Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0006710

Physical Location & Seq

Genomic Coordinates Reverse (-)

18209783 .. 18215812

Gene Structure 6030 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1539 bp

ATGCCGACGTACAACATCAGAGGCATCGATGTCGATTTCCCATTTGAGGCGTACGATTGCCAGCTCGTTTACATGAAGAAAGTCATCCAATCTCTCCAAGAAAAAAGTAATGCACTGCTGGAGAGTCCCACTGGAACTGGGAAGACCCTTTGTCTTCTGTGCGCCACATTGGCCTGGAGGAAGAGTTTGGGCCCTTTCTCAACTGGTCCTAATGTCAAGATGAGTGTGATCACAGGTGATGCATCAGGTGGTCCCTCATCACAGTCTGCGACAAAAGGTCTTCCTACCATAGTATACACGTCCCGCACTCACAGCCAGATCCGGCAAGTAATTCAAGAGTTGAAAAGAAGCGCTTACAGGCCAAAAATGGTAGTGTTGGGATCTCGAGAGCAATTATGCATTGATGAGGAAGTGAGTTTACTTCGAGGAAGAACACAGACAAAGGCTTGCCATGTCCTCTGCAGAAAGCGCACAAAGGATACAAAGCGTCGTTGTTCTCATTACTCTCGTGGTTCTGGTTTCTTGAAGAGTAATCCTCATCTTGGAGATGAACCTATTGATATCGAGGATTTGGTCAATACTGGAAAAAAATTGGGGCCGTGTCCTTATTATTTATCGAGGGAGCTCCATAAGGTTGTTGATATATTATTTGCACCTTATAACTATCTCATTGATCCTGCATTTAGAAAATCGCTACAGGTTGATTGGAAAAACAGTATTCTGATATTTGACGAAGCTCACAACCTGGAAAGCATATGTGCAGATGCTGCTTCCTTTGACTTGCCCTCTTGGCTTCTTACAGCTTGCATTTCTGAAGCGAAAAATTGTATTGACCTTTCTTCAAAAAGAAGGGAAGACTCAACTGATAAATCACAGAATCCAGATGACTTTGCTATCCTCAGAGTTAATGATGCATATCTTGCAGCGCTACTATTGAAGCTTGAGAAATGTATTTCTGAAGTACCTATCGAATCCAAGGAATTGGGATACACAAAGCCTGGGCCTTATATCTATGAACTCCTGGCGGATTTAAACATCTCGCATGATACTGTCCCTAAGCTCATTGCAATACTTGAGGACGCTACTGTACTTATTGAGGAAGATAACCAGGACAAGGCGAATCGAAATGCCTGCCGGCTGGAAAGCATTAGTGACATGCTTAATATAATTTTCAGAGATAAAGACAATAATCATGCGAAATCCTATCGTGTTCATGTACAAGAAGTTGAAGCCAGTGCAATAGATGGTTTAAAGGGGAAGGCTTCTAGGACACTTAGCTGGTGGTGTTTTCATCCTGGAATTGCAATGGAAGAATTTGCCAGGATAGGTGTGGGCTCTATTATACTGACATCTGGCACATTATCTCCCTTGGATTCGTTTGCACAGGAACTGAAACTATATGGGCTGGAGTTGTACCAGCTGGCCCTTCTGGATTCTCTTTCAACTCCTCTTACAGAAATCGTGATTCTACGGAGTACAAGCAGGACCTTGGAAATGCTATTGTCAATTTTGCTCGAATTGTTCCCAATGGATTGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000018 GO:0000723 GO:0000725 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006282 GO:0006298 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009555 GO:0009892 GO:0009987 GO:0010569 GO:0010605 GO:0016043 GO:0019219 GO:0019222 GO:0022622 GO:0031323 GO:0031324 GO:0032200 GO:0032501 GO:0032502 GO:0033554 GO:0034641 GO:0034645 GO:0036297 GO:0042592 GO:0043007 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043570 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044424 GO:0044444 GO:0044464 GO:0045005 GO:0045910 GO:0045934 GO:0046483 GO:0048229 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051053 GO:0051171 GO:0051172 GO:0051276 GO:0051716 GO:0060249 GO:0060255 GO:0065007 GO:0065008 GO:0070716 GO:0071704 GO:0071840 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:0099402 GO:1901360 GO:1901576 GO:2000779 GO:2001020

