Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0010176

Physical Location & Seq

Genomic Coordinates Forward (+)

18250779 .. 18253360

Gene Structure 2582 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1968 bp

ATGGTAAAATTGGTTGCAAATTCGTTTGCTTTAAAGCGGTGCATATCAACCTCTCCTCATCTGTCTGGGAGAATTAATCAAACAGAAGGTGAGATAGTCAAAATGTTCCAGTTGCCTAGAGCAGCATCTGGGGAAGAGCGAAACTTTCCCATGAGTAGAAACATGTCAAAGAAGGACCCTTCAGTTAGGATGTTGGATGAGAGATTCACAAAGATTTTAAAAATTTTCAAGTGGGGACCTGATGCAGAAAAGGCACTGGAAGTTCTGAAGCTGAGAGTCGATCACCGATTGGTTGTCGCGGTTCTCAAGATTGATGTGGATGTCAATGTTAAGGTTCAGTTTTTCAAGTGGGCTGGGAAGAGAAGGAATTTCCAACACGATTCAACCACGTACATGGCATTGATCCGCTGCTTGGACGAGGCTGGTGCGTTTGGTGAAATGTGGAGAACAATCCAAGAAATGGCTCGGAGTGCACGCATTATTGAGCCAGCTGAGTTATCCGAAATCATAAGAGTCTTGGGCAGGGCTAAGATGGTGAACAAGGCATTATCTGTGTTTTACCAGGTCAAAGGCCACAAGTGCAAACCAACTGCAAATACTTACAACTCCATGATCTTAATGCTGATGCAAGAAGGGCATAACGACAAGGTCCATGAGCTCTACAATGAGATGTGTAACGAGGATAACTGTTTCCCAGACACAGTTACATACAGTGCACTGATATCCGCATTTGGGAAATTGGGTCGTGATGATTCTGCCATTAGGTTGTTTGATGAGATGAAGGATAATGGTTTACATCCAACTGCAAAGATATACACTACCTTATTGGCAATTTTTTTCAAGTTAAGCAAAGTTGAGCAAGCCTTAAGCCTAGCACAGGAGATGAAAGAGAAGGGGTGCCCGCCTACTGTTTTCACTTACACTGAATTGATAAAGGGGCTTGGCAGAGCGGGGAGAGTAGACGATGCTTATGCTATATACAAAAACCTTCTGAGGGAGGGTTGTAAGCCTGATGTTGTGCTCATGAACAATTTGATAAACATCTTGGGAAAGGAAGGTCGTATAGAAGATGCTATTAAGATTTTCAACGAGATGTCATCCTTGCATTGCACACCTAATGTGGTGACTTATAACACTGTAATCAAAGCGTTATTTGAATCCAGAGCTCCAGCTTCCGAGGCAGCTTCCTGGTTTGAGAAGATGAAGGTTAATGGCATTGTTCCCAGTTCATTTACCTATTCAATTCTTATTGATGGTTTTTGCAAAACAAATAGAGTAGAGAAAGCTTTGTTGCTTCTCGAAGAGATGGATGAGAAGGGTTTTCCACCTTGTCCAGCTGCCTATTGCAGCCTGATCAACAGTCTTGGAAAAGCAAAGCGGTACGATGCTGCAAATGAGTTATTCCAAGAATTGAAAGAAAATTGTGGTCGTTCAAGTGCTAGGGTATATGCTGTGATGATTAAACATTTTGGGAAATGTGGGCGTCTTGATGATGCTGTGGATCTTTTTAACGAGATGAAGAAACTAGGATGCAGTCCAGATGTGTATGCTTATAATGCGCTCATGTCAGGGATGGTGAGGGCTGATATGATAGATGAAGCACATTCCTTGCTTAAAGTCATGGAAGAAAACGGCTGCATTCCTGACCTAAACTCACATAACATTATTTTGAATGGCTTGGCTAGGACGGGTGGCCCAAATCGGGCTTTGGAAATGTTTTCCAAAATGAAGCATTCTAAGATTGAACCAGATGCGGTTACTTATAACACTATTCTTGGTTGTCTAAGCCGAGCTGGTTTGCTTGAAGAGGCTGCAAAGCTGATGAAAGAGATGGATTCAAAAGGTTTTGAATATGATTTCATTACGTACTCGTCGATTCTTGAGGCAGTCGGCAAGGTTGATGACATTCATAAGTCTTCCTCAGGGGGATCTGGTGTGACGTCACACATCCTATTAAGTGCCAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

