pycom16g20030

Arginine

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Forward (+)
17547344 .. 17550327
2984 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g20030.3

Sequence Viewer

Length: 1686 bp
ATGTTGTGTCTCTGCCCACGGAGTTGTTTTCATTTGGGTCTTGGAAATAACTGGAATTTCAGGACTTGTGCAAGGCCAACCGCTTGTCTTTCCCAGTCCCAGGAAAGTGGGAATCTAGAGCCAATCAAGAAGCAAGATAAAATTAGTGGGATTGGAAAAACCAGGTCTGCCACGAAGGATCAGGTCGTCATTTCCAACTCTCAGGTTTCTCAGCAGGAGAGCTCCCCTCCACTGATTACTGCATTGAAGGCTTCAGCTGAACAAAGTGCTGCTACATTTCACTTCCCTGGGCACAACAGAGGTCGAGCTGCACCATCTTCTTTAACTAAGCTTATTGGCTTAAAACCATTTGTTCATGATTTGCCTGAGCTTCCTCATCTTGACGACCTCTTTTCCCCGAAAGGGCCCATTTTAGAAGCACAGCAACAGGCAGCCAGTCTCTTTGGGTCAACCGAGACATGGTTCCTTGTAGGAGGAACCACTTGTGGAATTCAGGCAGCAATTATGGCTACATGTTCCCCTGGAGATATTTTAATTCTCCCTCGCAATTCGCATATATCAGCCATATCTGCTATGATATTGTCCGGTGCAGTACCTAAGTACATCATCCCGCATTATAATTTTCACTGGGACATTGCTGGTGGGGTCACTCCATCACAGGTAGAGGCTGCAATCAAGGAAGTGGAGAAAGAAGGCCGAAAAGCAGCTGCAGTTTTGGTCACTTCCCCCACTTATCATGGTATATGCAGCAACGTGAGGGAGATAACCCAGTTGTGCCATTCTCATGGAATTCCTGTGATTGTTGATGAGGCTCATGGTGCACATCTAGGATTTCATCCCGAGATGCCATATTCGGCCATGCAGCAAGGTGCTGACCTAGCCGTGCAATCCACTCACAAGGTTCTCTGCTCTCTCACACAATCATCGATGTTGCATATGTCTGGGAGTATTGTAGATAGAGAAAGAATTTCAAGATGTCTTCAAACACTTCAAAGTAGTAGTCCTAGCTATCTGCTTCTGGCATCATTAGATGCTGCTAGAGCTCAAATTAGTGAAAATCCAGAAAATATTTTTGATAAAGCATTACAGTTGTCCATTGAAGTGAAGAATAAGATAAGAAAGATTTCAGGTATTTCAGTTCTCGACCATCAAGGCTTCCCTAATTTCCCTTCAACTGATCCCCTGCGGCTTACCATAGGATTCCAACAGCTTGGCTTGTCCGGTTATGAAGCCGATGAAATCTTGTACAACGATCATGAAATCATTTGTGAACTTGTTGAAACCCAATCCATTACTTTTGCACTTAACCTTGGAACCTGTAGAGAGCATGTCCAGAGGTTATTGTCGGGAATAAAGCACCTGGTGGCCGCTTCTGCATCAACTCAGGCTGTTAAAAGGAAAGTGGAAGGAGTTGGTGAGTCTGCAATCTTTGCAGAAATTGAAACAAGCTTAGTTCCTAGAGATGCCTTTTTTAGTGGTAAAAGAAGAGTGAGGGTTGAAAACAGCCTTGGAGAAATTTGTGGGGAGCTTATATGTCCATATCCGCCTGGGATTCCGGTAATAATCCCCGGGGAGACTATCACAAAGAAAGCTTTGGATTATCTGCGACATGTTAGAAGCAAAGGTGCTGTAATCAGTGGAGCTTCTGATCCCGAACTCGCTTCCATAGTTGTCTGCAGCAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

562

Amino Acids

60.54

Weight (kDa)

6.87

Isoelectric Point (pI)

