pycom17g05770

Sister chromatid cohesion protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0010273
Physical Location & Seq
Reverse (-)
4077608 .. 4080997
3390 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2322 bp
ATGTTATGTGTGCTTATCGATCCATCATATCGTGCTTTGCATAGGCCAAGTCAAAATGGGTCGCTCGAAGTTGAGGAAGATGAAGAGCCTGATGCTGAATTTGGCTCAGCAAGCAAGAAGAGACGCAGTATCAAGACCGTGAAAGTGCAGAAATCCTCATTTAACAGGGTCTCTGCTGCTGTGAATAATATTCTTCAGAAAATGTGCACCATTCTTGGTTTACTCAAGGATTTGTTGTTAATAGAAAGGTTATCAGATGGTTGTATCTTACAACTAGTGAAAACATGCTTCACAACATTTATGGTGGATAATATCCAGCTCTTGCAACTGAAGGCAATGGGTTTGATCAGTGGGATATTCTATTCATACACTCAGCATCGCACATATGTGATAGATGAATTAATTCAGTTGCTTTGGAAGTTGCCAGTCTCAAAGCGAGCTTTGAGAGCCTATCACCTACCTGACGAAGAGCAAAGGCAGATTCAGATGATCACTGCTTTGCTGATTCAGTTGGTTCACTATAGTGCAAACCTTCCTGAATCATTAAGGCAGGAATCAAGTAGTAATTCTATCTTAGAACTCTCTGTCAATGCCGATTATCCAACTAAAGGTCACGAGGCAGCAACAGAGGCATGTTGTCACTTTTGGACTCGTGTACTTCAGCGCTTTGCTGGTGCAAAGACTCAGGAAGCTTCAGAGTTGAAAGTAATGATGGAGAATCTTGTTATCGATCTCTTGACAACATTGAATTTACCTGAATATCCGGCTTCAGCTCCTATTCTGGAGGTTCTTTGCGTCTTGTTACTCCAGAATGCTGGGCTGAAATCTAAAGACGTAGCTGCACGTTCAATGGCTATAGACCTTCTCGGCACAATTGCTGCAAGATTGAAGCGTGATTCTCTCCTTTGCAGTAGGGACAAAATCTGGATACTTCAGGAGTTGGTTAGTGACGATGGGGTTGATCAGACATATCCAAGAGACGCATGCTCAGTTTGTTTAGATGGTAGGGTTGAAAAAAATGTCTTTGTTTGTCAAGGTTGTCAGAGAATGTTTCATGCTGATTGTATGGGAGTGAGAGAATATGAAGTTCCAAATCGAAGTTGGCACTGTCAGATATGCCTCTGCAGGAAGCAACTTCTTGTTTTACAATCCTACTGTAAGTCACAATGCAAAGATGAAGGAATAAAGGATCGAAGTCGTTCAGGAAGAAACACTGAAGTTGCTTTTTCAATTACGAAGCCTGAGGTAGTCCAACAGATACTTTTGAATTACCTTCAAGATACCACATCAGCTGATGATGGGCAGCTCTTTGTTCGCTGGTTTTATCTCTTGTTGTGGTACAAGGATGATTCGAAATCACAGCAGAAGTTCATGTACTATCTTGCTAGACTGAAATCAAAAGAAATAGTTCGGGATTCTGGGACTGGTTTTTCATTATTGACAAGGGATTCAGTCAAGAAAATTACTTTAGCATTGGCACAAAAAAACTCTTTCTCCAGAGGGTTTGATAAGATTCTTCATTTGCTTTTGGCAAGCTTAATGGAGAATTCTCCTGTAATCAGGGCCAAGGCTTTACGAGCGGTCAGTATCATTGTAGAAGCTGATCCGCAGGTTTTAGGAGACAAACGCGTTCAGTCAGCTGTTGAAGGAAGGTTTTGTGATTCCGCAATTTCCGCTAGAGAAGCAGCACTGGAGCTTGTAGGAAGGCATATTGCTTCTCATCCTGATGTTGGTTTGAAGTATTTTGAGAAGGTTGCTGAGAGAATTAAAGATACTGGAGTAAGTGTTCGAAAGCGATCTATCAAAATCATACGAGATATGTGCGTTTCAAATGCAAACTTCTCCGAATTTACAAGTGCTTGCATTGCTATCATCTCCCGTATTAGTGATGATGAATCAAACATACAGGATATTGTTTGCAAGACATTTTATGAGTTCTGGTTTGAGGAACCTACAGGTTCACAAACTCAATTCTTTGGAGATGGTAGCTCTGTTCCATTGGAGGTGGCTAAAAAAACTGAACAGATCGTTCGCGAGATGTTGAGGAGGATGCCAAGTCACCAGCCTCTTGTGACGGTCATTAAACGCAACTTGGCCCTTGATTTTTTTCCACAATCAGCTAAAGCTGTTGGGATCAACCCTGCCTCACTTGCATCAGTACGCAAGCGCTGTGAGTTAATGTGCAAGTGCTTACTGGAAAAGATATTGCAGGTAGAGGAAATGAATATCCAGGAGGTAGAGAGGCGGGCACTTCCGTATGTGCTAGCTTTGCATGCATTCTGTGTTGTGGATCGATCCAAAGCTTTGTGCACCGGCTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000070 GO:0000122 GO:0000278 GO:0000280 GO:0000428 GO:0000819 GO:0001654 GO:0001655 GO:0001656 GO:0001822 GO:0003006 GO:0003007 GO:0003008 GO:0003151 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006355 GO:0006357 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0007064 GO:0007275 GO:0007399 GO:0007417 GO:0007420 GO:0007423 GO:0007507 GO:0007548 GO:0007600 GO:0007605 GO:0008022 GO:0008104 GO:0008150 GO:0009314 GO:0009628 GO:0009653 GO:0009790 GO:0009887 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009987 GO:0010165 GO:0010171 GO:0010212 GO:0010468 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010629 GO:0010638 GO:0010720 GO:0016043 GO:0016591 GO:0019219 GO:0019222 GO:0019899 GO:0019904 GO:0022008 GO:0022402 GO:0022414 GO:0030154 GO:0030326 GO:0030334 GO:0030335 GO:0030880 GO:0031056 GO:0031058 GO:0031063 GO:0031065 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032039 GO:0032116 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0032879 GO:0032991 GO:0033036 GO:0033043 GO:0033044 GO:0033365 GO:0033554 GO:0034085 GO:0034086 GO:0034088 GO:0034502 GO:0034613 GO:0035107 GO:0035108 GO:0035112 GO:0035113 GO:0035115 GO:0035136 GO:0035239 GO:0035261 GO:0035295 GO:0040007 GO:0040008 GO:0040012 GO:0040017 GO:0042471 GO:0042634 GO:0042826 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043388 GO:0043583 GO:0044093 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045595 GO:0045597 GO:0045892 GO:0045934 GO:0045995 GO:0047485 GO:0048285 GO:0048513 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048546 GO:0048557 GO:0048562 GO:0048565 GO:0048566 GO:0048568 GO:0048589 GO:0048592 GO:0048598 GO:0048608 GO:0048638 GO:0048699 GO:0048731 GO:0048736 GO:0048806 GO:0048856 GO:0048869 GO:0050767 GO:0050769 GO:0050789 GO:0050793 GO:0050794 GO:0050877 