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD_2 Helicase_C_2

Protein Analysis

513

Amino Acids

57.25

Weight (kDa)

6.12

Isoelectric Point (pI)

49.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD_2	PF06733	99 - 262	3.9e-52	DEAD_2
ARCH_RTEL1	PF23109	268 - 432	4.9e-40	RTEL1 helicase, ARCH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006710)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79950 AT1G79950 AT1G79950 AT1G79950 AT1G79950 AT1G79950 AT1G79950
fragaria_vesca	FvH4_6g31180 FvH4_6g31180 FvH4_6g31180 FvH4_6g31180
malus_domestica	MD17G1195000.v1.1
prunus_persica	Prupe.3G071000_v2.0.a1 Prupe.3G071000_v2.0.a1 Prupe.3G071000_v2.0.a1
pyrus_communis	pycom17g20090
rosa_chinensis	RchiOBHm_Chr2g0137871
rosa_laevigata	RLG00000019686
rosa_multiflora	Rmu_sc0002170.1_g000014
rosa_roxburghii	Rroxscaffold_2G00106700
rosa_rugosa	Rorug02G0347600
rosa_samantha	Rh2AG393900 Rh2BG401300 Rh2CG380600 Rh2DG416100
rosa_wichuraiana	Rw2G032240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	660
AccI	GTMKAC	1 cut(s)	294
AciI	CCGC	2 cut(s)	304, 1025
AclWI	GGATC	3 cut(s)	313, 388, 668
AcsI	RAATTY	1 cut(s)	1313
AcuI	CTGAAG	2 cut(s)	834, 978
AfaI	GTAC	7 cut(s)	11, 53, 963, 1089, 1218, 1415, 1477
AfeI	AGCGCT	2 cut(s)	352, 927
AfiI	CCNNNNNNNGG	3 cut(s)	46, 542, 1114
AflIII	ACRYGT	1 cut(s)	297
AgsI	TTSAA	7 cut(s)	335, 343, 526, 843, 937, 1229, 1443
AhdI	GACNNNNNGTC	2 cut(s)	150, 276
AjiI	CACGTC	1 cut(s)	300
AjnI	CCWGG	7 cut(s)	173, 744, 997, 1020, 1107, 1294, 1319
AluBI	AGCT	8 cut(s)	64, 625, 737, 803, 940, 1060, 1278, 1420
AluI	AGCT	8 cut(s)	64, 625, 737, 803, 940, 1060, 1278, 1420
Alw21I	GWGCWC	1 cut(s)	627
AlwI	GGATC	3 cut(s)	313, 388, 668
AlwNI	CAGNNNCTG	2 cut(s)	767, 1390
Ama87I	CYCGRG	1 cut(s)	384
Aor51HI	AGCGCT	2 cut(s)	352, 927
AoxI	GGCC	6 cut(s)	171, 190, 359, 596, 1001, 1422
ApaI	GGGCCC	1 cut(s)	194
ApeKI	GCWGC	2 cut(s)	767, 923
ApoI	RAATTY	1 cut(s)	1313
AspLEI	GCGC	4 cut(s)	164, 353, 471, 928
AspS9I	GGNCC	8 cut(s)	190, 191, 206, 251, 596, 1001, 1423, 1485
AsuHPI	GGTGA	1 cut(s)	248
AvaI	CYCGRG	1 cut(s)	384
AvaII	GGWCC	3 cut(s)	206, 251, 1485
BaeGI	GKGCMC	1 cut(s)	194
BanII	GRGCYC	3 cut(s)	194, 627, 1337
