Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0009264

Physical Location & Seq

Genomic Coordinates Reverse (-)

8074307 .. 8078797

Gene Structure 4491 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1815 bp

ATGCATACTCGGGGTTACCAAAATACCCCTTTCATCTCCAGAAGCTTCCCAAACCCCTCTCCAACTCTATCAGAAACCCCTACTAAAACCCTAACTCCTCTATCCAATCTCCAGCCCTCTCTCACTCACTCACAGTCATCACTCTTTCTCTCTCTCTCTCTCGGCCTTCATCTCTCCATCTCAACCAATATGCACAGGCTCCCACGACGCTCCGTCTCCGCCATCCTGCGCCACGGCAGCGCACGTTATCGGAACTCGGCGGCTCCGATCTCCTGCGCTTCTACCCACTGCGGTTCAGTGGGAGAGACTGATAGGCAAGTCAGATGGCACTCAGTGTTGGTCCCTGGGAAGTGTAACACTACCAATTCCGCAACTTTTAACTTGAAAAATGGCCTGTATTTCGGCAATCGGTATGAGTCCACTGCTGCAGCATCTGACGCATCGGCCGCACCACCTGCTGAGACATACGAGTATCAAGCTGAGGTCAGTCGCCTCATGGACCTCATCGTTAACAGCTTGTACAGTAACAAGGAAGTTTTTCTTCGAGAGCTTATTAGCAATGCAAGTGACGCATTGGACAAACTTCGTTTCCTCAGTGTCACACAGCCTGATCTTCTGAAGGGTGGAGGTGATCTAGATATCCATATCCAGTCTGATAAAGACAATGGGATCATCAATATCATTGATTCTGGAATTGGTATGACTCGGGAAGAGCTTATTGACTGTCTGGGAACAATTGCACAAAGTGGGACATCAAAATTCTTGAAAGCATTGAAGGATAGTAAAGATGCTGGCAGTGATAACAATCTGATTGGTCAGTTTGGTGTTGGCTTTTACTCAGCATTCCTTGTTGCAGATCGGATTGTTGTCTCCACAAAGAGCCCAAAGTCTGACAAACAATATGCATGGCAAGGAGAGGTAAATGCTAGCTCTTATACAATTCAGGAGGAGATCGATCCCGAGAAGCTTATTCCCAGAGGAACCCGCATCACCTTGTATCTCAAGCGCGATGACAAAGGTTTTGCTCATCCAGAACGCATTGAAAAACTTGTGAAAAACTATTCACAATTTGTTTCCTTTCCTATATATACTTGGAAGGAAAAAGGATTCACTAAAGAGGTTGAGATAGATGAAGATCCAGCTGAATCCAAAACAGATGAACAAGATGAGAAAACCGAGAAAAAGAAGAAAACGAAGACTGTTGTTGAGAAATACTGGGATTGGGATCTCACTAATGAGACACAACCAATATGGCTTCGCAATCCTAAGGAAGTCAATACAGAGGATTACAATGAGTTCTACAAGAAAACTTTCAATGAATACTTGGATCCACTAGCATCTTCGCACTTCACAACAGAGGGTGAAGTAGAGTTCAGGTCTATTCTATATGTCCCAGCTGTTCCTCCCATGGGGAAGGATGACATAGTCAATCCCAAGACAAAAAATATAAGGCTTTATGTGAAACGGGTGTTCATTTCAGATGACTTTGACGGAGAACTGTTCCCACGATATTTAAGCTTCATCAAAGGTGTTGTGGACTCGAATGATCTTCCACTCAATGTCTCACGTGAAATACTTCAGGAGAGTCGTATTGTACGGATTATGAGGAAGCGCTTGGTTCGTAAGGCCTTTGACATGATCCTTGGAATATCCATGAGCGAGAACAGAGAAGATTATGAAAAGTTCTGGGAAAATTTTGGCAAACACTTGAAACTGGGTTGCATTGAAGATCGATCTGAAAATCATAAGCGTATTGCTCCATTGCTTAGATTTTTCTCTTCCCAGAGTGAGGATGTGATCGATCAGCTTGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0005488 GO:0005524 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0008144 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0017076 GO:0030312 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0071944 GO:0097159 GO:0097367 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko04141 ko04151 ko04626 ko04657 ko04915 ko04918 ko05200 ko05215 ko05418 map04141 map04151 map04626 map04657 map04915 map04918 map05200 map05215 map05418

