exocyst complex component
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G29400 |
| fragaria_vesca | FvH4_6g46900 |
| malus_domestica | MD09G1066500.v1.1 MD17G1059100.v1.1 MD17G1059400.v1.1 MD17G1059500.v1.1 MD17G1059600.v1.1 |
| prunus_persica | Prupe.3G255100_v2.0.a1 Prupe.3G255100_v2.0.a1 |
| pyrus_communis | pycom111g05580 pycom14g07030 pycom17g05930 |
| rosa_chinensis | RchiOBHm_Chr2g0165871 |
| rosa_laevigata | RLG00000021563 |
| rosa_multiflora | Rmu_co8505119.1_g000002 |
| rosa_roxburghii | Rroxscaffold_2G00085400 |
| rosa_rugosa | Rorug02G0518500 |
| rosa_samantha | Rh2AG584400 Rh2BG596200 Rh2CG567100 Rh2DG606000 |
| rosa_wichuraiana | Rw2G048720 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 143 |
| AccIII | TCCGGA | 2 cut(s) | 637, 1783 |
| AciI | CCGC | 5 cut(s) | 65, 530, 1027, 1726, 1904 |
| AclWI | GGATC | 7 cut(s) | 254, 1488, 1781, 1794, 1938, 1938, 1951 |
| AcsI | RAATTY | 8 cut(s) | 670, 817, 976, 1172, 1398, 1693, 1812, 1963 |
| AcuI | CTGAAG | 1 cut(s) | 815 |
| AfaI | GTAC | 3 cut(s) | 458, 1526, 1898 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 37, 733, 1012, 1217, 1974 |
| AflIII | ACRYGT | 2 cut(s) | 498, 1038 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1462 |
| AjnI | CCWGG | 2 cut(s) | 1390, 1466 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1910, 1942 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 434, 466, 1007, 1039 |
| Alw21I | GWGCWC | 4 cut(s) | 409, 498, 657, 707 |
| Alw26I | GTCTC | 3 cut(s) | 306, 1280, 1566 |
| Alw44I | GTGCAC | 1 cut(s) | 703 |
| AlwI | GGATC | 7 cut(s) | 254, 1488, 1781, 1794, 1938, 1938, 1951 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 775, 973 |
| Ama87I | CYCGRG | 1 cut(s) | 491 |
| Aor13HI | TCCGGA | 2 cut(s) | 637, 1783 |
| AoxI | GGCC | 1 cut(s) | 1000 |
| ApaLI | GTGCAC | 1 cut(s) | 703 |
| ApeKI | GCWGC | 4 cut(s) | 62, 964, 967, 1728 |
| ApoI | RAATTY | 8 cut(s) | 670, 817, 976, 1172, 1398, 1693, 1812, 1963 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1864 |
| AspLEI | GCGC | 1 cut(s) | 1184 |
| AspS9I | GGNCC | 2 cut(s) | 1001, 1560 |
| AsuC2I | CCSGG | 1 cut(s) | 32 |
| AsuHPI | GGTGA | 4 cut(s) | 128, 995, 1157, 1231 |
| AsuII | TTCGAA | 2 cut(s) | 1746, 1868 |
| AvaI | CYCGRG | 1 cut(s) | 491 |
| AvaII | GGWCC | 1 cut(s) | 1560 |
| BaeGI | GKGCMC | 1 cut(s) | 707 |
| BamHI | GGATCC | 2 cut(s) | 1786, 1943 |
| BanI | GGYRCC | 1 cut(s) | 143 |
| BanII | GRGCYC | 4 cut(s) | 293, 409, 657, 812 |
| BauI | CACGAG | 1 cut(s) | 1348 |
| BbsI | GAAGAC | 2 cut(s) | 1163, 1867 |
| Bbv12I | GWGCWC | 4 cut(s) | 409, 498, 657, 707 |
| BbvCI | CCTCAGC | 1 cut(s) | 1791 |
| BbvI | GCAGC | 4 cut(s) | 49, 951, 979, 1740 |
| BccI | CCATC | 9 cut(s) | 107, 157, 179, 527, 562, 728, 793, 828, 1655 |
| BceAI | ACGGC | 2 cut(s) | 441, 1591 |
