pycom16g19970

Superkiller viralicidic activity 2-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0005703
Physical Location & Seq
Reverse (-)
17432264 .. 17436929
4666 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2187 bp
ATGGAAGAATCTCCAACACCTGTGAAACGAAAAGAACCTGAAGCGTCAGAGATCACAGAAACTCCCACCGATGAATCTTCCCTGAAGCGAAGGCATTTGACTCGAACATGTGTGCATGAGGTTGCAGTTCCCAGTGACTATGCTTCGACCAAGGATGAGTCGGTTTATGGAACCCTTTCGAATCCTGTGTATAATGGCGAGGCGGCCAAGACATACGAATTTACCCTTGACCCATTTCAGCAGATTTCTGTGGCATGCTTAGAACGGAAAGAGTCAGTTTTGGTCTCCGCCCATACTTCAGCAGGTAAGACTGCAGTTGCGGAGTATGCAATTGCCATGGCTTTTAGAGACAAGCAGAGGGTTATATATACTTCGCCATTGAAGGCTTTGAGCAATCAGAAATATAGAGAGCTCAGCCAGGAGTTTGAAGATGTTGGATTGATGACTGGAGATGTTACACTCTCACCTAATGCTAGTTGTTTGGTTATGACAACTGAGATCCTTAGGGGAATGCTTTACAGGGGTTCCGAGGTTTTAAAGGAAGTCGCCTGGGTTATCTTCGATGAAATTCACTACATGAAGGATCGTGAAAGAGGGGTTGTTTGGGAAGAGAGTATTATATTTATGCCTCCTGCTGTTAAAATGGTTTTTCTTTCAGCCACAATGTCCAATGCGACTGAGTTTGCAGAGTGGATTTGTAATTTGCACAAACAGCCTTGTCATGTGGTGTACACAGATTTTCGACCAACTCCTCTGCAGCATTACGTTTTTCCAGTGGGTGGGAATGGGTTGTATCTTGTGGTCGATGAGAATGAACAATTCAGGGAGGAAAATTTTGTGAAGCTACATGATACTTTCTCAAAGCAGAAATTGGGTGATGGTCACAGGAATAACAAGGCAAGTGGGAGACTTGCAAAAGGTGGGACTGCATCTGGGGGTTCTGACATATTCAAAATTGTGAAGATGATTATGGAACGGAAATTTCAGCCAGTTATAATTTTCAGCTTCAGTAGAAGAGAGTGTGAACAACATGCGATGTCCATGTCTAAGCTTGATTTTAACAGCCAAGACGAAAAAGATGCTGTTGAACAGGTTTTTCGTAATGCAATACTCTGCTTAAACGAGGAAGACAGGGAGTTGCCTGCTATTGAGTTAATGCTGCCACTCCTTCAACGAGGAATTGCTGTTCATCATTCTGGCCTTCTACCTGTTATCAAGGAACTGGTAGAACTTCTTTTCCAAGAAGGCCTTGTAAAAGCCCTTTTTGCTACTGAGACATTTGCAATGGGCTTAAACATGCCAGCAAAAACTGTTGTTTTCACAGCTGTTAAGAAGTGGGATGGTGATAGTCATCGATATATCGGATCTGGTGAGTATATTCAGATGAGTGGAAGGGCTGGGCGTCGTGGCAAAGATGAGCGGGGTATTTGTATCATAATGATTGATGAACAGATGGAAATGAACACACTAAAGGATATGGTTTTGGGTAAACCAGCTCCTCTAGTTAGCACTTTCAGACTCAGTTATTACTCAATTTTGAATTTGTTGAGCCGTGCGGAAGGCCAATTCACAGCTGAACACGTGATAAAGAATTCATTCCACCAATTTCAGTATGAAAAGGCTTTGCCTGGTATAGGGGAAAAGGTTTCAAAGCTTGAGCAGGAAGCGGCTTTGCTTGATGCATCAGGAGAGGCTGAAGTTGCTGAGTATCATAAGATAAAACTTGATATAGCTCAACTTGAGAAGAAAATGATGTCAGAGATAACGAGGCCTGAAAGAGTTCTGTATTTTCTTCTTCCTGGCCGCCTGGTCAAGATTAGGGAAGGTGGTACAGATTGGGGCTGGGGAGTTGTAGTTAATGTGGTAAAAAAGCCTTCATCCGGGTTAGGCACACTGTCCTCGCGTGGTGGTGGGTATATAGTGGATACTTTGCTCCACTGTTCTCCTGGTTCAAGTGAGAACAGTTCACAGCCAAAGCCTTGCCCTCCTCGCCCTGGAGAAAAGGGTGAAATGCATGTAGTCCCTGTACAATTGCCCCTGATTTCTGCTCTAAGCAAACTCAGAATATCTATTCCCTCTGATTTGCGGCCGTTAGAGGCAAGGCAAAGTATTCTTCTAGCAGTTCAGGAGCTGGGAACTCGTTTTCCACAAGGTCTTCCAAAGCTGAATCCTGTAAAGGGGCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000184 