Pfam Domains

Protein Families

HATPase_c HSP90

Protein Analysis

605

Amino Acids

68.55

Weight (kDa)

6.36

Isoelectric Point (pI)

45.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HATPase_c_3	PF13589	178 - 309	5.7e-08	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HATPase_c	PF02518	178 - 336	1.4e-06	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
HSP90	PF00183	341 - 599	2.6e-99	Hsp90 protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009264)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07770 AT3G07770 AT3G07770
fragaria_vesca	FvH4_6g41100 FvH4_6g41100
malus_domestica	MD09G1122200.v1.1 MD17G1113200.v1.1
prunus_persica	Prupe.3G201400_v2.0.a1
pyrus_communis	pycom09g04650 pycom17g10480
rosa_chinensis	RchiOBHm_Chr2g0156661
rosa_laevigata	RLG00000020929
rosa_multiflora	Rmu_sc0001130.1_g000001 Rmu_sc0018228.1_g000001
rosa_roxburghii	Rroxscaffold_2G00092860
rosa_rugosa	Rorug02G0455200
rosa_samantha	Rh2AG520800 Rh2BG534000 Rh2CG505800 Rh2DG542800
rosa_wichuraiana	Rw0G013720 Rw2G042970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	463
Acc36I	ACCTGC	1 cut(s)	463
AccII	CGCG	1 cut(s)	1008
AciI	CCGC	6 cut(s)	219, 260, 291, 369, 447, 985
AclWI	GGATC	7 cut(s)	677, 950, 1130, 1233, 1322, 1335, 1633
AcoI	YGGCCR	1 cut(s)	444
AcsI	RAATTY	2 cut(s)	758, 1693
AcuI	CTGAAG	2 cut(s)	638, 1562
AcvI	CACGTG	1 cut(s)	1568
AdeI	CACNNNGTG	2 cut(s)	334, 746
AfaI	GTAC	2 cut(s)	521, 1596
AfeI	AGCGCT	1 cut(s)	1613
AfiI	CCNNNNNNNGG	2 cut(s)	1409, 1789
AgsI	TTSAA	7 cut(s)	385, 766, 775, 1043, 1315, 1711, 1727
AhdI	GACNNNNNGTC	1 cut(s)	212
AjnI	CCWGG	1 cut(s)	343
Alw26I	GTCTC	6 cut(s)	220, 299, 455, 874, 1232, 1567
AlwI	GGATC	7 cut(s)	677, 950, 1130, 1233, 1322, 1335, 1633
AlwNI	CAGNNNCTG	1 cut(s)	434
Ama87I	CYCGRG	3 cut(s)	9, 705, 959
Aor51HI	AGCGCT	1 cut(s)	1613
AoxI	GGCC	4 cut(s)	163, 391, 444, 1626
ApeKI	GCWGC	3 cut(s)	237, 425, 428
ApoI	RAATTY	2 cut(s)	758, 1693
ArsI	GACNNNNNNTTYG	2 cut(s)	1004, 1036
Asp700I	GAANNNNTTC	3 cut(s)	537, 1310, 1575
AspLEI	GCGC	5 cut(s)	231, 242, 278, 1008, 1614
AspS9I	GGNCC	2 cut(s)	340, 499
AsuHPI	GGTGA	3 cut(s)	641, 982, 1373
AsuNHI	GCTAGC	1 cut(s)	926
