pycom17g24160

DNA excision repair protein ERCC-6-like 2

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0013205
Physical Location & Seq
Reverse (-)
22431089 .. 22437623
6535 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2652 bp
ATGTCCCTCCAGTCCTTCAAAGAAGCCCTTAAACCCTGCAGAAACTCGTCATCCTTAACAACCCAATCACAATCCTCAATCTCCCAACCCGTAGAAGAACCTACAATCCCAAGACGTCCCCCCAAATCGTCTCTGTCTCAGCAGCTTCTGAGACTGCAAGACCCATTGTCTCTGCCGCCAATTCAAACCAAACAAATCCAGGACCAGAATGGTAGTGAGGATGAGGTTGATGAAGAAGAAGAAGACGACCCAGAACCAGTGGCCTGTGGGAGCCCTAAAGTGGGTTTCTTTGAGTTTGATCACACAGGACCATATGAGCCCTTGGTCTTGTCCTGTGAGGGAGAATTTCCGCTTGTACAGGTTCCTGCATCCGTTAACTGCAGGTTGCTTGAACATCAGAGAGAGGGAGTGAAGTTTCTTTATACTCTGTACAAGAACAATCATGGAGGTATTCTTGGTGACGACATGGGACTAGGAAAAACCATCCAAACAATTGCATTCTTGGCTGCTGTGTTTGGGAAAGATGGGGATTGCATTGACTCCACAGTACTGAAGAAATACCAAACAGCTGAAAGAGCCCCTGTTCTCATAGTTTGCCCTACTTCAGTTATCCACAATTGGGAGAATGAATTCTCTAAGTGGTCTAACTTTAGTGTTGCTGTTTACCATGGTGCAAATCGTGATTTGATTTATGATAAATTAGGATCACATGAAGTTGAGATACTTATCACAAGCTTTGACACTTACAGAATATGTGGCAGCCAGTTGTCAAAGGTGAATTGGGAGATCGTGATTGTTGATGAAGCACATCGGCTTAAAAATGAAAAATCAAAGCTCTATATAGCATGTTTAGAATTTAAAACCTTAAAGCGTATTGGTCTCACTGGAACCATAATGCAGAACAAAATCATGGAACTTTTTAATCTCTTTGACTGGGTTGCACCTGGATCCTTGGGAACACGTGAACATTTTCGCGAGTTTTATGATGAACCCCTCAAGCATGGCCAAAGGTCAACTGCCCCTGAAAGATTTGTTCGTGTTGCTGATAAGCGAAAACAACACCTAGCAGCAGTTCTTCATAAATATATGTTAAGAAGGACGAAAGAGGAAACTATTGGGCATCTTATGATGGGGAAGGAAGATAATGTCATATTCTGTGCTATGAGTGAATTGCAAAAACGGGTGTATAGGAGAATGTTACAGCTACCGGATATCCATTGCCTAATAAATAAGGACAACCCATGTAGTTGTGGAAGCCCTCTTACTCAAGCTGAGTGCTGTAAAAGGACTATGCCGCATGGAAAGCTTTGGCCATACTTTCACACGGATAACCCTGACGGTTGTGATTCATGCCCCTTCTGCATTGTCCTTCCTTGCCTTGTCAAGCTCCAACAGATAAGTAATCACTTGGAGCTGATTAAGCCTAATCCAAAGGATGACCCAGATAAGCAAAAGAAAGATGCAGAGTTTGCCACAGCTGTGTTTGGCGAAGATGCTGAATTGGTGGGAGGGAACACCCAGAATGAGAGTTTTATGGGCCTGAGTGATGTTAAACATTGTGGCAAAATGCGAGCACTTGAAAAGTTCTTGTTCTCATGGATTTCACGGGGTGACAAAGTTCTTTTGTTCAGTTACTCTGTCAGGATGCTGGACATACTGGAAAAGTTTCTCATACGCAAAGGCTATTGCTTCTCAAGACTTGATGGTTCAACACCAACCAACTTGCGTCAGTCTCTTGTTGATGACTTTAATTCAAGTCCTAGCAAACAGGTGTTCCTTATATCAACTCGAGCTGGTGGGCTTGGGTTGAATCTGGTCAGCGCAAATCGTGTGGTAATATTTGATCCAAGCTGGAACCCTGCCCAAGACTTACAGGCCCAGGACCGGTCATTTCGTTTCGGACAGAAGAGACATGTTGTGGTTTTCCGTTTTCTTTCTGCTGGTTCCCTTGATGAGCTTGTTTACTCACGTCAGGTGTACAAACAGCAGCTATCCAACATTGCTGTTTCTGGAAAAATGGAGAAAAGATATTTTGAAGGTGTCCAGGATTGCAAAGAATTTCAAGGGGAACTTTTCGGAATCTGCAATTTATTTCGTGACCTTTCAGATAAGCTCTTTACCAGTGAAATCTTCGAGTTGAATGAGAAGCAAACGCAAAAAGAATTGTATAGGACAAAACAAGAATCAACCAAAGTTGGTAGCGATCATGTTTCATTAAAAGAAGTGGATGTCGCCTCTTCATCAGTGTCTGAGGCCAGATCAACCAATGATTCTGAGAAGCGTTTAACAAGTCAACCTGTGCTCAAAGAAGTCGGTATTGTGTATGCACATCGTAATGAAGACATTGTGAATTATGGACCTGGAACTCAAGGGACGACAGAATTGACCATCCCTAATGGTAGCCTCGTGGACCCAGGCATTCATGTCTCGCGGAAGAAGAAACTAGATGGTATCGGTGGGAAGGAAAATTTTCCTTCACCCATGGATCAGAAAAGGATCCAGTACAGCCGCCTTTCTAAGTTCATGGGTTTGGGAGAGCTTGAATTTAGCAAGTGGGTAATATCTGCCACACCAATGGAGAGGGAGAGAGTGCTCGGGGACTTCAGGAAGAGAAAGAAGAAGACGATTGAAAACATTATTTTCGAAGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0016020
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Helicase_C SNF2_N

Protein Analysis

884

Amino Acids

100.17

Weight (kDa)

7.26

Isoelectric Point (pI)

43.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ResIII PF04851 128 - 298 2.6e-09 Type III restriction enzyme, res subunit
SNF2-rel_dom PF00176 132 - 407 7.2e-68 SNF2-related domain
DEAD PF00270 152 - 299 9.8e-07 DEAD/DEAH box helicase
Helicase_C PF00271 522 - 634 7e-24 Helicase conserved C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013205)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03750
fragaria_vesca FvH4_6g26480 FvH4_6g26480 FvH4_6g26480 FvH4_6g26480
malus_domestica MD17G1236900.v1.1
prunus_persica Prupe.3G139100_v2.0.a1
pyrus_communis pycom17g24160
rosa_chinensis RchiOBHm_Chr2g0127761
rosa_laevigata RLG00000018935
rosa_multiflora Rmu_sc0001829.1_g000008 Rmu_sc0004240.1_g000009
rosa_roxburghii Rroxscaffold_2G00116780
rosa_rugosa Rorug02G0271200
rosa_samantha Rh2AG323300 Rh2BG332500 Rh2CG311100
rosa_wichuraiana Rw2G026240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 118
Acc36I ACCTGC 1 cut(s) 372
AccII CGCG 2 cut(s) 975, 2431
AciI CCGC 5 cut(s) 176, 350, 1295, 2431, 2509
AclWI GGATC 7 cut(s) 712, 942, 955, 1838, 2491, 2493, 2504
AcoI YGGCCR 2 cut(s) 1003, 1310
AcsI RAATTY 6 cut(s) 344, 629, 854, 2057, 2467, 2543
AcuI CTGAAG 3 cut(s) 572, 588, 2587
AcvI CACGTG 1 cut(s) 962
AcyI GRCGYC 1 cut(s) 115
AdeI CACNNNGTG 1 cut(s) 1610
AfaI GTAC 5 cut(s) 357, 431, 549, 1979, 2504
AfiI CCNNNNNNNGG 4 cut(s) 280, 281, 619, 1884
AflIII ACRYGT 2 cut(s) 959, 1912
AgeI ACCGGT 1 cut(s) 1884
