTAGTTGTTAAGCACTTTTTTATTGAGAAAGAAGTCACATCTACGTTGGTAATGGACTCATTGTATAGTGGTTTAAAGGCTCTTGAAGGCCAAACTAAGTCGAAGAAAAGTAATGTGAAACTATTGGATACTGAAGAAGTGCGAGCGCCAATTGTTCGTGTAGAGAAAGATATGTTTGTATTGGTGGATGATGTTCTGATGCTACTTGAGAGGGCTGCCTTGGAACCATTACCTCCAAAAGATGAGAAGGGTCCTCAAAATCGTACAAAAGATGGAAATTCTGGAGAGGACTTCAACAAAGATTCTATTGAGCGGGATGAAAGGCGTCTTACGGAATTGGGTCGTAGGACTGTAGAAATATTTGTCCTTACTCATATTTTCAGCAGCAAAATTGAAGTTGCTTATCATGAATCTGTTGCATTGAAGAGGCAAGAGGAACTCATCCGTGAGGAAGAAGCAGCATGGCTGGCTGAAAGTGAGCAGAAGGCAAAGCGAGGAGCTACTGAAAAGGAAAAGAAGGCAAAGAAAAAACAGGCTAAACAGAAAAAGAACAACCGGAAGGGTAAGGACAAAGGGAGGGAGGAAAGACCCGATGTAGTAGCACAAGAGAAACAAGAACACCCTACTGAAGAAATGAAAGACTACACACGGGATGAAGAACAACCTGTACTTGAAAAGCCAGATACGCTGGAAGATGTATCTGATGTGTCTGATTCAGTGGATGGTGTTGCTGAAGTACCTCCGCTTGATTCTGAAGACAGAGATGCTGGTCCAATAAATTGGGATACCGACGCATCAGAAGTCCATCATCTCACAGAAGCTAGTAGCAGTGGTATTACTGTACTGTCATCCTTGCAAAACGGAGTATCTGAAAGAAAGAGTCAATCTGTGATGGACGATAGTTCCTCAACATGTTCTACAGATTCTGTCCCATCAGTGGTAATGAATGGGTCATATAAGGGGAACTCATTATCTAGCTGCAACAACCAGAAATCTCCTAGCAGGGGGAAACACCAACGCACCAAGGCAACAAGTGACAGGAACAGTTGGCCAAACGGGACAGAAAGTCAGCCTTCTGGGCCTGTAGCGGATGCAGGATATCAGAATGATGCTTCTGGAAGTAGTAGTAAGGCTGGTGAATCGGAGTCAGAGCCTGCTGTTCACTCATTGCAGGATCGGATTAAATGGCCGGAGCAGCATGTCGTTAAGAAGGAGGAAGAAGTTGCATCTCTGCAGAAAAAATTGACTATCAATGATGGGGTTGATTTAGAAAGACCTTTGAAAGACAAGACACCAGCAGTAACATCCTCTCCTGGAAGCCCTTCTAAAGATGTGCCCCTGAATGGTCCACCGAAGTCAGATAGCCAGAGTAGTGCTGTTGTAGAATCTATTCCACTTAGAAAAGGATCCTCAAGTGGTGCACAACAGACTCTGAGAGTGGTACCTTTGACTACTTCACCGCAGAATAATGGCATGTCCAAACCTCAGACTCAGAAGCCTACTACTCCAAAACCAGCTGAAAAAGCCATGGCACAGCAAATGCCTGTGATGTCTAGGCCTTCCAGTGCTCCTCTTGTTCCTGGTCCGAGGCCTACTTCTACTGTTGTGCCTATAGTTCAAGCTCAAACTGCTCCTCAGCTTGCCCGTTCAGTAAGTGCAGCTGGCTGGTTGGGGCTTCTCTGCACACATCATGATCGATCCATCGCCAGCAACTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006914 GO:0006950 GO:0006952 GO:0006955 GO:0006996 GO:0007033 GO:0008150 GO:0008152 GO:0009056 GO:0009987 GO:0016020 GO:0016043 GO:0016236 GO:0044237 GO:0044248 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0050896 GO:0061919 GO:0071840 GO:0071944 GO:1905037