GO:0000288 GO:0000291 GO:0000956 GO:0003002 GO:0003006 GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006396 GO:0006397 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0007275 GO:0007389 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009056 GO:0009057 GO:0009653 GO:0009791 GO:0009892 GO:0009893 GO:0009908 GO:0009987 GO:0010093 GO:0010467 GO:0010468 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0016070 GO:0016071 GO:0016462 GO:0016604 GO:0016607 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019222 GO:0019439 GO:0022414 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0034427 GO:0034641 GO:0034655 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043928 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0046700 GO:0048367 GO:0048437 GO:0048444 GO:0048449 GO:0048518 GO:0048519 GO:0048523 GO:0048608 GO:0048646 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0055087 GO:0060147 GO:0060149 GO:0060255 GO:0060968 GO:0060969 GO:0061458 GO:0065007 GO:0070013 GO:0070035 GO:0070478 GO:0071704 GO:0090304 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0090701 GO:0099402 GO:0140098 GO:1901360 GO:1901361 GO:1901575 GO:1905392 GO:1905393
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
DEAD DSHCT Helicase_C rRNA_proc-arch

Protein Analysis

729

Amino Acids

81.43

Weight (kDa)

6.39

Isoelectric Point (pI)

47.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DEAD PF00270 78 - 226 1.8e-26 DEAD/DEAH box helicase
DEXQc_Suv3 PF22527 93 - 210 1.2e-08 DEXQ-box helicase domain of Suv3
Helicase_C PF00271 384 - 470 1.7e-06 Helicase conserved C-terminal domain
MTR4-like_stalk PF21408 526 - 589 3.2e-16 Exosome RNA helicase MTR4-like, stalk
MTR4_beta-barrel PF13234 591 - 726 2.1e-38 Mtr4-like, beta-barrel domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 995
Acc36I ACCTGC 1 cut(s) 293
AccB7I CCANNNNNTGG 1 cut(s) 779
AccBSI CCGCTC 1 cut(s) 1420
AccII CGCG 1 cut(s) 1903
AciI CCGC 8 cut(s) 203, 288, 320, 1420, 1556, 1667, 1804, 2086
AclWI GGATC 3 cut(s) 493, 591, 1372
AcoI YGGCCR 3 cut(s) 204, 1801, 2087
AcsI RAATTY 6 cut(s) 218, 567, 832, 980, 1540, 1591
AcuI CTGAAG 5 cut(s) 60, 104, 282, 991, 1716