GO:0050890 GO:0050896 GO:0050954 GO:0051094 GO:0051098 GO:0051099 GO:0051101 GO:0051128 GO:0051130 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051239 GO:0051240 GO:0051246 GO:0051247 GO:0051252 GO:0051253 GO:0051270 GO:0051272 GO:0051276 GO:0051641 GO:0051716 GO:0051960 GO:0051962 GO:0055029 GO:0055123 GO:0060065 GO:0060173 GO:0060255 GO:0060284 GO:0060322 GO:0060323 GO:0060324 GO:0060325 GO:0061008 GO:0061010 GO:0061038 GO:0061458 GO:0061695 GO:0065007 GO:0065009 GO:0070013 GO:0070087 GO:0070727 GO:0071168 GO:0071214 GO:0071478 GO:0071479 GO:0071481 GO:0071840 GO:0071921 GO:0072001 GO:0072359 GO:0080090 GO:0090311 GO:0090312 GO:0090596 GO:0090694 GO:0098813 GO:0104004 GO:0140014 GO:1902275 GO:1902494 GO:1902679 GO:1903047 GO:1903506 GO:1903507 GO:1905269 GO:1990234 GO:2000026 GO:2000112 GO:2000113 GO:2000145 GO:2000147 GO:2001141 GO:2001222 GO:2001224 GO:2001252
KEGG Pathways
Metabolic & Signaling
ko04111 map04111
Pfam Domains
Protein Families
Cohesin_HEAT Nipped-B_C PHD

Protein Analysis

774

Amino Acids

87.35

Weight (kDa)

8.47

Isoelectric Point (pI)

51.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PHD PF00628 329 - 373 1.7e-06 PHD-finger
Cohesin_HEAT PF12765 526 - 567 1.1e-12 HEAT repeat associated with sister chromatid cohesion
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0010273)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G15540 AT5G15540
fragaria_vesca FvH4_6g47080 FvH4_6g47080 FvH4_6g47080
malus_domestica MD09G1064300.v1.1 MD17G1057600.v1.1
prunus_persica Prupe.3G256700_v2.0.a1
pyrus_communis pycom111g05400 pycom17g05770
rosa_chinensis RchiOBHm_Chr2g0166131
rosa_laevigata RLG00000021588
rosa_multiflora Rmu_sc0006218.1_g000028
rosa_roxburghii Rroxscaffold_2G00085180
rosa_rugosa Rorug02G0520500 Rorug02G0520600
rosa_samantha Rh2AG586600 Rh2BG598400 Rh2CG569100 Rh2DG608300
rosa_wichuraiana Rw2G048900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1600, 2200
AccBSI CCGCTC 1 cut(s) 1580
AccII CGCG 2 cut(s) 1629, 2034
AciI CCGC 5 cut(s) 1580, 1607, 1665, 1674, 2245
AclWI GGATC 6 cut(s) 14, 1197, 1598, 2141, 2289, 2298
AcsI RAATTY 4 cut(s) 98, 748, 1546, 1847
AcuI CTGAAG 7 cut(s) 179, 350, 644, 678, 753, 917, 1236
