Isocitrate dehydrogenase NADP
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G14590 |
| fragaria_vesca | FvH4_6g51040 FvH4_6g51040 FvH4_6g51040 |
| malus_domestica | MD09G1029200.v1.1 MD17G1031300.v1.1 |
| prunus_persica | Prupe.3G288200_v2.0.a1 Prupe.3G288200_v2.0.a1 Prupe.3G288200_v2.0.a1 |
| pyrus_communis | pycom111g02330 pycom17g02880 |
| rosa_chinensis | RchiOBHm_Chr2g0172581 RchiOBHm_Chr3g0476461 |
| rosa_laevigata | RLG00000022118 |
| rosa_multiflora | Rmu_sc0000912.1_g000003 Rmu_ssc0000245.1_g000018 |
| rosa_roxburghii | Rroxscaffold_2G00079740 |
| rosa_rugosa | Rorug02G0560000 |
| rosa_samantha | Rh2AG636200 Rh2BG649600 Rh2DG663900 |
| rosa_wichuraiana | Rw2G052640 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 855, 1441 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 813 |
| AccII | CGCG | 3 cut(s) | 37, 39, 141 |
| AciI | CCGC | 3 cut(s) | 42, 139, 153 |
| AclWI | GGATC | 3 cut(s) | 272, 1332, 1333 |
| AcoI | YGGCCR | 1 cut(s) | 815 |
| AcuI | CTGAAG | 1 cut(s) | 1137 |
| AfaI | GTAC | 4 cut(s) | 404, 520, 749, 1180 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 114, 307, 683, 813, 1098 |
| AflII | CTTAAG | 2 cut(s) | 398, 848 |
| AgsI | TTSAA | 5 cut(s) | 124, 721, 920, 1197, 1375 |
| AjnI | CCWGG | 3 cut(s) | 568, 649, 727 |
| AluBI | AGCT | 8 cut(s) | 93, 626, 658, 703, 773, 1115, 1124, 1423 |
| AluI | AGCT | 8 cut(s) | 93, 626, 658, 703, 773, 1115, 1124, 1423 |
| Alw21I | GWGCWC | 1 cut(s) | 833 |
| Alw26I | GTCTC | 4 cut(s) | 7, 148, 681, 1289 |
| AlwI | GGATC | 3 cut(s) | 272, 1332, 1333 |
| Ama87I | CYCGRG | 1 cut(s) | 79 |
| AoxI | GGCC | 5 cut(s) | 735, 815, 1066, 1216, 1345 |
| ApeKI | GCWGC | 4 cut(s) | 188, 1084, 1121, 1283 |
| AspLEI | GCGC | 4 cut(s) | 29, 39, 41, 120 |
| AspS9I | GGNCC | 5 cut(s) | 647, 725, 736, 1066, 1346 |
| AsuC2I | CCSGG | 1 cut(s) | 218 |
| AsuHPI | GGTGA | 2 cut(s) | 260, 623 |
| AsuII | TTCGAA | 1 cut(s) | 1270 |
| AvaI | CYCGRG | 1 cut(s) | 79 |
| AvaII | GGWCC | 2 cut(s) | 647, 725 |
| BalI | TGGCCA | 1 cut(s) | 817 |
| Bbv12I | GWGCWC | 1 cut(s) | 833 |
| BbvI | GCAGC | 4 cut(s) | 175, 1071, 1133, 1270 |
| BccI | CCATC | 5 cut(s) | 593, 790, 854, 1013, 1091 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1406, 1440 |
| BciT130I | CCWGG | 3 cut(s) | 570, 651, 729 |
| BclI | TGATCA | 1 cut(s) | 613 |