AcvI CACGTG 1 cut(s) 1582
AcyI GRCGYC 1 cut(s) 1402
AfaI GTAC 3 cut(s) 731, 1831, 2028
AfiI CCNNNNNNNGG 5 cut(s) 779, 1634, 1880, 1994, 2177
AflIII ACRYGT 2 cut(s) 107, 1579
AgsI TTSAA 8 cut(s) 382, 428, 952, 1088, 1172, 1540, 1650, 1953
AjnI CCWGG 7 cut(s) 417, 548, 1627, 1798, 1806, 1945, 1993
AloI GAACNNNNNNTCC 6 cut(s) 1170, 1202, 1221, 1253, 2128, 2160
Alw21I GWGCWC 1 cut(s) 414
Alw26I GTCTC 4 cut(s) 289, 342, 901, 1268
AlwI GGATC 3 cut(s) 493, 591, 1372
AlwNI CAGNNNCTG 1 cut(s) 2131
AoxI GGCC 7 cut(s) 204, 1198, 1246, 1561, 1769, 1801, 2087
ApeKI GCWGC 2 cut(s) 757, 1159
ApoI RAATTY 6 cut(s) 218, 567, 832, 980, 1540, 1591
Asp700I GAANNNNTTC 3 cut(s) 175, 1595, 1779
AsuC2I CCSGG 1 cut(s) 1882
AsuHPI GGTGA 5 cut(s) 456, 887, 1355, 1382, 2018
AsuII TTCGAA 1 cut(s) 179
AxyI CCTNAGG 1 cut(s) 503
BanII GRGCYC 1 cut(s) 414
BbrPI CACGTG 1 cut(s) 1582
BbsI GAAGAC 2 cut(s) 1134, 2147
Bbv12I GWGCWC 1 cut(s) 414
BbvI GCAGC 2 cut(s) 769, 1146
BccI CCATC 3 cut(s) 872, 1334, 1447
BceAI ACGGC 2 cut(s) 1536, 2074
BcgI CGANNNNNNTGC 4 cut(s) 83, 117, 1061, 1095
BciT130I CCWGG 7 cut(s) 419, 550, 1629, 1800, 1808, 1947, 1995
BciVI GTATCC 1 cut(s) 1918
BcnI CCSGG 1 cut(s) 1882
BcoDI GTCTC 4 cut(s) 289, 342, 901, 1268
BfaI CTAG 3 cut(s) 474, 1502, 2117
BfmI CTRYAG 2 cut(s) 312, 755
BfuAI ACCTGC 1 cut(s) 293
BfuI GTATCC 1 cut(s) 1918
BisI GCNGC 6 cut(s) 204, 758, 1160, 1668, 1804, 2087
BlpI GCTNAGC 1 cut(s) 413
BlsI GCNGC 6 cut(s) 205, 759, 1161, 1669, 1805, 2088
Bme1390I CCNGG 8 cut(s) 419, 550, 1629, 1800, 1808, 1882, 1947, 1995
BmiI GGNNCC 2 cut(s) 172, 526
BmrFI CCNGG 8 cut(s) 419, 550, 1629, 1800, 1808, 1882, 1947, 1995
BmrI ACTGGG 1 cut(s) 126
BmsI GCATC 4 cut(s) 938, 1069, 1669, 1691
BmuI ACTGGG 1 cut(s) 126
BpiI GAAGAC 2 cut(s) 1134, 2147
BpmI CTGGAG 2 cut(s) 468, 2016
Bpu1102I GCTNAGC 1 cut(s) 413
Bpu14I TTCGAA 1 cut(s) 179
BpuEI CTTGAG 2 cut(s) 1676, 1760
BpuMI CCSGG 1 cut(s) 1882
Bsa29I ATCGAT 1 cut(s) 1354
BsaAI YACGTR 1 cut(s) 1582
BsaBI GATNNNNATC 1 cut(s) 1350
BsaHI GRCGYC 1 cut(s) 1402
BsaI GGTCTC 1 cut(s) 289
BsaJI CCNNGG 5 cut(s) 150, 336, 528, 549, 1993
BsaXI ACNNNNNCTCC 4 cut(s) 46, 76, 1839, 1869
Bsc4I CCNNNNNNNGG 5 cut(s) 779, 1634, 1880, 1994, 2177
Bse1I ACTGG 5 cut(s) 132, 451, 773, 989, 1227
Bse21I CCTNAGG 1 cut(s) 503
Bse3DI GCAATG 1 cut(s) 1290
Bse8I GATNNNNATC 1 cut(s) 1350