| BcgI | CGANNNNNNTGC | 8 cut(s) | 41, 75, 75, 109, 1058, 1092, 1295, 1329 |
| BciT130I | CCWGG | 2 cut(s) | 1392, 1468 |
| BclI | TGATCA | 2 cut(s) | 265, 694 |
| BcnI | CCSGG | 1 cut(s) | 32 |
| BcoDI | GTCTC | 3 cut(s) | 306, 1280, 1566 |
| BfaI | CTAG | 3 cut(s) | 435, 872, 1635 |
| BfmI | CTRYAG | 1 cut(s) | 965 |
| BfoI | RGCGCY | 1 cut(s) | 1185 |
| BglII | AGATCT | 3 cut(s) | 852, 1631, 1752 |
| BisI | GCNGC | 5 cut(s) | 63, 66, 965, 968, 1729 |
| BlpI | GCTNAGC | 2 cut(s) | 776, 890 |
| BlsI | GCNGC | 5 cut(s) | 64, 67, 966, 969, 1730 |
| Bme1390I | CCNGG | 3 cut(s) | 32, 1392, 1468 |
| Bme18I | GGWCC | 1 cut(s) | 1560 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1462 |
| BmeT110I | CYCGRG | 1 cut(s) | 491 |
| BmgT120I | GGNCC | 2 cut(s) | 1001, 1560 |
| BmiI | GGNNCC | 6 cut(s) | 145, 811, 1003, 1724, 1788, 1945 |
| BmrFI | CCNGG | 3 cut(s) | 32, 1392, 1468 |
| BmsI | GCATC | 5 cut(s) | 956, 1066, 1199, 1309, 1829 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1350 |
| BpiI | GAAGAC | 2 cut(s) | 1163, 1867 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 737, 769, 794, 826 |
| BpmI | CTGGAG | 4 cut(s) | 326, 461, 1239, 1374 |
| Bpu10I | CCTNAGC | 3 cut(s) | 651, 1583, 1791 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 776, 890 |
| Bpu14I | TTCGAA | 2 cut(s) | 1746, 1868 |
| BpuEI | CTTGAG | 2 cut(s) | 1282, 1697 |
| BpuMI | CCSGG | 1 cut(s) | 32 |
| Bsa29I | ATCGAT | 1 cut(s) | 1483 |
| BsaI | GGTCTC | 1 cut(s) | 1280 |
| BsaWI | WCCGGW | 3 cut(s) | 637, 1012, 1783 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 434, 464, 1372, 1402 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 37, 733, 1012, 1217, 1974 |
| Bse3DI | GCAATG | 3 cut(s) | 435, 663, 1185 |
| BseAI | TCCGGA | 2 cut(s) | 637, 1783 |
| BseBI | CCWGG | 2 cut(s) | 1392, 1468 |
| BseCI | ATCGAT | 1 cut(s) | 1483 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 37, 733, 1012, 1217, 1974 |
| BseMI | GCAATG | 3 cut(s) | 435, 663, 1185 |
| BseMII | CTCAG | 9 cut(s) | 184, 642, 670, 767, 904, 1374, 1547, 1547, 1805 |
| BseRI | GAGGAG | 4 cut(s) | 341, 1236, 1382, 1682 |
| BseSI | GKGCMC | 1 cut(s) | 707 |
| BseXI | GCAGC | 4 cut(s) | 49, 951, 979, 1740 |
| BshFI | GGCC | 1 cut(s) | 1002 |
| BshNI | GGYRCC | 1 cut(s) | 143 |
| BshVI | ATCGAT | 1 cut(s) | 1483 |
| BsiHKAI | GWGCWC | 4 cut(s) | 409, 498, 657, 707 |
| BsiHKCI | CYCGRG | 1 cut(s) | 491 |
| BsiSI | CCGG | 4 cut(s) | 32, 638, 1013, 1784 |
| BslFI | GGGAC | 2 cut(s) | 180, 1668 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 37, 733, 1012, 1217, 1974 |
| BsmAI | GTCTC | 3 cut(s) | 306, 1280, 1566 |
| BsmBI | CGTCTC | 1 cut(s) | 1566 |
| BsmFI | GGGAC | 2 cut(s) | 180, 1668 |
| BsmI | GAATGC | 3 cut(s) | 53, 1029, 1674 |
| BsnI | GGCC | 1 cut(s) | 1002 |
| Bso31I | GGTCTC | 1 cut(s) | 1280 |