AfaI GTAC 4 cut(s) 657, 1340, 1376, 2160
AfeI AGCGCT 2 cut(s) 665, 2168
AfiI CCNNNNNNNGG 2 cut(s) 608, 1730
AflIII ACRYGT 1 cut(s) 1627
AhlI ACTAGT 1 cut(s) 274
AjnI CCWGG 1 cut(s) 2229
AleI CACNNNNGTG 2 cut(s) 386, 522
AloI GAACNNNNNNTCC 2 cut(s) 1770, 1802
Alw21I GWGCWC 2 cut(s) 209, 2312
Alw26I GTCTC 5 cut(s) 115, 175, 433, 972, 1614
Alw44I GTGCAC 2 cut(s) 205, 2308
AlwI GGATC 6 cut(s) 14, 1197, 1598, 2141, 2289, 2298
Aor51HI AGCGCT 2 cut(s) 665, 2168
AoxI GGCC 3 cut(s) 44, 1563, 2094
ApaLI GTGCAC 2 cut(s) 205, 2308
ApeKI GCWGC 6 cut(s) 176, 620, 839, 878, 1303, 1685
ApoI RAATTY 4 cut(s) 98, 748, 1546, 1847
AseI ATTAAT 1 cut(s) 401
Asp700I GAANNNNTTC 3 cut(s) 402, 1198, 1407
AspLEI GCGC 2 cut(s) 666, 2169
AspS9I GGNCC 2 cut(s) 1563, 2095
AsuHPI GGTGA 2 cut(s) 446, 2051
AsuII TTCGAA 2 cut(s) 1352, 1789
AsuNHI GCTAGC 1 cut(s) 2263
AxyI CCTNAGG 1 cut(s) 1242
BaeGI GKGCMC 3 cut(s) 209, 2251, 2312
BaeI ACNNNNGTAYC 2 cut(s) 1764, 1797
BarI GAAGNNNNNNTAC 2 cut(s) 1358, 1390
BauI CACGAG 2 cut(s) 614, 651
Bbv12I GWGCWC 2 cut(s) 209, 2312
BbvI GCAGC 6 cut(s) 163, 632, 826, 865, 1315, 1697
BccI CCATC 7 cut(s) 31, 251, 706, 947, 995, 1292, 1976
BcgI CGANNNNNNTGC 2 cut(s) 1803, 1837
BciT130I CCWGG 1 cut(s) 2231
BciVI GTATCC 1 cut(s) 921
BclI TGATCA 3 cut(s) 345, 489, 961
BcoDI GTCTC 5 cut(s) 115, 175, 433, 972, 1614
BcuI ACTAGT 1 cut(s) 274
BfaI CTAG 4 cut(s) 275, 1386, 1677, 2264
BfmI CTRYAG 4 cut(s) 520, 855, 1123, 1953
BfoI RGCGCY 2 cut(s) 667, 2170
BfuAI ACCTGC 2 cut(s) 1600, 2200
BfuI GTATCC 1 cut(s) 921
BisI GCNGC 6 cut(s) 177, 621, 840, 879, 1304, 1686
BlpI GCTNAGC 1 cut(s) 106
BlsI GCNGC 6 cut(s) 178, 622, 841, 880, 1305, 1687
Bme1390I CCNGG 1 cut(s) 2231
BmgT120I GGNCC 2 cut(s) 1563, 2095
BmiI GGNNCC 1 cut(s) 1950
BmrFI CCNGG 1 cut(s) 2231
BmsI GCATC 4 cut(s) 82, 385, 2040, 2162
BmtI GCTAGC 1 cut(s) 2267
BpmI CTGGAG 5 cut(s) 791, 803, 1480, 1712, 1797
Bpu1102I GCTNAGC 1 cut(s) 106
Bpu14I TTCGAA 2 cut(s) 1352, 1789
BpuEI CTTGAG 1 cut(s) 209
Bsa29I ATCGAT 3 cut(s) 18, 729, 2293
BsaI GGTCTC 1 cut(s) 175
BsaJI CCNNGG 1 cut(s) 1566
BsaXI ACNNNNNCTCC 4 cut(s) 1478, 1508, 1770, 1800
Bsc4I CCNNNNNNNGG 2 cut(s) 608, 1730
Bse118I RCCGGY 1 cut(s) 2312
Bse1I ACTGG 5 cut(s) 425, 1429, 1695, 1780, 2199
