Isocitrate dehydrogenase NADP
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G14590 |
| fragaria_vesca | FvH4_6g51040 FvH4_6g51040 FvH4_6g51040 |
| malus_domestica | MD09G1029200.v1.1 MD17G1031300.v1.1 |
| prunus_persica | Prupe.3G288200_v2.0.a1 Prupe.3G288200_v2.0.a1 Prupe.3G288200_v2.0.a1 |
| pyrus_communis | pycom111g02330 pycom17g02880 |
| rosa_chinensis | RchiOBHm_Chr2g0172581 RchiOBHm_Chr3g0476461 |
| rosa_laevigata | RLG00000022118 |
| rosa_multiflora | Rmu_sc0000912.1_g000003 Rmu_ssc0000245.1_g000018 |
| rosa_roxburghii | Rroxscaffold_2G00079740 |
| rosa_rugosa | Rorug02G0560000 |
| rosa_samantha | Rh2AG636200 Rh2BG649600 Rh2DG663900 |
| rosa_wichuraiana | Rw2G052640 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 723 |
| Acc36I | ACCTGC | 1 cut(s) | 864 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 822 |
| AccBSI | CCGCTC | 1 cut(s) | 404 |
| AccII | CGCG | 4 cut(s) | 13, 19, 77, 150 |
| AclI | AACGTT | 1 cut(s) | 417 |
| AclWI | GGATC | 2 cut(s) | 1341, 1342 |
| AcoI | YGGCCR | 3 cut(s) | 14, 78, 824 |
| AcsI | RAATTY | 3 cut(s) | 467, 934, 1394 |
| AcuI | CTGAAG | 3 cut(s) | 154, 417, 1146 |
| AfaI | GTAC | 2 cut(s) | 529, 1189 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 692, 822 |
| AflII | CTTAAG | 1 cut(s) | 407 |
| AgsI | TTSAA | 6 cut(s) | 127, 355, 730, 929, 1206, 1384 |
| AjnI | CCWGG | 3 cut(s) | 577, 658, 736 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 137, 169 |
| AluBI | AGCT | 4 cut(s) | 782, 1124, 1133, 1432 |
| AluI | AGCT | 4 cut(s) | 782, 1124, 1133, 1432 |
| Alw21I | GWGCWC | 1 cut(s) | 842 |
| Alw26I | GTCTC | 4 cut(s) | 81, 157, 446, 1298 |
| AlwI | GGATC | 2 cut(s) | 1341, 1342 |
| Ama87I | CYCGRG | 1 cut(s) | 115 |
| AoxI | GGCC | 8 cut(s) | 14, 78, 734, 744, 824, 1075, 1225, 1354 |
| ApeKI | GCWGC | 3 cut(s) | 184, 1130, 1292 |
| ApoI | RAATTY | 3 cut(s) | 467, 934, 1394 |
| AspLEI | GCGC | 3 cut(s) | 13, 29, 434 |
| AspS9I | GGNCC | 5 cut(s) | 656, 734, 745, 1075, 1355 |
| AsuHPI | GGTGA | 1 cut(s) | 266 |
| AvaI | CYCGRG | 1 cut(s) | 115 |
| AvaII | GGWCC | 1 cut(s) | 656 |
| BaeGI | GKGCMC | 1 cut(s) | 41 |
| BauI | CACGAG | 1 cut(s) | 1221 |
| Bbv12I | GWGCWC | 1 cut(s) | 842 |
| BbvI | GCAGC | 3 cut(s) | 171, 1142, 1279 |
| BccI | CCATC | 3 cut(s) | 863, 1022, 1100 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 33, 67 |
| BciT130I | CCWGG | 3 cut(s) | 579, 660, 738 |
| BcoDI | GTCTC | 4 cut(s) | 81, 157, 446, 1298 |
| BfaI | CTAG | 3 cut(s) | 521, 567, 1229 |
| BfmI | CTRYAG | 1 cut(s) | 1443 |
| BfoI | RGCGCY | 1 cut(s) | 30 |
