Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0011920

Physical Location & Seq

Genomic Coordinates Reverse (-)

148284 .. 149023

Gene Structure 740 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 633 bp

ATGGAATTGGAAGGAATCAGTAAGAAAGAGAAAGAAGAAAGCGGCGGCGGCGGAGGAGGAGGGGGTGAGATTGAGAAGGTAAATTTGTCGTCGGCGGCGGCGTCGGAGATAGAGTACGTGAGCTATGGAGGAGAAGAGCACCTGCCTCTAATAATGGGGCTGGTGGACCAAGAACTGAGCGAGCCGTACTCCATCTTCACCTATCGGTACTTCGTGTATCTGTGGCCGCAGCTATGTTTCATGGCGTTCCACGGAGGCAGGTGCGTGGGGACGGTGGTGTGTAAGATGGGGGAGCACCGCAACACCTACAGAGGGTACATCGCCATGCTCGTCGTCATCAAGCCGTACAGAGGCAAAGGCATCGCCACCCAACTAGTCACCAGATCTATTCAAGTCATGAAGGAATCTGGCTGCGAAGAGGTAACGCTGGAGGCAGAAGTGACAAATAAAGGAGCTCTGGCGCTGTACGGGCGTCTTGGATTTATACGGGCAAAGAGGCTATTCCGGTACTACTTGAACGGGGTGGATGCTTTTCGTCTGAAGCTGCTGTTTCCCCGCCCTCTTTACTCTCTTCCTTCCCAATCCCAGGCTAATAATGACAACATGGCCATGCCATTGCCCATGGAAGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004596 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006473 GO:0006474 GO:0006807 GO:0008080 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016407 GO:0016410 GO:0016740 GO:0016746 GO:0016747 GO:0019538 GO:0031248 GO:0031365 GO:0031414 GO:0031417 GO:0032991 GO:0034212 GO:0036211 GO:0043170 GO:0043412 GO:0043543 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0051604 GO:0071704 GO:1901564 GO:1902493 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Acetyltransf_1

Protein Analysis

211

Amino Acids

23.42

Weight (kDa)

6.34

Isoelectric Point (pI)

