pycom17g05930

exocyst complex component

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Reverse (-)
4183202 .. 4185181
1980 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1980 bp
ATGTTGAGGGGGGATTGTAAATCTATGAACCCGGAAATGGACGGAGAATGCGATTTGATTGCTGCGGCGAAGAACATAGTGAGGGCATTGGGGTCGAAGAAGAACCTTACAGATGGTGAGAGGGAGATTTTGGCTAATCTTGGCACCCAATTGTCCAGCATGATGGGACTCAGTGAGAGAAATGATGGGAATGAGGATGAGAAGATCAGTGAGGTCGAAGATCGCCTTAATTCGATTCAGGAGAGGATCATGAGTTGGGAGGCTGATCAGTCTATGATATGGGATTCGAGCCCGAATGAGTCTCTGGAGTATATGAAGGCTGTGGAGGAGGCTCGGAGATTGATCGAAAGATTGGAAAGATCGTGTTTGGATAAACATGATGAAGAATGTGAGGTGTTACATAGAGCTCACGATGTTCTTCAAACGGCAATGGCTAGGCTGGAGGAAGAGTTCAAGTACATGCTTGTTCAGAACAGGCAACCCTTTGAACCCGAGCACATGTCTTTTCGTTCGAGTGAGGATGATATTGCGGATGGAAGCTCGATAATCTCTTTTGGGGATGATTCGATGGAGGACTCACTTCAAAGGGATAGTGTCAGCAGAGCGTCGGAGGAAGTCATCATTGATTTGGTTCATCCGGATATAGTTCCTGAGCTCAGAGGCATTGCAAATTTGATGTTCAATTGCAATTATGATCAGGAGTGCACGCAAGCTTATACCATCATCCGAAAGGAGGCATTGGATGAGTGCCTCTCCATTCTCGAAATCCAGAAGCTGAGCATTGAGGATGTGCTGAAGATGGAGTGGGGCTCCCTGAATTCCAAAATCAGAAGATGGGTCTGGGGTATGAAGATCTTTGTGCGAGTTTATCTAGCCAGCGAGAGATCGCTCAGCGATCAGATTTTTGGGGAGCTTGGAGCGATTTATTTGGATTGTTTTGTTGAGGCATCAAAGACTTCAATGCTGCAGCTTCTGAATTTTGGTGAAGCCATGTCTATTGGCCCCCACCAACCGGAAAAGTTGTTCCGCATTCTTGACATGTATGAGGTGCTTGCAGATGTTCTTCCCGACATAGATGCTTTATACGCAGACGAGGCTGGTTCTTCTGTAAGAATTGAGTGTCATGAGGTTCTGATGAAATTGGGTGAGTCTGTGAAGACAACATTTAGTAAATTCGAGAGCGCCATTGCATCAAACCCCTCGACTAACCCTGTTGCTGGAGGAGGAATACATCCTCTCACCAAATATGTGATGAATTACTTGAGGATTCTCACAGACTATGGAGAGACCCTTAATTATCTCTTCGAGGACAGTGCTGATGCTGATTCCATTTCGCTGTCGCCTGACACGAGTCCTACCTCAGACGAGGAGAACAAACCCACTGATTCTCCAGGCAGAATTTTCCCAATGGTTCGCCACTTCCGATCACTTACTTCAACTCTGGAAGGCAACCTTGACGAAAAGTCCAGGTTATATAAGGATCGATCTTCCTTGCAACACATATTTTTGATGAACAATCTACGGTACATGGCTCAGAAGGTTAAGGGGGATGAACTGAGGTCCATATTCGGAGACGGCTGGCTTAGGAAGTGCAACGGGAAAGTTCAACAGCAAGCATTGAACTACCAGAGATCTAGTTGGAGTTCCATCCTTAATTTGCTCAAAGAGGAGGGCATTCAGAGTCCCGTTTCAAATTCTATCTCAAAAACCCTCAAGGAAAGGCTCCGCAGCTTTTATCTTGCGTTCGAAGAGATCTACAAGAGCCAAACAACATGGTTCATTCCGGATCCTCAGCTTCGAGAAGATGTGCAAATTTCAGCATCCCTGAATGTAATCCAAGCTTATAGGACAGTCGTGGGAAGACATTCGAACGACATAAGTGACAAGCTCATCAAGTACAGTGCGGATGATATGCAGAATTACCTCTTGGATCTCTTCGAGGGATCCCCGAAATCATTACAAAATTCCAGCAGGAGGTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