| BfrI | CTTAAG | 1 cut(s) | 407 |
| BfuAI | ACCTGC | 1 cut(s) | 864 |
| Bme1390I | CCNGG | 3 cut(s) | 579, 660, 738 |
| Bme18I | GGWCC | 1 cut(s) | 656 |
| BmeT110I | CYCGRG | 1 cut(s) | 115 |
| BmgT120I | GGNCC | 5 cut(s) | 656, 734, 745, 1075, 1355 |
| BmiI | GGNNCC | 3 cut(s) | 146, 1357, 1440 |
| BmrFI | CCNGG | 3 cut(s) | 579, 660, 738 |
| BmsI | GCATC | 2 cut(s) | 352, 688 |
| BpuEI | CTTGAG | 2 cut(s) | 856, 1041 |
| Bsa29I | ATCGAT | 1 cut(s) | 272 |
| BsaBI | GATNNNNATC | 1 cut(s) | 627 |
| BsaI | GGTCTC | 3 cut(s) | 81, 446, 1298 |
| BsaJI | CCNNGG | 7 cut(s) | 75, 116, 705, 1308, 1329, 1351, 1359 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 123, 137, 153, 167, 427, 457, 1280, 1310 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 692, 822 |
| Bse118I | RCCGGY | 2 cut(s) | 206, 954 |
| Bse3DI | GCAATG | 1 cut(s) | 51 |
| Bse8I | GATNNNNATC | 1 cut(s) | 627 |
| BseBI | CCWGG | 3 cut(s) | 579, 660, 738 |
| BseCI | ATCGAT | 1 cut(s) | 272 |
| BseDI | CCNNGG | 7 cut(s) | 75, 116, 705, 1308, 1329, 1351, 1359 |
| BseGI | GGATG | 1 cut(s) | 561 |
| BseJI | GATNNNNATC | 1 cut(s) | 627 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 692, 822 |
| BseMI | GCAATG | 1 cut(s) | 51 |
| BseMII | CTCAG | 2 cut(s) | 14, 1116 |
| BseRI | GAGGAG | 3 cut(s) | 505, 708, 908 |
| BseSI | GKGCMC | 1 cut(s) | 41 |
| BseX3I | CGGCCG | 1 cut(s) | 14 |
| BseXI | GCAGC | 3 cut(s) | 171, 1142, 1279 |
| BsgI | GTGCAG | 1 cut(s) | 248 |
| Bsh1236I | CGCG | 4 cut(s) | 13, 19, 77, 150 |
| Bsh1285I | CGRYCG | 1 cut(s) | 17 |
| BshFI | GGCC | 8 cut(s) | 16, 80, 736, 746, 826, 1077, 1227, 1356 |
| BshVI | ATCGAT | 1 cut(s) | 272 |
| BsiEI | CGRYCG | 1 cut(s) | 17 |
| BsiHKAI | GWGCWC | 1 cut(s) | 842 |
| BsiHKCI | CYCGRG | 1 cut(s) | 115 |
| BsiSI | CCGG | 2 cut(s) | 207, 955 |
| BslFI | GGGAC | 4 cut(s) | 97, 480, 668, 1153 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 692, 822 |
| BsmAI | GTCTC | 4 cut(s) | 81, 157, 446, 1298 |
| BsmBI | CGTCTC | 1 cut(s) | 157 |
| BsmFI | GGGAC | 4 cut(s) | 97, 480, 668, 1153 |
| BsnI | GGCC | 8 cut(s) | 16, 80, 736, 746, 826, 1077, 1227, 1356 |
| Bso31I | GGTCTC | 3 cut(s) | 81, 446, 1298 |
| BsoBI | CYCGRG | 1 cut(s) | 115 |
| Bsp1286I | GDGCHC | 2 cut(s) | 41, 842 |
| Bsp143I | GATC | 5 cut(s) | 269, 273, 622, 1333, 1347 |
| Bsp19I | CCATGG | 1 cut(s) | 1351 |
| BspANI | GGCC | 8 cut(s) | 16, 80, 736, 746, 826, 1077, 1227, 1356 |
| BspCNI | CTCAG | 2 cut(s) | 15, 1115 |
| BspDI | ATCGAT | 1 cut(s) | 272 |
| BspFNI | CGCG | 4 cut(s) | 13, 19, 77, 150 |