Bse21I CCTNAGG 1 cut(s) 1242
Bse3DI GCAATG 2 cut(s) 342, 1863
BseBI CCWGG 1 cut(s) 2231
BseCI ATCGAT 3 cut(s) 18, 729, 2293
BseDI CCNNGG 1 cut(s) 1566
BseGI GGATG 3 cut(s) 1351, 1720, 2055
BseLI CCNNNNNNNGG 2 cut(s) 608, 1730
BseMI GCAATG 2 cut(s) 342, 1863
BseMII CTCAG 6 cut(s) 120, 386, 698, 1002, 1233, 1749
BseNI ACTGG 5 cut(s) 425, 1429, 1695, 1780, 2199
BseRI GAGGAG 1 cut(s) 2059
BseSI GKGCMC 3 cut(s) 209, 2251, 2312
BseXI GCAGC 6 cut(s) 163, 632, 826, 865, 1315, 1697
BseYI CCCAGC 1 cut(s) 815
BsgI GTGCAG 2 cut(s) 167, 825
Bsh1236I CGCG 2 cut(s) 1629, 2034
BshFI GGCC 3 cut(s) 46, 1565, 2096
BshVI ATCGAT 3 cut(s) 18, 729, 2293
BsiHKAI GWGCWC 2 cut(s) 209, 2312
BsiSI CCGG 2 cut(s) 764, 2313
BslFI GGGAC 2 cut(s) 929, 1435
BslI CCNNNNNNNGG 2 cut(s) 608, 1730
BsmAI GTCTC 5 cut(s) 115, 175, 433, 972, 1614
BsmBI CGTCTC 2 cut(s) 115, 972
BsmFI GGGAC 2 cut(s) 929, 1435
BsmI GAATGC 2 cut(s) 817, 2276
BsnI GGCC 3 cut(s) 46, 1565, 2096
Bso31I GGTCTC 1 cut(s) 175
Bsp119I TTCGAA 2 cut(s) 1352, 1789
Bsp1286I GDGCHC 3 cut(s) 209, 2251, 2312
Bsp1720I GCTNAGC 1 cut(s) 106
Bsp68I TCGCGA 1 cut(s) 2034
BspACI CCGC 5 cut(s) 1580, 1607, 1665, 1674, 2245
BspANI GGCC 3 cut(s) 46, 1565, 2096
BspCNI CTCAG 6 cut(s) 119, 385, 697, 1001, 1234, 1750
BspDI ATCGAT 3 cut(s) 18, 729, 2293
BspFNI CGCG 2 cut(s) 1629, 2034
BspLI GGNNCC 1 cut(s) 1950
BspMAI CTGCAG 1 cut(s) 1127
BspMI ACCTGC 2 cut(s) 1600, 2200
BspOI GCTAGC 1 cut(s) 2267
BspPI GGATC 6 cut(s) 14, 1197, 1598, 2141, 2289, 2298
BspQI GCTCTTC 2 cut(s) 78, 462
BspT104I TTCGAA 2 cut(s) 1352, 1789
BspTNI GGTCTC 1 cut(s) 175
BsrBI CCGCTC 1 cut(s) 1580
BsrDI GCAATG 2 cut(s) 342, 1863
BsrFI RCCGGY 1 cut(s) 2312
BsrI ACTGG 5 cut(s) 425, 1429, 1695, 1780, 2199
BssAI RCCGGY 1 cut(s) 2312
BssECI CCNNGG 1 cut(s) 1566
BssSI CACGAG 2 cut(s) 614, 651
BssT1I CCWWGG 1 cut(s) 1566
Bst2BI CACGAG 2 cut(s) 614, 651
Bst2UI CCWGG 1 cut(s) 2231
Bst4CI ACNGT 4 cut(s) 139, 1109, 1157, 2077
Bst6I CTCTTC 3 cut(s) 78, 113, 462
BstBI TTCGAA 2 cut(s) 1352, 1789
BstC8I GCNNGC 9 cut(s) 112, 438, 985, 1534, 1861, 2165, 2247, 2265, 2274
BstDEI CTNAG 7 cut(s) 106, 372, 574, 684, 988, 1242, 1758
BstF5I GGATG 3 cut(s) 1351, 1720, 2055
BstFNI CGCG 2 cut(s) 1629, 2034