AhdI GACNNNNNGTC 1 cut(s) 166
AjiI CACGTC 1 cut(s) 1970
AjnI CCWGG 6 cut(s) 198, 943, 1878, 2043, 2359, 2413
AleI CACNNNNGTG 1 cut(s) 1478
AloI GAACNNNNNNTCC 2 cut(s) 90, 122
Alw21I GWGCWC 3 cut(s) 1576, 2304, 2595
Alw26I GTCTC 8 cut(s) 135, 141, 145, 174, 884, 1737, 1903, 2431
AlwI GGATC 7 cut(s) 712, 942, 955, 1838, 2491, 2493, 2504
AlwNI CAGNNNCTG 2 cut(s) 148, 2249
Ama87I CYCGRG 2 cut(s) 1788, 2594
AoxI GGCC 6 cut(s) 261, 1003, 1310, 1537, 1875, 2253
ApeKI GCWGC 5 cut(s) 142, 506, 759, 1067, 1987
ApoI RAATTY 6 cut(s) 344, 629, 854, 2057, 2467, 2543
AsiGI ACCGGT 1 cut(s) 1884
Asp700I GAANNNNTTC 4 cut(s) 629, 969, 1665, 2469
AspLEI GCGC 1 cut(s) 1823
AspS9I GGNCC 7 cut(s) 202, 308, 1537, 1876, 1882, 2357, 2410
AsuHPI GGTGA 4 cut(s) 470, 787, 1622, 2469
AsuII TTCGAA 1 cut(s) 2643
AvaI CYCGRG 2 cut(s) 1788, 2594
AvaII GGWCC 5 cut(s) 202, 308, 1882, 2357, 2410
BalI TGGCCA 2 cut(s) 1005, 1312
BamHI GGATCC 2 cut(s) 947, 2496
BanII GRGCYC 3 cut(s) 275, 321, 580
BarI GAAGNNNNNNTAC 4 cut(s) 705, 737, 1246, 1278
BauI CACGAG 1 cut(s) 2405
BbrPI CACGTG 1 cut(s) 962
BbsI GAAGAC 3 cut(s) 249, 2346, 2627
Bbv12I GWGCWC 3 cut(s) 1576, 2304, 2595
BbvI GCAGC 5 cut(s) 154, 493, 771, 1079, 1999
BccI CCATC 6 cut(s) 491, 518, 1123, 1697, 2396, 2441
BciT130I CCWGG 6 cut(s) 200, 945, 1880, 2045, 2361, 2415
BclI TGATCA 1 cut(s) 298
BcoDI GTCTC 8 cut(s) 135, 141, 145, 174, 884, 1737, 1903, 2431
BfaI CTAG 4 cut(s) 473, 1064, 1761, 2444
BfmI CTRYAG 2 cut(s) 37, 379
BfuAI ACCTGC 1 cut(s) 372
BisI GCNGC 8 cut(s) 143, 176, 507, 760, 1068, 1295, 1988, 2509
BlsI GCNGC 8 cut(s) 144, 177, 508, 761, 1069, 1296, 1989, 2510
BmcAI AGTACT 1 cut(s) 549
Bme1390I CCNGG 6 cut(s) 200, 945, 1880, 2045, 2361, 2415
Bme18I GGWCC 5 cut(s) 202, 308, 1882, 2357, 2410
BmeRI GACNNNNNGTC 1 cut(s) 166
BmeT110I CYCGRG 2 cut(s) 1788, 2594
BmgBI CACGTC 1 cut(s) 1970
BmgT120I GGNCC 7 cut(s) 202, 308, 1537, 1876, 1882, 2357, 2410
BmiI GGNNCC 8 cut(s) 272, 363, 889, 949, 1856, 1945, 2412, 2498
BmrFI CCNGG 6 cut(s) 200, 945, 1880, 2045, 2361, 2415
BmrI ACTGGG 1 cut(s) 943
BmsI GCATC 5 cut(s) 377, 1129, 1450, 1483, 1635
BmuI ACTGGG 1 cut(s) 943
BpiI GAAGAC 3 cut(s) 249, 2346, 2627
Bpu14I TTCGAA 1 cut(s) 2643
BpuEI CTTGAG 4 cut(s) 980, 1251, 1678, 2352
BsaAI YACGTR 1 cut(s) 962
BsaBI GATNNNNATC 1 cut(s) 725