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MATH

Protein Analysis

845

Amino Acids

94.08

Weight (kDa)

6.67

Isoelectric Point (pI)

55.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MATH_2	PF22486	69 - 189	1.1e-31	MATH domain
MATH	PF00917	74 - 191	7.4e-21	MATH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004094)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04300 AT1G04300 AT1G04300 AT1G04300 AT1G04300 AT1G04300 AT5G43560 AT5G43560 AT5G52330 AT5G52330 AT5G52330 AT5G52330
fragaria_vesca	FvH4_4g02970 FvH4_4g02970
malus_domestica	MD13G1209100.v1.1 MD16G1211000.v1.1
prunus_persica	Prupe.1G033200_v2.0.a1 Prupe.1G033200_v2.0.a1
pyrus_communis	pycom13g18110 pycom13g18140 pycom16g17710
rosa_chinensis	RchiOBHm_Chr4g0391041
rosa_laevigata	RLG00000009900
rosa_multiflora	Rmu_sc0001824.1_g000032
rosa_roxburghii	Rroxscaffold_5G00336880
rosa_rugosa	Rorug03G0333900 Rorug03G0333900 Rorug03G0334000
rosa_samantha	Rh4AG034400 Rh4BG029300 Rh4CG038100 Rh4DG031700
rosa_wichuraiana	Rw4G002680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	551
AarI	CACCTGC	1 cut(s)	103
Acc36I	ACCTGC	1 cut(s)	103
Acc65I	GGTACC	1 cut(s)	2257
AccB1I	GGYRCC	1 cut(s)	2257
AccBSI	CCGCTC	1 cut(s)	1129
AccI	GTMKAC	2 cut(s)	41, 642
AciI	CCGC	6 cut(s)	100, 279, 1129, 1559, 1904, 2276
AclWI	GGATC	5 cut(s)	299, 1998, 2217, 2230, 2508
AcoI	YGGCCR	2 cut(s)	1865, 2003
AcsI	RAATTY	3 cut(s)	497, 663, 1093
AcuI	CTGAAG	4 cut(s)	969, 1464, 1569, 1590
AcyI	GRCGYC	2 cut(s)	778, 1141
AfaI	GTAC	5 cut(s)	1081, 1485, 1554, 1659, 2259
AfiI	CCNNNNNNNGG	5 cut(s)	150, 151, 1753, 1820, 2159
AflIII	ACRYGT	1 cut(s)	1727
AgsI	TTSAA	9 cut(s)	57, 764, 902, 1111, 1211, 1240, 1490, 2098, 2435
AhdI	GACNNNNNGTC	1 cut(s)	1881
AjnI	CCWGG	5 cut(s)	31, 309, 376, 2128, 2395
Alw21I	GWGCWC	2 cut(s)	2239, 2386
Alw26I	GTCTC	1 cut(s)	77
Alw44I	GTGCAC	1 cut(s)	2235
AlwI	GGATC	5 cut(s)	299, 1998, 2217, 2230, 2508
AlwNI	CAGNNNCTG	3 cut(s)	1742, 1970, 2248
AoxI	GGCC	8 cut(s)	179, 593, 904, 1865, 1895, 2003, 2372, 2405
ApaLI	GTGCAC	1 cut(s)	2235