AvaI	CYCGRG	3 cut(s)	9, 705, 959
AvaII	GGWCC	2 cut(s)	340, 499
AxyI	CCTNAGG	1 cut(s)	1266
BamHI	GGATCC	1 cut(s)	1327
BanII	GRGCYC	1 cut(s)	884
BbrPI	CACGTG	1 cut(s)	1568
BbsI	GAAGAC	1 cut(s)	1202
BbvCI	CCTCAGC	1 cut(s)	480
BbvI	GCAGC	3 cut(s)	249, 412, 440
BccI	CCATC	3 cut(s)	185, 230, 318
BceAI	ACGGC	1 cut(s)	250
BciT130I	CCWGG	1 cut(s)	345
BcoDI	GTCTC	6 cut(s)	220, 299, 455, 874, 1232, 1567
BfaI	CTAG	3 cut(s)	635, 927, 1334
BfmI	CTRYAG	1 cut(s)	426
BfoI	RGCGCY	1 cut(s)	1615
BfuAI	ACCTGC	1 cut(s)	463
BisI	GCNGC	5 cut(s)	238, 261, 426, 429, 447
BlsI	GCNGC	5 cut(s)	239, 262, 427, 430, 448
Bme1390I	CCNGG	1 cut(s)	345
Bme18I	GGWCC	2 cut(s)	340, 499
BmeRI	GACNNNNNGTC	1 cut(s)	212
BmeT110I	CYCGRG	3 cut(s)	9, 705, 959
BmgT120I	GGNCC	2 cut(s)	340, 499
BmiI	GGNNCC	5 cut(s)	200, 264, 342, 982, 1329
BmrFI	CCNGG	1 cut(s)	345
BmrI	ACTGGG	2 cut(s)	1225, 1724
BmsI	GCATC	5 cut(s)	440, 449, 778, 996, 1346
BmtI	GCTAGC	1 cut(s)	930
BmuI	ACTGGG	2 cut(s)	1225, 1724
BpiI	GAAGAC	1 cut(s)	1202
BpmI	CTGGAG	2 cut(s)	22, 95
Bpu10I	CCTNAGC	1 cut(s)	480
BpuEI	CTTGAG	1 cut(s)	986
Bsa29I	ATCGAT	3 cut(s)	954, 1732, 1800
BsaAI	YACGTR	1 cut(s)	1568
BsaBI	GATNNNNATC	3 cut(s)	804, 1134, 1224
BsaJI	CCNNGG	5 cut(s)	232, 343, 344, 1407, 1642
BsaXI	ACNNNNNCTCC	2 cut(s)	79, 109
Bsc4I	CCNNNNNNNGG	2 cut(s)	1409, 1789
Bse1I	ACTGG	3 cut(s)	649, 1220, 1719
Bse21I	CCTNAGG	1 cut(s)	1266
Bse3DI	GCAATG	2 cut(s)	565, 1760
Bse8I	GATNNNNATC	3 cut(s)	804, 1134, 1224
BseBI	CCWGG	1 cut(s)	345
BseCI	ATCGAT	3 cut(s)	954, 1732, 1800
BseDI	CCNNGG	5 cut(s)	232, 343, 344, 1407, 1642
BseGI	GGATG	4 cut(s)	222, 1027, 1423, 1798
BseJI	GATNNNNATC	3 cut(s)	804, 1134, 1224
BseLI	CCNNNNNNNGG	2 cut(s)	1409, 1789
BseMI	GCAATG	2 cut(s)	565, 1760
BseMII	CTCAG	5 cut(s)	345, 450, 471, 607, 852
BseNI	ACTGG	3 cut(s)	649, 1220, 1719
BseRI	GAGGAG	2 cut(s)	87, 962
BseX3I	CGGCCG	1 cut(s)	444
BseXI	GCAGC	3 cut(s)	249, 412, 440
BseYI	CCCAGC	1 cut(s)	1393
Bsh1236I	CGCG	1 cut(s)	1008
Bsh1285I	CGRYCG	1 cut(s)	447
BshFI	GGCC	4 cut(s)	165, 393, 446, 1628
BshVI	ATCGAT	3 cut(s)	954, 1732, 1800
BsiEI	CGRYCG	1 cut(s)	447
BsiHKCI	CYCGRG	3 cut(s)	9, 705, 959