BarI	GAAGNNNNNNTAC	2 cut(s)	402, 434
BauI	CACGAG	1 cut(s)	507
BbsI	GAAGAC	4 cut(s)	146, 149, 272, 861
Bbv12I	GWGCWC	1 cut(s)	627
BbvI	GCAGC	2 cut(s)	754, 935
BccI	CCATC	1 cut(s)	1238
BceAI	ACGGC	1 cut(s)	583
BcgI	CGANNNNNNTGC	4 cut(s)	13, 47, 1113, 1147
BciT130I	CCWGG	7 cut(s)	175, 746, 999, 1022, 1109, 1296, 1321
BciVI	GTATCC	2 cut(s)	472, 980
BclI	TGATCA	1 cut(s)	228
BfaI	CTAG	2 cut(s)	1266, 1537
BfmI	CTRYAG	2 cut(s)	460, 695
BfoI	RGCGCY	2 cut(s)	354, 929
BfuI	GTATCC	2 cut(s)	472, 980
BglI	GCCNNNNNGGC	2 cut(s)	170, 790
BisI	GCNGC	2 cut(s)	768, 924
BlsI	GCNGC	2 cut(s)	769, 925
Bme1390I	CCNGG	7 cut(s)	175, 746, 999, 1022, 1109, 1296, 1321
Bme18I	GGWCC	3 cut(s)	206, 251, 1485
BmeRI	GACNNNNNGTC	2 cut(s)	150, 276
BmeT110I	CYCGRG	1 cut(s)	384
BmgBI	CACGTC	1 cut(s)	300
BmgT120I	GGNCC	8 cut(s)	190, 191, 206, 251, 596, 1001, 1423, 1485
BmiI	GGNNCC	3 cut(s)	192, 253, 597
BmrFI	CCNGG	7 cut(s)	175, 746, 999, 1022, 1109, 1296, 1321
BmrI	ACTGGG	1 cut(s)	147
BmsI	GCATC	5 cut(s)	33, 229, 251, 754, 901
BmuI	ACTGGG	1 cut(s)	147
BpiI	GAAGAC	4 cut(s)	146, 149, 272, 861
BplI	GAGNNNNNCTC	2 cut(s)	520, 552
BpmI	CTGGAG	3 cut(s)	140, 196, 1427
Bpu10I	CCTNAGC	1 cut(s)	1056
BpuEI	CTTGAG	2 cut(s)	962, 1094
Bsa29I	ATCGAT	1 cut(s)	27
BsaBI	GATNNNNATC	1 cut(s)	915
BsaJI	CCNNGG	4 cut(s)	975, 998, 1368, 1488
BsaXI	ACNNNNNCTCC	4 cut(s)	169, 199, 1348, 1378
Bsc4I	CCNNNNNNNGG	3 cut(s)	46, 542, 1114
Bse118I	RCCGGY	1 cut(s)	1134
Bse1I	ACTGG	5 cut(s)	136, 142, 208, 586, 1233
Bse3DI	GCAATG	2 cut(s)	1062, 1311
Bse8I	GATNNNNATC	1 cut(s)	915
BseBI	CCWGG	7 cut(s)	175, 746, 999, 1022, 1109, 1296, 1321
BseCI	ATCGAT	1 cut(s)	27
BseDI	CCNNGG	4 cut(s)	975, 998, 1368, 1488
BseGI	GGATG	2 cut(s)	84, 1291
BseJI	GATNNNNATC	1 cut(s)	915
BseLI	CCNNNNNNNGG	3 cut(s)	46, 542, 1114
BseMI	GCAATG	2 cut(s)	1062, 1311
BseMII	CTCAG	1 cut(s)	913
BseNI	ACTGG	5 cut(s)	136, 142, 208, 586, 1233
BseRI	GAGGAG	1 cut(s)	1437
BseSI	GKGCMC	1 cut(s)	194
BseXI	GCAGC	2 cut(s)	754, 935
BsgI	GTGCAG	1 cut(s)	780
BshFI	GGCC	6 cut(s)	173, 192, 361, 598, 1003, 1424
BshVI	ATCGAT	1 cut(s)	27
BsiHKAI	GWGCWC	1 cut(s)	627
BsiHKCI	CYCGRG	1 cut(s)	384
BsiSI	CCGG	2 cut(s)	322, 1135
BsiWI	CGTACG	1 cut(s)	51