46.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015592)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 618
AciI CCGC 5 cut(s) 81, 611, 1186, 1368, 1544
AclWI GGATC 3 cut(s) 186, 1172, 1643
AcoI YGGCCR 2 cut(s) 855, 1365
AcsI RAATTY 5 cut(s) 55, 489, 789, 966, 1515
AcuI CTGAAG 1 cut(s) 237
AdeI CACNNNGTG 1 cut(s) 1363
AfaI GTAC 3 cut(s) 594, 602, 1247
AfiI CCNNNNNNNGG 3 cut(s) 100, 402, 459
AflIII ACRYGT 2 cut(s) 512, 1609
AgsI TTSAA 9 cut(s) 247, 972, 983, 992, 1100, 1173, 1280, 1442, 1499
AjnI CCWGG 6 cut(s) 99, 161, 286, 520, 1359, 1546
AjuI GAANNNNNNNTTGG 2 cut(s) 1491, 1523
Alw21I GWGCWC 3 cut(s) 224, 823, 1045
Alw26I GTCTC 4 cut(s) 14, 443, 449, 1568
Alw44I GTGCAC 1 cut(s) 819
AlwI GGATC 3 cut(s) 186, 1172, 1643
Ama87I CYCGRG 2 cut(s) 839, 1568
AoxI GGCC 5 cut(s) 74, 404, 694, 855, 1365
ApaI GGGCCC 1 cut(s) 408
ApaLI GTGCAC 1 cut(s) 819
ApoI RAATTY 5 cut(s) 55, 489, 789, 966, 1515
ArsI GACNNNNNNTTYG 2 cut(s) 985, 1017
Asp700I GAANNNNTTC 1 cut(s) 1123
AspS9I GGNCC 2 cut(s) 404, 405
AsuC2I CCSGG 2 cut(s) 1569, 1570
AsuHPI GGTGA 1 cut(s) 1427
AvaI CYCGRG 2 cut(s) 839, 1568
BaeGI GKGCMC 3 cut(s) 294, 408, 823
BanII GRGCYC 3 cut(s) 224, 408, 1045
BbsI GAAGAC 1 cut(s) 971
Bbv12I GWGCWC 3 cut(s) 224, 823, 1045
BccI CCATC 3 cut(s) 322, 661, 1155
BceAI ACGGC 1 cut(s) 866
BciT130I CCWGG 6 cut(s) 101, 163, 288, 522, 1361, 1548
BcnI CCSGG 2 cut(s) 1569, 1570
BcoDI GTCTC 4 cut(s) 14, 443, 449, 1568
BfaI CTAG 6 cut(s) 116, 827, 878, 1005, 1038, 1458
BfmI CTRYAG 3 cut(s) 708, 1318, 1675
Bme1390I CCNGG 8 cut(s) 101, 163, 288, 522, 1361, 1548, 1569, 1570
BmeT110I CYCGRG 2 cut(s) 839, 1568
BmgT120I GGNCC 2 cut(s) 404, 405
BmiI GGNNCC 4 cut(s) 406, 464, 478, 1315
BmrFI CCNGG 8 cut(s) 101, 163, 288, 522, 1361, 1548, 1569, 1570
BmrI ACTGGG 3 cut(s) 88, 637, 763
BmsI GCATC 5 cut(s) 834, 1021, 1031, 1385, 1453
BmuI ACTGGG 3 cut(s) 88, 637, 763
BpiI GAAGAC 1 cut(s) 971
BplI GAGNNNNNCTC 2 cut(s) 211, 243
BpmI CTGGAG 1 cut(s) 543
Bpu10I CCTNAGC 1 cut(s) 366
BpuMI CCSGG 2 cut(s) 1569, 1570
Bsa29I ATCGAT 1 cut(s) 926
BsaWI WCCGGW 3 cut(s) 584, 1220, 1555
Bsc4I CCNNNNNNNGG 3 cut(s) 100, 402, 459
Bse1I ACTGG 5 cut(s) 56, 94, 435, 632, 769
Bse3DI GCAATG 1 cut(s) 633
BseBI CCWGG 6 cut(s) 101, 163, 288, 522, 1361, 1548
BseCI ATCGAT 1 cut(s) 926
BseGI GGATG 2 cut(s) 606, 835
BseLI CCNNNNNNNGG 3 cut(s) 100, 402, 459
BseMI GCAATG 1 cut(s) 633
BseMII CTCAG 4 cut(s) 215, 224, 357, 1397
