pycom17g18720

Anoctamin-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0006221
Physical Location & Seq
Reverse (-)
16141349 .. 16145436
4088 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1974 bp
ATGAACGCCGTTGAGGAGGAACAGACTGCCTTCGAGATCGGGGTGGTGGTTCCGAAGCGTAATGTGAAGGAGGAAGATAGAGCTTTTGATTGTGTGGAGGTTTTGCTGGAGGAGTTTAGGAATTTGGGTTTGGTTGTTGAGAGAGTGCATGGCGTTGTCGATGAGTTCATCAAGCTGGCAGCACCTTCGGAGACGCTGGGCAGGGCTGCAGCGGAATTGCAGATTAAAAAACGAACTGCTATCGGGATGGATTTACAATTTGAATGGGAGGAGGTTGATGCTTTTGTGAGACAGCCTGATGGTTCAGTGTTCAGTTGGTGTGAGCGTTTTCGCTGCTATAAGCACTTAATCTATGGAATTATTAACAAGAGCCGGTCAACTGTAACTTTAAGATTTGATGATAAAGAGCTCCATTGGGAAGTCGGGGAGTATTTACTTCAGAAGTTGGAATCAGAAAGGATTGTCAAAGAAGTGTTTCCTTTACATGATGAAATAAAAAGGAAGAAGCTCCTTCACTCATGGGCACTACACTGGTGGGACTTCACAAACCAGCCGATAGATGAGATTTATTCATACTTTGGTACAAAGATTGCCATCTATTTTGCTTTCCTTGGAATGTATACAAGGTGGTTGCTCTTTCCAGCTGCATTTGGGCTTATCATGCACATGTTTGATTTTGGGTCATTGCAGTTACTGGTGCTCCCTATTTTCTTCATAAGCATAATATTGTGGGCTATAATGTTTTCACAGTTTTGGAAACGCAAAAATAATGCCCTTTTAGCCAGATGGCAGATTAGTTATCCAGTTAGAGCTGACTTGGGATATAGACAGGGTGTGGAGTGGAGTTCCTCACCATCTGTTGAGCTCGCAAAAAAGTGGGGGACAGACAAAACAAAAGAAAAAGAAATGTTCCAAAGAATTGAGTGGTTTGGACGACTCATGAGATTCCGAAATGATGCTATCGTTTTCTTCAGTATTATATGCCTTCAATTACCATTTGAACTGGCATATGCTCATATTTATGAGGTTATTGAGTCTGATATTATGAAGTTTGGGTTGACAACCGTTTATCTTTTTTCCATTCAGTTCTTTACACAGATTGGAGGCAAGATCTCCGTCAAGCTCATTCAATATGAAAATAATGAAAACAAAGAAAAAAGAGCTGACAGCTTGGTCTATAAGGTGTTTGGTCTTTATTTCATGCAGTCGTATATAGGAGTGTTCTATCATGCCCTTTTGCACCGCAACTTTTCTACTCTCCGCAAAGTCTTGATTCAACGCCTCCTTGTGTCTCAGGTGTTGGAAAACTTGTTGGAAAACACTTTGCCATATTTAAAGTACAGTTATAAGAAATATAGAGTTCAAAGCAAGAAAAAGCGTGAAAAAGGTTCAACGACAGGGAAGATTCGGTTTGCTTCTAGGGTAGAGAAAGAGTACCTGAAGCCTTCTTATTCCGCTAGCATTGGCATGGAACTTGAAGATGGGCTGTTTGATGACTTTCTTGAGGTGGCATTGCAGTTTGGAATGATCATGATGTTTGCTTGTGCATTCCCCCTTGCTTTTGCCTTTGCAATTTTGAACAACATCACTGAAATTAGGGCAGATGCATTGAAGCTTCTTGCCATGTTGCGAAGACCAACACCTCGCTTTTCCACAACAATTGGAGCTTGGCTGAACATATTTCAGTTTCTCGTAGTTATATCTATATGCACCAACTGCGCACTTCTAGTATGGTTATATGATGAAGAGGGCAAATGGAAGATAGAGCCTGGCCTGGCTGCAATTCTTGTTATGGAGCATGTTCTCTTGTTGATCAAATTTGGATTCTCCCGCTTTGTTCCCGAGGAACCTGCTTGGGTAAAAGCCAACCGTGTGAAAAACGCGACAACAGCTGAGAACATGTGTTCTAAACAGCTCTTGAGGAGCATTTCTGGAGAGAGGATGACGTTTGGTAATGTCAAGAAGTCGCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Anoctamin