BslFI	GGGAC	3 cut(s)	326, 763, 1376
BslI	CCNNNNNNNGG	2 cut(s)	1409, 1789
BsmAI	GTCTC	6 cut(s)	220, 299, 455, 874, 1232, 1567
BsmBI	CGTCTC	1 cut(s)	220
BsmFI	GGGAC	3 cut(s)	326, 763, 1376
BsmI	GAATGC	1 cut(s)	842
BsnI	GGCC	4 cut(s)	165, 393, 446, 1628
BsoBI	CYCGRG	3 cut(s)	9, 705, 959
Bsp1286I	GDGCHC	1 cut(s)	884
Bsp1407I	TGTACA	1 cut(s)	519
Bsp19I	CCATGG	1 cut(s)	1407
BspACI	CCGC	6 cut(s)	219, 260, 291, 369, 447, 985
BspANI	GGCC	4 cut(s)	165, 393, 446, 1628
BspCNI	CTCAG	5 cut(s)	344, 451, 472, 606, 851
BspDI	ATCGAT	3 cut(s)	954, 1732, 1800
BspFNI	CGCG	1 cut(s)	1008
BspLI	GGNNCC	5 cut(s)	200, 264, 342, 982, 1329
BspMAI	CTGCAG	1 cut(s)	430
BspMI	ACCTGC	1 cut(s)	463
BspOI	GCTAGC	1 cut(s)	930
BspPI	GGATC	7 cut(s)	677, 950, 1130, 1233, 1322, 1335, 1633
BspQI	GCTCTTC	1 cut(s)	705
BsrDI	GCAATG	2 cut(s)	565, 1760
BsrGI	TGTACA	1 cut(s)	519
BsrI	ACTGG	3 cut(s)	649, 1220, 1719
BssECI	CCNNGG	5 cut(s)	232, 343, 344, 1407, 1642
BssT1I	CCWWGG	2 cut(s)	1407, 1642
Bst2UI	CCWGG	1 cut(s)	345
Bst4CI	ACNGT	5 cut(s)	135, 524, 725, 1201, 1500
Bst6I	CTCTTC	2 cut(s)	705, 1783
BstAPI	GCANNNNNTGC	1 cut(s)	455
BstAUI	TGTACA	1 cut(s)	519
BstBAI	YACGTR	1 cut(s)	1568
BstC8I	GCNNGC	2 cut(s)	793, 928
BstDEI	CTNAG	7 cut(s)	331, 459, 480, 593, 838, 1266, 1766
BstDSI	CCRYGG	2 cut(s)	232, 1407
BstEII	GGTNACC	1 cut(s)	14
BstF5I	GGATG	4 cut(s)	222, 1027, 1423, 1798
BstFNI	CGCG	1 cut(s)	1008
BstH2I	RGCGCY	1 cut(s)	1615
BstHHI	GCGC	5 cut(s)	231, 242, 278, 1008, 1614
BstMAI	GTCTC	6 cut(s)	220, 299, 455, 874, 1232, 1567
BstMCI	CGRYCG	1 cut(s)	447
BstMWI	GCNNNNNNNGC	5 cut(s)	237, 437, 446, 455, 569
BstNI	CCWGG	1 cut(s)	345
BstPI	GGTNACC	1 cut(s)	14
BstSCI	CCNGG	1 cut(s)	343
BstSFI	CTRYAG	1 cut(s)	426
BstUI	CGCG	1 cut(s)	1008
BstV1I	GCAGC	3 cut(s)	249, 412, 440
BstV2I	GAAGAC	1 cut(s)	1202
BstX2I	RGATCY	3 cut(s)	1135, 1225, 1327
BstYI	RGATCY	3 cut(s)	1135, 1225, 1327
BstZI	CGGCCG	1 cut(s)	444
Bsu15I	ATCGAT	3 cut(s)	954, 1732, 1800
Bsu36I	CCTNAGG	1 cut(s)	1266
BsuRI	GGCC	4 cut(s)	165, 393, 446, 1628
BsuTUI	ATCGAT	3 cut(s)	954, 1732, 1800
BtgI	CCRYGG	2 cut(s)	232, 1407
BtgZI	GCGATG	1 cut(s)	1023
BtsCI	GGATG	4 cut(s)	222, 1027, 1423, 1798