| BsoBI | CYCGRG | 1 cut(s) | 491 |
| Bsp119I | TTCGAA | 2 cut(s) | 1746, 1868 |
| Bsp1286I | GDGCHC | 6 cut(s) | 293, 409, 498, 657, 707, 812 |
| Bsp13I | TCCGGA | 2 cut(s) | 637, 1783 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 776, 890 |
| BspACI | CCGC | 5 cut(s) | 65, 530, 1027, 1726, 1904 |
| BspANI | GGCC | 1 cut(s) | 1002 |
| BspCNI | CTCAG | 9 cut(s) | 183, 643, 669, 768, 903, 1373, 1546, 1548, 1804 |
| BspDI | ATCGAT | 1 cut(s) | 1483 |
| BspEI | TCCGGA | 2 cut(s) | 637, 1783 |
| BspHI | TCATGA | 2 cut(s) | 249, 1123 |
| BspLI | GGNNCC | 6 cut(s) | 145, 811, 1003, 1724, 1788, 1945 |
| BspMAI | CTGCAG | 1 cut(s) | 969 |
| BspPI | GGATC | 7 cut(s) | 254, 1488, 1781, 1794, 1938, 1938, 1951 |
| BspT104I | TTCGAA | 2 cut(s) | 1746, 1868 |
| BspT107I | GGYRCC | 1 cut(s) | 143 |
| BspTNI | GGTCTC | 1 cut(s) | 1280 |
| BsrDI | GCAATG | 3 cut(s) | 435, 663, 1185 |
| BssSI | CACGAG | 1 cut(s) | 1348 |
| Bst2BI | CACGAG | 1 cut(s) | 1348 |
| Bst2UI | CCWGG | 2 cut(s) | 1392, 1468 |
| Bst4CI | ACNGT | 4 cut(s) | 1313, 1524, 1852, 1901 |
| Bst6I | CTCTTC | 4 cut(s) | 441, 1307, 1743, 1940 |
| BstBI | TTCGAA | 2 cut(s) | 1746, 1868 |
| BstC8I | GCNNGC | 6 cut(s) | 707, 711, 877, 1053, 1580, 1614 |
| BstH2I | RGCGCY | 1 cut(s) | 1185 |
| BstHHI | GCGC | 1 cut(s) | 1184 |
| BstMAI | GTCTC | 3 cut(s) | 306, 1280, 1566 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1085, 1094 |
| BstNI | CCWGG | 2 cut(s) | 1392, 1468 |
| BstNSI | RCATGY | 3 cut(s) | 463, 502, 1042 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1350 |
| BstSCI | CCNGG | 3 cut(s) | 30, 1390, 1466 |
| BstSFI | CTRYAG | 1 cut(s) | 965 |
| BstSLI | GKGCMC | 1 cut(s) | 707 |
| BstV1I | GCAGC | 4 cut(s) | 49, 951, 979, 1740 |
| BstV2I | GAAGAC | 2 cut(s) | 1163, 1867 |
| BstX2I | RGATCY | 6 cut(s) | 852, 1631, 1752, 1786, 1930, 1943 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 163 |
| BstYI | RGATCY | 6 cut(s) | 852, 1631, 1752, 1786, 1930, 1943 |
| Bsu15I | ATCGAT | 1 cut(s) | 1483 |
| BsuRI | GGCC | 1 cut(s) | 1002 |
| BsuTUI | ATCGAT | 1 cut(s) | 1483 |
| BtsIMutI | CAGTG | 5 cut(s) | 178, 214, 1318, 1380, 1906 |
| Cac8I | GCNNGC | 6 cut(s) | 707, 711, 877, 1053, 1580, 1614 |
| CaiI | CAGNNNCTG | 2 cut(s) | 775, 973 |
| CciI | TCATGA | 2 cut(s) | 249, 1123 |
| CfoI | GCGC | 1 cut(s) | 1184 |
| Cfr13I | GGNCC | 2 cut(s) | 1001, 1560 |
| ClaI | ATCGAT | 1 cut(s) | 1483 |
| CseI | GACGC | 1 cut(s) | 594 |
| Csp6I | GTAC | 3 cut(s) | 457, 1525, 1897 |
| CviQI | GTAC | 3 cut(s) | 457, 1525, 1897 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1462 |
| Eam1104I | CTCTTC | 4 cut(s) | 441, 1307, 1743, 1940 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1462 |
| EarI | CTCTTC | 4 cut(s) | 441, 1307, 1743, 1940 |
| Ecl136II | GAGCTC | 2 cut(s) | 407, 655 |
| Eco24I | GRGCYC | 4 cut(s) | 293, 409, 657, 812 |