BseBI CCWGG 7 cut(s) 419, 550, 1629, 1800, 1808, 1947, 1995
BseCI ATCGAT 1 cut(s) 1354
BseDI CCNNGG 5 cut(s) 150, 336, 528, 549, 1993
BseGI GGATG 3 cut(s) 160, 1345, 1877
BseJI GATNNNNATC 1 cut(s) 1350
BseLI CCNNNNNNNGG 5 cut(s) 779, 1634, 1880, 1994, 2177
BseMI GCAATG 1 cut(s) 1290
BseMII CTCAG 7 cut(s) 427, 486, 669, 1263, 1534, 1695, 2074
BseNI ACTGG 5 cut(s) 132, 451, 773, 989, 1227
BseRI GAGGAG 3 cut(s) 741, 1488, 1977
BseX3I CGGCCG 1 cut(s) 2087
BseXI GCAGC 2 cut(s) 769, 1146
BseYI CCCAGC 3 cut(s) 1397, 1842, 2131
Bsh1236I CGCG 1 cut(s) 1903
Bsh1285I CGRYCG 1 cut(s) 2090
BshFI GGCC 7 cut(s) 206, 1200, 1248, 1563, 1771, 1803, 2089
BshVI ATCGAT 1 cut(s) 1354
BsiEI CGRYCG 1 cut(s) 2090
BsiHKAI GWGCWC 1 cut(s) 414
BsiSI CCGG 1 cut(s) 1881
BslFI GGGAC 2 cut(s) 937, 2006
BslI CCNNNNNNNGG 5 cut(s) 779, 1634, 1880, 1994, 2177
BsmAI GTCTC 4 cut(s) 289, 342, 901, 1268
BsmFI GGGAC 2 cut(s) 937, 2006
BsmI GAATGC 1 cut(s) 516
BsnI GGCC 7 cut(s) 206, 1200, 1248, 1563, 1771, 1803, 2089
Bso31I GGTCTC 1 cut(s) 289
Bsp119I TTCGAA 1 cut(s) 179
Bsp1286I GDGCHC 1 cut(s) 414
Bsp1407I TGTACA 2 cut(s) 729, 2026
Bsp143I GATC 4 cut(s) 51, 498, 583, 1364
Bsp1720I GCTNAGC 1 cut(s) 413
Bsp19I CCATGG 1 cut(s) 336
BspACI CCGC 8 cut(s) 203, 288, 320, 1420, 1556, 1667, 1804, 2086
BspANI GGCC 7 cut(s) 206, 1200, 1248, 1563, 1771, 1803, 2089
BspCNI CTCAG 7 cut(s) 426, 487, 670, 1264, 1533, 1696, 2073
BspDI ATCGAT 1 cut(s) 1354
BspFNI CGCG 1 cut(s) 1903
BspLI GGNNCC 2 cut(s) 172, 526
BspMAI CTGCAG 2 cut(s) 316, 759
BspMI ACCTGC 1 cut(s) 293
BspPI GGATC 3 cut(s) 493, 591, 1372
BspT104I TTCGAA 1 cut(s) 179
BspTNI GGTCTC 1 cut(s) 289
BsrBI CCGCTC 1 cut(s) 1420
BsrDI GCAATG 1 cut(s) 1290
BsrGI TGTACA 2 cut(s) 729, 2026
BsrI ACTGG 5 cut(s) 132, 451, 773, 989, 1227
BssECI CCNNGG 5 cut(s) 150, 336, 528, 549, 1993
BssMI GATC 4 cut(s) 51, 498, 583, 1364
BssNI GRCGYC 1 cut(s) 1402
BssT1I CCWWGG 2 cut(s) 150, 336
Bst2UI CCWGG 7 cut(s) 419, 550, 1629, 1800, 1808, 1947, 1995
Bst4CI ACNGT 4 cut(s) 1312, 1896, 1940, 1964
Bst6I CTCTTC 2 cut(s) 603, 1009
BstACI GRCGYC 1 cut(s) 1402
BstAUI TGTACA 2 cut(s) 729, 2026
BstBAI YACGTR 1 cut(s) 1582
BstBI TTCGAA 1 cut(s) 179
BstC8I GCNNGC 3 cut(s) 256, 1143, 1302
BstDSI CCRYGG 1 cut(s) 336
BstENI CCTNNNNNAGG 1 cut(s) 1632
BstF5I GGATG 3 cut(s) 160, 1345, 1877
BstFNI CGCG 1 cut(s) 1903