660

Amino Acids

75.1

Weight (kDa)

4.81

Isoelectric Point (pI)

58.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exo70_N PF20669 76 - 157 1.9e-14 Exocyst complex component Exo70 N-terminal
Exo70_C PF03081 278 - 644 6.1e-113 Exo70 exocyst complex subunit C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 143
AccIII TCCGGA 2 cut(s) 637, 1783
AciI CCGC 5 cut(s) 65, 530, 1027, 1726, 1904
AclWI GGATC 7 cut(s) 254, 1488, 1781, 1794, 1938, 1938, 1951
AcsI RAATTY 8 cut(s) 670, 817, 976, 1172, 1398, 1693, 1812, 1963
AcuI CTGAAG 1 cut(s) 815
AfaI GTAC 3 cut(s) 458, 1526, 1898
AfiI CCNNNNNNNGG 5 cut(s) 37, 733, 1012, 1217, 1974
AflIII ACRYGT 2 cut(s) 498, 1038
AhdI GACNNNNNGTC 1 cut(s) 1462
AjnI CCWGG 2 cut(s) 1390, 1466
AjuI GAANNNNNNNTTGG 2 cut(s) 1910, 1942
AloI GAACNNNNNNTCC 4 cut(s) 434, 466, 1007, 1039
Alw21I GWGCWC 4 cut(s) 409, 498, 657, 707
Alw26I GTCTC 3 cut(s) 306, 1280, 1566
Alw44I GTGCAC 1 cut(s) 703
AlwI GGATC 7 cut(s) 254, 1488, 1781, 1794, 1938, 1938, 1951
AlwNI CAGNNNCTG 2 cut(s) 775, 973
Ama87I CYCGRG 1 cut(s) 491
Aor13HI TCCGGA 2 cut(s) 637, 1783
AoxI GGCC 1 cut(s) 1000
ApaLI GTGCAC 1 cut(s) 703
ApeKI GCWGC 4 cut(s) 62, 964, 967, 1728
ApoI RAATTY 8 cut(s) 670, 817, 976, 1172, 1398, 1693, 1812, 1963
Asp700I GAANNNNTTC 1 cut(s) 1864
AspLEI GCGC 1 cut(s) 1184
AspS9I GGNCC 2 cut(s) 1001, 1560
AsuC2I CCSGG 1 cut(s) 32
AsuHPI GGTGA 4 cut(s) 128, 995, 1157, 1231
AsuII TTCGAA 2 cut(s) 1746, 1868
AvaI CYCGRG 1 cut(s) 491
AvaII GGWCC 1 cut(s) 1560
BaeGI GKGCMC 1 cut(s) 707
BamHI GGATCC 2 cut(s) 1786, 1943
BanI GGYRCC 1 cut(s) 143
BanII GRGCYC 4 cut(s) 293, 409, 657, 812
BauI CACGAG 1 cut(s) 1348
BbsI GAAGAC 2 cut(s) 1163, 1867
Bbv12I GWGCWC 4 cut(s) 409, 498, 657, 707
BbvCI CCTCAGC 1 cut(s) 1791
BbvI GCAGC 4 cut(s) 49, 951, 979, 1740
BccI CCATC 9 cut(s) 107, 157, 179, 527, 562, 728, 793, 828, 1655
BceAI ACGGC 2 cut(s) 441, 1591
BcgI CGANNNNNNTGC 8 cut(s) 41, 75, 75, 109, 1058, 1092, 1295, 1329
BciT130I CCWGG 2 cut(s) 1392, 1468
BclI TGATCA 2 cut(s) 265, 694
