Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0008407

Physical Location & Seq

Genomic Coordinates Forward (+)

15944512 .. 15950676

Gene Structure 6165 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom16g19050.8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1629 bp

ATGGCCGCCATGGAAGGCGTTCTCCAGAACCAACCTCCTCAGCCCCAACAACCGCCGCAACCCATGGCGGTGGAGAGACTAAACGACGCCGTGCAGCAGCAGCTGAATCTCGAGGCCGTCAAGACCCGAGCCATCAGCCTCTTCAAAGCCATCTCCCGCATTCTCGAAGACCTCAACGCCTACGCTTACGCCAACACCACGCCCAAATGGCAAGACATCCTGAGCCAGTACTCCATGGTCAACCTCGAGCTCTTCAATATCGTCGACGAAATCAAAAAGGTCTCCAAGGCCTTCGTGGTGCACCCCAAGAACGTCAACGCCGAAAACGCCACGGTGTTGCCAGTGATGTTGTCGTCAAAGCTGTTGCCGGAGATGGAGGTTGAAGACAATGGAAAGAGGGAGCAATTGCTTCATGGGTTGCAGAACCTCCCACTTTCTTCCCAAATTGACAAGCTTAAGGCGAGGATTGATATGATTGGAGCTGCTTGTGAAAGTGCAGAGAAAGTGTTGGCTGATACACGAAAAGCTTACTGTTTTGGAACCCGTCAAGGCATTCCGATTGTTCCTACTCTGGACAAGGCGCAGGCTGCCAAAATTCAAGAGCAAGAGAATCTTCTCCGAACTGCAGTTAACTTTGGCGAAGGTTTACGGTTACCTGGAGATCAAAGACAGAATGCACCTACACTTCCAATGCATCTGGTAGATGTACTCAGTGCAGGTGATGGAGTGCAAACTTTCCCTGAAGCATCGGGGATGTACTCAAAGAATACCCCTGTATCATCAAGTAACTTGGCTGGTCAGAGCCCTCTAATGCAGGTTTCTGGATCACAAATTATGGGAAGGCCAGCTGCATCTCCTGGTGGTGCAAGTGTTTCAAACTTTGATAACACAACTACATCTCCGCTGCCATATGCCAACTCACCAAGGTCTGGTACAACTATGATGAATACCCCATCTCCTCAACAACAAAGCCAGCAACAGAAGCAACAACAACAGCAGCCACAGCAGCAGAAGTTGATGCAATTACCTCAGCATCAGCAACTCCTGGCTCAGCAACAATTTAGGCACAATGCAATGCAAGGAATAGGACAATTACATGGACAGCATCAAGTGCAATTCTCTCAGCCACTGGGGCACCAGCAATTTCAAGGTCGGCAGTTGCCCTCTGGACATGTACAACATGGCATTGGTCAGAACCAACTTAACCCGGGAAGCCAATTGAATCGCCATCTTAGCCAGTTTTCTGGCACTGCTAATAGTGCATTGTTTAATGCTGCTCAAACGACACCAAGTCAAATGATACCAAACATGTCGGCTACTATGTCCTCGCCATCAGTTCTGCCACGAATGCAGTTCGAAATGCCTGGTAGCAATCCTCAGAGGAGTCACGCTTCCCAAATTTTGAGTGATCAAATGTTTAATATGGGAGCAGCAAATACCGGTGGTATGATGCCTCTACAACAGCAGCTGCAGCAGCAGCAGCAGCAGCAACTGCAACATGGTTCACAAGGTTCGTTCGGAAACATTCCGCCGAATGCTCAGAATCTGCAGTCTAATATGGTAGCACTTCAGAGCACACCACAAAATCATCCCAATTTTGGCCAGCAGAGACAACAAAACCAGCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

543

Amino Acids

59.4

Weight (kDa)

8.97

Isoelectric Point (pI)