ApeKI	GCWGC	8 cut(s)	64, 603, 1031, 1200, 1274, 1794, 2011, 2474
ApoI	RAATTY	3 cut(s)	497, 663, 1093
ArsI	GACNNNNNNTTYG	2 cut(s)	655, 687
Asp700I	GAANNNNTTC	3 cut(s)	497, 2137, 2205
Asp718I	GGTACC	1 cut(s)	2257
AspLEI	GCGC	2 cut(s)	562, 964
AspS9I	GGNCC	9 cut(s)	29, 102, 179, 594, 1067, 1586, 1895, 2162, 2399
AsuHPI	GGTGA	2 cut(s)	1964, 2265
AvaII	GGWCC	6 cut(s)	29, 102, 1067, 1586, 2162, 2399
BaeGI	GKGCMC	2 cut(s)	2154, 2239
BalI	TGGCCA	1 cut(s)	1867
BamHI	GGATCC	1 cut(s)	2222
BanI	GGYRCC	1 cut(s)	2257
BbsI	GAAGAC	1 cut(s)	1578
Bbv12I	GWGCWC	2 cut(s)	2239, 2386
BbvCI	CCTCAGC	1 cut(s)	2451
BbvI	GCAGC	8 cut(s)	76, 590, 1018, 1212, 1286, 1781, 2023, 2486
BceAI	ACGGC	2 cut(s)	172, 654
BciT130I	CCWGG	5 cut(s)	33, 311, 378, 2130, 2397
BciVI	GTATCC	2 cut(s)	937, 1594
BcoDI	GTCTC	1 cut(s)	77
BfaI	CTAG	6 cut(s)	15, 726, 1638, 1791, 1815, 2370
BfmI	CTRYAG	6 cut(s)	405, 1167, 1734, 1899, 2048, 2427
BfoI	RGCGCY	1 cut(s)	965
BfuAI	ACCTGC	1 cut(s)	103
BfuI	GTATCC	2 cut(s)	937, 1594
BglI	GCCNNNNNGGC	1 cut(s)	1894
BisI	GCNGC	9 cut(s)	65, 280, 604, 1032, 1201, 1275, 1795, 2012, 2475
BlsI	GCNGC	9 cut(s)	66, 281, 605, 1033, 1202, 1276, 1796, 2013, 2476
Bme1390I	CCNGG	5 cut(s)	33, 311, 378, 2130, 2397
Bme18I	GGWCC	6 cut(s)	29, 102, 1067, 1586, 2162, 2399
BmeRI	GACNNNNNGTC	1 cut(s)	1881
BmgT120I	GGNCC	9 cut(s)	29, 102, 179, 594, 1067, 1586, 1895, 2162, 2399
BmiI	GGNNCC	6 cut(s)	127, 386, 1041, 1068, 2224, 2259
BmrFI	CCNGG	5 cut(s)	33, 311, 378, 2130, 2397
BmrI	ACTGGG	1 cut(s)	493
BmsI	GCATC	7 cut(s)	526, 1005, 1570, 1619, 1897, 1915, 2051
BmuI	ACTGGG	1 cut(s)	493
BpiI	GAAGAC	1 cut(s)	1578
BpmI	CTGGAG	1 cut(s)	1119
Bpu10I	CCTNAGC	2 cut(s)	88, 2451
BpuEI	CTTGAG	2 cut(s)	1043, 2212
Bsa29I	ATCGAT	2 cut(s)	303, 2512
BsaAI	YACGTR	1 cut(s)	213
BsaHI	GRCGYC	2 cut(s)	778, 1141
BsaJI	CCNNGG	6 cut(s)	309, 310, 1035, 1839, 2343, 2402
BsaWI	WCCGGW	1 cut(s)	1371
BsaXI	ACNNNNNCTCC	4 cut(s)	785, 815, 2110, 2140
Bsc4I	CCNNNNNNNGG	5 cut(s)	150, 151, 1753, 1820, 2159
Bse118I	RCCGGY	1 cut(s)	591
Bse1I	ACTGG	2 cut(s)	488, 2379
Bse3DI	GCAATG	1 cut(s)	1982
BseBI	CCWGG	5 cut(s)	33, 311, 378, 2130, 2397