BslFI	GGGAC	4 cut(s)	111, 237, 286, 1037
BslI	CCNNNNNNNGG	3 cut(s)	46, 542, 1114
BsmFI	GGGAC	4 cut(s)	111, 237, 286, 1037
BsnI	GGCC	6 cut(s)	173, 192, 361, 598, 1003, 1424
BsoBI	CYCGRG	1 cut(s)	384
Bsp120I	GGGCCC	1 cut(s)	190
Bsp1286I	GDGCHC	3 cut(s)	194, 627, 1337
Bsp1407I	TGTACA	1 cut(s)	1216
Bsp143I	GATC	4 cut(s)	228, 318, 380, 673
BspACI	CCGC	2 cut(s)	304, 1025
BspANI	GGCC	6 cut(s)	173, 192, 361, 598, 1003, 1424
BspCNI	CTCAG	1 cut(s)	912
BspDI	ATCGAT	1 cut(s)	27
BspLI	GGNNCC	3 cut(s)	192, 253, 597
BspMAI	CTGCAG	1 cut(s)	464
BspPI	GGATC	3 cut(s)	313, 388, 668
BsrDI	GCAATG	2 cut(s)	1062, 1311
BsrFI	RCCGGY	1 cut(s)	1134
BsrGI	TGTACA	1 cut(s)	1216
BsrI	ACTGG	5 cut(s)	136, 142, 208, 586, 1233
BssAI	RCCGGY	1 cut(s)	1134
BssECI	CCNNGG	4 cut(s)	975, 998, 1368, 1488
BssMI	GATC	4 cut(s)	228, 318, 380, 673
BssNAI	GTATAC	1 cut(s)	295
BssSI	CACGAG	1 cut(s)	507
BssT1I	CCWWGG	3 cut(s)	975, 1368, 1488
Bst1107I	GTATAC	1 cut(s)	295
Bst2BI	CACGAG	1 cut(s)	507
Bst2UI	CCWGG	7 cut(s)	175, 746, 999, 1022, 1109, 1296, 1321
Bst4CI	ACNGT	4 cut(s)	264, 716, 1051, 1087
Bst6I	CTCTTC	2 cut(s)	176, 521
BstAPI	GCANNNNNTGC	2 cut(s)	767, 920
BstAUI	TGTACA	1 cut(s)	1216
BstC8I	GCNNGC	6 cut(s)	62, 448, 805, 1132, 1136, 1422
BstDEI	CTNAG	3 cut(s)	899, 1056, 1274
BstF5I	GGATG	2 cut(s)	84, 1291
BstH2I	RGCGCY	2 cut(s)	354, 929
BstHHI	GCGC	4 cut(s)	164, 353, 471, 928
BstKTI	GATC	4 cut(s)	231, 321, 383, 676
BstMBI	GATC	4 cut(s)	228, 318, 380, 673
BstMWI	GCNNNNNNNGC	6 cut(s)	170, 312, 468, 767, 790, 920
BstNI	CCWGG	7 cut(s)	175, 746, 999, 1022, 1109, 1296, 1321
BstNSI	RCATGY	1 cut(s)	1159
BstSCI	CCNGG	7 cut(s)	173, 744, 997, 1020, 1107, 1294, 1319
BstSFI	CTRYAG	2 cut(s)	460, 695
BstSLI	GKGCMC	1 cut(s)	194
BstV1I	GCAGC	2 cut(s)	754, 935
BstV2I	GAAGAC	4 cut(s)	146, 149, 272, 861
BstX2I	RGATCY	2 cut(s)	318, 380
BstXI	CCANNNNNNTGG	1 cut(s)	982
BstYI	RGATCY	2 cut(s)	318, 380
BstZ17I	GTATAC	1 cut(s)	295
Bsu15I	ATCGAT	1 cut(s)	27
BsuI	GTATCC	2 cut(s)	472, 980
BsuRI	GGCC	6 cut(s)	173, 192, 361, 598, 1003, 1424
BsuTUI	ATCGAT	1 cut(s)	27
BtrI	CACGTC	1 cut(s)	300
BtsCI	GGATG	2 cut(s)	84, 1291
BtsI	GCAGTG	1 cut(s)	113
BtsIMutI	CAGTG	3 cut(s)	113, 129, 1240