60.78

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008407)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G03070
fragaria_vesca	FvH4_4g04880 FvH4_4g04880 FvH4_4g04880 FvH4_4g04880
malus_domestica	MD16G1227300.v1.1
prunus_persica	Prupe.1G049400_v2.0.a1 Prupe.1G049400_v2.0.a1
pyrus_communis	pycom16g19050
rosa_chinensis	RchiOBHm_Chr4g0395701 RchiOBHm_Chr4g0395721
rosa_laevigata	RLG00000009603
rosa_multiflora	Rmu_sc0005389.1_g000008 Rmu_sc0005389.1_g000017
rosa_roxburghii	Rroxscaffold_5G00340570
rosa_rugosa	Rorug03G0354600 Rorug03G0354700 Rorug03G0354800
rosa_samantha	Rh4BG061100 Rh4CG067300 Rh4DG056500
rosa_wichuraiana	Rw4G004910 Rw4G004950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	707
Acc36I	ACCTGC	2 cut(s)	707, 805
AccB1I	GGYRCC	1 cut(s)	1134
AccB7I	CCANNNNNTGG	1 cut(s)	929
AccI	GTMKAC	1 cut(s)	264
AciI	CCGC	7 cut(s)	6, 53, 56, 68, 157, 902, 1529
AclWI	GGATC	1 cut(s)	832
AcoI	YGGCCR	2 cut(s)	3, 1600
AcsI	RAATTY	2 cut(s)	594, 1398
AcuI	CTGAAG	2 cut(s)	762, 1553
AcyI	GRCGYC	1 cut(s)	87
AfaI	GTAC	5 cut(s)	230, 708, 758, 934, 1176
AfiI	CCNNNNNNNGG	2 cut(s)	929, 1598
AflII	CTTAAG	1 cut(s)	455
AflIII	ACRYGT	2 cut(s)	1171, 1308
AgeI	ACCGGT	1 cut(s)	1439
AgsI	TTSAA	7 cut(s)	145, 256, 383, 599, 876, 1148, 1222
AhdI	GACNNNNNGTC	1 cut(s)	1290
AjnI	CCWGG	4 cut(s)	655, 856, 1044, 1363
AluBI	AGCT	8 cut(s)	103, 250, 361, 454, 482, 527, 848, 1468
AluI	AGCT	8 cut(s)	103, 250, 361, 454, 482, 527, 848, 1468
Alw21I	GWGCWC	3 cut(s)	252, 303, 1577
Alw26I	GTCTC	3 cut(s)	70, 286, 1603
Alw44I	GTGCAC	1 cut(s)	299
AlwI	GGATC	1 cut(s)	832
AlwNI	CAGNNNCTG	5 cut(s)	103, 1129, 1468, 1492, 1546
Ama87I	CYCGRG	4 cut(s)	110, 126, 245, 1207
AoxI	GGCC	5 cut(s)	3, 114, 288, 842, 1600
ApaLI	GTGCAC	1 cut(s)	299
ApoI	RAATTY	2 cut(s)	594, 1398
AsiGI	ACCGGT	1 cut(s)	1439
Asp700I	GAANNNNTTC	1 cut(s)	18
AspLEI	GCGC	1 cut(s)	583
AsuC2I	CCSGG	2 cut(s)	1208, 1209
AsuHPI	GGTGA	2 cut(s)	731, 912
AsuII	TTCGAA	1 cut(s)	1356
AvaI	CYCGRG	4 cut(s)	110, 126, 245, 1207
BaeGI	GKGCMC	2 cut(s)	303, 1137
BaeI	ACNNNNGTAYC	2 cut(s)	759, 792
BalI	TGGCCA	1 cut(s)	1602
BanI	GGYRCC	1 cut(s)	1134
BanII	GRGCYC	2 cut(s)	252, 806
BbsI	GAAGAC	2 cut(s)	174, 390
Bbv12I	GWGCWC	3 cut(s)	252, 303, 1577