Protein Analysis

658

Amino Acids

76.78

Weight (kDa)

8.91

Isoelectric Point (pI)

40.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Anoctamin PF04547 189 - 625 2.2e-104 Calcium-activated chloride channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1347
AasI GACNNNNNNGTC 1 cut(s) 1172
Acc16I TGCGCA 1 cut(s) 1720
Acc36I ACCTGC 1 cut(s) 1858
AccI GTMKAC 1 cut(s) 620
AccII CGCG 1 cut(s) 1883
AciI CCGC 5 cut(s) 212, 1243, 1261, 1455, 1831
AcsI RAATTY 2 cut(s) 121, 1817
AcuI CTGAAG 3 cut(s) 422, 955, 1460
AfaI GTAC 3 cut(s) 583, 1340, 1436
AflIII ACRYGT 2 cut(s) 666, 1899
AjnI CCWGG 2 cut(s) 1768, 1773
AjuI GAANNNNNNNTTGG 2 cut(s) 113, 145
Alw21I GWGCWC 3 cut(s) 411, 702, 867
Alw26I GTCTC 3 cut(s) 185, 283, 1296
AlwNI CAGNNNCTG 1 cut(s) 694
Ama87I CYCGRG 1 cut(s) 1841
AoxI GGCC 1 cut(s) 1771
ApeKI GCWGC 6 cut(s) 179, 206, 209, 333, 644, 1778
ApoI RAATTY 2 cut(s) 121, 1817
Asp700I GAANNNNTTC 1 cut(s) 474
AspLEI GCGC 1 cut(s) 1721
AsuHPI GGTGA 1 cut(s) 843
AsuNHI GCTAGC 1 cut(s) 1457
AvaI CYCGRG 1 cut(s) 1841
BaeGI GKGCMC 1 cut(s) 526
BanII GRGCYC 2 cut(s) 411, 867
BbsI GAAGAC 1 cut(s) 1639
Bbv12I GWGCWC 3 cut(s) 411, 702, 867
BbvI GCAGC 6 cut(s) 191, 193, 221, 320, 631, 1765
BccI CCATC 6 cut(s) 241, 293, 602, 780, 862, 1475
BcgI CGANNNNNNTGC 4 cut(s) 168, 202, 1832, 1866
BciT130I CCWGG 2 cut(s) 1770, 1775
BclI TGATCA 2 cut(s) 1527, 1812
BcoDI GTCTC 3 cut(s) 185, 283, 1296
BfaI CTAG 3 cut(s) 1419, 1458, 1727
BfmI CTRYAG 1 cut(s) 207
BfuAI ACCTGC 1 cut(s) 1858
BglII AGATCT 1 cut(s) 1110
BisI GCNGC 6 cut(s) 180, 207, 210, 334, 645, 1779
BlsI GCNGC 6 cut(s) 181, 208, 211, 335, 646, 1780
Bme1390I CCNGG 2 cut(s) 1770, 1775
BmeT110I CYCGRG 1 cut(s) 1841
BmiI GGNNCC 2 cut(s) 51, 1848
BmrFI CCNGG 2 cut(s) 1770, 1775
BmsI GCATC 3 cut(s) 268, 946, 1594