656

Amino Acids

73.29

Weight (kDa)

8.41

Isoelectric Point (pI)

34.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_long	PF17177	178 - 277	3.1e-06	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	200 - 246	7.1e-11	PPR repeat family
PPR_3	PF13812	225 - 278	8.6e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	229 - 261	3.7e-10	PPR repeat
PPR_2	PF13041	232 - 269	9.1e-09	PPR repeat family
TPR_24	PF23276	234 - 329	7.4e-06	Fungal tetratrico peptide repeats
PPR	PF01535	235 - 265	6.1e-08	PPR repeat
PPR_long	PF17177	252 - 353	1e-05	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	255 - 315	3.6e-10	Pentatricopeptide repeat domain
PPR_2	PF13041	267 - 315	1.1e-12	PPR repeat family
PPR_1	PF12854	298 - 325	1.2e-08	PPR repeat
PPR_2	PF13041	302 - 340	6.5e-08	PPR repeat family
PPR_3	PF13812	326 - 383	1.5e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	334 - 366	1.1e-07	PPR repeat
PPR_2	PF13041	337 - 385	3.4e-16	PPR repeat family
PPR_long	PF17177	354 - 485	8e-07	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	372 - 422	9.2e-16	PPR repeat family
TPR_24	PF23276	400 - 506	2.4e-08	Fungal tetratrico peptide repeats
PPR_1	PF12854	404 - 436	1.3e-11	PPR repeat
PPR	PF01535	411 - 441	2.9e-08	PPR repeat
PPR_2	PF13041	415 - 455	3e-07	PPR repeat family
PPR_long	PF17177	464 - 594	3.5e-06	Pentacotripeptide-repeat region of PRORP
PPR	PF01535	482 - 511	9.4e-07	PPR repeat
PPR_2	PF13041	482 - 526	2e-14	PPR repeat family
PPR_3	PF13812	502 - 558	3.5e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	510 - 542	4.4e-06	PPR repeat
PPR_2	PF13041	513 - 562	7.3e-13	PPR repeat family
PPR	PF01535	517 - 546	4.7e-06	PPR repeat
PPR_3	PF13812	537 - 594	2.6e-09	Pentatricopeptide repeat domain
PPR_2	PF13041	554 - 595	2.7e-10	PPR repeat family
PPR_1	PF12854	581 - 611	1.3e-08	PPR repeat
PPR_2	PF13041	583 - 629	5.6e-12	PPR repeat family
PPR	PF01535	586 - 616	2.6e-07	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0010176)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G16010
fragaria_vesca	FvH4_6g31160
malus_domestica	MD17G1195500.v1.1
prunus_persica	Prupe.3G071400_v2.0.a1
pyrus_communis	pycom17g20110
rosa_chinensis	RchiOBHm_Chr2g0137841
rosa_laevigata	RLG00000019680
rosa_multiflora	Rmu_co8002616.1_g000001 Rmu_sc0002170.1_g000007 Rmu_sc0007548.1_g000006
rosa_roxburghii	Rroxscaffold_2G00106770