BbvCI	CCTCAGC	2 cut(s)	39, 1029
BccI	CCATC	7 cut(s)	140, 158, 367, 716, 961, 1236, 1339
BceAI	ACGGC	2 cut(s)	74, 101
BciT130I	CCWGG	4 cut(s)	657, 858, 1046, 1365
BclI	TGATCA	1 cut(s)	1408
BcnI	CCSGG	2 cut(s)	1208, 1209
BcoDI	GTCTC	3 cut(s)	70, 286, 1603
BfmI	CTRYAG	3 cut(s)	624, 1469, 1547
BfrI	CTTAAG	1 cut(s)	455
BfuAI	ACCTGC	2 cut(s)	707, 805
BglI	GCCNNNNNGGC	2 cut(s)	208, 1132
BlpI	GCTNAGC	1 cut(s)	1050
BmcAI	AGTACT	1 cut(s)	230
Bme1390I	CCNGG	6 cut(s)	657, 858, 1046, 1208, 1209, 1365
BmeRI	GACNNNNNGTC	1 cut(s)	1290
BmeT110I	CYCGRG	4 cut(s)	110, 126, 245, 1207
BmiI	GGNNCC	2 cut(s)	541, 1136
BmrFI	CCNGG	6 cut(s)	657, 858, 1046, 1208, 1209, 1365
BmrI	ACTGGG	1 cut(s)	1139
BmsI	GCATC	7 cut(s)	703, 755, 860, 1008, 1042, 1114, 1440
BmuI	ACTGGG	1 cut(s)	1139
BpiI	GAAGAC	2 cut(s)	174, 390
BpmI	CTGGAG	2 cut(s)	8, 678
Bpu10I	CCTNAGC	3 cut(s)	39, 221, 1029
Bpu1102I	GCTNAGC	1 cut(s)	1050
Bpu14I	TTCGAA	1 cut(s)	1356
BpuMI	CCSGG	2 cut(s)	1208, 1209
BsaHI	GRCGYC	1 cut(s)	87
BsaI	GGTCTC	1 cut(s)	286
BsaJI	CCNNGG	7 cut(s)	9, 63, 234, 285, 330, 923, 1207
BsaWI	WCCGGW	1 cut(s)	1439
BsaXI	ACNNNNNCTCC	4 cut(s)	883, 913, 940, 970
Bsc4I	CCNNNNNNNGG	2 cut(s)	929, 1598
Bse118I	RCCGGY	1 cut(s)	1439
Bse1I	ACTGG	4 cut(s)	226, 341, 1134, 1237
Bse3DI	GCAATG	1 cut(s)	1080
BseBI	CCWGG	4 cut(s)	657, 858, 1046, 1365
BseDI	CCNNGG	7 cut(s)	9, 63, 234, 285, 330, 923, 1207
BseGI	GGATG	3 cut(s)	216, 759, 1588
BseLI	CCNNNNNNNGG	2 cut(s)	929, 1598
BseMI	GCAATG	1 cut(s)	1080
BseMII	CTCAG	8 cut(s)	53, 212, 724, 1043, 1064, 1136, 1391, 1553
BseNI	ACTGG	4 cut(s)	226, 341, 1134, 1237
BseRI	GAGGAG	3 cut(s)	27, 948, 1396
BseSI	GKGCMC	2 cut(s)	303, 1137
BsgI	GTGCAG	3 cut(s)	113, 516, 735
BshFI	GGCC	5 cut(s)	5, 116, 290, 844, 1602
BshNI	GGYRCC	1 cut(s)	1134
BshTI	ACCGGT	1 cut(s)	1439
BsiHKAI	GWGCWC	3 cut(s)	252, 303, 1577
BsiHKCI	CYCGRG	4 cut(s)	110, 126, 245, 1207
BsiSI	CCGG	3 cut(s)	368, 1208, 1440
BslI	CCNNNNNNNGG	2 cut(s)	929, 1598
BsmAI	GTCTC	3 cut(s)	70, 286, 1603
BsmI	GAATGC	5 cut(s)	159, 552, 679, 1353, 1540
BsnI	GGCC	5 cut(s)	5, 116, 290, 844, 1602
Bso31I	GGTCTC	1 cut(s)	286
BsoBI	CYCGRG	4 cut(s)	110, 126, 245, 1207
Bsp119I	TTCGAA	1 cut(s)	1356
Bsp1286I	GDGCHC	5 cut(s)	252, 303, 806, 1137, 1577