BstKTI GATC 4 cut(s) 54, 501, 586, 1367
BstMAI GTCTC 4 cut(s) 289, 342, 901, 1268
BstMBI GATC 4 cut(s) 51, 498, 583, 1364
BstMCI CGRYCG 1 cut(s) 2090
BstMWI GCNNNNNNNGC 5 cut(s) 326, 712, 1265, 1700, 1989
BstNI CCWGG 7 cut(s) 419, 550, 1629, 1800, 1808, 1947, 1995
BstNSI RCATGY 5 cut(s) 111, 258, 1034, 1300, 2018
BstSCI CCNGG 8 cut(s) 417, 548, 1627, 1798, 1806, 1880, 1945, 1993
BstSFI CTRYAG 2 cut(s) 312, 755
BstUI CGCG 1 cut(s) 1903
BstV1I GCAGC 2 cut(s) 769, 1146
BstV2I GAAGAC 2 cut(s) 1134, 2147
BstX2I RGATCY 2 cut(s) 498, 1364
BstYI RGATCY 2 cut(s) 498, 1364
BstZI CGGCCG 1 cut(s) 2087
Bsu15I ATCGAT 1 cut(s) 1354
Bsu36I CCTNAGG 1 cut(s) 503
BsuI GTATCC 1 cut(s) 1918
BsuRI GGCC 7 cut(s) 206, 1200, 1248, 1563, 1771, 1803, 2089
BsuTUI ATCGAT 1 cut(s) 1354
BtgI CCRYGG 1 cut(s) 336
BtgZI GCGATG 1 cut(s) 1049
BtsCI GGATG 3 cut(s) 160, 1345, 1877
BtsIMutI CAGTG 4 cut(s) 139, 780, 1892, 1936
BveI ACCTGC 1 cut(s) 293
Cac8I GCNNGC 3 cut(s) 256, 1143, 1302
CaiI CAGNNNCTG 1 cut(s) 2131
ClaI ATCGAT 1 cut(s) 1354
CseI GACGC 2 cut(s) 33, 1391
Csp6I GTAC 3 cut(s) 730, 1830, 2027
CspCI CAANNNNNGTGG 2 cut(s) 883, 918
CviQI GTAC 3 cut(s) 730, 1830, 2027
DpnI GATC 4 cut(s) 53, 500, 585, 1366
DpnII GATC 4 cut(s) 51, 498, 583, 1364
DraI TTTAAA 1 cut(s) 537
EaeI YGGCCR 3 cut(s) 204, 1801, 2087
EagI CGGCCG 1 cut(s) 2087
Eam1104I CTCTTC 2 cut(s) 603, 1009
EarI CTCTTC 2 cut(s) 603, 1009
EciI GGCGGA 1 cut(s) 277
Ecl136II GAGCTC 1 cut(s) 412
EclXI CGGCCG 1 cut(s) 2087
Eco130I CCWWGG 2 cut(s) 150, 336
Eco147I AGGCCT 2 cut(s) 1248, 1771
Eco24I GRGCYC 1 cut(s) 414
Eco31I GGTCTC 1 cut(s) 289
Eco52I CGGCCG 1 cut(s) 2087
Eco53kI GAGCTC 1 cut(s) 412
Eco57I CTGAAG 5 cut(s) 60, 104, 282, 991, 1716
Eco72I CACGTG 1 cut(s) 1582
Eco81I CCTNAGG 1 cut(s) 503
EcoICRI GAGCTC 1 cut(s) 412
EcoNI CCTNNNNNAGG 1 cut(s) 1632
EcoRI GAATTC 1 cut(s) 1591
EcoRII CCWGG 7 cut(s) 417, 548, 1627, 1798, 1806, 1945, 1993
EcoT14I CCWWGG 2 cut(s) 150, 336
EcoT22I ATGCAT 2 cut(s) 1684, 2016
EcoT38I GRGCYC 1 cut(s) 414
ErhI CCWWGG 2 cut(s) 150, 336
FalI AAGNNNNNCTT 2 cut(s) 1233, 1265
FaqI GGGAC 2 cut(s) 937, 2006
FauI CCCGC 1 cut(s) 1413
Fnu4HI GCNGC 6 cut(s) 204, 758, 1160, 1668, 1804, 2087
FokI GGATG 3 cut(s) 167, 1352, 1864
FriOI GRGCYC 1 cut(s) 414
Fsp4HI GCNGC 6 cut(s) 204, 758, 1160, 1668, 1804, 2087
FspBI CTAG 3 cut(s) 474, 1502, 2117