BsaHI GRCGYC 1 cut(s) 115
BsaI GGTCTC 1 cut(s) 884
BsaJI CCNNGG 6 cut(s) 321, 667, 951, 1878, 2413, 2481
BsaWI WCCGGW 2 cut(s) 1207, 1884
Bsc4I CCNNNNNNNGG 4 cut(s) 280, 281, 619, 1884
Bse118I RCCGGY 1 cut(s) 1884
Bse1I ACTGG 8 cut(s) 10, 257, 763, 889, 938, 1662, 2121, 2500
Bse3DI GCAATG 2 cut(s) 1216, 1998
Bse8I GATNNNNATC 1 cut(s) 725
BseBI CCWGG 6 cut(s) 200, 945, 1880, 2045, 2361, 2415
BseDI CCNNGG 6 cut(s) 321, 667, 951, 1878, 2413, 2481
BseGI GGATG 8 cut(s) 50, 226, 368, 483, 1441, 1650, 2233, 2388
BseJI GATNNNNATC 1 cut(s) 725
BseLI CCNNNNNNNGG 4 cut(s) 280, 281, 619, 1884
BseMI GCAATG 2 cut(s) 1216, 1998
BseMII CTCAG 6 cut(s) 140, 152, 1263, 1532, 2241, 2265
BseNI ACTGG 8 cut(s) 10, 257, 763, 889, 938, 1662, 2121, 2500
BseXI GCAGC 5 cut(s) 154, 493, 771, 1079, 1999
Bsh1236I CGCG 2 cut(s) 975, 2431
BshFI GGCC 6 cut(s) 263, 1005, 1312, 1539, 1877, 2255
BshTI ACCGGT 1 cut(s) 1884
BsiHKAI GWGCWC 3 cut(s) 1576, 2304, 2595
BsiHKCI CYCGRG 2 cut(s) 1788, 2594
BsiSI CCGG 2 cut(s) 1208, 1885
BslFI GGGAC 4 cut(s) 102, 483, 2386, 2612
BslI CCNNNNNNNGG 4 cut(s) 280, 281, 619, 1884
BsmAI GTCTC 8 cut(s) 135, 141, 145, 174, 884, 1737, 1903, 2431
BsmBI CGTCTC 1 cut(s) 135
BsmFI GGGAC 4 cut(s) 102, 483, 2386, 2612
BsmI GAATGC 2 cut(s) 497, 2418
BsnI GGCC 6 cut(s) 263, 1005, 1312, 1539, 1877, 2255
Bso31I GGTCTC 1 cut(s) 884
BsoBI CYCGRG 2 cut(s) 1788, 2594
Bsp119I TTCGAA 1 cut(s) 2643
Bsp1286I GDGCHC 6 cut(s) 275, 321, 580, 1576, 2304, 2595
Bsp1407I TGTACA 3 cut(s) 355, 429, 1977
Bsp143I GATC 9 cut(s) 298, 704, 786, 947, 1843, 2203, 2258, 2485, 2496
Bsp19I CCATGG 2 cut(s) 667, 2481
Bsp68I TCGCGA 1 cut(s) 975
BspACI CCGC 5 cut(s) 176, 350, 1295, 2431, 2509
BspANI GGCC 6 cut(s) 263, 1005, 1312, 1539, 1877, 2255
BspCNI CTCAG 6 cut(s) 141, 151, 1264, 1533, 2242, 2266
BspFNI CGCG 2 cut(s) 975, 2431
BspLI GGNNCC 8 cut(s) 272, 363, 889, 949, 1856, 1945, 2412, 2498
BspMAI CTGCAG 2 cut(s) 41, 383
BspMI ACCTGC 1 cut(s) 372
BspPI GGATC 7 cut(s) 712, 942, 955, 1838, 2491, 2493, 2504
BspT104I TTCGAA 1 cut(s) 2643
BspTNI GGTCTC 1 cut(s) 884
BsrDI GCAATG 2 cut(s) 1216, 1998
BsrFI RCCGGY 1 cut(s) 1884
BsrGI TGTACA 3 cut(s) 355, 429, 1977
BsrI ACTGG 8 cut(s) 10, 257, 763, 889, 938, 1662, 2121, 2500
BssAI RCCGGY 1 cut(s) 1884
BssECI CCNNGG 6 cut(s) 321, 667, 951, 1878, 2413, 2481