Bsp1407I	TGTACA	1 cut(s)	1174
Bsp143I	GATC	3 cut(s)	661, 824, 1408
Bsp1720I	GCTNAGC	1 cut(s)	1050
Bsp19I	CCATGG	3 cut(s)	9, 63, 234
BspACI	CCGC	7 cut(s)	6, 53, 56, 68, 157, 902, 1529
BspANI	GGCC	5 cut(s)	5, 116, 290, 844, 1602
BspCNI	CTCAG	8 cut(s)	52, 213, 723, 1042, 1063, 1135, 1390, 1552
BspLI	GGNNCC	2 cut(s)	541, 1136
BspMAI	CTGCAG	3 cut(s)	628, 1473, 1551
BspMI	ACCTGC	2 cut(s)	707, 805
BspPI	GGATC	1 cut(s)	832
BspQI	GCTCTTC	1 cut(s)	257
BspT104I	TTCGAA	1 cut(s)	1356
BspT107I	GGYRCC	1 cut(s)	1134
BspTI	CTTAAG	1 cut(s)	455
BspTNI	GGTCTC	1 cut(s)	286
BsrDI	GCAATG	1 cut(s)	1080
BsrFI	RCCGGY	1 cut(s)	1439
BsrGI	TGTACA	1 cut(s)	1174
BsrI	ACTGG	4 cut(s)	226, 341, 1134, 1237
BssAI	RCCGGY	1 cut(s)	1439
BssECI	CCNNGG	7 cut(s)	9, 63, 234, 285, 330, 923, 1207
BssMI	GATC	3 cut(s)	661, 824, 1408
BssNI	GRCGYC	1 cut(s)	87
BssT1I	CCWWGG	5 cut(s)	9, 63, 234, 285, 923
Bst2UI	CCWGG	4 cut(s)	657, 858, 1046, 1365
Bst4CI	ACNGT	3 cut(s)	334, 533, 651
Bst6I	CTCTTC	2 cut(s)	146, 257
BstACI	GRCGYC	1 cut(s)	87
BstAFI	CTTAAG	1 cut(s)	455
BstAPI	GCANNNNNTGC	2 cut(s)	1111, 1492
BstAUI	TGTACA	1 cut(s)	1174
BstBI	TTCGAA	1 cut(s)	1356
BstC8I	GCNNGC	4 cut(s)	585, 846, 974, 1604
BstDEI	CTNAG	9 cut(s)	39, 221, 710, 1029, 1050, 1122, 1232, 1377, 1539
BstDSI	CCRYGG	4 cut(s)	9, 63, 234, 330
BstEII	GGTNACC	1 cut(s)	651
BstF5I	GGATG	3 cut(s)	216, 759, 1588
BstHHI	GCGC	1 cut(s)	583
BstKTI	GATC	3 cut(s)	664, 827, 1411
BstMAI	GTCTC	3 cut(s)	70, 286, 1603
BstMBI	GATC	3 cut(s)	661, 824, 1408
BstNI	CCWGG	4 cut(s)	657, 858, 1046, 1365
BstNSI	RCATGY	2 cut(s)	1175, 1312
BstPI	GGTNACC	1 cut(s)	651
BstSCI	CCNGG	6 cut(s)	655, 856, 1044, 1206, 1207, 1363
BstSFI	CTRYAG	3 cut(s)	624, 1469, 1547
BstSLI	GKGCMC	2 cut(s)	303, 1137
BstV2I	GAAGAC	2 cut(s)	174, 390
BstXI	CCANNNNNNTGG	2 cut(s)	70, 1244
BsuRI	GGCC	5 cut(s)	5, 116, 290, 844, 1602
BtgI	CCRYGG	4 cut(s)	9, 63, 234, 330
BtsCI	GGATG	3 cut(s)	216, 759, 1588
BtsI	GCAGTG	1 cut(s)	1248
BtsIMutI	CAGTG	4 cut(s)	348, 718, 1127, 1248
BveI	ACCTGC	2 cut(s)	707, 805
Cac8I	GCNNGC	4 cut(s)	585, 846, 974, 1604
CaiI	CAGNNNCTG	5 cut(s)	103, 1129, 1468, 1492, 1546
CfoI	GCGC	1 cut(s)	583
Cfr10I	RCCGGY	1 cut(s)	1439
Cfr9I	CCCGGG	1 cut(s)	1207
CseI	GACGC	1 cut(s)	95