BseCI	ATCGAT	2 cut(s)	303, 2512
BseDI	CCNNGG	6 cut(s)	309, 310, 1035, 1839, 2343, 2402
BseGI	GGATG	9 cut(s)	494, 1009, 1138, 1257, 1474, 1543, 1664, 1912, 2120
BseLI	CCNNNNNNNGG	5 cut(s)	150, 151, 1753, 1820, 2159
BseMI	GCAATG	1 cut(s)	1982
BseMII	CTCAG	6 cut(s)	99, 410, 2240, 2315, 2321, 2465
BseNI	ACTGG	2 cut(s)	488, 2379
BseRI	GAGGAG	3 cut(s)	1326, 2376, 2439
BseSI	GKGCMC	2 cut(s)	2154, 2239
BseXI	GCAGC	8 cut(s)	76, 590, 1018, 1212, 1286, 1781, 2023, 2486
BseYI	CCCAGC	1 cut(s)	5
BsgI	GTGCAG	2 cut(s)	2482, 2493
BshFI	GGCC	8 cut(s)	181, 595, 906, 1867, 1897, 2005, 2374, 2407
BshNI	GGYRCC	1 cut(s)	2257
BshVI	ATCGAT	2 cut(s)	303, 2512
BsiHKAI	GWGCWC	2 cut(s)	2239, 2386
BsiSI	CCGG	3 cut(s)	592, 1372, 2006
BslFI	GGGAC	3 cut(s)	167, 1730, 1888
BslI	CCNNNNNNNGG	5 cut(s)	150, 151, 1753, 1820, 2159
BsmAI	GTCTC	1 cut(s)	77
BsmFI	GGGAC	3 cut(s)	167, 1730, 1888
BsnI	GGCC	8 cut(s)	181, 595, 906, 1867, 1897, 2005, 2374, 2407
Bsp1286I	GDGCHC	3 cut(s)	2154, 2239, 2386
Bsp143I	GATC	6 cut(s)	300, 304, 1990, 2222, 2509, 2513
Bsp19I	CCATGG	1 cut(s)	2343
BspACI	CCGC	6 cut(s)	100, 279, 1129, 1559, 1904, 2276
BspANI	GGCC	8 cut(s)	181, 595, 906, 1867, 1897, 2005, 2374, 2407
BspCNI	CTCAG	6 cut(s)	100, 409, 2241, 2314, 2320, 2464
BspDI	ATCGAT	2 cut(s)	303, 2512
BspHI	TCATGA	3 cut(s)	361, 1222, 2506
BspLI	GGNNCC	6 cut(s)	127, 386, 1041, 1068, 2224, 2259
BspMAI	CTGCAG	1 cut(s)	2052
BspMI	ACCTGC	1 cut(s)	103
BspPI	GGATC	5 cut(s)	299, 1998, 2217, 2230, 2508
BspT107I	GGYRCC	1 cut(s)	2257
BsrBI	CCGCTC	1 cut(s)	1129
BsrDI	GCAATG	1 cut(s)	1982
BsrFI	RCCGGY	1 cut(s)	591
BsrI	ACTGG	2 cut(s)	488, 2379
BssAI	RCCGGY	1 cut(s)	591
BssECI	CCNNGG	6 cut(s)	309, 310, 1035, 1839, 2343, 2402
BssMI	GATC	6 cut(s)	300, 304, 1990, 2222, 2509, 2513
BssNAI	GTATAC	1 cut(s)	643
BssNI	GRCGYC	2 cut(s)	778, 1141
BssT1I	CCWWGG	3 cut(s)	1035, 1839, 2343
Bst1107I	GTATAC	1 cut(s)	643
Bst2UI	CCWGG	5 cut(s)	33, 311, 378, 2130, 2397
Bst4CI	ACNGT	5 cut(s)	1168, 1657, 1662, 1862, 2419
Bst6I	CTCTTC	3 cut(s)	15, 678, 1235
BstACI	GRCGYC	2 cut(s)	778, 1141