rosa_rugosa	Rorug02G0346600 Rorug02G0346700 Rorug02G0346800 Rorug02G0346900 Rorug02G0347000
rosa_samantha	Rh2AG393400 Rh2BG400900 Rh2CG380100 Rh2DG415900
rosa_wichuraiana	Rw2G032220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	1131, 1554, 1764
AatII	GACGTC	1 cut(s)	1943
AccB1I	GGYRCC	1 cut(s)	897
AccB7I	CCANNNNNTGG	1 cut(s)	460
AccBSI	CCGCTC	1 cut(s)	950
AccI	GTMKAC	1 cut(s)	960
AccII	CGCG	1 cut(s)	299
AciI	CCGC	8 cut(s)	37, 299, 406, 726, 902, 950, 1378, 1754
AclWI	GGATC	3 cut(s)	397, 1509, 1936
AcsI	RAATTY	3 cut(s)	19, 222, 367
AcuI	CTGAAG	2 cut(s)	165, 287
AcyI	GRCGYC	2 cut(s)	1483, 1940
AfaI	GTAC	3 cut(s)	392, 1382, 1868
AfiI	CCNNNNNNNGG	6 cut(s)	412, 460, 732, 877, 994, 1702
AflII	CTTAAG	1 cut(s)	865
AflIII	ACRYGT	1 cut(s)	162
AjnI	CCWGG	2 cut(s)	561, 1187
Alw21I	GWGCWC	5 cut(s)	475, 660, 718, 1023, 1168
Alw44I	GTGCAC	2 cut(s)	471, 714
AlwI	GGATC	3 cut(s)	397, 1509, 1936
AlwNI	CAGNNNCTG	1 cut(s)	128
AoxI	GGCC	2 cut(s)	571, 1693
ApaLI	GTGCAC	2 cut(s)	471, 714
ApeKI	GCWGC	8 cut(s)	122, 408, 1181, 1337, 1347, 1388, 1635, 1811
ApoI	RAATTY	3 cut(s)	19, 222, 367
AseI	ATTAAT	1 cut(s)	75
AspLEI	GCGC	1 cut(s)	1561
AspS9I	GGNCC	4 cut(s)	175, 236, 649, 1694
AsuHPI	GGTGA	6 cut(s)	101, 275, 446, 547, 1135, 1588
AvaII	GGWCC	3 cut(s)	175, 236, 649
AxyI	CCTNAGG	1 cut(s)	1921
BaeGI	GKGCMC	3 cut(s)	475, 718, 902
BanI	GGYRCC	1 cut(s)	897
BanII	GRGCYC	2 cut(s)	660, 1168
BbsI	GAAGAC	1 cut(s)	1908
Bbv12I	GWGCWC	5 cut(s)	475, 660, 718, 1023, 1168
BbvI	GCAGC	8 cut(s)	134, 395, 1193, 1324, 1359, 1375, 1622, 1798
BccI	CCATC	5 cut(s)	526, 1247, 1300, 1567, 1825
BceAI	ACGGC	1 cut(s)	1648
BcgI	CGANNNNNNTGC	4 cut(s)	407, 441, 953, 987
BciT130I	CCWGG	2 cut(s)	563, 1189
BclI	TGATCA	1 cut(s)	1353
BfaI	CTAG	5 cut(s)	117, 872, 1440, 1526, 1683
BfrI	CTTAAG	1 cut(s)	865
BisI	GCNGC	8 cut(s)	123, 409, 1182, 1338, 1348, 1389, 1636, 1812
BlsI	GCNGC	8 cut(s)	124, 410, 1183, 1339, 1349, 1390, 1637, 1813
Bme1390I	CCNGG	2 cut(s)	563, 1189
Bme18I	GGWCC	3 cut(s)	175, 236, 649
BmgT120I	GGNCC	4 cut(s)	175, 236, 649, 1694
BmiI	GGNNCC	3 cut(s)	177, 237, 899
BmrFI	CCNGG	2 cut(s)	563, 1189
BmrI	ACTGGG	1 cut(s)	1218
BmsI	GCATC	9 cut(s)	134, 232, 615, 955, 1060, 1375, 1483, 1520, 1741
BmuI	ACTGGG	1 cut(s)	1218
BpiI	GAAGAC	1 cut(s)	1908
BpmI	CTGGAG	1 cut(s)	1152
BpuEI	CTTGAG	2 cut(s)	290, 1901
BsaAI	YACGTR	2 cut(s)	390, 1866
BsaBI	GATNNNNATC	1 cut(s)	1040
BsaHI	GRCGYC	2 cut(s)	1483, 1940