Csp6I	GTAC	5 cut(s)	229, 707, 757, 933, 1175
CspAI	ACCGGT	1 cut(s)	1439
CviAII	CATG	9 cut(s)	10, 64, 235, 413, 1097, 1172, 1181, 1309, 1499
CviQI	GTAC	5 cut(s)	229, 707, 757, 933, 1175
DdeI	CTNAG	9 cut(s)	39, 221, 710, 1029, 1050, 1122, 1232, 1377, 1539
DpnI	GATC	3 cut(s)	663, 826, 1410
DpnII	GATC	3 cut(s)	661, 824, 1408
DriI	GACNNNNNGTC	1 cut(s)	1290
EaeI	YGGCCR	2 cut(s)	3, 1600
Eam1104I	CTCTTC	2 cut(s)	146, 257
Eam1105I	GACNNNNNGTC	1 cut(s)	1290
EarI	CTCTTC	2 cut(s)	146, 257
EciI	GGCGGA	1 cut(s)	1518
Ecl136II	GAGCTC	1 cut(s)	250
Eco130I	CCWWGG	5 cut(s)	9, 63, 234, 285, 923
Eco147I	AGGCCT	1 cut(s)	290
Eco24I	GRGCYC	2 cut(s)	252, 806
Eco31I	GGTCTC	1 cut(s)	286
Eco53kI	GAGCTC	1 cut(s)	250
Eco57I	CTGAAG	2 cut(s)	762, 1553
Eco88I	CYCGRG	4 cut(s)	110, 126, 245, 1207
Eco91I	GGTNACC	1 cut(s)	651
EcoICRI	GAGCTC	1 cut(s)	250
EcoO65I	GGTNACC	1 cut(s)	651
EcoRII	CCWGG	4 cut(s)	655, 856, 1044, 1363
EcoT14I	CCWWGG	5 cut(s)	9, 63, 234, 285, 923
EcoT22I	ATGCAT	1 cut(s)	696
EcoT38I	GRGCYC	2 cut(s)	252, 806
ErhI	CCWWGG	5 cut(s)	9, 63, 234, 285, 923
FaeI	CATG	9 cut(s)	13, 67, 238, 416, 1100, 1175, 1184, 1312, 1502
FalI	AAGNNNNNCTT	2 cut(s)	597, 629
FatI	CATG	9 cut(s)	9, 63, 234, 412, 1096, 1171, 1180, 1308, 1498
FauI	CCCGC	1 cut(s)	164
FauNDI	CATATG	1 cut(s)	910
FbaI	TGATCA	1 cut(s)	1408
FblI	GTMKAC	1 cut(s)	264
FokI	GGATG	3 cut(s)	203, 766, 1575
FriOI	GRGCYC	2 cut(s)	252, 806
GlaI	GCGC	1 cut(s)	582
GsuI	CTGGAG	2 cut(s)	8, 678
HaeIII	GGCC	5 cut(s)	5, 116, 290, 844, 1602
HapII	CCGG	3 cut(s)	368, 1208, 1440
HgaI	GACGC	1 cut(s)	95
HhaI	GCGC	1 cut(s)	583
Hin1I	GRCGYC	1 cut(s)	87
Hin1II	CATG	9 cut(s)	13, 67, 238, 416, 1100, 1175, 1184, 1312, 1502
Hin6I	GCGC	1 cut(s)	581
HinP1I	GCGC	1 cut(s)	581
HincII	GTYRAC	4 cut(s)	241, 265, 316, 631
HindII	GTYRAC	4 cut(s)	241, 265, 316, 631
HindIII	AAGCTT	2 cut(s)	452, 525
HinfI	GANTC	5 cut(s)	106, 610, 1222, 1384, 1543
HpaI	GTTAAC	1 cut(s)	631
HpaII	CCGG	3 cut(s)	368, 1208, 1440
HphI	GGTGA	2 cut(s)	731, 912
Hpy166II	GTNNAC	7 cut(s)	241, 265, 301, 316, 631, 647, 1505
Hpy188I	TCNGA	8 cut(s)	558, 620, 801, 1194, 1380, 1520, 1542, 1572
Hpy188III	TCNNGA	9 cut(s)	25, 110, 121, 164, 220, 572, 599, 822, 1167
Hpy8I	GTNNAC	7 cut(s)	241, 265, 301, 316, 631, 647, 1505