BstH2I RGCGCY 2 cut(s) 667, 2170
BstHHI GCGC 2 cut(s) 666, 2169
BstMAI GTCTC 5 cut(s) 115, 175, 433, 972, 1614
BstNI CCWGG 1 cut(s) 2231
BstNSI RCATGY 4 cut(s) 288, 636, 987, 2276
BstSCI CCNGG 1 cut(s) 2229
BstSFI CTRYAG 4 cut(s) 520, 855, 1123, 1953
BstSLI GKGCMC 3 cut(s) 209, 2251, 2312
BstUI CGCG 2 cut(s) 1629, 2034
BstV1I GCAGC 6 cut(s) 163, 632, 826, 865, 1315, 1697
BstXI CCANNNNNNTGG 1 cut(s) 815
Bsu15I ATCGAT 3 cut(s) 18, 729, 2293
Bsu36I CCTNAGG 1 cut(s) 1242
BsuI GTATCC 1 cut(s) 921
BsuRI GGCC 3 cut(s) 46, 1565, 2096
BsuTUI ATCGAT 3 cut(s) 18, 729, 2293
BtgZI GCGATG 1 cut(s) 362
BtsCI GGATG 3 cut(s) 1351, 1720, 2055
BtsI GCAGTG 1 cut(s) 492
BtsIMutI CAGTG 5 cut(s) 355, 492, 1105, 1212, 1688
BtuMI TCGCGA 1 cut(s) 2034
BveI ACCTGC 2 cut(s) 1600, 2200
Cac8I GCNNGC 9 cut(s) 112, 438, 985, 1534, 1861, 2165, 2247, 2265, 2274
CfoI GCGC 2 cut(s) 666, 2169
Cfr10I RCCGGY 1 cut(s) 2312
Cfr13I GGNCC 2 cut(s) 1563, 2095
ClaI ATCGAT 3 cut(s) 18, 729, 2293
CseI GACGC 3 cut(s) 132, 784, 989
Csp6I GTAC 4 cut(s) 656, 1339, 1375, 2159
CviAII CATG 6 cut(s) 285, 633, 984, 1055, 1372, 2273
CviQI GTAC 4 cut(s) 656, 1339, 1375, 2159
DdeI CTNAG 7 cut(s) 106, 372, 574, 684, 988, 1242, 1758
Eam1104I CTCTTC 3 cut(s) 78, 113, 462
EarI CTCTTC 3 cut(s) 78, 113, 462
Eco130I CCWWGG 1 cut(s) 1566
Eco31I GGTCTC 1 cut(s) 175
Eco47III AGCGCT 2 cut(s) 665, 2168
Eco57I CTGAAG 7 cut(s) 179, 350, 644, 678, 753, 917, 1236
Eco81I CCTNAGG 1 cut(s) 1242
EcoRI GAATTC 1 cut(s) 1546
EcoRII CCWGG 1 cut(s) 2229
EcoT14I CCWWGG 1 cut(s) 1566
EcoT22I ATGCAT 1 cut(s) 2278
ErhI CCWWGG 1 cut(s) 1566
Esp3I CGTCTC 2 cut(s) 115, 972
FaeI CATG 6 cut(s) 288, 636, 987, 1058, 1375, 2276
FaqI GGGAC 2 cut(s) 929, 1435
FatI CATG 6 cut(s) 284, 632, 983, 1054, 1371, 2272
FauI CCCGC 1 cut(s) 2238
FauNDI CATATG 1 cut(s) 385
FbaI TGATCA 3 cut(s) 345, 489, 961
Fnu4HI GCNGC 6 cut(s) 177, 621, 840, 879, 1304, 1686
FokI GGATG 3 cut(s) 1358, 1707, 2062
Fsp4HI GCNGC 6 cut(s) 177, 621, 840, 879, 1304, 1686
FspBI CTAG 4 cut(s) 275, 1386, 1677, 2264
GlaI GCGC 2 cut(s) 665, 2168
GluI GCNGC 6 cut(s) 177, 621, 840, 879, 1304, 1686
GsaI CCCAGC 1 cut(s) 819
GsuI CTGGAG 5 cut(s) 791, 803, 1480, 1712, 1797
HaeII RGCGCY 2 cut(s) 667, 2170