BmtI GCTAGC 1 cut(s) 1461
BpiI GAAGAC 1 cut(s) 1639
BpmI CTGGAG 2 cut(s) 128, 1953
BpuEI CTTGAG 2 cut(s) 1523, 1939
BsaBI GATNNNNATC 1 cut(s) 593
BsaJI CCNNGG 2 cut(s) 610, 1842
BsaXI ACNNNNNCTCC 2 cut(s) 684, 714
Bse118I RCCGGY 1 cut(s) 372
Bse1I ACTGG 4 cut(s) 536, 699, 803, 1008
Bse3DI GCAATG 2 cut(s) 683, 1511
Bse8I GATNNNNATC 1 cut(s) 593
BseBI CCWGG 2 cut(s) 1770, 1775
BseDI CCNNGG 2 cut(s) 610, 1842
BseGI GGATG 2 cut(s) 252, 1947
BseJI GATNNNNATC 1 cut(s) 593
BseMI GCAATG 2 cut(s) 683, 1511
BseMII CTCAG 2 cut(s) 1307, 1884
BseNI ACTGG 4 cut(s) 536, 699, 803, 1008
BseRI GAGGAG 4 cut(s) 29, 125, 284, 1936
BseSI GKGCMC 1 cut(s) 526
BseXI GCAGC 6 cut(s) 191, 193, 221, 320, 631, 1765
BseYI CCCAGC 1 cut(s) 196
Bsh1236I CGCG 1 cut(s) 1883
BshFI GGCC 1 cut(s) 1773
BsiHKAI GWGCWC 3 cut(s) 411, 702, 867
BsiHKCI CYCGRG 1 cut(s) 1841
BsiSI CCGG 1 cut(s) 373
BslFI GGGAC 2 cut(s) 551, 895
BsmAI GTCTC 3 cut(s) 185, 283, 1296
BsmBI CGTCTC 1 cut(s) 185
BsmFI GGGAC 2 cut(s) 551, 895
BsmI GAATGC 1 cut(s) 1547
BsnI GGCC 1 cut(s) 1773
BsoBI CYCGRG 1 cut(s) 1841
Bsp1286I GDGCHC 4 cut(s) 411, 526, 702, 867
Bsp143I GATC 4 cut(s) 36, 1110, 1527, 1812
BspACI CCGC 5 cut(s) 212, 1243, 1261, 1455, 1831
BspANI GGCC 1 cut(s) 1773
BspCNI CTCAG 2 cut(s) 1306, 1885
BspFNI CGCG 1 cut(s) 1883
BspHI TCATGA 2 cut(s) 939, 1530
BspLI GGNNCC 2 cut(s) 51, 1848
BspMAI CTGCAG 1 cut(s) 211
BspMI ACCTGC 1 cut(s) 1858
BspOI GCTAGC 1 cut(s) 1461
BsrDI GCAATG 2 cut(s) 683, 1511
BsrFI RCCGGY 1 cut(s) 372
BsrI ACTGG 4 cut(s) 536, 699, 803, 1008
BssAI RCCGGY 1 cut(s) 372
BssECI CCNNGG 2 cut(s) 610, 1842
BssMI GATC 4 cut(s) 36, 1110, 1527, 1812
BssNAI GTATAC 1 cut(s) 621
BssT1I CCWWGG 1 cut(s) 610
Bst1107I GTATAC 1 cut(s) 621
Bst2UI CCWGG 2 cut(s) 1770, 1775
Bst4CI ACNGT 5 cut(s) 382, 750, 1066, 1343, 1871
Bst6I CTCTTC 1 cut(s) 1740
BstAPI GCANNNNNTGC 1 cut(s) 1716
BstC8I GCNNGC 3 cut(s) 177, 867, 1459
BstDEI CTNAG 2 cut(s) 1293, 1893
BstF5I GGATG 2 cut(s) 252, 1947
BstFNI CGCG 1 cut(s) 1883
BstHHI GCGC 1 cut(s) 1721