BsaJI	CCNNGG	1 cut(s)	1176
Bsc4I	CCNNNNNNNGG	6 cut(s)	412, 460, 732, 877, 994, 1702
Bse1I	ACTGG	3 cut(s)	109, 261, 1224
Bse21I	CCTNAGG	1 cut(s)	1921
Bse3DI	GCAATG	1 cut(s)	1105
Bse8I	GATNNNNATC	1 cut(s)	1040
BseBI	CCWGG	2 cut(s)	563, 1189
BseDI	CCNNGG	1 cut(s)	1176
BseGI	GGATG	9 cut(s)	195, 202, 325, 796, 1097, 1315, 1535, 1578, 1947
BseJI	GATNNNNATC	1 cut(s)	1040
BseLI	CCNNNNNNNGG	6 cut(s)	412, 460, 732, 877, 994, 1702
BseMI	GCAATG	1 cut(s)	1105
BseMII	CTCAG	4 cut(s)	263, 483, 983, 1935
BseNI	ACTGG	3 cut(s)	109, 261, 1224
BseRI	GAGGAG	1 cut(s)	45
BseSI	GKGCMC	3 cut(s)	475, 718, 902
BseXI	GCAGC	8 cut(s)	134, 395, 1193, 1324, 1359, 1375, 1622, 1798
BseYI	CCCAGC	1 cut(s)	353
Bsh1236I	CGCG	1 cut(s)	299
BshFI	GGCC	2 cut(s)	573, 1695
BshNI	GGYRCC	1 cut(s)	897
BsiHKAI	GWGCWC	5 cut(s)	475, 660, 718, 1023, 1168
BslFI	GGGAC	1 cut(s)	249
BslI	CCNNNNNNNGG	6 cut(s)	412, 460, 732, 877, 994, 1702
BsmFI	GGGAC	1 cut(s)	249
BsmI	GAATGC	2 cut(s)	1638, 1732
BsnI	GGCC	2 cut(s)	573, 1695
Bsp1286I	GDGCHC	6 cut(s)	475, 660, 718, 902, 1023, 1168
Bsp143I	GATC	6 cut(s)	280, 402, 612, 1353, 1501, 1928
BspACI	CCGC	8 cut(s)	37, 299, 406, 726, 902, 950, 1378, 1754
BspANI	GGCC	2 cut(s)	573, 1695
BspCNI	CTCAG	4 cut(s)	264, 484, 984, 1934
BspFNI	CGCG	1 cut(s)	299
BspHI	TCATGA	1 cut(s)	1023
BspLI	GGNNCC	3 cut(s)	177, 237, 899
BspPI	GGATC	3 cut(s)	397, 1509, 1936
BspQI	GCTCTTC	1 cut(s)	129
BspT107I	GGYRCC	1 cut(s)	897
BspTI	CTTAAG	1 cut(s)	865
BsrBI	CCGCTC	1 cut(s)	950
BsrDI	GCAATG	1 cut(s)	1105
BsrI	ACTGG	3 cut(s)	109, 261, 1224
BssECI	CCNNGG	1 cut(s)	1176
BssMI	GATC	6 cut(s)	280, 402, 612, 1353, 1501, 1928
BssNI	GRCGYC	2 cut(s)	1483, 1940
Bst2UI	CCWGG	2 cut(s)	563, 1189
Bst4CI	ACNGT	6 cut(s)	689, 703, 713, 910, 1138, 1361
Bst6I	CTCTTC	4 cut(s)	129, 353, 1296, 1800
BstACI	GRCGYC	2 cut(s)	1483, 1940
BstAFI	CTTAAG	1 cut(s)	865
BstBAI	YACGTR	2 cut(s)	390, 1866
BstC8I	GCNNGC	5 cut(s)	475, 489, 861, 902, 1963
BstDEI	CTNAG	7 cut(s)	272, 492, 528, 992, 1737, 1784, 1921
BstENI	CCTNNNNNAGG	1 cut(s)	875
BstF5I	GGATG	9 cut(s)	195, 202, 325, 796, 1097, 1315, 1535, 1578, 1947
BstFNI	CGCG	1 cut(s)	299
BstHHI	GCGC	1 cut(s)	1561
BstKTI	GATC	6 cut(s)	283, 405, 615, 1356, 1504, 1931
BstMBI	GATC	6 cut(s)	280, 402, 612, 1353, 1501, 1928
BstMWI	GCNNNNNNNGC	6 cut(s)	251, 470, 579, 634, 1178, 1556
BstNI	CCWGG	2 cut(s)	563, 1189
BstNSI	RCATGY	1 cut(s)	166
BstSCI	CCNGG	2 cut(s)	561, 1187