HaeIII GGCC 3 cut(s) 46, 1565, 2096
HapII CCGG 2 cut(s) 764, 2313
HgaI GACGC 3 cut(s) 132, 784, 989
HhaI GCGC 2 cut(s) 666, 2169
Hin1II CATG 6 cut(s) 288, 636, 987, 1058, 1375, 2276
Hin6I GCGC 2 cut(s) 664, 2167
HinP1I GCGC 2 cut(s) 664, 2167
HindIII AAGCTT 3 cut(s) 690, 1534, 2301
HpaII CCGG 2 cut(s) 764, 2313
HphI GGTGA 2 cut(s) 446, 2051
Hpy166II GTNNAC 6 cut(s) 207, 221, 517, 656, 1961, 2310
Hpy188I TCNGA 9 cut(s) 198, 256, 486, 697, 966, 1044, 1113, 1846, 2321
Hpy8I GTNNAC 6 cut(s) 207, 221, 517, 656, 1961, 2310
HpyAV CCTTC 9 cut(s) 325, 542, 872, 1172, 1283, 1640, 1644, 1698, 1744
HpyCH4III ACNGT 4 cut(s) 139, 1109, 1157, 2077
HpyCH4IV ACGT 2 cut(s) 834, 844
HpyF3I CTNAG 7 cut(s) 106, 372, 574, 684, 988, 1242, 1758
HpySE526I ACGT 2 cut(s) 834, 844
Hsp92II CATG 6 cut(s) 288, 636, 987, 1058, 1375, 2276
HspAI GCGC 2 cut(s) 664, 2167
Ksp22I TGATCA 3 cut(s) 345, 489, 961
LguI GCTCTTC 2 cut(s) 78, 462
LmnI GCTCC 2 cut(s) 778, 1693
Lsp1109I GCAGC 6 cut(s) 163, 632, 826, 865, 1315, 1697
LweI GCATC 4 cut(s) 82, 385, 2040, 2162
MaeI CTAG 4 cut(s) 275, 1386, 1677, 2264
MaeII ACGT 2 cut(s) 834, 844
MaeIII GTNAC 7 cut(s) 611, 638, 801, 947, 1161, 2057, 2071
MbiI CCGCTC 1 cut(s) 1580
MboII GAAGA 7 cut(s) 89, 95, 130, 185, 479, 1218, 1508
MfeI CAATTG 1 cut(s) 873
MhlI GDGCHC 3 cut(s) 209, 2251, 2312
MluI ACGCGT 1 cut(s) 1627
MlyI GAGTC 2 cut(s) 643, 676
MmeI TCCRAC 2 cut(s) 626, 1276
Mph1103I ATGCAT 1 cut(s) 2278
MroXI GAANNNNTTC 3 cut(s) 402, 1198, 1407
MseI TTAA 8 cut(s) 162, 239, 401, 545, 1538, 1767, 2082, 2177
MslI CAYNNNNRTG 3 cut(s) 386, 522, 1725
MspA1I CMGCKG 2 cut(s) 1292, 1640
MspI CCGG 2 cut(s) 764, 2313
MspR9I CCNGG 1 cut(s) 2231
MunI CAATTG 1 cut(s) 873
Mva1269I GAATGC 2 cut(s) 817, 2276
MvaI CCWGG 1 cut(s) 2231
MvnI CGCG 2 cut(s) 1629, 2034
NdeI CATATG 1 cut(s) 385
NheI GCTAGC 1 cut(s) 2263
NlaIII CATG 6 cut(s) 288, 636, 987, 1058, 1375, 2276
NlaIV GGNNCC 1 cut(s) 1950
NmeAIII GCCGAG 1 cut(s) 846
NmuCI GTSAC 6 cut(s) 611, 638, 947, 1161, 2057, 2071
NruI TCGCGA 1 cut(s) 2034
NsiI ATGCAT 1 cut(s) 2278
NspI RCATGY 4 cut(s) 288, 636, 987, 2276
NspV TTCGAA 2 cut(s) 1352, 1789
OliI CACNNNNGTG 2 cut(s) 386, 522
PaeI GCATGC 2 cut(s) 987, 2276