BssMI GATC 9 cut(s) 298, 704, 786, 947, 1843, 2203, 2258, 2485, 2496
BssNI GRCGYC 1 cut(s) 115
BssSI CACGAG 1 cut(s) 2405
BssT1I CCWWGG 4 cut(s) 321, 667, 951, 2481
Bst2BI CACGAG 1 cut(s) 2405
Bst2UI CCWGG 6 cut(s) 200, 945, 1880, 2045, 2361, 2415
Bst4CI ACNGT 2 cut(s) 547, 1340
Bst6I CTCTTC 3 cut(s) 1901, 2242, 2603
BstACI GRCGYC 1 cut(s) 115
BstAPI GCANNNNNTGC 1 cut(s) 1469
BstAUI TGTACA 3 cut(s) 355, 429, 1977
BstBAI YACGTR 1 cut(s) 962
BstBI TTCGAA 1 cut(s) 2643
BstC8I GCNNGC 1 cut(s) 1572
BstDEI CTNAG 8 cut(s) 138, 149, 636, 1272, 1541, 2250, 2274, 2517
BstDSI CCRYGG 2 cut(s) 667, 2481
BstF5I GGATG 8 cut(s) 50, 226, 368, 483, 1441, 1650, 2233, 2388
BstFNI CGCG 2 cut(s) 975, 2431
BstHHI GCGC 1 cut(s) 1823
BstKTI GATC 9 cut(s) 301, 707, 789, 950, 1846, 2206, 2261, 2488, 2499
BstMAI GTCTC 8 cut(s) 135, 141, 145, 174, 884, 1737, 1903, 2431
BstMBI GATC 9 cut(s) 298, 704, 786, 947, 1843, 2203, 2258, 2485, 2496
BstMWI GCNNNNNNNGC 6 cut(s) 503, 575, 1303, 1359, 1420, 1469
BstNI CCWGG 6 cut(s) 200, 945, 1880, 2045, 2361, 2415
BstNSI RCATGY 2 cut(s) 849, 1916
BstSCI CCNGG 6 cut(s) 198, 943, 1878, 2043, 2359, 2413
BstSFI CTRYAG 2 cut(s) 37, 379
BstUI CGCG 2 cut(s) 975, 2431
BstV1I GCAGC 5 cut(s) 154, 493, 771, 1079, 1999
BstV2I GAAGAC 3 cut(s) 249, 2346, 2627
BstX2I RGATCY 2 cut(s) 947, 2496
BstXI CCANNNNNNTGG 1 cut(s) 2575
BstYI RGATCY 2 cut(s) 947, 2496
BsuRI GGCC 6 cut(s) 263, 1005, 1312, 1539, 1877, 2255
BtgI CCRYGG 2 cut(s) 667, 2481
BtrI CACGTC 1 cut(s) 1970
BtsCI GGATG 8 cut(s) 50, 226, 368, 483, 1441, 1650, 2233, 2388
BtsIMutI CAGTG 4 cut(s) 264, 882, 2128, 2250
BtuMI TCGCGA 1 cut(s) 975
BveI ACCTGC 1 cut(s) 372
Cac8I GCNNGC 1 cut(s) 1572
CaiI CAGNNNCTG 2 cut(s) 148, 2249
CfoI GCGC 1 cut(s) 1823
Cfr10I RCCGGY 1 cut(s) 1884
Cfr13I GGNCC 7 cut(s) 202, 308, 1537, 1876, 1882, 2357, 2410
CseI GACGC 1 cut(s) 1715
Csp6I GTAC 5 cut(s) 356, 430, 548, 1978, 2503
CspAI ACCGGT 1 cut(s) 1884
CspCI CAANNNNNGTGG 2 cut(s) 1812, 1847
CviQI GTAC 5 cut(s) 356, 430, 548, 1978, 2503
DdeI CTNAG 8 cut(s) 138, 149, 636, 1272, 1541, 2250, 2274, 2517
DpnI GATC 9 cut(s) 300, 706, 788, 949, 1845, 2205, 2260, 2487, 2498
DpnII GATC 9 cut(s) 298, 704, 786, 947, 1843, 2203, 2258, 2485, 2496
DraI TTTAAA 1 cut(s) 859
DraIII CACNNNGTG 1 cut(s) 1610