| BcnI | CCSGG | 1 cut(s) | 218 |
| BcoDI | GTCTC | 4 cut(s) | 7, 148, 681, 1289 |
| BfaI | CTAG | 4 cut(s) | 90, 558, 1220, 1259 |
| BfmI | CTRYAG | 1 cut(s) | 72 |
| BfoI | RGCGCY | 2 cut(s) | 30, 121 |
| BfrI | CTTAAG | 2 cut(s) | 398, 848 |
| BfuAI | ACCTGC | 2 cut(s) | 855, 1441 |
| BisI | GCNGC | 6 cut(s) | 42, 153, 189, 1085, 1122, 1284 |
| BlsI | GCNGC | 6 cut(s) | 43, 154, 190, 1086, 1123, 1285 |
| Bme1390I | CCNGG | 4 cut(s) | 218, 570, 651, 729 |
| Bme18I | GGWCC | 2 cut(s) | 647, 725 |
| BmeT110I | CYCGRG | 1 cut(s) | 79 |
| BmgT120I | GGNCC | 5 cut(s) | 647, 725, 736, 1066, 1346 |
| BmiI | GGNNCC | 4 cut(s) | 86, 648, 1348, 1431 |
| BmrFI | CCNGG | 4 cut(s) | 218, 570, 651, 729 |
| BmsI | GCATC | 2 cut(s) | 343, 952 |
| Bpu14I | TTCGAA | 1 cut(s) | 1270 |
| BpuEI | CTTGAG | 2 cut(s) | 847, 1032 |
| BpuMI | CCSGG | 1 cut(s) | 218 |
| BsaBI | GATNNNNATC | 1 cut(s) | 618 |
| BsaJI | CCNNGG | 4 cut(s) | 80, 113, 1342, 1350 |
| BsaWI | WCCGGW | 2 cut(s) | 177, 197 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 418, 448 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 114, 307, 683, 813, 1098 |
| Bse1I | ACTGG | 1 cut(s) | 1176 |
| Bse8I | GATNNNNATC | 1 cut(s) | 618 |
| BseBI | CCWGG | 3 cut(s) | 570, 651, 729 |
| BseDI | CCNNGG | 4 cut(s) | 80, 113, 1342, 1350 |
| BseJI | GATNNNNATC | 1 cut(s) | 618 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 114, 307, 683, 813, 1098 |
| BseMII | CTCAG | 1 cut(s) | 1107 |
| BseNI | ACTGG | 1 cut(s) | 1176 |
| BsePI | GCGCGC | 1 cut(s) | 37 |
| BseRI | GAGGAG | 3 cut(s) | 496, 699, 899 |
| BseXI | GCAGC | 4 cut(s) | 175, 1071, 1133, 1270 |
| Bsh1236I | CGCG | 3 cut(s) | 37, 39, 141 |
| Bsh1285I | CGRYCG | 1 cut(s) | 234 |
| BshFI | GGCC | 5 cut(s) | 737, 817, 1068, 1218, 1347 |
| BsiEI | CGRYCG | 1 cut(s) | 234 |
| BsiHKAI | GWGCWC | 1 cut(s) | 833 |
| BsiHKCI | CYCGRG | 1 cut(s) | 79 |
| BsiSI | CCGG | 3 cut(s) | 178, 198, 217 |
| BslFI | GGGAC | 4 cut(s) | 471, 660, 1144, 1179 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 114, 307, 683, 813, 1098 |
| BsmAI | GTCTC | 4 cut(s) | 7, 148, 681, 1289 |
| BsmBI | CGTCTC | 1 cut(s) | 148 |
| BsmFI | GGGAC | 4 cut(s) | 471, 660, 1144, 1179 |
| BsnI | GGCC | 5 cut(s) | 737, 817, 1068, 1218, 1347 |
| BsoBI | CYCGRG | 1 cut(s) | 79 |
| Bsp119I | TTCGAA | 1 cut(s) | 1270 |
| Bsp1286I | GDGCHC | 1 cut(s) | 833 |