BstBAI	YACGTR	1 cut(s)	213
BstC8I	GCNNGC	6 cut(s)	960, 1284, 1971, 2457, 2479, 2524
BstDSI	CCRYGG	1 cut(s)	2343
BstF5I	GGATG	9 cut(s)	494, 1009, 1138, 1257, 1474, 1543, 1664, 1912, 2120
BstH2I	RGCGCY	1 cut(s)	965
BstHHI	GCGC	2 cut(s)	562, 964
BstKTI	GATC	6 cut(s)	303, 307, 1993, 2225, 2512, 2516
BstMAI	GTCTC	1 cut(s)	77
BstMBI	GATC	6 cut(s)	300, 304, 1990, 2222, 2509, 2513
BstMWI	GCNNNNNNNGC	6 cut(s)	1283, 1501, 1894, 2011, 2339, 2444
BstNI	CCWGG	5 cut(s)	33, 311, 378, 2130, 2397
BstNSI	RCATGY	3 cut(s)	1731, 2018, 2293
BstSCI	CCNGG	5 cut(s)	31, 309, 376, 2128, 2395
BstSFI	CTRYAG	6 cut(s)	405, 1167, 1734, 1899, 2048, 2427
BstSLI	GKGCMC	2 cut(s)	2154, 2239
BstV1I	GCAGC	8 cut(s)	76, 590, 1018, 1212, 1286, 1781, 2023, 2486
BstV2I	GAAGAC	1 cut(s)	1578
BstX2I	RGATCY	1 cut(s)	2222
BstXI	CCANNNNNNTGG	1 cut(s)	1596
BstYI	RGATCY	1 cut(s)	2222
BstZ17I	GTATAC	1 cut(s)	643
Bsu15I	ATCGAT	2 cut(s)	303, 2512
BsuI	GTATCC	2 cut(s)	937, 1594
BsuRI	GGCC	8 cut(s)	181, 595, 906, 1867, 1897, 2005, 2374, 2407
BsuTUI	ATCGAT	2 cut(s)	303, 2512
BtgI	CCRYGG	1 cut(s)	2343
BtgZI	GCGATG	2 cut(s)	443, 2503
BtsCI	GGATG	9 cut(s)	494, 1009, 1138, 1257, 1474, 1543, 1664, 1912, 2120
BtsI	GCAGTG	1 cut(s)	1651
BtsIMutI	CAGTG	4 cut(s)	1539, 1651, 1758, 2386
BveI	ACCTGC	1 cut(s)	103
Cac8I	GCNNGC	6 cut(s)	960, 1284, 1971, 2457, 2479, 2524
CaiI	CAGNNNCTG	3 cut(s)	1742, 1970, 2248
CciI	TCATGA	3 cut(s)	361, 1222, 2506
CfoI	GCGC	2 cut(s)	562, 964
Cfr10I	RCCGGY	1 cut(s)	591
Cfr13I	GGNCC	9 cut(s)	29, 102, 179, 594, 1067, 1586, 1895, 2162, 2399
ClaI	ATCGAT	2 cut(s)	303, 2512
CseI	GACGC	3 cut(s)	767, 1130, 1616
Csp6I	GTAC	5 cut(s)	1080, 1484, 1553, 1658, 2258
CviQI	GTAC	5 cut(s)	1080, 1484, 1553, 1658, 2258
DpnI	GATC	6 cut(s)	302, 306, 1992, 2224, 2511, 2515
DpnII	GATC	6 cut(s)	300, 304, 1990, 2222, 2509, 2513
DraI	TTTAAA	1 cut(s)	891
DriI	GACNNNNNGTC	1 cut(s)	1881
EaeI	YGGCCR	2 cut(s)	1865, 2003
Eam1104I	CTCTTC	3 cut(s)	15, 678, 1235
Eam1105I	GACNNNNNGTC	1 cut(s)	1881
EarI	CTCTTC	3 cut(s)	15, 678, 1235
Eco130I	CCWWGG	3 cut(s)	1035, 1839, 2343