DriI GACNNNNNGTC 1 cut(s) 166
EaeI YGGCCR 2 cut(s) 1003, 1310
Eam1104I CTCTTC 3 cut(s) 1901, 2242, 2603
Eam1105I GACNNNNNGTC 1 cut(s) 166
EarI CTCTTC 3 cut(s) 1901, 2242, 2603
Eco130I CCWWGG 4 cut(s) 321, 667, 951, 2481
Eco24I GRGCYC 3 cut(s) 275, 321, 580
Eco31I GGTCTC 1 cut(s) 884
Eco32I GATATC 1 cut(s) 1213
Eco47I GGWCC 5 cut(s) 202, 308, 1882, 2357, 2410
Eco57I CTGAAG 3 cut(s) 572, 588, 2587
Eco72I CACGTG 1 cut(s) 962
Eco88I CYCGRG 2 cut(s) 1788, 2594
EcoRI GAATTC 1 cut(s) 629
EcoRII CCWGG 6 cut(s) 198, 943, 1878, 2043, 2359, 2413
EcoRV GATATC 1 cut(s) 1213
EcoT14I CCWWGG 4 cut(s) 321, 667, 951, 2481
EcoT38I GRGCYC 3 cut(s) 275, 321, 580
ErhI CCWWGG 4 cut(s) 321, 667, 951, 2481
Esp3I CGTCTC 1 cut(s) 135
FalI AAGNNNNNCTT 4 cut(s) 12, 44, 2055, 2087
FaqI GGGAC 4 cut(s) 102, 483, 2386, 2612
FauNDI CATATG 1 cut(s) 313
FbaI TGATCA 1 cut(s) 298
Fnu4HI GCNGC 8 cut(s) 143, 176, 507, 760, 1068, 1295, 1988, 2509
FokI GGATG 8 cut(s) 37, 233, 355, 470, 1448, 1657, 2240, 2375
FriOI GRGCYC 3 cut(s) 275, 321, 580
Fsp4HI GCNGC 8 cut(s) 143, 176, 507, 760, 1068, 1295, 1988, 2509
FspBI CTAG 4 cut(s) 473, 1064, 1761, 2444
GlaI GCGC 1 cut(s) 1822
GluI GCNGC 8 cut(s) 143, 176, 507, 760, 1068, 1295, 1988, 2509
HaeIII GGCC 6 cut(s) 263, 1005, 1312, 1539, 1877, 2255
HapII CCGG 2 cut(s) 1208, 1885
HgaI GACGC 1 cut(s) 1715
HhaI GCGC 1 cut(s) 1823
Hin1I GRCGYC 1 cut(s) 115
Hin6I GCGC 1 cut(s) 1821
HinP1I GCGC 1 cut(s) 1821
HincII GTYRAC 3 cut(s) 376, 1014, 2294
HindII GTYRAC 3 cut(s) 376, 1014, 2294
HindIII AAGCTT 2 cut(s) 733, 1304
HinfI GANTC 6 cut(s) 539, 1346, 1810, 2079, 2183, 2270
HpaI GTTAAC 1 cut(s) 376
HpaII CCGG 2 cut(s) 1208, 1885
HphI GGTGA 4 cut(s) 470, 787, 1622, 2469
Hpy166II GTNNAC 8 cut(s) 376, 664, 965, 1014, 1963, 1978, 2294, 2410
Hpy188I TCNGA 8 cut(s) 150, 399, 1901, 2078, 2107, 2251, 2275, 2490
Hpy188III TCNNGA 8 cut(s) 680, 790, 974, 1642, 1695, 2010, 2096, 2605
Hpy8I GTNNAC 8 cut(s) 376, 664, 965, 1014, 1963, 1978, 2294, 2410
HpyAV CCTTC 8 cut(s) 25, 1089, 1129, 1366, 1379, 2030, 2455, 2484
HpyCH4III ACNGT 2 cut(s) 547, 1340
HpyCH4IV ACGT 3 cut(s) 115, 961, 1969
HpyF10VI GCNNNNNNNGC 6 cut(s) 503, 575, 1303, 1359, 1420, 1469
HpyF3I CTNAG 8 cut(s) 138, 149, 636, 1272, 1541, 2250, 2274, 2517
HpySE526I ACGT 3 cut(s) 115, 961, 1969