BstSLI	GKGCMC	3 cut(s)	475, 718, 902
BstSNI	TACGTA	1 cut(s)	1866
BstUI	CGCG	1 cut(s)	299
BstV1I	GCAGC	8 cut(s)	134, 395, 1193, 1324, 1359, 1375, 1622, 1798
BstV2I	GAAGAC	1 cut(s)	1908
BstX2I	RGATCY	2 cut(s)	1501, 1928
BstXI	CCANNNNNNTGG	1 cut(s)	394
BstYI	RGATCY	2 cut(s)	1501, 1928
Bsu36I	CCTNAGG	1 cut(s)	1921
BsuRI	GGCC	2 cut(s)	573, 1695
BtsCI	GGATG	9 cut(s)	195, 202, 325, 796, 1097, 1315, 1535, 1578, 1947
BtsIMutI	CAGTG	5 cut(s)	254, 716, 718, 921, 1134
Cac8I	GCNNGC	5 cut(s)	475, 489, 861, 902, 1963
CaiI	CAGNNNCTG	1 cut(s)	128
CciI	TCATGA	1 cut(s)	1023
CfoI	GCGC	1 cut(s)	1561
Cfr13I	GGNCC	4 cut(s)	175, 236, 649, 1694
CseI	GACGC	1 cut(s)	1472
CsiI	ACCWGGT	1 cut(s)	561
Csp6I	GTAC	3 cut(s)	391, 1381, 1867
CviAII	CATG	8 cut(s)	151, 163, 394, 610, 653, 1024, 1564, 1621
CviQI	GTAC	3 cut(s)	391, 1381, 1867
DdeI	CTNAG	7 cut(s)	272, 492, 528, 992, 1737, 1784, 1921
DpnI	GATC	6 cut(s)	282, 404, 614, 1355, 1503, 1930
DpnII	GATC	6 cut(s)	280, 402, 612, 1353, 1501, 1928
DraI	TTTAAA	2 cut(s)	33, 219
Eam1104I	CTCTTC	4 cut(s)	129, 353, 1296, 1800
EarI	CTCTTC	4 cut(s)	129, 353, 1296, 1800
Ecl136II	GAGCTC	2 cut(s)	658, 1166
Eco105I	TACGTA	1 cut(s)	1866
Eco24I	GRGCYC	2 cut(s)	660, 1168
Eco32I	GATATC	1 cut(s)	723
Eco47I	GGWCC	3 cut(s)	175, 236, 649
Eco53kI	GAGCTC	2 cut(s)	658, 1166
Eco57I	CTGAAG	2 cut(s)	165, 287
Eco81I	CCTNAGG	1 cut(s)	1921
EcoICRI	GAGCTC	2 cut(s)	658, 1166
EcoNI	CCTNNNNNAGG	1 cut(s)	875
EcoO109I	RGGNCCY	2 cut(s)	175, 236
EcoRII	CCWGG	2 cut(s)	561, 1187
EcoRV	GATATC	1 cut(s)	723
EcoT38I	GRGCYC	2 cut(s)	660, 1168
FaeI	CATG	8 cut(s)	154, 166, 397, 613, 656, 1027, 1567, 1624
FaqI	GGGAC	1 cut(s)	249
FatI	CATG	8 cut(s)	150, 162, 393, 609, 652, 1023, 1563, 1620
FauI	CCCGC	2 cut(s)	909, 943
FbaI	TGATCA	1 cut(s)	1353
FblI	GTMKAC	1 cut(s)	960
Fnu4HI	GCNGC	8 cut(s)	123, 409, 1182, 1338, 1348, 1389, 1636, 1812
FokI	GGATG	9 cut(s)	202, 209, 332, 783, 1084, 1322, 1542, 1585, 1934
FriOI	GRGCYC	2 cut(s)	660, 1168
Fsp4HI	GCNGC	8 cut(s)	123, 409, 1182, 1338, 1348, 1389, 1636, 1812
FspBI	CTAG	5 cut(s)	117, 872, 1440, 1526, 1683
GlaI	GCGC	1 cut(s)	1560
GluI	GCNGC	8 cut(s)	123, 409, 1182, 1338, 1348, 1389, 1636, 1812
GsaI	CCCAGC	1 cut(s)	357
GsuI	CTGGAG	1 cut(s)	1152
HaeIII	GGCC	2 cut(s)	573, 1695
HgaI	GACGC	1 cut(s)	1472
HhaI	GCGC	1 cut(s)	1561
Hin1I	GRCGYC	2 cut(s)	1483, 1940
Hin1II	CATG	8 cut(s)	154, 166, 397, 613, 656, 1027, 1567, 1624