BcnI CCSGG 1 cut(s) 32
BcoDI GTCTC 3 cut(s) 306, 1280, 1566
BfaI CTAG 3 cut(s) 435, 872, 1635
BfmI CTRYAG 1 cut(s) 965
BfoI RGCGCY 1 cut(s) 1185
BglII AGATCT 3 cut(s) 852, 1631, 1752
BisI GCNGC 5 cut(s) 63, 66, 965, 968, 1729
BlpI GCTNAGC 2 cut(s) 776, 890
BlsI GCNGC 5 cut(s) 64, 67, 966, 969, 1730
Bme1390I CCNGG 3 cut(s) 32, 1392, 1468
Bme18I GGWCC 1 cut(s) 1560
BmeRI GACNNNNNGTC 1 cut(s) 1462
BmeT110I CYCGRG 1 cut(s) 491
BmgT120I GGNCC 2 cut(s) 1001, 1560
BmiI GGNNCC 6 cut(s) 145, 811, 1003, 1724, 1788, 1945
BmrFI CCNGG 3 cut(s) 32, 1392, 1468
BmsI GCATC 5 cut(s) 956, 1066, 1199, 1309, 1829
BoxI GACNNNNGTC 1 cut(s) 1350
BpiI GAAGAC 2 cut(s) 1163, 1867
BplI GAGNNNNNCTC 4 cut(s) 737, 769, 794, 826
BpmI CTGGAG 4 cut(s) 326, 461, 1239, 1374
Bpu10I CCTNAGC 3 cut(s) 651, 1583, 1791
Bpu1102I GCTNAGC 2 cut(s) 776, 890
Bpu14I TTCGAA 2 cut(s) 1746, 1868
BpuEI CTTGAG 2 cut(s) 1282, 1697
BpuMI CCSGG 1 cut(s) 32
Bsa29I ATCGAT 1 cut(s) 1483
BsaI GGTCTC 1 cut(s) 1280
BsaWI WCCGGW 3 cut(s) 637, 1012, 1783
BsaXI ACNNNNNCTCC 4 cut(s) 434, 464, 1372, 1402
Bsc4I CCNNNNNNNGG 5 cut(s) 37, 733, 1012, 1217, 1974
Bse3DI GCAATG 3 cut(s) 435, 663, 1185
BseAI TCCGGA 2 cut(s) 637, 1783
BseBI CCWGG 2 cut(s) 1392, 1468
BseCI ATCGAT 1 cut(s) 1483
BseLI CCNNNNNNNGG 5 cut(s) 37, 733, 1012, 1217, 1974
BseMI GCAATG 3 cut(s) 435, 663, 1185
BseMII CTCAG 9 cut(s) 184, 642, 670, 767, 904, 1374, 1547, 1547, 1805
BseRI GAGGAG 4 cut(s) 341, 1236, 1382, 1682
BseSI GKGCMC 1 cut(s) 707
BseXI GCAGC 4 cut(s) 49, 951, 979, 1740
BshFI GGCC 1 cut(s) 1002
BshNI GGYRCC 1 cut(s) 143
BshVI ATCGAT 1 cut(s) 1483
BsiHKAI GWGCWC 4 cut(s) 409, 498, 657, 707
BsiHKCI CYCGRG 1 cut(s) 491
BsiSI CCGG 4 cut(s) 32, 638, 1013, 1784
BslFI GGGAC 2 cut(s) 180, 1668
BslI CCNNNNNNNGG 5 cut(s) 37, 733, 1012, 1217, 1974
BsmAI GTCTC 3 cut(s) 306, 1280, 1566
BsmBI CGTCTC 1 cut(s) 1566
BsmFI GGGAC 2 cut(s) 180, 1668
BsmI GAATGC 3 cut(s) 53, 1029, 1674
BsnI GGCC 1 cut(s) 1002
Bso31I GGTCTC 1 cut(s) 1280
BsoBI CYCGRG 1 cut(s) 491
Bsp119I TTCGAA 2 cut(s) 1746, 1868
Bsp1286I GDGCHC 6 cut(s) 293, 409, 498, 657, 707, 812
Bsp13I TCCGGA 2 cut(s) 637, 1783