GluI GCNGC 6 cut(s) 204, 758, 1160, 1668, 1804, 2087
GsaI CCCAGC 3 cut(s) 1401, 1846, 2135
GsuI CTGGAG 2 cut(s) 468, 2016
HaeIII GGCC 7 cut(s) 206, 1200, 1248, 1563, 1771, 1803, 2089
HapII CCGG 1 cut(s) 1881
HgaI GACGC 2 cut(s) 33, 1391
Hin1I GRCGYC 1 cut(s) 1402
HindIII AAGCTT 2 cut(s) 1049, 1652
HinfI GANTC 8 cut(s) 8, 74, 100, 158, 181, 272, 1518, 2167
HpaII CCGG 1 cut(s) 1881
HphI GGTGA 5 cut(s) 456, 887, 1355, 1382, 2018
Hpy166II GTNNAC 5 cut(s) 730, 732, 1025, 1490, 1967
Hpy188III TCNNGA 4 cut(s) 587, 1686, 1813, 2126
Hpy8I GTNNAC 5 cut(s) 730, 732, 1025, 1490, 1967
Hpy99I CGWCG 1 cut(s) 1407
HpyCH4III ACNGT 4 cut(s) 1312, 1896, 1940, 1964
HpyCH4IV ACGT 2 cut(s) 765, 1581
HpyF10VI GCNNNNNNNGC 5 cut(s) 326, 712, 1265, 1700, 1989
HpySE526I ACGT 2 cut(s) 765, 1581
Hsp92I GRCGYC 1 cut(s) 1402
Kzo9I GATC 4 cut(s) 51, 498, 583, 1364
LmnI GCTCC 3 cut(s) 1501, 1938, 2128
Lsp1109I GCAGC 2 cut(s) 769, 1146
LweI GCATC 4 cut(s) 938, 1069, 1669, 1691
MaeI CTAG 3 cut(s) 474, 1502, 2117
MaeII ACGT 2 cut(s) 765, 1581
MaeIII GTNAC 3 cut(s) 134, 454, 881
MalI GATC 4 cut(s) 53, 500, 585, 1366
MbiI CCGCTC 1 cut(s) 1420
MboI GATC 4 cut(s) 51, 498, 583, 1364
MfeI CAATTG 2 cut(s) 330, 2030
MflI RGATCY 2 cut(s) 498, 1364
MhlI GDGCHC 1 cut(s) 414
MlyI GAGTC 4 cut(s) 94, 167, 281, 1512
MmeI TCCRAC 2 cut(s) 38, 415
Mph1103I ATGCAT 2 cut(s) 1684, 2016
MroXI GAANNNNTTC 3 cut(s) 175, 1595, 1779
MseI TTAA 8 cut(s) 536, 639, 1059, 1118, 1154, 1292, 1329, 1857
MspA1I CMGCKG 2 cut(s) 1325, 1574
MspI CCGG 1 cut(s) 1881
MspR9I CCNGG 8 cut(s) 419, 550, 1629, 1800, 1808, 1882, 1947, 1995
MunI CAATTG 2 cut(s) 330, 2030
Mva1269I GAATGC 1 cut(s) 516
MvaI CCWGG 7 cut(s) 419, 550, 1629, 1800, 1808, 1947, 1995
MvnI CGCG 1 cut(s) 1903
MwoI GCNNNNNNNGC 5 cut(s) 326, 712, 1265, 1700, 1989
NciI CCSGG 1 cut(s) 1882
NcoI CCATGG 1 cut(s) 336
NdeII GATC 4 cut(s) 51, 498, 583, 1364
NlaIV GGNNCC 2 cut(s) 172, 526
NmuCI GTSAC 2 cut(s) 134, 881
NsiI ATGCAT 2 cut(s) 1684, 2016
NspI RCATGY 5 cut(s) 111, 258, 1034, 1300, 2018
NspV TTCGAA 1 cut(s) 179
PaeI GCATGC 1 cut(s) 258
PceI AGGCCT 2 cut(s) 1248, 1771
PciI ACATGT 1 cut(s) 107
PctI GAATGC 1 cut(s) 516
PdmI GAANNNNTTC 3 cut(s) 175, 1595, 1779
PfeI GAWTC 4 cut(s) 8, 74, 181, 2167
PflMI CCANNNNNTGG 1 cut(s) 779
PkrI GCNGC 6 cut(s) 205, 759, 1161, 1669, 1805, 2088
PleI GAGTC 4 cut(s) 94, 166, 280, 1512