BseNI ACTGG 5 cut(s) 56, 94, 435, 632, 769
BseSI GKGCMC 3 cut(s) 294, 408, 823
BsgI GTGCAG 2 cut(s) 294, 609
BshFI GGCC 5 cut(s) 76, 406, 696, 857, 1367
BshVI ATCGAT 1 cut(s) 926
BsiHKAI GWGCWC 3 cut(s) 224, 823, 1045
BsiHKCI CYCGRG 2 cut(s) 839, 1568
BsiSI CCGG 4 cut(s) 585, 1221, 1556, 1569
BslFI GGGAC 2 cut(s) 82, 644
BslI CCNNNNNNNGG 3 cut(s) 100, 402, 459
BsmAI GTCTC 4 cut(s) 14, 443, 449, 1568
BsmFI GGGAC 2 cut(s) 82, 644
BsnI GGCC 5 cut(s) 76, 406, 696, 857, 1367
BsoBI CYCGRG 2 cut(s) 839, 1568
Bsp120I GGGCCC 1 cut(s) 404
Bsp1286I GDGCHC 5 cut(s) 224, 294, 408, 823, 1045
Bsp1407I TGTACA 1 cut(s) 1245
Bsp143I GATC 4 cut(s) 178, 1177, 1252, 1648
BspACI CCGC 5 cut(s) 81, 611, 1186, 1368, 1544
BspANI GGCC 5 cut(s) 76, 406, 696, 857, 1367
BspCNI CTCAG 4 cut(s) 214, 223, 358, 1396
BspDI ATCGAT 1 cut(s) 926
BspHI TCATGA 2 cut(s) 355, 1255
BspLI GGNNCC 4 cut(s) 406, 464, 478, 1315
BspMAI CTGCAG 2 cut(s) 712, 1679
BspPI GGATC 3 cut(s) 186, 1172, 1643
BsrDI GCAATG 1 cut(s) 633
BsrGI TGTACA 1 cut(s) 1245
BsrI ACTGG 5 cut(s) 56, 94, 435, 632, 769
BssMI GATC 4 cut(s) 178, 1177, 1252, 1648
BssT1I CCWWGG 2 cut(s) 1309, 1507
Bst2UI CCWGG 6 cut(s) 101, 163, 288, 522, 1361, 1548
Bst4CI ACNGT 1 cut(s) 1089
Bst6I CTCTTC 1 cut(s) 1480
BstAPI GCANNNNNTGC 1 cut(s) 1430
BstAUI TGTACA 1 cut(s) 1245
BstDEI CTNAG 7 cut(s) 201, 210, 327, 366, 597, 1383, 1450
BstDSI CCRYGG 1 cut(s) 17
BstF5I GGATG 2 cut(s) 606, 835
BstKTI GATC 4 cut(s) 181, 1180, 1255, 1651
BstMAI GTCTC 4 cut(s) 14, 443, 449, 1568
BstMBI GATC 4 cut(s) 178, 1177, 1252, 1648
BstMWI GCNNNNNNNGC 8 cut(s) 248, 506, 569, 818, 878, 1040, 1373, 1430
BstNI CCWGG 6 cut(s) 101, 163, 288, 522, 1361, 1548
BstNSI RCATGY 3 cut(s) 516, 1331, 1613
BstSCI CCNGG 8 cut(s) 99, 161, 286, 520, 1359, 1546, 1567, 1568
BstSFI CTRYAG 3 cut(s) 708, 1318, 1675
BstSLI GKGCMC 3 cut(s) 294, 408, 823
BstV2I GAAGAC 1 cut(s) 971
BstXI CCANNNNNNTGG 3 cut(s) 107, 785, 1211
Bsu15I ATCGAT 1 cut(s) 926
BsuRI GGCC 5 cut(s) 76, 406, 696, 857, 1367
BsuTUI ATCGAT 1 cut(s) 926
BtgI CCRYGG 1 cut(s) 17
BtsCI GGATG 2 cut(s) 606, 835
BtsIMutI CAGTG 3 cut(s) 230, 625, 1642
CciI TCATGA 2 cut(s) 355, 1255
Cfr13I GGNCC 2 cut(s) 404, 405
Cfr9I CCCGGG 1 cut(s) 1568
ClaI ATCGAT 1 cut(s) 926
CsiI ACCWGGT 2 cut(s) 161, 1359
Csp6I GTAC 3 cut(s) 593, 601, 1246
CviQI GTAC 3 cut(s) 593, 601, 1246
DdeI CTNAG 7 cut(s) 201, 210, 327, 366, 597, 1383, 1450