| Eco31I | GGTCTC | 1 cut(s) | 1280 |
| Eco47I | GGWCC | 1 cut(s) | 1560 |
| Eco53kI | GAGCTC | 2 cut(s) | 407, 655 |
| Eco57I | CTGAAG | 1 cut(s) | 815 |
| Eco88I | CYCGRG | 1 cut(s) | 491 |
| EcoICRI | GAGCTC | 2 cut(s) | 407, 655 |
| EcoRI | GAATTC | 1 cut(s) | 817 |
| EcoRII | CCWGG | 2 cut(s) | 1390, 1466 |
| EcoT38I | GRGCYC | 4 cut(s) | 293, 409, 657, 812 |
| Esp3I | CGTCTC | 1 cut(s) | 1566 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 210, 242, 1437, 1469 |
| FaqI | GGGAC | 2 cut(s) | 180, 1668 |
| FbaI | TGATCA | 2 cut(s) | 265, 694 |
| Fnu4HI | GCNGC | 5 cut(s) | 63, 66, 965, 968, 1729 |
| FriOI | GRGCYC | 4 cut(s) | 293, 409, 657, 812 |
| Fsp4HI | GCNGC | 5 cut(s) | 63, 66, 965, 968, 1729 |
| FspBI | CTAG | 3 cut(s) | 435, 872, 1635 |
| GlaI | GCGC | 1 cut(s) | 1183 |
| GluI | GCNGC | 5 cut(s) | 63, 66, 965, 968, 1729 |
| GsuI | CTGGAG | 4 cut(s) | 326, 461, 1239, 1374 |
| HaeII | RGCGCY | 1 cut(s) | 1185 |
| HaeIII | GGCC | 1 cut(s) | 1002 |
| HapII | CCGG | 4 cut(s) | 32, 638, 1013, 1784 |
| HgaI | GACGC | 1 cut(s) | 594 |
| HhaI | GCGC | 1 cut(s) | 1184 |
| Hin6I | GCGC | 1 cut(s) | 1182 |
| HinP1I | GCGC | 1 cut(s) | 1182 |
| HindIII | AAGCTT | 2 cut(s) | 711, 1839 |
| HpaII | CCGG | 4 cut(s) | 32, 638, 1013, 1784 |
| HphI | GGTGA | 4 cut(s) | 128, 995, 1157, 1231 |
| Hpy166II | GTNNAC | 1 cut(s) | 705 |
| Hpy8I | GTNNAC | 1 cut(s) | 705 |
| Hpy99I | CGWCG | 1 cut(s) | 610 |
| HpyAV | CCTTC | 3 cut(s) | 310, 1439, 1531 |
| HpyCH4III | ACNGT | 4 cut(s) | 1313, 1524, 1852, 1901 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1085, 1094 |
| HspAI | GCGC | 1 cut(s) | 1182 |
| Kpn2I | TCCGGA | 2 cut(s) | 637, 1783 |
| Ksp22I | TGATCA | 2 cut(s) | 265, 694 |
| LmnI | GCTCC | 4 cut(s) | 815, 910, 917, 1728 |
| Lsp1109I | GCAGC | 4 cut(s) | 49, 951, 979, 1740 |
| LweI | GCATC | 5 cut(s) | 956, 1066, 1199, 1309, 1829 |
| MaeI | CTAG | 3 cut(s) | 435, 872, 1635 |
| MaeIII | GTNAC | 2 cut(s) | 396, 1880 |
| MfeI | CAATTG | 2 cut(s) | 149, 682 |
| MflI | RGATCY | 6 cut(s) | 852, 1631, 1752, 1786, 1930, 1943 |
| MhlI | GDGCHC | 6 cut(s) | 293, 409, 498, 657, 707, 812 |
| MlyI | GAGTC | 6 cut(s) | 162, 308, 569, 1157, 1360, 1690 |
| MmeI | TCCRAC | 2 cut(s) | 588, 1619 |
| MroI | TCCGGA | 2 cut(s) | 637, 1783 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1864 |
| MseI | TTAA | 4 cut(s) | 228, 1293, 1542, 1653 |
| MspI | CCGG | 4 cut(s) | 32, 638, 1013, 1784 |
| MspR9I | CCNGG | 3 cut(s) | 32, 1392, 1468 |
| MunI | CAATTG | 2 cut(s) | 149, 682 |
| Mva1269I | GAATGC | 3 cut(s) | 53, 1029, 1674 |
| MvaI | CCWGG | 2 cut(s) | 1392, 1468 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1085, 1094 |
| NciI | CCSGG | 1 cut(s) | 32 |
| NlaIV | GGNNCC | 6 cut(s) | 145, 811, 1003, 1724, 1788, 1945 |
| NmuCI | GTSAC | 1 cut(s) | 1880 |