Eco147I	AGGCCT	2 cut(s)	2374, 2407
Eco32I	GATATC	1 cut(s)	1916
Eco47I	GGWCC	6 cut(s)	29, 102, 1067, 1586, 2162, 2399
Eco57I	CTGAAG	4 cut(s)	969, 1464, 1569, 1590
EcoO109I	RGGNCCY	1 cut(s)	1067
EcoRII	CCWGG	5 cut(s)	31, 309, 376, 2128, 2395
EcoRV	GATATC	1 cut(s)	1916
EcoT14I	CCWWGG	3 cut(s)	1035, 1839, 2343
ErhI	CCWWGG	3 cut(s)	1035, 1839, 2343
FalI	AAGNNNNNCTT	2 cut(s)	1873, 1905
FaqI	GGGAC	3 cut(s)	167, 1730, 1888
FauI	CCCGC	1 cut(s)	1122
FblI	GTMKAC	2 cut(s)	41, 642
Fnu4HI	GCNGC	9 cut(s)	65, 280, 604, 1032, 1201, 1275, 1795, 2012, 2475
FokI	GGATG	9 cut(s)	501, 1016, 1145, 1244, 1481, 1550, 1651, 1919, 2107
Fsp4HI	GCNGC	9 cut(s)	65, 280, 604, 1032, 1201, 1275, 1795, 2012, 2475
FspBI	CTAG	6 cut(s)	15, 726, 1638, 1791, 1815, 2370
GlaI	GCGC	2 cut(s)	561, 963
GluI	GCNGC	9 cut(s)	65, 280, 604, 1032, 1201, 1275, 1795, 2012, 2475
GsaI	CCCAGC	1 cut(s)	9
GsuI	CTGGAG	1 cut(s)	1119
HaeII	RGCGCY	1 cut(s)	965
HaeIII	GGCC	8 cut(s)	181, 595, 906, 1867, 1897, 2005, 2374, 2407
HapII	CCGG	3 cut(s)	592, 1372, 2006
HgaI	GACGC	3 cut(s)	767, 1130, 1616
HhaI	GCGC	2 cut(s)	562, 964
Hin1I	GRCGYC	2 cut(s)	778, 1141
Hin6I	GCGC	2 cut(s)	560, 962
HinP1I	GCGC	2 cut(s)	560, 962
HindIII	AAGCTT	1 cut(s)	736
HpaII	CCGG	3 cut(s)	592, 1372, 2006
HphI	GGTGA	2 cut(s)	1964, 2265
Hpy166II	GTNNAC	7 cut(s)	42, 402, 643, 698, 1978, 2165, 2237
Hpy188III	TCNNGA	9 cut(s)	27, 298, 362, 811, 899, 1098, 1223, 1932, 2507
Hpy8I	GTNNAC	7 cut(s)	42, 402, 643, 698, 1978, 2165, 2237
Hpy99I	CGWCG	4 cut(s)	167, 675, 783, 1610
HpyCH4III	ACNGT	5 cut(s)	1168, 1657, 1662, 1862, 2419
HpyCH4IV	ACGT	2 cut(s)	212, 860
HpyF10VI	GCNNNNNNNGC	6 cut(s)	1283, 1501, 1894, 2011, 2339, 2444
HpySE526I	ACGT	2 cut(s)	212, 860
Hsp92I	GRCGYC	2 cut(s)	778, 1141
HspAI	GCGC	2 cut(s)	560, 962
KpnI	GGTACC	1 cut(s)	2261
Kzo9I	GATC	6 cut(s)	300, 304, 1990, 2222, 2509, 2513
LmnI	GCTCC	7 cut(s)	384, 505, 749, 1313, 2008, 2389, 2452
Lsp1109I	GCAGC	8 cut(s)	76, 590, 1018, 1212, 1286, 1781, 2023, 2486
LweI	GCATC	7 cut(s)	526, 1005, 1570, 1619, 1897, 1915, 2051
MaeI	CTAG	6 cut(s)	15, 726, 1638, 1791, 1815, 2370