BtsI	GCAGTG	3 cut(s)	286, 420, 802
BtsIMutI	CAGTG	6 cut(s)	286, 303, 339, 420, 601, 802
BveI	ACCTGC	1 cut(s)	463
Cac8I	GCNNGC	2 cut(s)	793, 928
CaiI	CAGNNNCTG	1 cut(s)	434
CfoI	GCGC	5 cut(s)	231, 242, 278, 1008, 1614
Cfr13I	GGNCC	2 cut(s)	340, 499
ClaI	ATCGAT	3 cut(s)	954, 1732, 1800
CseI	GACGC	3 cut(s)	216, 446, 578
Csp6I	GTAC	2 cut(s)	520, 1595
CviAII	CATG	5 cut(s)	496, 906, 1408, 1636, 1654
CviQI	GTAC	2 cut(s)	520, 1595
DdeI	CTNAG	7 cut(s)	331, 459, 480, 593, 838, 1266, 1766
DraIII	CACNNNGTG	2 cut(s)	334, 746
DriI	GACNNNNNGTC	1 cut(s)	212
EaeI	YGGCCR	1 cut(s)	444
EagI	CGGCCG	1 cut(s)	444
Eam1104I	CTCTTC	2 cut(s)	705, 1783
Eam1105I	GACNNNNNGTC	1 cut(s)	212
EarI	CTCTTC	2 cut(s)	705, 1783
EciI	GGCGGA	1 cut(s)	208
EclXI	CGGCCG	1 cut(s)	444
Eco130I	CCWWGG	2 cut(s)	1407, 1642
Eco147I	AGGCCT	1 cut(s)	1628
Eco24I	GRGCYC	1 cut(s)	884
Eco32I	GATATC	1 cut(s)	640
Eco47I	GGWCC	2 cut(s)	340, 499
Eco47III	AGCGCT	1 cut(s)	1613
Eco52I	CGGCCG	1 cut(s)	444
Eco57I	CTGAAG	2 cut(s)	638, 1562
Eco72I	CACGTG	1 cut(s)	1568
Eco81I	CCTNAGG	1 cut(s)	1266
Eco88I	CYCGRG	3 cut(s)	9, 705, 959
Eco91I	GGTNACC	1 cut(s)	14
EcoO65I	GGTNACC	1 cut(s)	14
EcoRII	CCWGG	1 cut(s)	343
EcoRV	GATATC	1 cut(s)	640
EcoT14I	CCWWGG	2 cut(s)	1407, 1642
EcoT22I	ATGCAT	2 cut(s)	6, 907
EcoT38I	GRGCYC	1 cut(s)	884
ErhI	CCWWGG	2 cut(s)	1407, 1642
Esp3I	CGTCTC	1 cut(s)	220
FaeI	CATG	5 cut(s)	499, 909, 1411, 1639, 1657
FalI	AAGNNNNNCTT	2 cut(s)	525, 557
FaqI	GGGAC	3 cut(s)	326, 763, 1376
FatI	CATG	5 cut(s)	495, 905, 1407, 1635, 1653
FauI	CCCGC	1 cut(s)	992
Fnu4HI	GCNGC	5 cut(s)	238, 261, 426, 429, 447
FokI	GGATG	4 cut(s)	209, 1014, 1430, 1805
FriOI	GRGCYC	1 cut(s)	884
Fsp4HI	GCNGC	5 cut(s)	238, 261, 426, 429, 447
FspBI	CTAG	3 cut(s)	635, 927, 1334
GlaI	GCGC	5 cut(s)	230, 241, 277, 1007, 1613
GluI	GCNGC	5 cut(s)	238, 261, 426, 429, 447
GsaI	CCCAGC	1 cut(s)	1397
GsuI	CTGGAG	2 cut(s)	22, 95
HaeII	RGCGCY	1 cut(s)	1615
HaeIII	GGCC	4 cut(s)	165, 393, 446, 1628
HgaI	GACGC	3 cut(s)	216, 446, 578
HhaI	GCGC	5 cut(s)	231, 242, 278, 1008, 1614
Hin1II	CATG	5 cut(s)	499, 909, 1411, 1639, 1657
Hin6I	GCGC	5 cut(s)	229, 240, 276, 1006, 1612
HinP1I	GCGC	5 cut(s)	229, 240, 276, 1006, 1612