36.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Acetyltransf_1	PF00583	57 - 161	1.2e-21	Acetyltransferase (GNAT) family
Acetyltransf_7	PF13508	78 - 162	1.4e-11	Acetyltransferase (GNAT) domain
Acetyltransf_10	PF13673	78 - 167	5.8e-10	Acetyltransferase (GNAT) domain
FR47	PF08445	101 - 164	2.6e-06	FR47-like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011920)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38130 AT2G38130
fragaria_vesca	FvH4_6g54330
malus_domestica	MD09G1002300.v1.1
prunus_persica	Prupe.3G313900_v2.0.a1
pyrus_communis	pycom111g00180 pycom17g00210
rosa_chinensis	RchiOBHm_Chr2g0176551
rosa_laevigata	RLG00000022422
rosa_multiflora	Rmu_co8099318.1_g000001 Rmu_sc0001417.1_g000008 Rmu_sc0011904.1_g000003
rosa_roxburghii	Rroxscaffold_2G00076310
rosa_rugosa	Rorug02G0596100
rosa_samantha	Rh2AG673900 Rh2BG685100 Rh2CG648100 Rh2DG699000
rosa_wichuraiana	Rw2G055280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	150, 249
Acc36I	ACCTGC	2 cut(s)	150, 249
AciI	CCGC	9 cut(s)	42, 45, 48, 51, 95, 98, 227, 298, 556
AcoI	YGGCCR	2 cut(s)	224, 606
AcsI	RAATTY	1 cut(s)	82
AcuI	CTGAAG	1 cut(s)	560
AcyI	GRCGYC	2 cut(s)	101, 472
AfaI	GTAC	7 cut(s)	116, 188, 209, 317, 347, 467, 509
AfiI	CCNNNNNNNGG	3 cut(s)	312, 350, 586
AgsI	TTSAA	2 cut(s)	392, 517
AhlI	ACTAGT	1 cut(s)	373
AjnI	CCWGG	1 cut(s)	585
AluBI	AGCT	4 cut(s)	123, 232, 455, 544
AluI	AGCT	4 cut(s)	123, 232, 455, 544
Alw21I	GWGCWC	3 cut(s)	141, 297, 457
AoxI	GGCC	2 cut(s)	224, 606
ApeKI	GCWGC	3 cut(s)	229, 411, 544
ApoI	RAATTY	1 cut(s)	82
AspLEI	GCGC	1 cut(s)	463
AspS9I	GGNCC	1 cut(s)	166
AsuHPI	GGTGA	3 cut(s)	77, 190, 370
AvaII	GGWCC	1 cut(s)	166
BalI	TGGCCA	1 cut(s)	608
BanII	GRGCYC	1 cut(s)	457
BarI	GAAGNNNNNNTAC	2 cut(s)	179, 211
Bbv12I	GWGCWC	3 cut(s)	141, 297, 457
BbvI	GCAGC	3 cut(s)	241, 398, 531
BccI	CCATC	2 cut(s)	200, 280
BceAI	ACGGC	2 cut(s)	169, 328
BcgI	CGANNNNNNTGC	2 cut(s)	343, 377
BciT130I	CCWGG	1 cut(s)	587
BcuI	ACTAGT	1 cut(s)	373
BfaI	CTAG	1 cut(s)	374
BfmI	CTRYAG	1 cut(s)	307
BfoI	RGCGCY	1 cut(s)	464
BfuAI	ACCTGC	2 cut(s)	150, 249
BglII	AGATCT	1 cut(s)	383
BisI	GCNGC	9 cut(s)	43, 46, 49, 96, 99, 227, 230, 412, 545
BlsI	GCNGC	9 cut(s)	44, 47, 50, 97, 100, 228, 231, 413, 546
Bme1390I	CCNGG	1 cut(s)	587
Bme18I	GGWCC	1 cut(s)	166
BmgT120I	GGNCC	1 cut(s)	166
BmrFI	CCNGG	1 cut(s)	587
BmsI	GCATC	2 cut(s)	369, 517
BplI	GAGNNNNNCTC	2 cut(s)	173, 205
BpmI	CTGGAG	1 cut(s)	449
BsaAI	YACGTR	1 cut(s)	118
BsaHI	GRCGYC	2 cut(s)	101, 472
BsaJI	CCNNGG	3 cut(s)	250, 585, 621
BsaWI	WCCGGW	1 cut(s)	504
BsaXI	ACNNNNNCTCC	2 cut(s)	98, 128
Bsc4I	CCNNNNNNNGG	3 cut(s)	312, 350, 586
Bse3DI	GCAATG	1 cut(s)	614
BseBI	CCWGG	1 cut(s)	587
BseDI	CCNNGG	3 cut(s)	250, 585, 621
BseGI	GGATG	1 cut(s)	532
BseLI	CCNNNNNNNGG	3 cut(s)	312, 350, 586
BseMI	GCAATG	1 cut(s)	614
BseMII	CTCAG	1 cut(s)	167
BseRI	GAGGAG	3 cut(s)	69, 72, 144
BseXI	GCAGC	3 cut(s)	241, 398, 531