Hpy99I	CGWCG	3 cut(s)	89, 266, 269
HpyAV	CCTTC	4 cut(s)	8, 301, 635, 834
HpyCH4III	ACNGT	3 cut(s)	334, 533, 651
HpyCH4IV	ACGT	1 cut(s)	312
HpyF3I	CTNAG	9 cut(s)	39, 221, 710, 1029, 1050, 1122, 1232, 1377, 1539
HpySE526I	ACGT	1 cut(s)	312
Hsp92I	GRCGYC	1 cut(s)	87
Hsp92II	CATG	9 cut(s)	13, 67, 238, 416, 1100, 1175, 1184, 1312, 1502
HspAI	GCGC	1 cut(s)	581
Ksp22I	TGATCA	1 cut(s)	1408
KspAI	GTTAAC	1 cut(s)	631
Kzo9I	GATC	3 cut(s)	661, 824, 1408
LguI	GCTCTTC	1 cut(s)	257
LmnI	GCTCC	3 cut(s)	400, 479, 1427
LweI	GCATC	7 cut(s)	703, 755, 860, 1008, 1042, 1114, 1440
MaeII	ACGT	1 cut(s)	312
MaeIII	GTNAC	3 cut(s)	651, 785, 1385
MalI	GATC	3 cut(s)	663, 826, 1410
MboI	GATC	3 cut(s)	661, 824, 1408
MboII	GAAGA	6 cut(s)	133, 179, 244, 395, 429, 605
MfeI	CAATTG	2 cut(s)	404, 1217
MhlI	GDGCHC	5 cut(s)	252, 303, 806, 1137, 1577
MlsI	TGGCCA	1 cut(s)	1602
MluNI	TGGCCA	1 cut(s)	1602
MlyI	GAGTC	1 cut(s)	1393
Mox20I	TGGCCA	1 cut(s)	1602
Mph1103I	ATGCAT	1 cut(s)	696
MroXI	GAANNNNTTC	1 cut(s)	18
MscI	TGGCCA	1 cut(s)	1602
MseI	TTAA	5 cut(s)	456, 630, 1203, 1269, 1419
MslI	CAYNNNNRTG	1 cut(s)	68
Msp20I	TGGCCA	1 cut(s)	1602
MspA1I	CMGCKG	4 cut(s)	103, 848, 904, 1468
MspCI	CTTAAG	1 cut(s)	455
MspI	CCGG	3 cut(s)	368, 1208, 1440
MspR9I	CCNGG	6 cut(s)	657, 858, 1046, 1208, 1209, 1365
MunI	CAATTG	2 cut(s)	404, 1217
Mva1269I	GAATGC	5 cut(s)	159, 552, 679, 1353, 1540
MvaI	CCWGG	4 cut(s)	657, 858, 1046, 1365
NciI	CCSGG	2 cut(s)	1208, 1209
NcoI	CCATGG	3 cut(s)	9, 63, 234
NdeI	CATATG	1 cut(s)	910
NdeII	GATC	3 cut(s)	661, 824, 1408
NlaIII	CATG	9 cut(s)	13, 67, 238, 416, 1100, 1175, 1184, 1312, 1502
NlaIV	GGNNCC	2 cut(s)	541, 1136
NmuCI	GTSAC	1 cut(s)	1385
NsiI	ATGCAT	1 cut(s)	696
NspI	RCATGY	2 cut(s)	1175, 1312
NspV	TTCGAA	1 cut(s)	1356
PaeR7I	CTCGAG	2 cut(s)	110, 245
PaqCI	CACCTGC	1 cut(s)	707
PceI	AGGCCT	1 cut(s)	290
PciI	ACATGT	2 cut(s)	1171, 1308
PciSI	GCTCTTC	1 cut(s)	257
PcsI	WCGNNNNNNNCGW	1 cut(s)	318
PctI	GAATGC	5 cut(s)	159, 552, 679, 1353, 1540
PdmI	GAANNNNTTC	1 cut(s)	18
PfeI	GAWTC	4 cut(s)	106, 610, 1222, 1543
PflMI	CCANNNNNTGG	1 cut(s)	929
PinAI	ACCGGT	1 cut(s)	1439
PleI	GAGTC	1 cut(s)	1392
PpsI	GAGTC	1 cut(s)	1392
PscI	ACATGT	2 cut(s)	1171, 1308
Psp124BI	GAGCTC	1 cut(s)	252