BstKTI GATC 4 cut(s) 39, 1113, 1530, 1815
BstMAI GTCTC 3 cut(s) 185, 283, 1296
BstMBI GATC 4 cut(s) 36, 1110, 1527, 1812
BstMWI GCNNNNNNNGC 4 cut(s) 661, 779, 1716, 1889
BstNI CCWGG 2 cut(s) 1770, 1775
BstNSI RCATGY 3 cut(s) 670, 1802, 1903
BstSCI CCNGG 2 cut(s) 1768, 1773
BstSFI CTRYAG 1 cut(s) 207
BstSLI GKGCMC 1 cut(s) 526
BstUI CGCG 1 cut(s) 1883
BstV1I GCAGC 6 cut(s) 191, 193, 221, 320, 631, 1765
BstV2I GAAGAC 1 cut(s) 1639
BstX2I RGATCY 1 cut(s) 1110
BstYI RGATCY 1 cut(s) 1110
BstZ17I GTATAC 1 cut(s) 621
BsuRI GGCC 1 cut(s) 1773
BtsCI GGATG 2 cut(s) 252, 1947
BtsIMutI CAGTG 3 cut(s) 312, 529, 1587
BveI ACCTGC 1 cut(s) 1858
Cac8I GCNNGC 3 cut(s) 177, 867, 1459
CaiI CAGNNNCTG 1 cut(s) 694
CciI TCATGA 2 cut(s) 939, 1530
CfoI GCGC 1 cut(s) 1721
Cfr10I RCCGGY 1 cut(s) 372
CseI GACGC 1 cut(s) 202
Csp6I GTAC 3 cut(s) 582, 1339, 1435
CspCI CAANNNNNGTGG 2 cut(s) 1642, 1677
CviQI GTAC 3 cut(s) 582, 1339, 1435
DdeI CTNAG 2 cut(s) 1293, 1893
DpnI GATC 4 cut(s) 38, 1112, 1529, 1814
DpnII GATC 4 cut(s) 36, 1110, 1527, 1812
DraI TTTAAA 1 cut(s) 1335
DrdI GACNNNNNNGTC 1 cut(s) 1172
DseDI GACNNNNNNGTC 1 cut(s) 1172
Eam1104I CTCTTC 1 cut(s) 1740
EarI CTCTTC 1 cut(s) 1740
Ecl136II GAGCTC 2 cut(s) 409, 865
Eco130I CCWWGG 1 cut(s) 610
Eco24I GRGCYC 2 cut(s) 411, 867
Eco53kI GAGCTC 2 cut(s) 409, 865
Eco57I CTGAAG 3 cut(s) 422, 955, 1460
Eco88I CYCGRG 1 cut(s) 1841
EcoICRI GAGCTC 2 cut(s) 409, 865
EcoRII CCWGG 2 cut(s) 1768, 1773
EcoT14I CCWWGG 1 cut(s) 610
EcoT22I ATGCAT 1 cut(s) 1609
EcoT38I GRGCYC 2 cut(s) 411, 867
ErhI CCWWGG 1 cut(s) 610
Esp3I CGTCTC 1 cut(s) 185
FaqI GGGAC 2 cut(s) 551, 895
FauI CCCGC 1 cut(s) 1838
FauNDI CATATG 1 cut(s) 1009
FbaI TGATCA 2 cut(s) 1527, 1812
FblI GTMKAC 1 cut(s) 620
Fnu4HI GCNGC 6 cut(s) 180, 207, 210, 334, 645, 1779
FokI GGATG 2 cut(s) 259, 1954
FriOI GRGCYC 2 cut(s) 411, 867
Fsp4HI GCNGC 6 cut(s) 180, 207, 210, 334, 645, 1779
FspBI CTAG 3 cut(s) 1419, 1458, 1727
FspI TGCGCA 1 cut(s) 1720
GlaI GCGC 1 cut(s) 1720
GluI GCNGC 6 cut(s) 180, 207, 210, 334, 645, 1779