BshFI	GGCC	2 cut(s)	226, 608
BsiHKAI	GWGCWC	3 cut(s)	141, 297, 457
BsiSI	CCGG	1 cut(s)	505
BslFI	GGGAC	1 cut(s)	283
BslI	CCNNNNNNNGG	3 cut(s)	312, 350, 586
BsmFI	GGGAC	1 cut(s)	283
BsnI	GGCC	2 cut(s)	226, 608
Bsp1286I	GDGCHC	3 cut(s)	141, 297, 457
Bsp143I	GATC	1 cut(s)	383
Bsp19I	CCATGG	1 cut(s)	621
BspACI	CCGC	9 cut(s)	42, 45, 48, 51, 95, 98, 227, 298, 556
BspANI	GGCC	2 cut(s)	226, 608
BspCNI	CTCAG	1 cut(s)	168
BspHI	TCATGA	1 cut(s)	396
BspMI	ACCTGC	2 cut(s)	150, 249
BspQI	GCTCTTC	1 cut(s)	129
BsrDI	GCAATG	1 cut(s)	614
BssECI	CCNNGG	3 cut(s)	250, 585, 621
BssMI	GATC	1 cut(s)	383
BssNI	GRCGYC	2 cut(s)	101, 472
BssT1I	CCWWGG	1 cut(s)	621
Bst2UI	CCWGG	1 cut(s)	587
Bst4CI	ACNGT	1 cut(s)	274
Bst6I	CTCTTC	3 cut(s)	129, 411, 576
BstACI	GRCGYC	2 cut(s)	101, 472
BstBAI	YACGTR	1 cut(s)	118
BstC8I	GCNNGC	1 cut(s)	182
BstDEI	CTNAG	1 cut(s)	176
BstDSI	CCRYGG	2 cut(s)	250, 621
BstF5I	GGATG	1 cut(s)	532
BstH2I	RGCGCY	1 cut(s)	464
BstHHI	GCGC	1 cut(s)	463
BstKTI	GATC	1 cut(s)	386
BstMBI	GATC	1 cut(s)	383
BstMWI	GCNNNNNNNGC	2 cut(s)	48, 469
BstNI	CCWGG	1 cut(s)	587
BstSCI	CCNGG	1 cut(s)	585
BstSFI	CTRYAG	1 cut(s)	307
BstV1I	GCAGC	3 cut(s)	241, 398, 531
BstX2I	RGATCY	1 cut(s)	383
BstYI	RGATCY	1 cut(s)	383
BsuRI	GGCC	2 cut(s)	226, 608
BtgI	CCRYGG	2 cut(s)	250, 621
BtgZI	GCGATG	2 cut(s)	304, 346
BtsCI	GGATG	1 cut(s)	532
BveI	ACCTGC	2 cut(s)	150, 249
Cac8I	GCNNGC	1 cut(s)	182
CciI	TCATGA	1 cut(s)	396
CfoI	GCGC	1 cut(s)	463
Cfr13I	GGNCC	1 cut(s)	166
CseI	GACGC	2 cut(s)	90, 461
Csp6I	GTAC	7 cut(s)	115, 187, 208, 316, 346, 466, 508
CviAII	CATG	6 cut(s)	241, 325, 397, 604, 610, 622
CviQI	GTAC	7 cut(s)	115, 187, 208, 316, 346, 466, 508
DdeI	CTNAG	1 cut(s)	176
DpnI	GATC	1 cut(s)	385
DpnII	GATC	1 cut(s)	383
EaeI	YGGCCR	2 cut(s)	224, 606
Eam1104I	CTCTTC	3 cut(s)	129, 411, 576
EarI	CTCTTC	3 cut(s)	129, 411, 576
EciI	GGCGGA	1 cut(s)	66
Ecl136II	GAGCTC	1 cut(s)	455
Eco130I	CCWWGG	1 cut(s)	621
Eco24I	GRGCYC	1 cut(s)	457
Eco47I	GGWCC	1 cut(s)	166
Eco53kI	GAGCTC	1 cut(s)	455
Eco57I	CTGAAG	1 cut(s)	560
EcoICRI	GAGCTC	1 cut(s)	455
EcoRII	CCWGG	1 cut(s)	585
EcoT14I	CCWWGG	1 cut(s)	621
EcoT38I	GRGCYC	1 cut(s)	457
ErhI	CCWWGG	1 cut(s)	621
FaeI	CATG	6 cut(s)	244, 328, 400, 607, 613, 625
FaiI	YATR	9 cut(s)	126, 235, 242, 326, 398, 485, 605, 611, 623
FaqI	GGGAC	1 cut(s)	283
FatI	CATG	6 cut(s)	240, 324, 396, 603, 609, 621
FauI	CCCGC	1 cut(s)	563
Fnu4HI	GCNGC	9 cut(s)	43, 46, 49, 96, 99, 227, 230, 412, 545
FokI	GGATG	1 cut(s)	539
FriOI	GRGCYC	1 cut(s)	457
Fsp4HI	GCNGC	9 cut(s)	43, 46, 49, 96, 99, 227, 230, 412, 545
FspBI	CTAG	1 cut(s)	374
GlaI	GCGC	1 cut(s)	462
GluI	GCNGC	9 cut(s)	43, 46, 49, 96, 99, 227, 230, 412, 545
GsuI	CTGGAG	1 cut(s)	449
HaeII	RGCGCY	1 cut(s)	464
HaeIII	GGCC	2 cut(s)	226, 608
HapII	CCGG	1 cut(s)	505
HgaI	GACGC	2 cut(s)	90, 461
HhaI	GCGC	1 cut(s)	463
Hin1I	GRCGYC	2 cut(s)	101, 472
Hin1II	CATG	6 cut(s)	244, 328, 400, 607, 613, 625
Hin6I	GCGC	1 cut(s)	461