| BspHI | TCATGA | 1 cut(s) | 1080 |
| BspLI | GGNNCC | 3 cut(s) | 146, 1357, 1440 |
| BspMI | ACCTGC | 1 cut(s) | 864 |
| BspPI | GGATC | 2 cut(s) | 1341, 1342 |
| BspQI | GCTCTTC | 1 cut(s) | 128 |
| BspTI | CTTAAG | 1 cut(s) | 407 |
| BspTNI | GGTCTC | 3 cut(s) | 81, 446, 1298 |
| BsrBI | CCGCTC | 1 cut(s) | 404 |
| BsrDI | GCAATG | 1 cut(s) | 51 |
| BsrFI | RCCGGY | 2 cut(s) | 206, 954 |
| BssAI | RCCGGY | 2 cut(s) | 206, 954 |
| BssECI | CCNNGG | 7 cut(s) | 75, 116, 705, 1308, 1329, 1351, 1359 |
| BssMI | GATC | 5 cut(s) | 269, 273, 622, 1333, 1347 |
| BssSI | CACGAG | 1 cut(s) | 1221 |
| BssT1I | CCWWGG | 3 cut(s) | 1329, 1351, 1359 |
| Bst2BI | CACGAG | 1 cut(s) | 1221 |
| Bst2UI | CCWGG | 3 cut(s) | 579, 660, 738 |
| Bst4CI | ACNGT | 8 cut(s) | 254, 359, 385, 527, 532, 646, 1144, 1309 |
| Bst6I | CTCTTC | 3 cut(s) | 109, 128, 260 |
| BstAFI | CTTAAG | 1 cut(s) | 407 |
| BstC8I | GCNNGC | 6 cut(s) | 166, 208, 612, 1015, 1053, 1297 |
| BstDEI | CTNAG | 3 cut(s) | 5, 23, 1102 |
| BstDSI | CCRYGG | 4 cut(s) | 75, 705, 1308, 1351 |
| BstF5I | GGATG | 1 cut(s) | 561 |
| BstFNI | CGCG | 4 cut(s) | 13, 19, 77, 150 |
| BstH2I | RGCGCY | 1 cut(s) | 30 |
| BstHHI | GCGC | 3 cut(s) | 13, 29, 434 |
| BstKTI | GATC | 5 cut(s) | 272, 276, 625, 1336, 1350 |
| BstMAI | GTCTC | 4 cut(s) | 81, 157, 446, 1298 |
| BstMBI | GATC | 5 cut(s) | 269, 273, 622, 1333, 1347 |
| BstMCI | CGRYCG | 1 cut(s) | 17 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 10, 174, 203, 401, 1130 |
| BstNI | CCWGG | 3 cut(s) | 579, 660, 738 |
| BstNSI | RCATGY | 1 cut(s) | 614 |
| BstSCI | CCNGG | 3 cut(s) | 577, 658, 736 |
| BstSFI | CTRYAG | 1 cut(s) | 1443 |
| BstSLI | GKGCMC | 1 cut(s) | 41 |
| BstUI | CGCG | 4 cut(s) | 13, 19, 77, 150 |
| BstV1I | GCAGC | 3 cut(s) | 171, 1142, 1279 |
| BstX2I | RGATCY | 1 cut(s) | 1333 |
| BstYI | RGATCY | 1 cut(s) | 1333 |
| BstZI | CGGCCG | 1 cut(s) | 14 |
| Bsu15I | ATCGAT | 1 cut(s) | 272 |
| BsuRI | GGCC | 8 cut(s) | 16, 80, 736, 746, 826, 1077, 1227, 1356 |
| BsuTUI | ATCGAT | 1 cut(s) | 272 |
| BtgI | CCRYGG | 4 cut(s) | 75, 705, 1308, 1351 |
| BtsCI | GGATG | 1 cut(s) | 561 |
| BtsI | GCAGTG | 1 cut(s) | 39 |
| BtsIMutI | CAGTG | 2 cut(s) | 39, 636 |
| BveI | ACCTGC | 1 cut(s) | 864 |
| Cac8I | GCNNGC | 6 cut(s) | 166, 208, 612, 1015, 1053, 1297 |
| CciI | TCATGA | 1 cut(s) | 1080 |
| CciNI | GCGGCCGC | 1 cut(s) | 14 |
| CfoI | GCGC | 3 cut(s) | 13, 29, 434 |
| Cfr10I | RCCGGY | 2 cut(s) | 206, 954 |
| Cfr13I | GGNCC | 5 cut(s) | 656, 734, 745, 1075, 1355 |
| Cfr42I | CCGCGG | 1 cut(s) | 78 |