GsaI CCCAGC 1 cut(s) 200
GsuI CTGGAG 2 cut(s) 128, 1953
HaeIII GGCC 1 cut(s) 1773
HapII CCGG 1 cut(s) 373
HgaI GACGC 1 cut(s) 202
HhaI GCGC 1 cut(s) 1721
Hin6I GCGC 1 cut(s) 1719
HinP1I GCGC 1 cut(s) 1719
HincII GTYRAC 2 cut(s) 378, 1059
HindII GTYRAC 2 cut(s) 378, 1059
HindIII AAGCTT 1 cut(s) 1613
HinfI GANTC 7 cut(s) 449, 936, 945, 1034, 1273, 1405, 1824
HpaII CCGG 1 cut(s) 373
HphI GGTGA 1 cut(s) 843
Hpy166II GTNNAC 3 cut(s) 378, 621, 1059
Hpy188I TCNGA 6 cut(s) 54, 190, 441, 454, 950, 1039
Hpy8I GTNNAC 3 cut(s) 378, 621, 1059
HpyAV CCTTC 6 cut(s) 40, 61, 195, 521, 995, 1455
HpyCH4III ACNGT 5 cut(s) 382, 750, 1066, 1343, 1871
HpyCH4IV ACGT 1 cut(s) 1946
HpyF10VI GCNNNNNNNGC 4 cut(s) 661, 779, 1716, 1889
HpyF3I CTNAG 2 cut(s) 1293, 1893
HpySE526I ACGT 1 cut(s) 1946
HspAI GCGC 1 cut(s) 1719
Ksp22I TGATCA 2 cut(s) 1527, 1812
Kzo9I GATC 4 cut(s) 36, 1110, 1527, 1812
LmnI GCTCC 6 cut(s) 414, 513, 705, 1664, 1795, 1923
Lsp1109I GCAGC 6 cut(s) 191, 193, 221, 320, 631, 1765
LweI GCATC 3 cut(s) 268, 946, 1594
MaeI CTAG 3 cut(s) 1419, 1458, 1727
MaeII ACGT 1 cut(s) 1946
MaeIII GTNAC 2 cut(s) 382, 690
MalI GATC 4 cut(s) 38, 1112, 1529, 1814
MboI GATC 4 cut(s) 36, 1110, 1527, 1812
MboII GAAGA 9 cut(s) 86, 514, 703, 961, 1414, 1490, 1644, 1757, 1771
MfeI CAATTG 1 cut(s) 1659
MflI RGATCY 1 cut(s) 1110
MhlI GDGCHC 4 cut(s) 411, 526, 702, 867
MlyI GAGTC 2 cut(s) 930, 1043
MmeI TCCRAC 3 cut(s) 426, 1281, 1293
Mph1103I ATGCAT 1 cut(s) 1609
MroXI GAANNNNTTC 1 cut(s) 474
MseI TTAA 5 cut(s) 225, 347, 363, 389, 1334
MslI CAYNNNNRTG 3 cut(s) 665, 1020, 1466
MspA1I CMGCKG 3 cut(s) 212, 644, 1892
MspI CCGG 1 cut(s) 373
MspR9I CCNGG 2 cut(s) 1770, 1775
MunI CAATTG 1 cut(s) 1659
Mva1269I GAATGC 1 cut(s) 1547
MvaI CCWGG 2 cut(s) 1770, 1775
MvnI CGCG 1 cut(s) 1883
MwoI GCNNNNNNNGC 4 cut(s) 661, 779, 1716, 1889
NdeI CATATG 1 cut(s) 1009
NdeII GATC 4 cut(s) 36, 1110, 1527, 1812
NheI GCTAGC 1 cut(s) 1457
NlaIV GGNNCC 2 cut(s) 51, 1848
NsbI TGCGCA 1 cut(s) 1720
NsiI ATGCAT 1 cut(s) 1609