MaeII	ACGT	2 cut(s)	212, 860
MaeIII	GTNAC	3 cut(s)	850, 1850, 2116
MalI	GATC	6 cut(s)	302, 306, 1992, 2224, 2511, 2515
MbiI	CCGCTC	1 cut(s)	1129
MboI	GATC	6 cut(s)	300, 304, 1990, 2222, 2509, 2513
MfeI	CAATTG	1 cut(s)	966
MflI	RGATCY	1 cut(s)	2222
MhlI	GDGCHC	3 cut(s)	2154, 2239, 2386
MlsI	TGGCCA	1 cut(s)	1867
MluNI	TGGCCA	1 cut(s)	1867
MlyI	GAGTC	7 cut(s)	32, 149, 866, 1705, 1970, 2239, 2299
MmeI	TCCRAC	1 cut(s)	362
Mox20I	TGGCCA	1 cut(s)	1867
MroXI	GAANNNNTTC	3 cut(s)	497, 2137, 2205
MscI	TGGCCA	1 cut(s)	1867
MseI	TTAA	5 cut(s)	240, 825, 890, 1998, 2022
Msp20I	TGGCCA	1 cut(s)	1867
MspA1I	CMGCKG	2 cut(s)	2333, 2477
MspI	CCGG	3 cut(s)	592, 1372, 2006
MspR9I	CCNGG	5 cut(s)	33, 311, 378, 2130, 2397
MunI	CAATTG	1 cut(s)	966
MvaI	CCWGG	5 cut(s)	33, 311, 378, 2130, 2397
MwoI	GCNNNNNNNGC	6 cut(s)	1283, 1501, 1894, 2011, 2339, 2444
NcoI	CCATGG	1 cut(s)	2343
NdeII	GATC	6 cut(s)	300, 304, 1990, 2222, 2509, 2513
NlaIV	GGNNCC	6 cut(s)	127, 386, 1041, 1068, 2224, 2259
NmuCI	GTSAC	2 cut(s)	850, 1850
NspI	RCATGY	3 cut(s)	1731, 2018, 2293
PagI	TCATGA	3 cut(s)	361, 1222, 2506
PaqCI	CACCTGC	1 cut(s)	103
PasI	CCCWGGG	1 cut(s)	310
PceI	AGGCCT	2 cut(s)	2374, 2407
PciI	ACATGT	1 cut(s)	1727
PcsI	WCGNNNNNNNCGW	1 cut(s)	168
PdmI	GAANNNNTTC	3 cut(s)	497, 2137, 2205
PfeI	GAWTC	7 cut(s)	1118, 1226, 1529, 1565, 1739, 1955, 2201
PfoI	TCCNGGA	1 cut(s)	2128
PkrI	GCNGC	9 cut(s)	66, 281, 605, 1033, 1202, 1276, 1796, 2013, 2476
PleI	GAGTC	7 cut(s)	31, 149, 866, 1704, 1969, 2239, 2299
PpsI	GAGTC	7 cut(s)	31, 149, 866, 1704, 1969, 2239, 2299
Ppu21I	YACGTR	1 cut(s)	213
PpuMI	RGGWCCY	1 cut(s)	1067
PscI	ACATGT	1 cut(s)	1727
PsiI	TTATAA	1 cut(s)	551
Psp5II	RGGWCCY	1 cut(s)	1067
Psp6I	CCWGG	5 cut(s)	31, 309, 376, 2128, 2395
PspFI	CCCAGC	1 cut(s)	5
PspGI	CCWGG	5 cut(s)	31, 309, 376, 2128, 2395
PspN4I	GGNNCC	6 cut(s)	127, 386, 1041, 1068, 2224, 2259
PspPI	GGNCC	9 cut(s)	29, 102, 179, 594, 1067, 1586, 1895, 2162, 2399
PspPPI	RGGWCCY	1 cut(s)	1067
PsrI	GAACNNNNNNTAC	4 cut(s)	118, 150, 1467, 1499
PstI	CTGCAG	1 cut(s)	2052
PstNI	CAGNNNCTG	3 cut(s)	1742, 1970, 2248