HinP1I	GCGC	1 cut(s)	461
HinfI	GANTC	2 cut(s)	15, 404
HpaII	CCGG	1 cut(s)	505
HphI	GGTGA	3 cut(s)	77, 190, 370
Hpy166II	GTNNAC	1 cut(s)	166
Hpy188I	TCNGA	2 cut(s)	106, 540
Hpy188III	TCNNGA	1 cut(s)	397
Hpy8I	GTNNAC	1 cut(s)	166
Hpy99I	CGWCG	3 cut(s)	94, 106, 335
HpyAV	CCTTC	4 cut(s)	5, 70, 394, 585
HpyCH4III	ACNGT	1 cut(s)	274
HpyCH4IV	ACGT	1 cut(s)	117
HpyF10VI	GCNNNNNNNGC	2 cut(s)	48, 469
HpyF3I	CTNAG	1 cut(s)	176
HpySE526I	ACGT	1 cut(s)	117
Hsp92I	GRCGYC	2 cut(s)	101, 472
Hsp92II	CATG	6 cut(s)	244, 328, 400, 607, 613, 625
HspAI	GCGC	1 cut(s)	461
Kzo9I	GATC	1 cut(s)	383
LguI	GCTCTTC	1 cut(s)	129
LmnI	GCTCC	2 cut(s)	292, 452
Lsp1109I	GCAGC	3 cut(s)	241, 398, 531
LweI	GCATC	2 cut(s)	369, 517
MaeI	CTAG	1 cut(s)	374
MaeII	ACGT	1 cut(s)	117
MaeIII	GTNAC	3 cut(s)	376, 421, 439
MalI	GATC	1 cut(s)	385
MboI	GATC	1 cut(s)	383
MboII	GAAGA	5 cut(s)	47, 146, 187, 428, 563
MflI	RGATCY	1 cut(s)	383
MhlI	GDGCHC	3 cut(s)	141, 297, 457
MlsI	TGGCCA	1 cut(s)	608
MluCI	AATT	2 cut(s)	5, 82
MluNI	TGGCCA	1 cut(s)	608
MmeI	TCCRAC	1 cut(s)	84
Mox20I	TGGCCA	1 cut(s)	608
MscI	TGGCCA	1 cut(s)	608
MslI	CAYNNNNRTG	2 cut(s)	323, 608
Msp20I	TGGCCA	1 cut(s)	608
MspI	CCGG	1 cut(s)	505
MspR9I	CCNGG	1 cut(s)	587
MvaI	CCWGG	1 cut(s)	587
MwoI	GCNNNNNNNGC	2 cut(s)	48, 469
NcoI	CCATGG	1 cut(s)	621
NdeII	GATC	1 cut(s)	383
NlaIII	CATG	6 cut(s)	244, 328, 400, 607, 613, 625
NmuCI	GTSAC	2 cut(s)	376, 439
PagI	TCATGA	1 cut(s)	396
PaqCI	CACCTGC	2 cut(s)	150, 249
PciSI	GCTCTTC	1 cut(s)	129
PcsI	WCGNNNNNNNCGW	2 cut(s)	98, 327
PfeI	GAWTC	2 cut(s)	15, 404
PkrI	GCNGC	9 cut(s)	44, 47, 50, 97, 100, 228, 231, 413, 546
Ppu21I	YACGTR	1 cut(s)	118
Psp124BI	GAGCTC	1 cut(s)	457
Psp6I	CCWGG	1 cut(s)	585
PspGI	CCWGG	1 cut(s)	585
PspPI	GGNCC	1 cut(s)	166
PsuI	RGATCY	1 cut(s)	383
RsaI	GTAC	7 cut(s)	116, 188, 209, 317, 347, 467, 509
RsaNI	GTAC	7 cut(s)	115, 187, 208, 316, 346, 466, 508
RseI	CAYNNNNRTG	2 cut(s)	323, 608
SacI	GAGCTC	1 cut(s)	457
SapI	GCTCTTC	1 cut(s)	129
SatI	GCNGC	9 cut(s)	43, 46, 49, 96, 99, 227, 230, 412, 545
Sau3AI	GATC	1 cut(s)	383
Sau96I	GGNCC	1 cut(s)	166
ScrFI	CCNGG	1 cut(s)	587
SduI	GDGCHC	3 cut(s)	141, 297, 457
SfaNI	GCATC	2 cut(s)	369, 517
SfcI	CTRYAG	1 cut(s)	307
SinI	GGWCC	1 cut(s)	166
SmiMI	CAYNNNNRTG	2 cut(s)	323, 608
SpeI	ACTAGT	1 cut(s)	373
Sse9I	AATT	2 cut(s)	5, 82
SsiI	CCGC	9 cut(s)	42, 45, 48, 51, 95, 98, 227, 298, 556
SspMI	CTAG	1 cut(s)	374
SstI	GAGCTC	1 cut(s)	457
StyD4I	CCNGG	1 cut(s)	585
StyI	CCWWGG	1 cut(s)	621
TaaI	ACNGT	1 cut(s)	274
TaiI	ACGT	1 cut(s)	120
TasI	AATT	2 cut(s)	5, 82
TauI	GCSGC	6 cut(s)	45, 48, 51, 98, 101, 229
TfiI	GAWTC	2 cut(s)	15, 404
TseFI	GTSAC	2 cut(s)	376, 439
TseI	GCWGC	3 cut(s)	229, 411, 544
Tsp45I	GTSAC	2 cut(s)	376, 439
TspDTI	ATGAA	2 cut(s)	229, 413
TspGWI	ACGGA	1 cut(s)	267
VpaK11BI	GGWCC	1 cut(s)	166
XapI	RAATTY	1 cut(s)	82
XspI	CTAG	1 cut(s)	374

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.