| Bsp1407I | TGTACA | 1 cut(s) | 747 |
| Bsp143I | GATC | 5 cut(s) | 231, 264, 613, 1324, 1338 |
| Bsp19I | CCATGG | 1 cut(s) | 1342 |
| BspACI | CCGC | 3 cut(s) | 42, 139, 153 |
| BspANI | GGCC | 5 cut(s) | 737, 817, 1068, 1218, 1347 |
| BspCNI | CTCAG | 1 cut(s) | 1106 |
| BspFNI | CGCG | 3 cut(s) | 37, 39, 141 |
| BspLI | GGNNCC | 4 cut(s) | 86, 648, 1348, 1431 |
| BspMI | ACCTGC | 2 cut(s) | 855, 1441 |
| BspPI | GGATC | 3 cut(s) | 272, 1332, 1333 |
| BspT104I | TTCGAA | 1 cut(s) | 1270 |
| BspTI | CTTAAG | 2 cut(s) | 398, 848 |
| BsrGI | TGTACA | 1 cut(s) | 747 |
| BsrI | ACTGG | 1 cut(s) | 1176 |
| BssECI | CCNNGG | 4 cut(s) | 80, 113, 1342, 1350 |
| BssHII | GCGCGC | 1 cut(s) | 37 |
| BssMI | GATC | 5 cut(s) | 231, 264, 613, 1324, 1338 |
| BssT1I | CCWWGG | 2 cut(s) | 1342, 1350 |
| Bst2UI | CCWGG | 3 cut(s) | 570, 651, 729 |
| Bst6I | CTCTTC | 2 cut(s) | 790, 1377 |
| BstAFI | CTTAAG | 2 cut(s) | 398, 848 |
| BstAUI | TGTACA | 1 cut(s) | 747 |
| BstBI | TTCGAA | 1 cut(s) | 1270 |
| BstC8I | GCNNGC | 5 cut(s) | 39, 603, 1006, 1044, 1288 |
| BstDEI | CTNAG | 2 cut(s) | 1093, 1320 |
| BstDSI | CCRYGG | 1 cut(s) | 1342 |
| BstFNI | CGCG | 3 cut(s) | 37, 39, 141 |
| BstH2I | RGCGCY | 2 cut(s) | 30, 121 |
| BstHHI | GCGC | 4 cut(s) | 29, 39, 41, 120 |
| BstKTI | GATC | 5 cut(s) | 234, 267, 616, 1327, 1341 |
| BstMAI | GTCTC | 4 cut(s) | 7, 148, 681, 1289 |
| BstMBI | GATC | 5 cut(s) | 231, 264, 613, 1324, 1338 |
| BstMCI | CGRYCG | 1 cut(s) | 234 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1065, 1121 |
| BstNI | CCWGG | 3 cut(s) | 570, 651, 729 |
| BstNSI | RCATGY | 2 cut(s) | 605, 1290 |
| BstSCI | CCNGG | 4 cut(s) | 216, 568, 649, 727 |
| BstSFI | CTRYAG | 1 cut(s) | 72 |
| BstUI | CGCG | 3 cut(s) | 37, 39, 141 |
| BstV1I | GCAGC | 4 cut(s) | 175, 1071, 1133, 1270 |
| BstX2I | RGATCY | 1 cut(s) | 1324 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 796 |
| BstYI | RGATCY | 1 cut(s) | 1324 |
| BsuRI | GGCC | 5 cut(s) | 737, 817, 1068, 1218, 1347 |
| BtgI | CCRYGG | 1 cut(s) | 1342 |
| BtsIMutI | CAGTG | 2 cut(s) | 1305, 1404 |
| BveI | ACCTGC | 2 cut(s) | 855, 1441 |
| Cac8I | GCNNGC | 5 cut(s) | 39, 603, 1006, 1044, 1288 |
| CfoI | GCGC | 4 cut(s) | 29, 39, 41, 120 |
| Cfr13I | GGNCC | 5 cut(s) | 647, 725, 736, 1066, 1346 |
| CseI | GACGC | 1 cut(s) | 130 |