PmaCI CACGTG 1 cut(s) 1582
PmlI CACGTG 1 cut(s) 1582
PpsI GAGTC 4 cut(s) 94, 166, 280, 1512
Ppu21I YACGTR 1 cut(s) 1582
PscI ACATGT 1 cut(s) 107
PsiI TTATAA 1 cut(s) 995
Psp124BI GAGCTC 1 cut(s) 414
Psp6I CCWGG 7 cut(s) 417, 548, 1627, 1798, 1806, 1945, 1993
PspCI CACGTG 1 cut(s) 1582
PspFI CCCAGC 3 cut(s) 1397, 1842, 2131
PspGI CCWGG 7 cut(s) 417, 548, 1627, 1798, 1806, 1945, 1993
PspN4I GGNNCC 2 cut(s) 172, 526
PstI CTGCAG 2 cut(s) 316, 759
PstNI CAGNNNCTG 1 cut(s) 2131
PsuI RGATCY 2 cut(s) 498, 1364
PvuII CAGCTG 2 cut(s) 1325, 1574
RsaI GTAC 3 cut(s) 731, 1831, 2028
RsaNI GTAC 3 cut(s) 730, 1830, 2027
SacI GAGCTC 1 cut(s) 414
SaqAI TTAA 8 cut(s) 536, 639, 1059, 1118, 1154, 1292, 1329, 1857
SatI GCNGC 6 cut(s) 204, 758, 1160, 1668, 1804, 2087
Sau3AI GATC 4 cut(s) 51, 498, 583, 1364
SchI GAGTC 4 cut(s) 94, 167, 281, 1512
ScrFI CCNGG 8 cut(s) 419, 550, 1629, 1800, 1808, 1882, 1947, 1995
SduI GDGCHC 1 cut(s) 414
SfaNI GCATC 4 cut(s) 938, 1069, 1669, 1691
SfcI CTRYAG 2 cut(s) 312, 755
SfuI TTCGAA 1 cut(s) 179
SmlI CTYRAG 2 cut(s) 1655, 1739
SmoI CTYRAG 2 cut(s) 1655, 1739
SphI GCATGC 1 cut(s) 258
SseBI AGGCCT 2 cut(s) 1248, 1771
SsiI CCGC 8 cut(s) 203, 288, 320, 1420, 1556, 1667, 1804, 2086
SspMI CTAG 3 cut(s) 474, 1502, 2117
SstI GAGCTC 1 cut(s) 414
StuI AGGCCT 2 cut(s) 1248, 1771
StyD4I CCNGG 8 cut(s) 417, 548, 1627, 1798, 1806, 1880, 1945, 1993
StyI CCWWGG 2 cut(s) 150, 336
TaaI ACNGT 4 cut(s) 1312, 1896, 1940, 1964
TaiI ACGT 2 cut(s) 768, 1584
TaqI TCGA 7 cut(s) 103, 146, 179, 561, 742, 804, 1354
TatI WGTACW 2 cut(s) 729, 2026
TauI GCSGC 4 cut(s) 206, 1670, 1806, 2089
TfiI GAWTC 4 cut(s) 8, 74, 181, 2167
Tru1I TTAA 8 cut(s) 536, 639, 1059, 1118, 1154, 1292, 1329, 1857
Tru9I TTAA 8 cut(s) 536, 639, 1059, 1118, 1154, 1292, 1329, 1857
TscAI CASTG 4 cut(s) 139, 780, 1899, 1943
TseFI GTSAC 2 cut(s) 134, 881
TseI GCWGC 2 cut(s) 757, 1159
Tsp45I GTSAC 2 cut(s) 134, 881
TspGWI ACGGA 2 cut(s) 280, 991
TspRI CASTG 4 cut(s) 139, 780, 1899, 1943
Van91I CCANNNNNTGG 1 cut(s) 779
XagI CCTNNNNNAGG 1 cut(s) 1632
XapI RAATTY 6 cut(s) 218, 567, 832, 980, 1540, 1591
XceI RCATGY 5 cut(s) 111, 258, 1034, 1300, 2018
XcmI CCANNNNNNNNNTGG 1 cut(s) 1943
XmnI GAANNNNTTC 3 cut(s) 175, 1595, 1779
XspI CTAG 3 cut(s) 474, 1502, 2117
Zsp2I ATGCAT 2 cut(s) 1684, 2016
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.