HincII	GTYRAC	1 cut(s)	511
HindII	GTYRAC	1 cut(s)	511
HindIII	AAGCTT	3 cut(s)	43, 965, 1516
HinfI	GANTC	7 cut(s)	416, 686, 703, 1107, 1145, 1538, 1585
HpaI	GTTAAC	1 cut(s)	511
HphI	GGTGA	3 cut(s)	641, 982, 1373
Hpy166II	GTNNAC	3 cut(s)	420, 511, 1537
Hpy8I	GTNNAC	3 cut(s)	420, 511, 1537
Hpy99I	CGWCG	1 cut(s)	210
HpyAV	CCTTC	5 cut(s)	176, 613, 769, 1090, 1408
HpyCH4III	ACNGT	5 cut(s)	135, 524, 725, 1201, 1500
HpyCH4IV	ACGT	2 cut(s)	244, 1567
HpyCH4V	TGCA	8 cut(s)	4, 193, 428, 563, 740, 854, 905, 1722
HpyF10VI	GCNNNNNNNGC	5 cut(s)	237, 437, 446, 455, 569
HpyF3I	CTNAG	7 cut(s)	331, 459, 480, 593, 838, 1266, 1766
HpySE526I	ACGT	2 cut(s)	244, 1567
Hsp92II	CATG	5 cut(s)	499, 909, 1411, 1639, 1657
HspAI	GCGC	5 cut(s)	229, 240, 276, 1006, 1612
KspAI	GTTAAC	1 cut(s)	511
LguI	GCTCTTC	1 cut(s)	705
LmnI	GCTCC	4 cut(s)	204, 215, 268, 1762
Lsp1109I	GCAGC	3 cut(s)	249, 412, 440
LweI	GCATC	5 cut(s)	440, 449, 778, 996, 1346
MaeI	CTAG	3 cut(s)	635, 927, 1334
MaeII	ACGT	2 cut(s)	244, 1567
MaeIII	GTNAC	5 cut(s)	14, 353, 524, 566, 598
MfeI	CAATTG	1 cut(s)	735
MflI	RGATCY	3 cut(s)	1135, 1225, 1327
MhlI	GDGCHC	1 cut(s)	884
MluCI	AATT	7 cut(s)	364, 693, 735, 758, 939, 1067, 1693
MlyI	GAGTC	4 cut(s)	425, 697, 1532, 1594
MmeI	TCCRAC	1 cut(s)	86
Mph1103I	ATGCAT	2 cut(s)	6, 907
MroXI	GAANNNNTTC	3 cut(s)	537, 1310, 1575
MseI	TTAA	3 cut(s)	378, 510, 1514
MspA1I	CMGCKG	2 cut(s)	1142, 1397
MspR9I	CCNGG	1 cut(s)	345
MunI	CAATTG	1 cut(s)	735
Mva1269I	GAATGC	1 cut(s)	842
MvaI	CCWGG	1 cut(s)	345
MvnI	CGCG	1 cut(s)	1008
MwoI	GCNNNNNNNGC	5 cut(s)	237, 437, 446, 455, 569
NcoI	CCATGG	1 cut(s)	1407
NheI	GCTAGC	1 cut(s)	926
NlaIII	CATG	5 cut(s)	499, 909, 1411, 1639, 1657
NlaIV	GGNNCC	5 cut(s)	200, 264, 342, 982, 1329
NmeAIII	GCCGAG	2 cut(s)	141, 236
NmuCI	GTSAC	2 cut(s)	566, 598
NsiI	ATGCAT	2 cut(s)	6, 907
PaqCI	CACCTGC	1 cut(s)	463
PasI	CCCWGGG	1 cut(s)	344
PceI	AGGCCT	1 cut(s)	1628
PciSI	GCTCTTC	1 cut(s)	705
PcsI	WCGNNNNNNNCGW	1 cut(s)	263
PctI	GAATGC	1 cut(s)	842
PdmI	GAANNNNTTC	3 cut(s)	537, 1310, 1575
PfeI	GAWTC	3 cut(s)	686, 1107, 1145
PflFI	GACNNNGTC	1 cut(s)	1424
PkrI	GCNGC	5 cut(s)	239, 262, 427, 430, 448