Cac8I	GCNNGC	6 cut(s)	62, 448, 805, 1132, 1136, 1422
CaiI	CAGNNNCTG	2 cut(s)	767, 1390
CfoI	GCGC	4 cut(s)	164, 353, 471, 928
Cfr10I	RCCGGY	1 cut(s)	1134
Cfr13I	GGNCC	8 cut(s)	190, 191, 206, 251, 596, 1001, 1423, 1485
ClaI	ATCGAT	1 cut(s)	27
CseI	GACGC	2 cut(s)	476, 1088
Csp6I	GTAC	7 cut(s)	10, 52, 962, 1088, 1217, 1414, 1476
CviAII	CATG	6 cut(s)	73, 452, 1043, 1156, 1193, 1214
CviQI	GTAC	7 cut(s)	10, 52, 962, 1088, 1217, 1414, 1476
DdeI	CTNAG	3 cut(s)	899, 1056, 1274
DpnI	GATC	4 cut(s)	230, 320, 382, 675
DpnII	GATC	4 cut(s)	228, 318, 380, 673
DraI	TTTAAA	2 cut(s)	1032, 1251
DriI	GACNNNNNGTC	2 cut(s)	150, 276
Eam1104I	CTCTTC	2 cut(s)	176, 521
Eam1105I	GACNNNNNGTC	2 cut(s)	150, 276
EarI	CTCTTC	2 cut(s)	176, 521
EciI	GGCGGA	1 cut(s)	1040
Ecl136II	GAGCTC	1 cut(s)	625
Eco130I	CCWWGG	3 cut(s)	975, 1368, 1488
Eco24I	GRGCYC	3 cut(s)	194, 627, 1337
Eco32I	GATATC	1 cut(s)	562
Eco47I	GGWCC	3 cut(s)	206, 251, 1485
Eco47III	AGCGCT	2 cut(s)	352, 927
Eco53kI	GAGCTC	1 cut(s)	625
Eco57I	CTGAAG	2 cut(s)	834, 978
Eco88I	CYCGRG	1 cut(s)	384
EcoICRI	GAGCTC	1 cut(s)	625
EcoO109I	RGGNCCY	2 cut(s)	191, 1485
EcoRII	CCWGG	7 cut(s)	173, 744, 997, 1020, 1107, 1294, 1319
EcoRV	GATATC	1 cut(s)	562
EcoT14I	CCWWGG	3 cut(s)	975, 1368, 1488
EcoT22I	ATGCAT	3 cut(s)	244, 401, 916
EcoT38I	GRGCYC	3 cut(s)	194, 627, 1337
ErhI	CCWWGG	3 cut(s)	975, 1368, 1488
FaeI	CATG	6 cut(s)	76, 455, 1046, 1159, 1196, 1217
FalI	AAGNNNNNCTT	2 cut(s)	337, 369
FaqI	GGGAC	4 cut(s)	111, 237, 286, 1037
FatI	CATG	6 cut(s)	72, 451, 1042, 1155, 1192, 1213
FauI	CCCGC	1 cut(s)	311
FauNDI	CATATG	1 cut(s)	755
FbaI	TGATCA	1 cut(s)	228
FblI	GTMKAC	1 cut(s)	294
Fnu4HI	GCNGC	2 cut(s)	768, 924
FokI	GGATG	2 cut(s)	71, 1278
FriOI	GRGCYC	3 cut(s)	194, 627, 1337
Fsp4HI	GCNGC	2 cut(s)	768, 924
FspBI	CTAG	2 cut(s)	1266, 1537
GlaI	GCGC	4 cut(s)	163, 352, 470, 927
GluI	GCNGC	2 cut(s)	768, 924
GsuI	CTGGAG	3 cut(s)	140, 196, 1427
HaeII	RGCGCY	2 cut(s)	354, 929
HaeIII	GGCC	6 cut(s)	173, 192, 361, 598, 1003, 1424
HapII	CCGG	2 cut(s)	322, 1135
HgaI	GACGC	2 cut(s)	476, 1088
HhaI	GCGC	4 cut(s)	164, 353, 471, 928
Hin1II	CATG	6 cut(s)	76, 455, 1046, 1159, 1196, 1217
Hin6I	GCGC	4 cut(s)	162, 351, 469, 926