PciSI GCTCTTC 2 cut(s) 78, 462
PctI GAATGC 2 cut(s) 817, 2276
PdmI GAANNNNTTC 3 cut(s) 402, 1198, 1407
PfoI TCCNGGA 1 cut(s) 2229
PkrI GCNGC 6 cut(s) 178, 622, 841, 880, 1305, 1687
PleI GAGTC 2 cut(s) 643, 676
PpsI GAGTC 2 cut(s) 643, 676
PshBI ATTAAT 1 cut(s) 401
Psp6I CCWGG 1 cut(s) 2229
PspFI CCCAGC 1 cut(s) 815
PspGI CCWGG 1 cut(s) 2229
PspN4I GGNNCC 1 cut(s) 1950
PspPI GGNCC 2 cut(s) 1563, 2095
PstI CTGCAG 1 cut(s) 1127
PvuII CAGCTG 2 cut(s) 1292, 1640
RruI TCGCGA 1 cut(s) 2034
RsaI GTAC 4 cut(s) 657, 1340, 1376, 2160
RsaNI GTAC 4 cut(s) 656, 1339, 1375, 2159
RseI CAYNNNNRTG 3 cut(s) 386, 522, 1725
SapI GCTCTTC 2 cut(s) 78, 462
SaqAI TTAA 8 cut(s) 162, 239, 401, 545, 1538, 1767, 2082, 2177
SatI GCNGC 6 cut(s) 177, 621, 840, 879, 1304, 1686
Sau96I GGNCC 2 cut(s) 1563, 2095
SchI GAGTC 2 cut(s) 643, 676
ScrFI CCNGG 1 cut(s) 2231
SduI GDGCHC 3 cut(s) 209, 2251, 2312
SfaNI GCATC 4 cut(s) 82, 385, 2040, 2162
SfcI CTRYAG 4 cut(s) 520, 855, 1123, 1953
SfuI TTCGAA 2 cut(s) 1352, 1789
SmiMI CAYNNNNRTG 3 cut(s) 386, 522, 1725
SmlI CTYRAG 1 cut(s) 224
SmoI CTYRAG 1 cut(s) 224
SpeI ACTAGT 1 cut(s) 274
SphI GCATGC 2 cut(s) 987, 2276
SsiI CCGC 5 cut(s) 1580, 1607, 1665, 1674, 2245
SspI AATATT 1 cut(s) 190
SspMI CTAG 4 cut(s) 275, 1386, 1677, 2264
StyD4I CCNGG 1 cut(s) 2229
StyI CCWWGG 1 cut(s) 1566
TaaI ACNGT 4 cut(s) 139, 1109, 1157, 2077
TaiI ACGT 2 cut(s) 837, 847
TaqI TCGA 8 cut(s) 18, 66, 729, 1096, 1192, 1352, 1789, 2293
TatI WGTACW 2 cut(s) 655, 1374
Tru1I TTAA 8 cut(s) 162, 239, 401, 545, 1538, 1767, 2082, 2177
Tru9I TTAA 8 cut(s) 162, 239, 401, 545, 1538, 1767, 2082, 2177
TscAI CASTG 5 cut(s) 355, 499, 1112, 1219, 1695
TseFI GTSAC 6 cut(s) 611, 638, 947, 1161, 2057, 2071
TseI GCWGC 6 cut(s) 176, 620, 839, 878, 1303, 1685
Tsp45I GTSAC 6 cut(s) 611, 638, 947, 1161, 2057, 2071
TspGWI ACGGA 1 cut(s) 2244
TspRI CASTG 5 cut(s) 355, 499, 1112, 1219, 1695
VneI GTGCAC 2 cut(s) 205, 2308
VspI ATTAAT 1 cut(s) 401
XapI RAATTY 4 cut(s) 98, 748, 1546, 1847
XceI RCATGY 4 cut(s) 288, 636, 987, 2276
XcmI CCANNNNNNNNNTGG 1 cut(s) 1098
XmnI GAANNNNTTC 3 cut(s) 402, 1198, 1407
XspI CTAG 4 cut(s) 275, 1386, 1677, 2264
Zsp2I ATGCAT 1 cut(s) 2278
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.