| ClaI | ATCGAT | 1 cut(s) | 272 |
| CseI | GACGC | 2 cut(s) | 139, 1412 |
| Csp6I | GTAC | 2 cut(s) | 528, 1188 |
| CviAII | CATG | 7 cut(s) | 31, 82, 611, 970, 1081, 1136, 1352 |
| CviQI | GTAC | 2 cut(s) | 528, 1188 |
| DdeI | CTNAG | 3 cut(s) | 5, 23, 1102 |
| DpnI | GATC | 5 cut(s) | 271, 275, 624, 1335, 1349 |
| DpnII | GATC | 5 cut(s) | 269, 273, 622, 1333, 1347 |
| EaeI | YGGCCR | 3 cut(s) | 14, 78, 824 |
| EagI | CGGCCG | 1 cut(s) | 14 |
| Eam1104I | CTCTTC | 3 cut(s) | 109, 128, 260 |
| EarI | CTCTTC | 3 cut(s) | 109, 128, 260 |
| EciI | GGCGGA | 1 cut(s) | 193 |
| EclXI | CGGCCG | 1 cut(s) | 14 |
| Eco130I | CCWWGG | 3 cut(s) | 1329, 1351, 1359 |
| Eco147I | AGGCCT | 1 cut(s) | 1227 |
| Eco31I | GGTCTC | 3 cut(s) | 81, 446, 1298 |
| Eco47I | GGWCC | 1 cut(s) | 656 |
| Eco52I | CGGCCG | 1 cut(s) | 14 |
| Eco57I | CTGAAG | 3 cut(s) | 154, 417, 1146 |
| Eco88I | CYCGRG | 1 cut(s) | 115 |
| EcoO109I | RGGNCCY | 1 cut(s) | 734 |
| EcoRI | GAATTC | 1 cut(s) | 1394 |
| EcoRII | CCWGG | 3 cut(s) | 577, 658, 736 |
| EcoT14I | CCWWGG | 3 cut(s) | 1329, 1351, 1359 |
| ErhI | CCWWGG | 3 cut(s) | 1329, 1351, 1359 |
| Esp3I | CGTCTC | 1 cut(s) | 157 |
| FaeI | CATG | 7 cut(s) | 34, 85, 614, 973, 1084, 1139, 1355 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 285, 317, 390, 422 |
| FaqI | GGGAC | 4 cut(s) | 97, 480, 668, 1153 |
| FatI | CATG | 7 cut(s) | 30, 81, 610, 969, 1080, 1135, 1351 |
| FauI | CCCGC | 1 cut(s) | 173 |
| FauNDI | CATATG | 2 cut(s) | 278, 596 |
| FokI | GGATG | 1 cut(s) | 548 |
| FspBI | CTAG | 3 cut(s) | 521, 567, 1229 |
| GlaI | GCGC | 3 cut(s) | 12, 28, 433 |
| HaeII | RGCGCY | 1 cut(s) | 30 |
| HaeIII | GGCC | 8 cut(s) | 16, 80, 736, 746, 826, 1077, 1227, 1356 |
| HapII | CCGG | 2 cut(s) | 207, 955 |
| HgaI | GACGC | 2 cut(s) | 139, 1412 |
| HhaI | GCGC | 3 cut(s) | 13, 29, 434 |
| Hin1II | CATG | 7 cut(s) | 34, 85, 614, 973, 1084, 1139, 1355 |
| Hin6I | GCGC | 3 cut(s) | 11, 27, 432 |
| HinP1I | GCGC | 3 cut(s) | 11, 27, 432 |
| HindIII | AAGCTT | 1 cut(s) | 1430 |
| HinfI | GANTC | 4 cut(s) | 232, 493, 770, 791 |
| HpaII | CCGG | 2 cut(s) | 207, 955 |
| HphI | GGTGA | 1 cut(s) | 266 |
| Hpy166II | GTNNAC | 1 cut(s) | 542 |
| Hpy188I | TCNGA | 3 cut(s) | 237, 1105, 1170 |
| Hpy188III | TCNNGA | 6 cut(s) | 142, 317, 446, 521, 1081, 1436 |
| Hpy8I | GTNNAC | 1 cut(s) | 542 |
| Hpy99I | CGWCG | 2 cut(s) | 64, 73 |
| HpyAV | CCTTC | 3 cut(s) | 166, 457, 683 |
| HpyCH4III | ACNGT | 8 cut(s) | 254, 359, 385, 527, 532, 646, 1144, 1309 |
| HpyCH4IV | ACGT | 2 cut(s) | 68, 417 |