Psp6I	CCWGG	4 cut(s)	655, 856, 1044, 1363
PspEI	GGTNACC	1 cut(s)	651
PspGI	CCWGG	4 cut(s)	655, 856, 1044, 1363
PspN4I	GGNNCC	2 cut(s)	541, 1136
PspXI	VCTCGAGB	1 cut(s)	245
PstI	CTGCAG	3 cut(s)	628, 1473, 1551
PstNI	CAGNNNCTG	5 cut(s)	103, 1129, 1468, 1492, 1546
PvuII	CAGCTG	3 cut(s)	103, 848, 1468
RsaI	GTAC	5 cut(s)	230, 708, 758, 934, 1176
RsaNI	GTAC	5 cut(s)	229, 707, 757, 933, 1175
RseI	CAYNNNNRTG	1 cut(s)	68
SacI	GAGCTC	1 cut(s)	252
SalI	GTCGAC	1 cut(s)	263
SapI	GCTCTTC	1 cut(s)	257
SaqAI	TTAA	5 cut(s)	456, 630, 1203, 1269, 1419
Sau3AI	GATC	3 cut(s)	661, 824, 1408
ScaI	AGTACT	1 cut(s)	230
SchI	GAGTC	1 cut(s)	1393
ScrFI	CCNGG	6 cut(s)	657, 858, 1046, 1208, 1209, 1365
SduI	GDGCHC	5 cut(s)	252, 303, 806, 1137, 1577
SfaNI	GCATC	7 cut(s)	703, 755, 860, 1008, 1042, 1114, 1440
SfcI	CTRYAG	3 cut(s)	624, 1469, 1547
Sfr274I	CTCGAG	2 cut(s)	110, 245
SfuI	TTCGAA	1 cut(s)	1356
SgrDI	CGTCGACG	1 cut(s)	263
SlaI	CTCGAG	2 cut(s)	110, 245
SmaI	CCCGGG	1 cut(s)	1209
SmiMI	CAYNNNNRTG	1 cut(s)	68
SmlI	CTYRAG	3 cut(s)	110, 245, 455
SmoI	CTYRAG	3 cut(s)	110, 245, 455
SseBI	AGGCCT	1 cut(s)	290
SsiI	CCGC	7 cut(s)	6, 53, 56, 68, 157, 902, 1529
SstI	GAGCTC	1 cut(s)	252
StuI	AGGCCT	1 cut(s)	290
StyD4I	CCNGG	6 cut(s)	655, 856, 1044, 1206, 1207, 1363
StyI	CCWWGG	5 cut(s)	9, 63, 234, 285, 923
TaaI	ACNGT	3 cut(s)	334, 533, 651
TaiI	ACGT	1 cut(s)	315
TaqI	TCGA	5 cut(s)	111, 165, 246, 264, 1356
TatI	WGTACW	4 cut(s)	228, 706, 756, 1174
TauI	GCSGC	2 cut(s)	8, 58
TfiI	GAWTC	4 cut(s)	106, 610, 1222, 1543
Tru1I	TTAA	5 cut(s)	456, 630, 1203, 1269, 1419
Tru9I	TTAA	5 cut(s)	456, 630, 1203, 1269, 1419
TscAI	CASTG	4 cut(s)	348, 718, 1134, 1255
TseFI	GTSAC	1 cut(s)	1385
Tsp45I	GTSAC	1 cut(s)	1385
TspDTI	ATGAA	2 cut(s)	401, 959
TspMI	CCCGGG	1 cut(s)	1207
TspRI	CASTG	4 cut(s)	348, 718, 1134, 1255
Van91I	CCANNNNNTGG	1 cut(s)	929
Vha464I	CTTAAG	1 cut(s)	455
VneI	GTGCAC	1 cut(s)	299
XapI	RAATTY	2 cut(s)	594, 1398
XceI	RCATGY	2 cut(s)	1175, 1312
XcmI	CCANNNNNNNNNTGG	1 cut(s)	292
XhoI	CTCGAG	2 cut(s)	110, 245
XmaI	CCCGGG	1 cut(s)	1207
XmiI	GTMKAC	1 cut(s)	264
XmnI	GAANNNNTTC	1 cut(s)	18
ZrmI	AGTACT	1 cut(s)	230
Zsp2I	ATGCAT	1 cut(s)	696

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.