| Csp6I | GTAC | 4 cut(s) | 403, 519, 748, 1179 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 807, 842 |
| CviQI | GTAC | 4 cut(s) | 403, 519, 748, 1179 |
| DdeI | CTNAG | 2 cut(s) | 1093, 1320 |
| DpnI | GATC | 5 cut(s) | 233, 266, 615, 1326, 1340 |
| DpnII | GATC | 5 cut(s) | 231, 264, 613, 1324, 1338 |
| EaeI | YGGCCR | 1 cut(s) | 815 |
| Eam1104I | CTCTTC | 2 cut(s) | 790, 1377 |
| EarI | CTCTTC | 2 cut(s) | 790, 1377 |
| Eco130I | CCWWGG | 2 cut(s) | 1342, 1350 |
| Eco147I | AGGCCT | 1 cut(s) | 1218 |
| Eco32I | GATATC | 1 cut(s) | 51 |
| Eco47I | GGWCC | 2 cut(s) | 647, 725 |
| Eco57I | CTGAAG | 1 cut(s) | 1137 |
| Eco88I | CYCGRG | 1 cut(s) | 79 |
| EcoO109I | RGGNCCY | 1 cut(s) | 725 |
| EcoRII | CCWGG | 3 cut(s) | 568, 649, 727 |
| EcoRV | GATATC | 1 cut(s) | 51 |
| EcoT14I | CCWWGG | 2 cut(s) | 1342, 1350 |
| EcoT22I | ATGCAT | 1 cut(s) | 1292 |
| ErhI | CCWWGG | 2 cut(s) | 1342, 1350 |
| Esp3I | CGTCTC | 1 cut(s) | 148 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 276, 308, 381, 413 |
| FaqI | GGGAC | 4 cut(s) | 471, 660, 1144, 1179 |
| FauNDI | CATATG | 1 cut(s) | 269 |
| FbaI | TGATCA | 1 cut(s) | 613 |
| Fnu4HI | GCNGC | 6 cut(s) | 42, 153, 189, 1085, 1122, 1284 |
| Fsp4HI | GCNGC | 6 cut(s) | 42, 153, 189, 1085, 1122, 1284 |
| FspBI | CTAG | 4 cut(s) | 90, 558, 1220, 1259 |
| GlaI | GCGC | 4 cut(s) | 28, 38, 40, 119 |
| GluI | GCNGC | 6 cut(s) | 42, 153, 189, 1085, 1122, 1284 |
| HaeII | RGCGCY | 2 cut(s) | 30, 121 |
| HaeIII | GGCC | 5 cut(s) | 737, 817, 1068, 1218, 1347 |
| HapII | CCGG | 3 cut(s) | 178, 198, 217 |
| HgaI | GACGC | 1 cut(s) | 130 |
| HhaI | GCGC | 4 cut(s) | 29, 39, 41, 120 |
| Hin6I | GCGC | 4 cut(s) | 27, 37, 39, 118 |
| HinP1I | GCGC | 4 cut(s) | 27, 37, 39, 118 |
| HindIII | AAGCTT | 1 cut(s) | 1421 |
| HinfI | GANTC | 6 cut(s) | 15, 129, 226, 484, 761, 782 |
| HpaII | CCGG | 3 cut(s) | 178, 198, 217 |
| HphI | GGTGA | 2 cut(s) | 260, 623 |
| Hpy166II | GTNNAC | 1 cut(s) | 533 |
| Hpy188I | TCNGA | 4 cut(s) | 225, 231, 1096, 1161 |
| Hpy188III | TCNNGA | 6 cut(s) | 208, 437, 530, 677, 1030, 1427 |
| Hpy8I | GTNNAC | 1 cut(s) | 533 |
| Hpy99I | CGWCG | 1 cut(s) | 239 |
| HpyAV | CCTTC | 3 cut(s) | 448, 674, 1156 |
| HpyCH4V | TGCA | 5 cut(s) | 974, 1008, 1205, 1286, 1290 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1065, 1121 |
| HpyF3I | CTNAG | 2 cut(s) | 1093, 1320 |