Hin6I	GCGC	1 cut(s)	1559
HinP1I	GCGC	1 cut(s)	1559
HindIII	AAGCTT	1 cut(s)	1284
HinfI	GANTC	8 cut(s)	204, 276, 380, 513, 752, 1157, 1835, 1876
HphI	GGTGA	6 cut(s)	101, 275, 446, 547, 1135, 1588
Hpy166II	GTNNAC	5 cut(s)	473, 538, 716, 794, 961
Hpy188I	TCNGA	5 cut(s)	267, 468, 502, 993, 1177
Hpy188III	TCNNGA	9 cut(s)	307, 746, 1024, 1161, 1298, 1487, 1538, 1643, 1880
Hpy8I	GTNNAC	5 cut(s)	473, 538, 716, 794, 961
Hpy99I	CGWCG	1 cut(s)	1876
HpyCH4III	ACNGT	6 cut(s)	689, 703, 713, 910, 1138, 1361
HpyCH4IV	ACGT	3 cut(s)	389, 1865, 1940
HpyF10VI	GCNNNNNNNGC	6 cut(s)	251, 470, 579, 634, 1178, 1556
HpyF3I	CTNAG	7 cut(s)	272, 492, 528, 992, 1737, 1784, 1921
HpySE526I	ACGT	3 cut(s)	389, 1865, 1940
Hsp92I	GRCGYC	2 cut(s)	1483, 1940
Hsp92II	CATG	8 cut(s)	154, 166, 397, 613, 656, 1027, 1567, 1624
HspAI	GCGC	1 cut(s)	1559
Ksp22I	TGATCA	1 cut(s)	1353
Kzo9I	GATC	6 cut(s)	280, 402, 612, 1353, 1501, 1928
LguI	GCTCTTC	1 cut(s)	129
LmnI	GCTCC	1 cut(s)	1171
Lsp1109I	GCAGC	8 cut(s)	134, 395, 1193, 1324, 1359, 1375, 1622, 1798
LweI	GCATC	9 cut(s)	134, 232, 615, 955, 1060, 1375, 1483, 1520, 1741
MabI	ACCWGGT	1 cut(s)	561
MaeI	CTAG	5 cut(s)	117, 872, 1440, 1526, 1683
MaeII	ACGT	3 cut(s)	389, 1865, 1940
MaeIII	GTNAC	6 cut(s)	674, 703, 1123, 1756, 1936, 1941
MalI	GATC	6 cut(s)	282, 404, 614, 1355, 1503, 1930
MbiI	CCGCTC	1 cut(s)	950
MboI	GATC	6 cut(s)	280, 402, 612, 1353, 1501, 1928
MboII	GAAGA	9 cut(s)	146, 370, 1079, 1210, 1313, 1531, 1637, 1817, 1908
MflI	RGATCY	2 cut(s)	1501, 1928
MhlI	GDGCHC	6 cut(s)	475, 660, 718, 902, 1023, 1168
MlyI	GAGTC	2 cut(s)	285, 522
MmeI	TCCRAC	3 cut(s)	174, 397, 824
MslI	CAYNNNNRTG	1 cut(s)	392
MspA1I	CMGCKG	4 cut(s)	408, 491, 1337, 1965
MspCI	CTTAAG	1 cut(s)	865
MspR9I	CCNGG	2 cut(s)	563, 1189
Mva1269I	GAATGC	2 cut(s)	1638, 1732
MvaI	CCWGG	2 cut(s)	563, 1189
MvnI	CGCG	1 cut(s)	299
MwoI	GCNNNNNNNGC	6 cut(s)	251, 470, 579, 634, 1178, 1556
NdeII	GATC	6 cut(s)	280, 402, 612, 1353, 1501, 1928
NlaIII	CATG	8 cut(s)	154, 166, 397, 613, 656, 1027, 1567, 1624
NlaIV	GGNNCC	3 cut(s)	177, 237, 899
NmeAIII	GCCGAG	1 cut(s)	1814
NmuCI	GTSAC	3 cut(s)	1123, 1936, 1941
NspI	RCATGY	1 cut(s)	166
PagI	TCATGA	1 cut(s)	1023
PciI	ACATGT	1 cut(s)	162
PciSI	GCTCTTC	1 cut(s)	129
PcsI	WCGNNNNNNNCGW	1 cut(s)	1871
PctI	GAATGC	2 cut(s)	1638, 1732
PfeI	GAWTC	6 cut(s)	204, 380, 752, 1157, 1835, 1876
PflFI	GACNNNGTC	1 cut(s)	647
PflMI	CCANNNNNTGG	1 cut(s)	460