HinP1I	GCGC	4 cut(s)	162, 351, 469, 926
HindIII	AAGCTT	1 cut(s)	938
HinfI	GANTC	8 cut(s)	124, 857, 877, 971, 1120, 1373, 1433, 1465
HpaII	CCGG	2 cut(s)	322, 1135
HphI	GGTGA	1 cut(s)	248
Hpy166II	GTNNAC	3 cut(s)	70, 295, 419
Hpy188I	TCNGA	6 cut(s)	20, 723, 814, 902, 958, 1175
Hpy188III	TCNNGA	8 cut(s)	217, 335, 384, 386, 523, 881, 1430, 1462
Hpy8I	GTNNAC	3 cut(s)	70, 295, 419
Hpy99I	CGWCG	2 cut(s)	10, 492
HpyAV	CCTTC	3 cut(s)	843, 1252, 1436
HpyCH4III	ACNGT	4 cut(s)	264, 716, 1051, 1087
HpyCH4IV	ACGT	2 cut(s)	8, 299
HpyF10VI	GCNNNNNNNGC	6 cut(s)	170, 312, 468, 767, 790, 920
HpyF3I	CTNAG	3 cut(s)	899, 1056, 1274
HpySE526I	ACGT	2 cut(s)	8, 299
Hsp92II	CATG	6 cut(s)	76, 455, 1046, 1159, 1196, 1217
HspAI	GCGC	4 cut(s)	162, 351, 469, 926
KroI	GCCGGC	1 cut(s)	1134
KroNI	GCCGGC	1 cut(s)	1136
Ksp22I	TGATCA	1 cut(s)	228
Kzo9I	GATC	4 cut(s)	228, 318, 380, 673
LmnI	GCTCC	2 cut(s)	622, 630
Lsp1109I	GCAGC	2 cut(s)	754, 935
LweI	GCATC	5 cut(s)	33, 229, 251, 754, 901
MaeI	CTAG	2 cut(s)	1266, 1537
MaeII	ACGT	2 cut(s)	8, 299
MaeIII	GTNAC	1 cut(s)	1151
MalI	GATC	4 cut(s)	230, 320, 382, 675
MboI	GATC	4 cut(s)	228, 318, 380, 673
MflI	RGATCY	2 cut(s)	318, 380
MhlI	GDGCHC	3 cut(s)	194, 627, 1337
MlyI	GAGTC	2 cut(s)	133, 851
Mph1103I	ATGCAT	3 cut(s)	244, 401, 916
MroNI	GCCGGC	1 cut(s)	1134
MseI	TTAA	4 cut(s)	906, 1031, 1161, 1250
MspA1I	CMGCKG	1 cut(s)	1420
MspI	CCGG	2 cut(s)	322, 1135
MspR9I	CCNGG	7 cut(s)	175, 746, 999, 1022, 1109, 1296, 1321
MvaI	CCWGG	7 cut(s)	175, 746, 999, 1022, 1109, 1296, 1321
MwoI	GCNNNNNNNGC	6 cut(s)	170, 312, 468, 767, 790, 920
NaeI	GCCGGC	1 cut(s)	1136
NdeI	CATATG	1 cut(s)	755
NdeII	GATC	4 cut(s)	228, 318, 380, 673
NgoMIV	GCCGGC	1 cut(s)	1134
NlaIII	CATG	6 cut(s)	76, 455, 1046, 1159, 1196, 1217
NlaIV	GGNNCC	3 cut(s)	192, 253, 597
NmuCI	GTSAC	1 cut(s)	1151
NsiI	ATGCAT	3 cut(s)	244, 401, 916
NspI	RCATGY	1 cut(s)	1159
PaeR7I	CTCGAG	1 cut(s)	384
PdiI	GCCGGC	1 cut(s)	1136
PfeI	GAWTC	6 cut(s)	877, 971, 1120, 1373, 1433, 1465
Pfl23II	CGTACG	1 cut(s)	51
PfoI	TCCNGGA	1 cut(s)	1294
PkrI	GCNGC	2 cut(s)	769, 925
PleI	GAGTC	2 cut(s)	132, 851
PpsI	GAGTC	2 cut(s)	132, 851
PpuMI	RGGWCCY	1 cut(s)	1485
PsiI	TTATAA	1 cut(s)	660
Psp124BI	GAGCTC	1 cut(s)	627