| HspAI | GCGC | 4 cut(s) | 27, 37, 39, 118 |
| Ksp22I | TGATCA | 1 cut(s) | 613 |
| Kzo9I | GATC | 5 cut(s) | 231, 264, 613, 1324, 1338 |
| LmnI | GCTCC | 2 cut(s) | 180, 700 |
| Lsp1109I | GCAGC | 4 cut(s) | 175, 1071, 1133, 1270 |
| LweI | GCATC | 2 cut(s) | 343, 952 |
| MaeI | CTAG | 4 cut(s) | 90, 558, 1220, 1259 |
| MaeIII | GTNAC | 3 cut(s) | 370, 1135, 1152 |
| MalI | GATC | 5 cut(s) | 233, 266, 615, 1326, 1340 |
| MboI | GATC | 5 cut(s) | 231, 264, 613, 1324, 1338 |
| MboII | GAAGA | 8 cut(s) | 45, 48, 51, 54, 589, 777, 932, 1394 |
| MfeI | CAATTG | 1 cut(s) | 20 |
| MflI | RGATCY | 1 cut(s) | 1324 |
| MhlI | GDGCHC | 1 cut(s) | 833 |
| MlsI | TGGCCA | 1 cut(s) | 817 |
| MluCI | AATT | 4 cut(s) | 20, 498, 843, 1235 |
| MluNI | TGGCCA | 1 cut(s) | 817 |
| MlyI | GAGTC | 5 cut(s) | 9, 138, 493, 770, 776 |
| MmeI | TCCRAC | 1 cut(s) | 1257 |
| Mox20I | TGGCCA | 1 cut(s) | 817 |
| Mph1103I | ATGCAT | 1 cut(s) | 1292 |
| MscI | TGGCCA | 1 cut(s) | 817 |
| MseI | TTAA | 4 cut(s) | 399, 705, 849, 870 |
| MslI | CAYNNNNRTG | 1 cut(s) | 794 |
| Msp20I | TGGCCA | 1 cut(s) | 817 |
| MspCI | CTTAAG | 2 cut(s) | 398, 848 |
| MspI | CCGG | 3 cut(s) | 178, 198, 217 |
| MspR9I | CCNGG | 4 cut(s) | 218, 570, 651, 729 |
| MunI | CAATTG | 1 cut(s) | 20 |
| MvaI | CCWGG | 3 cut(s) | 570, 651, 729 |
| MvnI | CGCG | 3 cut(s) | 37, 39, 141 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1065, 1121 |
| NciI | CCSGG | 1 cut(s) | 218 |
| NcoI | CCATGG | 1 cut(s) | 1342 |
| NdeI | CATATG | 1 cut(s) | 269 |
| NdeII | GATC | 5 cut(s) | 231, 264, 613, 1324, 1338 |
| NlaIV | GGNNCC | 4 cut(s) | 86, 648, 1348, 1431 |
| NmeAIII | GCCGAG | 1 cut(s) | 138 |
| NsiI | ATGCAT | 1 cut(s) | 1292 |
| NspI | RCATGY | 2 cut(s) | 605, 1290 |
| NspV | TTCGAA | 1 cut(s) | 1270 |
| PaeI | GCATGC | 2 cut(s) | 605, 1290 |
| PauI | GCGCGC | 1 cut(s) | 37 |
| PceI | AGGCCT | 1 cut(s) | 1218 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 138 |
| PfeI | GAWTC | 1 cut(s) | 226 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 813 |
| PkrI | GCNGC | 6 cut(s) | 43, 154, 190, 1086, 1123, 1285 |
| Ple19I | CGATCG | 1 cut(s) | 234 |
| PleI | GAGTC | 5 cut(s) | 9, 137, 492, 769, 776 |
| PpsI | GAGTC | 5 cut(s) | 9, 137, 492, 769, 776 |
| PpuMI | RGGWCCY | 1 cut(s) | 725 |
| Psp5II | RGGWCCY | 1 cut(s) | 725 |