DpnI GATC 4 cut(s) 180, 1179, 1254, 1650
DpnII GATC 4 cut(s) 178, 1177, 1252, 1648
DraIII CACNNNGTG 1 cut(s) 1363
EaeI YGGCCR 2 cut(s) 855, 1365
Eam1104I CTCTTC 1 cut(s) 1480
EarI CTCTTC 1 cut(s) 1480
EciI GGCGGA 1 cut(s) 1533
Ecl136II GAGCTC 2 cut(s) 222, 1043
Eco130I CCWWGG 2 cut(s) 1309, 1507
Eco24I GRGCYC 3 cut(s) 224, 408, 1045
Eco53kI GAGCTC 2 cut(s) 222, 1043
Eco57I CTGAAG 1 cut(s) 237
Eco88I CYCGRG 2 cut(s) 839, 1568
EcoICRI GAGCTC 2 cut(s) 222, 1043
EcoO109I RGGNCCY 1 cut(s) 404
EcoRI GAATTC 2 cut(s) 489, 789
EcoRII CCWGG 6 cut(s) 99, 161, 286, 520, 1359, 1546
EcoT14I CCWWGG 2 cut(s) 1309, 1507
EcoT38I GRGCYC 3 cut(s) 224, 408, 1045
ErhI CCWWGG 2 cut(s) 1309, 1507
FaqI GGGAC 2 cut(s) 82, 644
FauI CCCGC 1 cut(s) 618
FauNDI CATATG 1 cut(s) 936
FokI GGATG 2 cut(s) 593, 822
FriOI GRGCYC 3 cut(s) 224, 408, 1045
FspBI CTAG 6 cut(s) 116, 827, 878, 1005, 1038, 1458
GsuI CTGGAG 1 cut(s) 543
HaeIII GGCC 5 cut(s) 76, 406, 696, 857, 1367
HapII CCGG 4 cut(s) 585, 1221, 1556, 1569
HincII GTYRAC 1 cut(s) 450
HindII GTYRAC 1 cut(s) 450
HindIII AAGCTT 3 cut(s) 329, 1447, 1590
HinfI GANTC 4 cut(s) 112, 1200, 1418, 1552
HpaII CCGG 4 cut(s) 585, 1221, 1556, 1569
HphI GGTGA 1 cut(s) 1427
Hpy166II GTNNAC 3 cut(s) 450, 821, 1271
Hpy188I TCNGA 1 cut(s) 1648
Hpy8I GTNNAC 3 cut(s) 450, 821, 1271
HpyAV CCTTC 5 cut(s) 169, 241, 686, 1179, 1400
HpyCH4III ACNGT 1 cut(s) 1089
HpyCH4IV ACGT 1 cut(s) 753
HpyF10VI GCNNNNNNNGC 8 cut(s) 248, 506, 569, 818, 878, 1040, 1373, 1430
HpyF3I CTNAG 7 cut(s) 201, 210, 327, 366, 597, 1383, 1450
HpySE526I ACGT 1 cut(s) 753
Kzo9I GATC 4 cut(s) 178, 1177, 1252, 1648
LmnI GCTCC 3 cut(s) 227, 1525, 1640
LweI GCATC 5 cut(s) 834, 1021, 1031, 1385, 1453
MabI ACCWGGT 2 cut(s) 161, 1359
MaeI CTAG 6 cut(s) 116, 827, 878, 1005, 1038, 1458
MaeII ACGT 1 cut(s) 753
MaeIII GTNAC 2 cut(s) 646, 718
MalI GATC 4 cut(s) 180, 1179, 1254, 1650
MboI GATC 4 cut(s) 178, 1177, 1252, 1648
MboII GAAGA 4 cut(s) 309, 971, 1117, 1497
MhlI GDGCHC 5 cut(s) 224, 294, 408, 823, 1045
MlyI GAGTC 1 cut(s) 1427
MmeI TCCRAC 2 cut(s) 219, 1228
MroXI GAANNNNTTC 1 cut(s) 1123
MseI TTAA 5 cut(s) 323, 341, 533, 1305, 1392
MslI CAYNNNNRTG 2 cut(s) 783, 1100
MspA1I CMGCKG 2 cut(s) 257, 707
MspI CCGG 4 cut(s) 585, 1221, 1556, 1569
MspR9I CCNGG 8 cut(s) 101, 163, 288, 522, 1361, 1548, 1569, 1570
MvaI CCWGG 6 cut(s) 101, 163, 288, 522, 1361, 1548
MwoI GCNNNNNNNGC 8 cut(s) 248, 506, 569, 818, 878, 1040, 1373, 1430