Bsp1720I GCTNAGC 2 cut(s) 776, 890
BspACI CCGC 5 cut(s) 65, 530, 1027, 1726, 1904
BspANI GGCC 1 cut(s) 1002
BspCNI CTCAG 9 cut(s) 183, 643, 669, 768, 903, 1373, 1546, 1548, 1804
BspDI ATCGAT 1 cut(s) 1483
BspEI TCCGGA 2 cut(s) 637, 1783
BspHI TCATGA 2 cut(s) 249, 1123
BspLI GGNNCC 6 cut(s) 145, 811, 1003, 1724, 1788, 1945
BspMAI CTGCAG 1 cut(s) 969
BspPI GGATC 7 cut(s) 254, 1488, 1781, 1794, 1938, 1938, 1951
BspT104I TTCGAA 2 cut(s) 1746, 1868
BspT107I GGYRCC 1 cut(s) 143
BspTNI GGTCTC 1 cut(s) 1280
BsrDI GCAATG 3 cut(s) 435, 663, 1185
BssSI CACGAG 1 cut(s) 1348
Bst2BI CACGAG 1 cut(s) 1348
Bst2UI CCWGG 2 cut(s) 1392, 1468
Bst4CI ACNGT 4 cut(s) 1313, 1524, 1852, 1901
Bst6I CTCTTC 4 cut(s) 441, 1307, 1743, 1940
BstBI TTCGAA 2 cut(s) 1746, 1868
BstC8I GCNNGC 6 cut(s) 707, 711, 877, 1053, 1580, 1614
BstH2I RGCGCY 1 cut(s) 1185
BstHHI GCGC 1 cut(s) 1184
BstMAI GTCTC 3 cut(s) 306, 1280, 1566
BstMWI GCNNNNNNNGC 2 cut(s) 1085, 1094
BstNI CCWGG 2 cut(s) 1392, 1468
BstNSI RCATGY 3 cut(s) 463, 502, 1042
BstPAI GACNNNNGTC 1 cut(s) 1350
BstSCI CCNGG 3 cut(s) 30, 1390, 1466
BstSFI CTRYAG 1 cut(s) 965
BstSLI GKGCMC 1 cut(s) 707
BstV1I GCAGC 4 cut(s) 49, 951, 979, 1740
BstV2I GAAGAC 2 cut(s) 1163, 1867
BstX2I RGATCY 6 cut(s) 852, 1631, 1752, 1786, 1930, 1943
BstXI CCANNNNNNTGG 1 cut(s) 163
BstYI RGATCY 6 cut(s) 852, 1631, 1752, 1786, 1930, 1943
Bsu15I ATCGAT 1 cut(s) 1483
BsuRI GGCC 1 cut(s) 1002
BsuTUI ATCGAT 1 cut(s) 1483
BtsIMutI CAGTG 5 cut(s) 178, 214, 1318, 1380, 1906
Cac8I GCNNGC 6 cut(s) 707, 711, 877, 1053, 1580, 1614
CaiI CAGNNNCTG 2 cut(s) 775, 973
CciI TCATGA 2 cut(s) 249, 1123
CfoI GCGC 1 cut(s) 1184
Cfr13I GGNCC 2 cut(s) 1001, 1560
ClaI ATCGAT 1 cut(s) 1483
CseI GACGC 1 cut(s) 594
Csp6I GTAC 3 cut(s) 457, 1525, 1897
CviQI GTAC 3 cut(s) 457, 1525, 1897
DriI GACNNNNNGTC 1 cut(s) 1462
Eam1104I CTCTTC 4 cut(s) 441, 1307, 1743, 1940
Eam1105I GACNNNNNGTC 1 cut(s) 1462
EarI CTCTTC 4 cut(s) 441, 1307, 1743, 1940
Ecl136II GAGCTC 2 cut(s) 407, 655
Eco24I GRGCYC 4 cut(s) 293, 409, 657, 812
Eco31I GGTCTC 1 cut(s) 1280
Eco47I GGWCC 1 cut(s) 1560
Eco53kI GAGCTC 2 cut(s) 407, 655
Eco57I CTGAAG 1 cut(s) 815