Psp5II	RGGWCCY	1 cut(s)	1485
Psp6I	CCWGG	7 cut(s)	173, 744, 997, 1020, 1107, 1294, 1319
PspGI	CCWGG	7 cut(s)	173, 744, 997, 1020, 1107, 1294, 1319
PspLI	CGTACG	1 cut(s)	51
PspN4I	GGNNCC	3 cut(s)	192, 253, 597
PspOMI	GGGCCC	1 cut(s)	190
PspPI	GGNCC	8 cut(s)	190, 191, 206, 251, 596, 1001, 1423, 1485
PspPPI	RGGWCCY	1 cut(s)	1485
PstI	CTGCAG	1 cut(s)	464
PstNI	CAGNNNCTG	2 cut(s)	767, 1390
PsuI	RGATCY	2 cut(s)	318, 380
PvuII	CAGCTG	1 cut(s)	1420
RsaI	GTAC	7 cut(s)	11, 53, 963, 1089, 1218, 1415, 1477
RsaNI	GTAC	7 cut(s)	10, 52, 962, 1088, 1217, 1414, 1476
SacI	GAGCTC	1 cut(s)	627
SaqAI	TTAA	4 cut(s)	906, 1031, 1161, 1250
SatI	GCNGC	2 cut(s)	768, 924
Sau3AI	GATC	4 cut(s)	228, 318, 380, 673
Sau96I	GGNCC	8 cut(s)	190, 191, 206, 251, 596, 1001, 1423, 1485
SchI	GAGTC	2 cut(s)	133, 851
ScrFI	CCNGG	7 cut(s)	175, 746, 999, 1022, 1109, 1296, 1321
SduI	GDGCHC	3 cut(s)	194, 627, 1337
SfaNI	GCATC	5 cut(s)	33, 229, 251, 754, 901
SfcI	CTRYAG	2 cut(s)	460, 695
Sfr274I	CTCGAG	1 cut(s)	384
SinI	GGWCC	3 cut(s)	206, 251, 1485
SlaI	CTCGAG	1 cut(s)	384
SmlI	CTYRAG	3 cut(s)	384, 941, 1073
SmoI	CTYRAG	3 cut(s)	384, 941, 1073
SsiI	CCGC	2 cut(s)	304, 1025
SspMI	CTAG	2 cut(s)	1266, 1537
SstI	GAGCTC	1 cut(s)	627
StyD4I	CCNGG	7 cut(s)	173, 744, 997, 1020, 1107, 1294, 1319
StyI	CCWWGG	3 cut(s)	975, 1368, 1488
TaaI	ACNGT	4 cut(s)	264, 716, 1051, 1087
TaiI	ACGT	2 cut(s)	11, 302
TaqI	TCGA	9 cut(s)	27, 33, 385, 424, 564, 617, 969, 1123, 1515
TatI	WGTACW	3 cut(s)	1087, 1216, 1475
TfiI	GAWTC	6 cut(s)	877, 971, 1120, 1373, 1433, 1465
Tru1I	TTAA	4 cut(s)	906, 1031, 1161, 1250
Tru9I	TTAA	4 cut(s)	906, 1031, 1161, 1250
TscAI	CASTG	3 cut(s)	120, 136, 1240
TseFI	GTSAC	1 cut(s)	1151
TseI	GCWGC	2 cut(s)	767, 923
Tsp45I	GTSAC	1 cut(s)	1151
TspDTI	ATGAA	5 cut(s)	89, 564, 1029, 1202, 1280
TspGWI	ACGGA	1 cut(s)	1486
TspRI	CASTG	3 cut(s)	120, 136, 1240
VpaK11BI	GGWCC	3 cut(s)	206, 251, 1485
XapI	RAATTY	1 cut(s)	1313
XceI	RCATGY	1 cut(s)	1159
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1327
XhoI	CTCGAG	1 cut(s)	384
XmiI	GTMKAC	1 cut(s)	294
XspI	CTAG	2 cut(s)	1266, 1537
Zsp2I	ATGCAT	3 cut(s)	244, 401, 916

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.