| Psp6I | CCWGG | 3 cut(s) | 568, 649, 727 |
| PspGI | CCWGG | 3 cut(s) | 568, 649, 727 |
| PspN4I | GGNNCC | 4 cut(s) | 86, 648, 1348, 1431 |
| PspPI | GGNCC | 5 cut(s) | 647, 725, 736, 1066, 1346 |
| PspPPI | RGGWCCY | 1 cut(s) | 725 |
| PsuI | RGATCY | 1 cut(s) | 1324 |
| PteI | GCGCGC | 1 cut(s) | 37 |
| PvuI | CGATCG | 1 cut(s) | 234 |
| RsaI | GTAC | 4 cut(s) | 404, 520, 749, 1180 |
| RsaNI | GTAC | 4 cut(s) | 403, 519, 748, 1179 |
| RseI | CAYNNNNRTG | 1 cut(s) | 794 |
| SaqAI | TTAA | 4 cut(s) | 399, 705, 849, 870 |
| SatI | GCNGC | 6 cut(s) | 42, 153, 189, 1085, 1122, 1284 |
| Sau3AI | GATC | 5 cut(s) | 231, 264, 613, 1324, 1338 |
| Sau96I | GGNCC | 5 cut(s) | 647, 725, 736, 1066, 1346 |
| SchI | GAGTC | 5 cut(s) | 9, 138, 493, 770, 776 |
| ScrFI | CCNGG | 4 cut(s) | 218, 570, 651, 729 |
| SduI | GDGCHC | 1 cut(s) | 833 |
| SfaNI | GCATC | 2 cut(s) | 343, 952 |
| SfcI | CTRYAG | 1 cut(s) | 72 |
| SfuI | TTCGAA | 1 cut(s) | 1270 |
| SinI | GGWCC | 2 cut(s) | 647, 725 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 794 |
| SmlI | CTYRAG | 4 cut(s) | 398, 826, 848, 1047 |
| SmoI | CTYRAG | 4 cut(s) | 398, 826, 848, 1047 |
| SphI | GCATGC | 2 cut(s) | 605, 1290 |
| Sse9I | AATT | 4 cut(s) | 20, 498, 843, 1235 |
| SseBI | AGGCCT | 1 cut(s) | 1218 |
| SsiI | CCGC | 3 cut(s) | 42, 139, 153 |
| SspI | AATATT | 1 cut(s) | 1200 |
| SspMI | CTAG | 4 cut(s) | 90, 558, 1220, 1259 |
| StuI | AGGCCT | 1 cut(s) | 1218 |
| StyD4I | CCNGG | 4 cut(s) | 216, 568, 649, 727 |
| StyI | CCWWGG | 2 cut(s) | 1342, 1350 |
| TaqI | TCGA | 7 cut(s) | 207, 237, 622, 769, 794, 882, 1270 |
| TasI | AATT | 4 cut(s) | 20, 498, 843, 1235 |
| TatI | WGTACW | 3 cut(s) | 402, 747, 1178 |
| TauI | GCSGC | 2 cut(s) | 44, 155 |
| TfiI | GAWTC | 1 cut(s) | 226 |
| Tru1I | TTAA | 4 cut(s) | 399, 705, 849, 870 |
| Tru9I | TTAA | 4 cut(s) | 399, 705, 849, 870 |
| TscAI | CASTG | 2 cut(s) | 1305, 1404 |
| TseI | GCWGC | 4 cut(s) | 188, 1084, 1121, 1283 |
| TspDTI | ATGAA | 3 cut(s) | 267, 456, 467 |
| TspGWI | ACGGA | 1 cut(s) | 713 |
| TspRI | CASTG | 2 cut(s) | 1305, 1404 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 813 |
| Vha464I | CTTAAG | 2 cut(s) | 398, 848 |
| VpaK11BI | GGWCC | 2 cut(s) | 647, 725 |
| XceI | RCATGY | 2 cut(s) | 605, 1290 |
| XspI | CTAG | 4 cut(s) | 90, 558, 1220, 1259 |
| Zsp2I | ATGCAT | 1 cut(s) | 1292 |