Eco88I CYCGRG 1 cut(s) 491
EcoICRI GAGCTC 2 cut(s) 407, 655
EcoRI GAATTC 1 cut(s) 817
EcoRII CCWGG 2 cut(s) 1390, 1466
EcoT38I GRGCYC 4 cut(s) 293, 409, 657, 812
Esp3I CGTCTC 1 cut(s) 1566
FalI AAGNNNNNCTT 4 cut(s) 210, 242, 1437, 1469
FaqI GGGAC 2 cut(s) 180, 1668
FbaI TGATCA 2 cut(s) 265, 694
Fnu4HI GCNGC 5 cut(s) 63, 66, 965, 968, 1729
FriOI GRGCYC 4 cut(s) 293, 409, 657, 812
Fsp4HI GCNGC 5 cut(s) 63, 66, 965, 968, 1729
FspBI CTAG 3 cut(s) 435, 872, 1635
GlaI GCGC 1 cut(s) 1183
GluI GCNGC 5 cut(s) 63, 66, 965, 968, 1729
GsuI CTGGAG 4 cut(s) 326, 461, 1239, 1374
HaeII RGCGCY 1 cut(s) 1185
HaeIII GGCC 1 cut(s) 1002
HapII CCGG 4 cut(s) 32, 638, 1013, 1784
HgaI GACGC 1 cut(s) 594
HhaI GCGC 1 cut(s) 1184
Hin6I GCGC 1 cut(s) 1182
HinP1I GCGC 1 cut(s) 1182
HindIII AAGCTT 2 cut(s) 711, 1839
HpaII CCGG 4 cut(s) 32, 638, 1013, 1784
HphI GGTGA 4 cut(s) 128, 995, 1157, 1231
Hpy166II GTNNAC 1 cut(s) 705
Hpy8I GTNNAC 1 cut(s) 705
Hpy99I CGWCG 1 cut(s) 610
HpyAV CCTTC 3 cut(s) 310, 1439, 1531
HpyCH4III ACNGT 4 cut(s) 1313, 1524, 1852, 1901
HpyF10VI GCNNNNNNNGC 2 cut(s) 1085, 1094
HspAI GCGC 1 cut(s) 1182
Kpn2I TCCGGA 2 cut(s) 637, 1783
Ksp22I TGATCA 2 cut(s) 265, 694
LmnI GCTCC 4 cut(s) 815, 910, 917, 1728
Lsp1109I GCAGC 4 cut(s) 49, 951, 979, 1740
LweI GCATC 5 cut(s) 956, 1066, 1199, 1309, 1829
MaeI CTAG 3 cut(s) 435, 872, 1635
MaeIII GTNAC 2 cut(s) 396, 1880
MfeI CAATTG 2 cut(s) 149, 682
MflI RGATCY 6 cut(s) 852, 1631, 1752, 1786, 1930, 1943
MhlI GDGCHC 6 cut(s) 293, 409, 498, 657, 707, 812
MlyI GAGTC 6 cut(s) 162, 308, 569, 1157, 1360, 1690
MmeI TCCRAC 2 cut(s) 588, 1619
MroI TCCGGA 2 cut(s) 637, 1783
MroXI GAANNNNTTC 1 cut(s) 1864
MseI TTAA 4 cut(s) 228, 1293, 1542, 1653
MspI CCGG 4 cut(s) 32, 638, 1013, 1784
MspR9I CCNGG 3 cut(s) 32, 1392, 1468
MunI CAATTG 2 cut(s) 149, 682
Mva1269I GAATGC 3 cut(s) 53, 1029, 1674
MvaI CCWGG 2 cut(s) 1392, 1468
MwoI GCNNNNNNNGC 2 cut(s) 1085, 1094
NciI CCSGG 1 cut(s) 32
NlaIV GGNNCC 6 cut(s) 145, 811, 1003, 1724, 1788, 1945
NmuCI GTSAC 1 cut(s) 1880
NspI RCATGY 3 cut(s) 463, 502, 1042
NspV TTCGAA 2 cut(s) 1746, 1868
PagI TCATGA 2 cut(s) 249, 1123