PsuI	RGATCY	1 cut(s)	2222
PvuII	CAGCTG	2 cut(s)	2333, 2477
RsaI	GTAC	5 cut(s)	1081, 1485, 1554, 1659, 2259
RsaNI	GTAC	5 cut(s)	1080, 1484, 1553, 1658, 2258
SaqAI	TTAA	5 cut(s)	240, 825, 890, 1998, 2022
SatI	GCNGC	9 cut(s)	65, 280, 604, 1032, 1201, 1275, 1795, 2012, 2475
Sau3AI	GATC	6 cut(s)	300, 304, 1990, 2222, 2509, 2513
Sau96I	GGNCC	9 cut(s)	29, 102, 179, 594, 1067, 1586, 1895, 2162, 2399
SchI	GAGTC	7 cut(s)	32, 149, 866, 1705, 1970, 2239, 2299
ScrFI	CCNGG	5 cut(s)	33, 311, 378, 2130, 2397
SduI	GDGCHC	3 cut(s)	2154, 2239, 2386
SfaNI	GCATC	7 cut(s)	526, 1005, 1570, 1619, 1897, 1915, 2051
SfcI	CTRYAG	6 cut(s)	405, 1167, 1734, 1899, 2048, 2427
SinI	GGWCC	6 cut(s)	29, 102, 1067, 1586, 2162, 2399
SmlI	CTYRAG	2 cut(s)	1022, 2227
SmoI	CTYRAG	2 cut(s)	1022, 2227
SseBI	AGGCCT	2 cut(s)	2374, 2407
SsiI	CCGC	6 cut(s)	100, 279, 1129, 1559, 1904, 2276
SspI	AATATT	2 cut(s)	443, 1176
SspMI	CTAG	6 cut(s)	15, 726, 1638, 1791, 1815, 2370
StuI	AGGCCT	2 cut(s)	2374, 2407
StyD4I	CCNGG	5 cut(s)	31, 309, 376, 2128, 2395
StyI	CCWWGG	3 cut(s)	1035, 1839, 2343
TaaI	ACNGT	5 cut(s)	1168, 1657, 1662, 1862, 2419
TaiI	ACGT	2 cut(s)	215, 863
TaqI	TCGA	4 cut(s)	303, 437, 917, 2512
TatI	WGTACW	2 cut(s)	1483, 1657
TauI	GCSGC	1 cut(s)	282
TfiI	GAWTC	7 cut(s)	1118, 1226, 1529, 1565, 1739, 1955, 2201
Tru1I	TTAA	5 cut(s)	240, 825, 890, 1998, 2022
Tru9I	TTAA	5 cut(s)	240, 825, 890, 1998, 2022
TscAI	CASTG	4 cut(s)	1539, 1651, 1758, 2386
TseFI	GTSAC	2 cut(s)	850, 1850
TseI	GCWGC	8 cut(s)	64, 603, 1031, 1200, 1274, 1794, 2011, 2474
Tsp45I	GTSAC	2 cut(s)	850, 1850
TspDTI	ATGAA	6 cut(s)	490, 1149, 1239, 1466, 1485, 1775
TspGWI	ACGGA	5 cut(s)	59, 216, 1163, 1250, 1692
TspRI	CASTG	4 cut(s)	1539, 1651, 1758, 2386
VneI	GTGCAC	1 cut(s)	2235
VpaK11BI	GGWCC	6 cut(s)	29, 102, 1067, 1586, 2162, 2399
XapI	RAATTY	3 cut(s)	497, 663, 1093
XceI	RCATGY	3 cut(s)	1731, 2018, 2293
XmiI	GTMKAC	2 cut(s)	41, 642
XmnI	GAANNNNTTC	3 cut(s)	497, 2137, 2205
XspI	CTAG	6 cut(s)	15, 726, 1638, 1791, 1815, 2370

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.