PkrI	GCNGC	8 cut(s)	124, 410, 1183, 1339, 1349, 1390, 1637, 1813
PleI	GAGTC	2 cut(s)	284, 521
PpsI	GAGTC	2 cut(s)	284, 521
Ppu21I	YACGTR	2 cut(s)	390, 1866
PpuMI	RGGWCCY	2 cut(s)	175, 236
PscI	ACATGT	1 cut(s)	162
PshBI	ATTAAT	1 cut(s)	75
PsiI	TTATAA	3 cut(s)	1131, 1554, 1764
Psp124BI	GAGCTC	2 cut(s)	660, 1168
Psp5II	RGGWCCY	2 cut(s)	175, 236
Psp6I	CCWGG	2 cut(s)	561, 1187
PspFI	CCCAGC	1 cut(s)	353
PspGI	CCWGG	2 cut(s)	561, 1187
PspN4I	GGNNCC	3 cut(s)	177, 237, 899
PspPI	GGNCC	4 cut(s)	175, 236, 649, 1694
PspPPI	RGGWCCY	2 cut(s)	175, 236
PstNI	CAGNNNCTG	1 cut(s)	128
PsuI	RGATCY	2 cut(s)	1501, 1928
PsyI	GACNNNGTC	1 cut(s)	647
PvuII	CAGCTG	3 cut(s)	491, 1337, 1965
RsaI	GTAC	3 cut(s)	392, 1382, 1868
RsaNI	GTAC	3 cut(s)	391, 1381, 1867
RseI	CAYNNNNRTG	1 cut(s)	392
SacI	GAGCTC	2 cut(s)	660, 1168
SapI	GCTCTTC	1 cut(s)	129
SatI	GCNGC	8 cut(s)	123, 409, 1182, 1338, 1348, 1389, 1636, 1812
Sau3AI	GATC	6 cut(s)	280, 402, 612, 1353, 1501, 1928
Sau96I	GGNCC	4 cut(s)	175, 236, 649, 1694
SchI	GAGTC	2 cut(s)	285, 522
ScrFI	CCNGG	2 cut(s)	563, 1189
SduI	GDGCHC	6 cut(s)	475, 660, 718, 902, 1023, 1168
SexAI	ACCWGGT	1 cut(s)	561
SfaNI	GCATC	9 cut(s)	134, 232, 615, 955, 1060, 1375, 1483, 1520, 1741
SinI	GGWCC	3 cut(s)	175, 236, 649
SmiMI	CAYNNNNRTG	1 cut(s)	392
SmlI	CTYRAG	3 cut(s)	305, 865, 1880
SmoI	CTYRAG	3 cut(s)	305, 865, 1880
SnaBI	TACGTA	1 cut(s)	1866
SsiI	CCGC	8 cut(s)	37, 299, 406, 726, 902, 950, 1378, 1754
SspMI	CTAG	5 cut(s)	117, 872, 1440, 1526, 1683
SstI	GAGCTC	2 cut(s)	660, 1168
StyD4I	CCNGG	2 cut(s)	561, 1187
TaaI	ACNGT	6 cut(s)	689, 703, 713, 910, 1138, 1361
TaiI	ACGT	3 cut(s)	392, 1868, 1943
TaqI	TCGA	3 cut(s)	279, 1299, 1874
TfiI	GAWTC	6 cut(s)	204, 380, 752, 1157, 1835, 1876
TscAI	CASTG	5 cut(s)	261, 718, 723, 928, 1141
TseFI	GTSAC	3 cut(s)	1123, 1936, 1941
TseI	GCWGC	8 cut(s)	122, 408, 1181, 1337, 1347, 1388, 1635, 1811
Tsp45I	GTSAC	3 cut(s)	1123, 1936, 1941
TspRI	CASTG	5 cut(s)	261, 718, 723, 928, 1141
Tth111I	GACNNNGTC	1 cut(s)	647
Van91I	CCANNNNNTGG	1 cut(s)	460
Vha464I	CTTAAG	1 cut(s)	865
VneI	GTGCAC	2 cut(s)	471, 714
VpaK11BI	GGWCC	3 cut(s)	175, 236, 649
VspI	ATTAAT	1 cut(s)	75
XagI	CCTNNNNNAGG	1 cut(s)	875
XapI	RAATTY	3 cut(s)	19, 222, 367
XceI	RCATGY	1 cut(s)	166
XmiI	GTMKAC	1 cut(s)	960
XspI	CTAG	5 cut(s)	117, 872, 1440, 1526, 1683
ZraI	GACGTC	1 cut(s)	1941

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.