NspI RCATGY 3 cut(s) 670, 1802, 1903
PagI TCATGA 2 cut(s) 939, 1530
PciI ACATGT 2 cut(s) 666, 1899
PctI GAATGC 1 cut(s) 1547
PdmI GAANNNNTTC 1 cut(s) 474
PfeI GAWTC 5 cut(s) 449, 945, 1273, 1405, 1824
PkrI GCNGC 6 cut(s) 181, 208, 211, 335, 646, 1780
PleI GAGTC 2 cut(s) 930, 1042
PpsI GAGTC 2 cut(s) 930, 1042
PscI ACATGT 2 cut(s) 666, 1899
PsiI TTATAA 1 cut(s) 1347
Psp124BI GAGCTC 2 cut(s) 411, 867
Psp6I CCWGG 2 cut(s) 1768, 1773
PspFI CCCAGC 1 cut(s) 196
PspGI CCWGG 2 cut(s) 1768, 1773
PspN4I GGNNCC 2 cut(s) 51, 1848
PstI CTGCAG 1 cut(s) 211
PstNI CAGNNNCTG 1 cut(s) 694
PsuI RGATCY 1 cut(s) 1110
PvuII CAGCTG 2 cut(s) 644, 1892
RsaI GTAC 3 cut(s) 583, 1340, 1436
RsaNI GTAC 3 cut(s) 582, 1339, 1435
RseI CAYNNNNRTG 3 cut(s) 665, 1020, 1466
SacI GAGCTC 2 cut(s) 411, 867
SaqAI TTAA 5 cut(s) 225, 347, 363, 389, 1334
SatI GCNGC 6 cut(s) 180, 207, 210, 334, 645, 1779
Sau3AI GATC 4 cut(s) 36, 1110, 1527, 1812
SchI GAGTC 2 cut(s) 930, 1043
ScrFI CCNGG 2 cut(s) 1770, 1775
SduI GDGCHC 4 cut(s) 411, 526, 702, 867
SfaNI GCATC 3 cut(s) 268, 946, 1594
SfcI CTRYAG 1 cut(s) 207
SmiMI CAYNNNNRTG 3 cut(s) 665, 1020, 1466
SmlI CTYRAG 2 cut(s) 1502, 1918
SmoI CTYRAG 2 cut(s) 1502, 1918
SsiI CCGC 5 cut(s) 212, 1243, 1261, 1455, 1831
SspI AATATT 1 cut(s) 726
SspMI CTAG 3 cut(s) 1419, 1458, 1727
SstI GAGCTC 2 cut(s) 411, 867
StyD4I CCNGG 2 cut(s) 1768, 1773
StyI CCWWGG 1 cut(s) 610
TaaI ACNGT 5 cut(s) 382, 750, 1066, 1343, 1871
TaiI ACGT 1 cut(s) 1949
TaqI TCGA 2 cut(s) 33, 159
TatI WGTACW 1 cut(s) 1338
TfiI GAWTC 5 cut(s) 449, 945, 1273, 1405, 1824
Tru1I TTAA 5 cut(s) 225, 347, 363, 389, 1334
Tru9I TTAA 5 cut(s) 225, 347, 363, 389, 1334
TscAI CASTG 3 cut(s) 312, 536, 1594
TseI GCWGC 6 cut(s) 179, 206, 209, 333, 644, 1778
TspGWI ACGGA 1 cut(s) 1105
TspRI CASTG 3 cut(s) 312, 536, 1594
XapI RAATTY 2 cut(s) 121, 1817
XceI RCATGY 3 cut(s) 670, 1802, 1903
XmiI GTMKAC 1 cut(s) 620
XmnI GAANNNNTTC 1 cut(s) 474
XspI CTAG 3 cut(s) 1419, 1458, 1727
Zsp2I ATGCAT 1 cut(s) 1609
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.