| HpyCH4V | TGCA | 5 cut(s) | 44, 229, 983, 1017, 1299 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 10, 174, 203, 401, 1130 |
| HpyF3I | CTNAG | 3 cut(s) | 5, 23, 1102 |
| HpySE526I | ACGT | 2 cut(s) | 68, 417 |
| Hsp92II | CATG | 7 cut(s) | 34, 85, 614, 973, 1084, 1139, 1355 |
| HspAI | GCGC | 3 cut(s) | 11, 27, 432 |
| KroI | GCCGGC | 1 cut(s) | 206 |
| KroNI | GCCGGC | 1 cut(s) | 208 |
| KspI | CCGCGG | 1 cut(s) | 78 |
| Kzo9I | GATC | 5 cut(s) | 269, 273, 622, 1333, 1347 |
| LguI | GCTCTTC | 1 cut(s) | 128 |
| Lsp1109I | GCAGC | 3 cut(s) | 171, 1142, 1279 |
| LweI | GCATC | 2 cut(s) | 352, 688 |
| MaeI | CTAG | 3 cut(s) | 521, 567, 1229 |
| MaeII | ACGT | 2 cut(s) | 68, 417 |
| MaeIII | GTNAC | 3 cut(s) | 379, 1144, 1161 |
| MalI | GATC | 5 cut(s) | 271, 275, 624, 1335, 1349 |
| MbiI | CCGCTC | 1 cut(s) | 404 |
| MboI | GATC | 5 cut(s) | 269, 273, 622, 1333, 1347 |
| MboII | GAAGA | 7 cut(s) | 96, 99, 115, 192, 277, 941, 1403 |
| MflI | RGATCY | 1 cut(s) | 1333 |
| MhlI | GDGCHC | 2 cut(s) | 41, 842 |
| MluCI | AATT | 8 cut(s) | 438, 467, 507, 724, 934, 1021, 1244, 1394 |
| MlyI | GAGTC | 3 cut(s) | 502, 779, 785 |
| MmeI | TCCRAC | 2 cut(s) | 563, 1266 |
| MroNI | GCCGGC | 1 cut(s) | 206 |
| MseI | TTAA | 7 cut(s) | 291, 408, 651, 669, 858, 879, 1453 |
| MslI | CAYNNNNRTG | 1 cut(s) | 44 |
| MspA1I | CMGCKG | 1 cut(s) | 77 |
| MspCI | CTTAAG | 1 cut(s) | 407 |
| MspI | CCGG | 2 cut(s) | 207, 955 |
| MspR9I | CCNGG | 3 cut(s) | 579, 660, 738 |
| MvaI | CCWGG | 3 cut(s) | 579, 660, 738 |
| MvnI | CGCG | 4 cut(s) | 13, 19, 77, 150 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 10, 174, 203, 401, 1130 |
| NaeI | GCCGGC | 1 cut(s) | 208 |
| NcoI | CCATGG | 1 cut(s) | 1351 |
| NdeI | CATATG | 2 cut(s) | 278, 596 |
| NdeII | GATC | 5 cut(s) | 269, 273, 622, 1333, 1347 |
| NgoMIV | GCCGGC | 1 cut(s) | 206 |
| NlaIII | CATG | 7 cut(s) | 34, 85, 614, 973, 1084, 1139, 1355 |
| NlaIV | GGNNCC | 3 cut(s) | 146, 1357, 1440 |
| NotI | GCGGCCGC | 1 cut(s) | 14 |
| NspI | RCATGY | 1 cut(s) | 614 |
| PaeI | GCATGC | 1 cut(s) | 614 |
| PagI | TCATGA | 1 cut(s) | 1080 |
| PceI | AGGCCT | 1 cut(s) | 1227 |
| PciSI | GCTCTTC | 1 cut(s) | 128 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 65, 68, 147, 800 |
| PdiI | GCCGGC | 1 cut(s) | 208 |
| PfeI | GAWTC | 1 cut(s) | 232 |
| PflFI | GACNNNGTC | 1 cut(s) | 1406 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 822 |
| PleI | GAGTC | 3 cut(s) | 501, 778, 785 |
| PpsI | GAGTC | 3 cut(s) | 501, 778, 785 |
| PsiI | TTATAA | 1 cut(s) | 723 |