PciI ACATGT 2 cut(s) 498, 1038
PcsI WCGNNNNNNNCGW 3 cut(s) 48, 1346, 1420
PctI GAATGC 3 cut(s) 53, 1029, 1674
PdmI GAANNNNTTC 1 cut(s) 1864
PfeI GAWTC 6 cut(s) 235, 284, 563, 1267, 1325, 1385
PkrI GCNGC 5 cut(s) 64, 67, 966, 969, 1730
PleI GAGTC 6 cut(s) 162, 307, 569, 1156, 1359, 1689
PpsI GAGTC 6 cut(s) 162, 307, 569, 1156, 1359, 1689
PscI ACATGT 2 cut(s) 498, 1038
PshAI GACNNNNGTC 1 cut(s) 1350
Psp124BI GAGCTC 2 cut(s) 409, 657
Psp6I CCWGG 2 cut(s) 1390, 1466
PspGI CCWGG 2 cut(s) 1390, 1466
PspN4I GGNNCC 6 cut(s) 145, 811, 1003, 1724, 1788, 1945
PspPI GGNCC 2 cut(s) 1001, 1560
PstI CTGCAG 1 cut(s) 969
PstNI CAGNNNCTG 2 cut(s) 775, 973
PsuI RGATCY 6 cut(s) 852, 1631, 1752, 1786, 1930, 1943
RsaI GTAC 3 cut(s) 458, 1526, 1898
RsaNI GTAC 3 cut(s) 457, 1525, 1897
SacI GAGCTC 2 cut(s) 409, 657
SaqAI TTAA 4 cut(s) 228, 1293, 1542, 1653
SatI GCNGC 5 cut(s) 63, 66, 965, 968, 1729
Sau96I GGNCC 2 cut(s) 1001, 1560
SchI GAGTC 6 cut(s) 162, 308, 569, 1157, 1360, 1690
ScrFI CCNGG 3 cut(s) 32, 1392, 1468
SduI GDGCHC 6 cut(s) 293, 409, 498, 657, 707, 812
SfaNI GCATC 5 cut(s) 956, 1066, 1199, 1309, 1829
SfcI CTRYAG 1 cut(s) 965
SfuI TTCGAA 2 cut(s) 1746, 1868
SinI GGWCC 1 cut(s) 1560
SmlI CTYRAG 2 cut(s) 1261, 1712
SmoI CTYRAG 2 cut(s) 1261, 1712
SsiI CCGC 5 cut(s) 65, 530, 1027, 1726, 1904
SspMI CTAG 3 cut(s) 435, 872, 1635
SstI GAGCTC 2 cut(s) 409, 657
StyD4I CCNGG 3 cut(s) 30, 1390, 1466
TaaI ACNGT 4 cut(s) 1313, 1524, 1852, 1901
TatI WGTACW 2 cut(s) 456, 1896
TauI GCSGC 1 cut(s) 68
TfiI GAWTC 6 cut(s) 235, 284, 563, 1267, 1325, 1385
Tru1I TTAA 4 cut(s) 228, 1293, 1542, 1653
Tru9I TTAA 4 cut(s) 228, 1293, 1542, 1653
TscAI CASTG 5 cut(s) 178, 214, 1318, 1387, 1906
TseFI GTSAC 1 cut(s) 1880
TseI GCWGC 4 cut(s) 62, 964, 967, 1728
Tsp45I GTSAC 1 cut(s) 1880
TspGWI ACGGA 1 cut(s) 57
TspRI CASTG 5 cut(s) 178, 214, 1318, 1387, 1906
VneI GTGCAC 1 cut(s) 703
VpaK11BI GGWCC 1 cut(s) 1560
XapI RAATTY 8 cut(s) 670, 817, 976, 1172, 1398, 1693, 1812, 1963
XceI RCATGY 3 cut(s) 463, 502, 1042
XmnI GAANNNNTTC 1 cut(s) 1864
XspI CTAG 3 cut(s) 435, 872, 1635
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.