| NspI | RCATGY | 3 cut(s) | 463, 502, 1042 |
| NspV | TTCGAA | 2 cut(s) | 1746, 1868 |
| PagI | TCATGA | 2 cut(s) | 249, 1123 |
| PciI | ACATGT | 2 cut(s) | 498, 1038 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 48, 1346, 1420 |
| PctI | GAATGC | 3 cut(s) | 53, 1029, 1674 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1864 |
| PfeI | GAWTC | 6 cut(s) | 235, 284, 563, 1267, 1325, 1385 |
| PkrI | GCNGC | 5 cut(s) | 64, 67, 966, 969, 1730 |
| PleI | GAGTC | 6 cut(s) | 162, 307, 569, 1156, 1359, 1689 |
| PpsI | GAGTC | 6 cut(s) | 162, 307, 569, 1156, 1359, 1689 |
| PscI | ACATGT | 2 cut(s) | 498, 1038 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1350 |
| Psp124BI | GAGCTC | 2 cut(s) | 409, 657 |
| Psp6I | CCWGG | 2 cut(s) | 1390, 1466 |
| PspGI | CCWGG | 2 cut(s) | 1390, 1466 |
| PspN4I | GGNNCC | 6 cut(s) | 145, 811, 1003, 1724, 1788, 1945 |
| PspPI | GGNCC | 2 cut(s) | 1001, 1560 |
| PstI | CTGCAG | 1 cut(s) | 969 |
| PstNI | CAGNNNCTG | 2 cut(s) | 775, 973 |
| PsuI | RGATCY | 6 cut(s) | 852, 1631, 1752, 1786, 1930, 1943 |
| RsaI | GTAC | 3 cut(s) | 458, 1526, 1898 |
| RsaNI | GTAC | 3 cut(s) | 457, 1525, 1897 |
| SacI | GAGCTC | 2 cut(s) | 409, 657 |
| SaqAI | TTAA | 4 cut(s) | 228, 1293, 1542, 1653 |
| SatI | GCNGC | 5 cut(s) | 63, 66, 965, 968, 1729 |
| Sau96I | GGNCC | 2 cut(s) | 1001, 1560 |
| SchI | GAGTC | 6 cut(s) | 162, 308, 569, 1157, 1360, 1690 |
| ScrFI | CCNGG | 3 cut(s) | 32, 1392, 1468 |
| SduI | GDGCHC | 6 cut(s) | 293, 409, 498, 657, 707, 812 |
| SfaNI | GCATC | 5 cut(s) | 956, 1066, 1199, 1309, 1829 |
| SfcI | CTRYAG | 1 cut(s) | 965 |
| SfuI | TTCGAA | 2 cut(s) | 1746, 1868 |
| SinI | GGWCC | 1 cut(s) | 1560 |
| SmlI | CTYRAG | 2 cut(s) | 1261, 1712 |
| SmoI | CTYRAG | 2 cut(s) | 1261, 1712 |
| SsiI | CCGC | 5 cut(s) | 65, 530, 1027, 1726, 1904 |
| SspMI | CTAG | 3 cut(s) | 435, 872, 1635 |
| SstI | GAGCTC | 2 cut(s) | 409, 657 |
| StyD4I | CCNGG | 3 cut(s) | 30, 1390, 1466 |
| TaaI | ACNGT | 4 cut(s) | 1313, 1524, 1852, 1901 |
| TatI | WGTACW | 2 cut(s) | 456, 1896 |
| TauI | GCSGC | 1 cut(s) | 68 |
| TfiI | GAWTC | 6 cut(s) | 235, 284, 563, 1267, 1325, 1385 |
| Tru1I | TTAA | 4 cut(s) | 228, 1293, 1542, 1653 |
| Tru9I | TTAA | 4 cut(s) | 228, 1293, 1542, 1653 |
| TscAI | CASTG | 5 cut(s) | 178, 214, 1318, 1387, 1906 |
| TseFI | GTSAC | 1 cut(s) | 1880 |
| TseI | GCWGC | 4 cut(s) | 62, 964, 967, 1728 |
| Tsp45I | GTSAC | 1 cut(s) | 1880 |
| TspGWI | ACGGA | 1 cut(s) | 57 |
| TspRI | CASTG | 5 cut(s) | 178, 214, 1318, 1387, 1906 |
| VneI | GTGCAC | 1 cut(s) | 703 |
| VpaK11BI | GGWCC | 1 cut(s) | 1560 |
| XapI | RAATTY | 8 cut(s) | 670, 817, 976, 1172, 1398, 1693, 1812, 1963 |
| XceI | RCATGY | 3 cut(s) | 463, 502, 1042 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1864 |
| XspI | CTAG | 3 cut(s) | 435, 872, 1635 |