| Psp1406I | AACGTT | 1 cut(s) | 417 |
| Psp6I | CCWGG | 3 cut(s) | 577, 658, 736 |
| PspGI | CCWGG | 3 cut(s) | 577, 658, 736 |
| PspN4I | GGNNCC | 3 cut(s) | 146, 1357, 1440 |
| PspPI | GGNCC | 5 cut(s) | 656, 734, 745, 1075, 1355 |
| PsuI | RGATCY | 1 cut(s) | 1333 |
| PsyI | GACNNNGTC | 1 cut(s) | 1406 |
| RsaI | GTAC | 2 cut(s) | 529, 1189 |
| RsaNI | GTAC | 2 cut(s) | 528, 1188 |
| RseI | CAYNNNNRTG | 1 cut(s) | 44 |
| SacII | CCGCGG | 1 cut(s) | 78 |
| SapI | GCTCTTC | 1 cut(s) | 128 |
| SaqAI | TTAA | 7 cut(s) | 291, 408, 651, 669, 858, 879, 1453 |
| Sau3AI | GATC | 5 cut(s) | 269, 273, 622, 1333, 1347 |
| Sau96I | GGNCC | 5 cut(s) | 656, 734, 745, 1075, 1355 |
| SchI | GAGTC | 3 cut(s) | 502, 779, 785 |
| ScrFI | CCNGG | 3 cut(s) | 579, 660, 738 |
| SduI | GDGCHC | 2 cut(s) | 41, 842 |
| SfaNI | GCATC | 2 cut(s) | 352, 688 |
| SfcI | CTRYAG | 1 cut(s) | 1443 |
| Sfr303I | CCGCGG | 1 cut(s) | 78 |
| SgrBI | CCGCGG | 1 cut(s) | 78 |
| SinI | GGWCC | 1 cut(s) | 656 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 44 |
| SmlI | CTYRAG | 3 cut(s) | 407, 835, 1056 |
| SmoI | CTYRAG | 3 cut(s) | 407, 835, 1056 |
| SphI | GCATGC | 1 cut(s) | 614 |
| Sse9I | AATT | 8 cut(s) | 438, 467, 507, 724, 934, 1021, 1244, 1394 |
| SseBI | AGGCCT | 1 cut(s) | 1227 |
| SspI | AATATT | 1 cut(s) | 1209 |
| SspMI | CTAG | 3 cut(s) | 521, 567, 1229 |
| StuI | AGGCCT | 1 cut(s) | 1227 |
| StyD4I | CCNGG | 3 cut(s) | 577, 658, 736 |
| StyI | CCWWGG | 3 cut(s) | 1329, 1351, 1359 |
| TaaI | ACNGT | 8 cut(s) | 254, 359, 385, 527, 532, 646, 1144, 1309 |
| TaiI | ACGT | 2 cut(s) | 71, 420 |
| TaqI | TCGA | 5 cut(s) | 213, 272, 631, 778, 1367 |
| TasI | AATT | 8 cut(s) | 438, 467, 507, 724, 934, 1021, 1244, 1394 |
| TatI | WGTACW | 1 cut(s) | 1187 |
| TauI | GCSGC | 7 cut(s) | 16, 19, 80, 164, 177, 404, 829 |
| TfiI | GAWTC | 1 cut(s) | 232 |
| Tru1I | TTAA | 7 cut(s) | 291, 408, 651, 669, 858, 879, 1453 |
| Tru9I | TTAA | 7 cut(s) | 291, 408, 651, 669, 858, 879, 1453 |
| TscAI | CASTG | 2 cut(s) | 46, 643 |
| TseI | GCWGC | 3 cut(s) | 184, 1130, 1292 |
| TspDTI | ATGAA | 4 cut(s) | 273, 278, 963, 1387 |
| TspGWI | ACGGA | 1 cut(s) | 527 |
| TspRI | CASTG | 2 cut(s) | 46, 643 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1406 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 822 |
| Vha464I | CTTAAG | 1 cut(s) | 407 |
| VpaK11BI | GGWCC | 1 cut(s) | 656 |
| XapI | RAATTY | 3 cut(s) | 467, 934, 1394 |
| XbaI | TCTAGA | 1 cut(s) | 520 |
| XceI | RCATGY | 1 cut(s) | 614 |
| XspI | CTAG | 3 cut(s) | 521, 567, 1229 |