NciI CCSGG 2 cut(s) 1569, 1570
NdeI CATATG 1 cut(s) 936
NdeII GATC 4 cut(s) 178, 1177, 1252, 1648
NlaIV GGNNCC 4 cut(s) 406, 464, 478, 1315
NmuCI GTSAC 2 cut(s) 646, 718
NspI RCATGY 3 cut(s) 516, 1331, 1613
PagI TCATGA 2 cut(s) 355, 1255
PasI CCCWGGG 1 cut(s) 287
PciI ACATGT 2 cut(s) 512, 1609
PdmI GAANNNNTTC 1 cut(s) 1123
PfeI GAWTC 3 cut(s) 112, 1200, 1552
PleI GAGTC 1 cut(s) 1426
PpsI GAGTC 1 cut(s) 1426
PscI ACATGT 2 cut(s) 512, 1609
PsiI TTATAA 1 cut(s) 618
Psp124BI GAGCTC 2 cut(s) 224, 1045
Psp6I CCWGG 6 cut(s) 99, 161, 286, 520, 1359, 1546
PspGI CCWGG 6 cut(s) 99, 161, 286, 520, 1359, 1546
PspN4I GGNNCC 4 cut(s) 406, 464, 478, 1315
PspOMI GGGCCC 1 cut(s) 404
PspPI GGNCC 2 cut(s) 404, 405
PstI CTGCAG 2 cut(s) 712, 1679
PvuII CAGCTG 2 cut(s) 257, 707
RsaI GTAC 3 cut(s) 594, 602, 1247
RsaNI GTAC 3 cut(s) 593, 601, 1246
RseI CAYNNNNRTG 2 cut(s) 783, 1100
SacI GAGCTC 2 cut(s) 224, 1045
SaqAI TTAA 5 cut(s) 323, 341, 533, 1305, 1392
Sau3AI GATC 4 cut(s) 178, 1177, 1252, 1648
Sau96I GGNCC 2 cut(s) 404, 405
SchI GAGTC 1 cut(s) 1427
ScrFI CCNGG 8 cut(s) 101, 163, 288, 522, 1361, 1548, 1569, 1570
SduI GDGCHC 5 cut(s) 224, 294, 408, 823, 1045
SexAI ACCWGGT 2 cut(s) 161, 1359
SfaNI GCATC 5 cut(s) 834, 1021, 1031, 1385, 1453
SfcI CTRYAG 3 cut(s) 708, 1318, 1675
SmaI CCCGGG 1 cut(s) 1570
SmiMI CAYNNNNRTG 2 cut(s) 783, 1100
SsiI CCGC 5 cut(s) 81, 611, 1186, 1368, 1544
SspI AATATT 1 cut(s) 1069
SspMI CTAG 6 cut(s) 116, 827, 878, 1005, 1038, 1458
SstI GAGCTC 2 cut(s) 224, 1045
StyD4I CCNGG 8 cut(s) 99, 161, 286, 520, 1359, 1546, 1567, 1568
StyI CCWWGG 2 cut(s) 1309, 1507
TaaI ACNGT 1 cut(s) 1089
TaiI ACGT 1 cut(s) 756
TaqI TCGA 3 cut(s) 304, 926, 1143
TatI WGTACW 2 cut(s) 600, 1245
TauI GCSGC 2 cut(s) 1189, 1370
TfiI GAWTC 3 cut(s) 112, 1200, 1552
Tru1I TTAA 5 cut(s) 323, 341, 533, 1305, 1392
Tru9I TTAA 5 cut(s) 323, 341, 533, 1305, 1392
TscAI CASTG 3 cut(s) 237, 632, 1642
TseFI GTSAC 2 cut(s) 646, 718
Tsp45I GTSAC 2 cut(s) 646, 718
TspDTI ATGAA 6 cut(s) 20, 344, 824, 1242, 1251, 1272
TspGWI ACGGA 1 cut(s) 34
TspMI CCCGGG 1 cut(s) 1568
TspRI CASTG 3 cut(s) 237, 632, 1642
VneI GTGCAC 1 cut(s) 819
XapI RAATTY 5 cut(s) 55, 489, 789, 966, 1515
XbaI TCTAGA 1 cut(s) 115
XceI RCATGY 3 cut(s) 516, 1331, 1613
XmaI CCCGGG 1 cut(s) 1568
XmnI GAANNNNTTC 1 cut(s) 1123
XspI CTAG 6 cut(s) 116, 827, 878, 1005, 1038, 1458
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.