PleI	GAGTC	4 cut(s)	424, 697, 1532, 1593
PmaCI	CACGTG	1 cut(s)	1568
PmlI	CACGTG	1 cut(s)	1568
PpsI	GAGTC	4 cut(s)	424, 697, 1532, 1593
Ppu21I	YACGTR	1 cut(s)	1568
Psp6I	CCWGG	1 cut(s)	343
PspCI	CACGTG	1 cut(s)	1568
PspEI	GGTNACC	1 cut(s)	14
PspFI	CCCAGC	1 cut(s)	1393
PspGI	CCWGG	1 cut(s)	343
PspN4I	GGNNCC	5 cut(s)	200, 264, 342, 982, 1329
PspPI	GGNCC	2 cut(s)	340, 499
PstI	CTGCAG	1 cut(s)	430
PstNI	CAGNNNCTG	1 cut(s)	434
PsuI	RGATCY	3 cut(s)	1135, 1225, 1327
PsyI	GACNNNGTC	1 cut(s)	1424
PvuII	CAGCTG	2 cut(s)	1142, 1397
RsaI	GTAC	2 cut(s)	521, 1596
RsaNI	GTAC	2 cut(s)	520, 1595
SapI	GCTCTTC	1 cut(s)	705
SaqAI	TTAA	3 cut(s)	378, 510, 1514
SatI	GCNGC	5 cut(s)	238, 261, 426, 429, 447
Sau96I	GGNCC	2 cut(s)	340, 499
SchI	GAGTC	4 cut(s)	425, 697, 1532, 1594
ScrFI	CCNGG	1 cut(s)	345
SduI	GDGCHC	1 cut(s)	884
SfaNI	GCATC	5 cut(s)	440, 449, 778, 996, 1346
SfcI	CTRYAG	1 cut(s)	426
SinI	GGWCC	2 cut(s)	340, 499
SmlI	CTYRAG	1 cut(s)	1001
SmoI	CTYRAG	1 cut(s)	1001
Sse9I	AATT	7 cut(s)	364, 693, 735, 758, 939, 1067, 1693
SseBI	AGGCCT	1 cut(s)	1628
SsiI	CCGC	6 cut(s)	219, 260, 291, 369, 447, 985
SspMI	CTAG	3 cut(s)	635, 927, 1334
StuI	AGGCCT	1 cut(s)	1628
StyD4I	CCNGG	1 cut(s)	343
StyI	CCWWGG	2 cut(s)	1407, 1642
TaaI	ACNGT	5 cut(s)	135, 524, 725, 1201, 1500
TaiI	ACGT	2 cut(s)	247, 1570
TaqI	TCGA	5 cut(s)	544, 954, 1541, 1732, 1800
TasI	AATT	7 cut(s)	364, 693, 735, 758, 939, 1067, 1693
TatI	WGTACW	1 cut(s)	519
TauI	GCSGC	2 cut(s)	263, 449
TfiI	GAWTC	3 cut(s)	686, 1107, 1145
Tru1I	TTAA	3 cut(s)	378, 510, 1514
Tru9I	TTAA	3 cut(s)	378, 510, 1514
TscAI	CASTG	6 cut(s)	293, 303, 339, 427, 601, 802
TseFI	GTSAC	2 cut(s)	566, 598
TseI	GCWGC	3 cut(s)	237, 425, 428
Tsp45I	GTSAC	2 cut(s)	566, 598
TspDTI	ATGAA	8 cut(s)	22, 158, 1146, 1173, 1332, 1462, 1510, 1692
TspGWI	ACGGA	3 cut(s)	202, 1506, 1612
TspRI	CASTG	6 cut(s)	293, 303, 339, 427, 601, 802
Tth111I	GACNNNGTC	1 cut(s)	1424
VpaK11BI	GGWCC	2 cut(s)	340, 499
XapI	RAATTY	2 cut(s)	758, 1693
XbaI	TCTAGA	1 cut(s)	634
XmnI	GAANNNNTTC	3 cut(s)	537, 1310, 1575
XspI	CTAG	3 cut(s)	635, 927, 1334
Zsp2I	ATGCAT	2 cut(s)	6, 907

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.