Hsp92I GRCGYC 1 cut(s) 115
HspAI GCGC 1 cut(s) 1821
Ksp22I TGATCA 1 cut(s) 298
KspAI GTTAAC 1 cut(s) 376
Kzo9I GATC 9 cut(s) 298, 704, 786, 947, 1843, 2203, 2258, 2485, 2496
LmnI GCTCC 3 cut(s) 270, 1392, 1411
Lsp1109I GCAGC 5 cut(s) 154, 493, 771, 1079, 1999
LweI GCATC 5 cut(s) 377, 1129, 1450, 1483, 1635
MaeI CTAG 4 cut(s) 473, 1064, 1761, 2444
MaeII ACGT 3 cut(s) 115, 961, 1969
MaeIII GTNAC 5 cut(s) 458, 1197, 1610, 1631, 2096
MalI GATC 9 cut(s) 300, 706, 788, 949, 1845, 2205, 2260, 2487, 2498
MboI GATC 9 cut(s) 298, 704, 786, 947, 1843, 2203, 2258, 2485, 2496
MfeI CAATTG 2 cut(s) 492, 616
MflI RGATCY 2 cut(s) 947, 2496
MhlI GDGCHC 6 cut(s) 275, 321, 580, 1576, 2304, 2595
MlsI TGGCCA 2 cut(s) 1005, 1312
MluNI TGGCCA 2 cut(s) 1005, 1312
MlyI GAGTC 1 cut(s) 533
MmeI TCCRAC 2 cut(s) 1414, 2019
Mox20I TGGCCA 2 cut(s) 1005, 1312
MroXI GAANNNNTTC 4 cut(s) 629, 969, 1665, 2469
MscI TGGCCA 2 cut(s) 1005, 1312
MslI CAYNNNNRTG 3 cut(s) 1478, 2334, 2573
Msp20I TGGCCA 2 cut(s) 1005, 1312
MspA1I CMGCKG 2 cut(s) 569, 1478
MspI CCGG 2 cut(s) 1208, 1885
MspR9I CCNGG 6 cut(s) 200, 945, 1880, 2045, 2361, 2415
MunI CAATTG 2 cut(s) 492, 616
Mva1269I GAATGC 2 cut(s) 497, 2418
MvaI CCWGG 6 cut(s) 200, 945, 1880, 2045, 2361, 2415
MvnI CGCG 2 cut(s) 975, 2431
MwoI GCNNNNNNNGC 6 cut(s) 503, 575, 1303, 1359, 1420, 1469
NcoI CCATGG 2 cut(s) 667, 2481
NdeI CATATG 1 cut(s) 313
NdeII GATC 9 cut(s) 298, 704, 786, 947, 1843, 2203, 2258, 2485, 2496
NlaIV GGNNCC 8 cut(s) 272, 363, 889, 949, 1856, 1945, 2412, 2498
NmuCI GTSAC 3 cut(s) 458, 1610, 2096
NruI TCGCGA 1 cut(s) 975
NspI RCATGY 2 cut(s) 849, 1916
NspV TTCGAA 1 cut(s) 2643
OliI CACNNNNGTG 1 cut(s) 1478
PaeR7I CTCGAG 1 cut(s) 1788
PciI ACATGT 1 cut(s) 1912
PctI GAATGC 2 cut(s) 497, 2418
PdmI GAANNNNTTC 4 cut(s) 629, 969, 1665, 2469
PfeI GAWTC 5 cut(s) 1346, 1810, 2079, 2183, 2270
PfoI TCCNGGA 2 cut(s) 198, 2043
PinAI ACCGGT 1 cut(s) 1884
PkrI GCNGC 8 cut(s) 144, 177, 508, 761, 1069, 1296, 1989, 2510
PleI GAGTC 1 cut(s) 533
PmaCI CACGTG 1 cut(s) 962
PmlI CACGTG 1 cut(s) 962
PpsI GAGTC 1 cut(s) 533
Ppu21I YACGTR 1 cut(s) 962
PscI ACATGT 1 cut(s) 1912
Psp6I CCWGG 6 cut(s) 198, 943, 1878, 2043, 2359, 2413
PspCI CACGTG 1 cut(s) 962
PspGI CCWGG 6 cut(s) 198, 943, 1878, 2043, 2359, 2413
PspN4I GGNNCC 8 cut(s) 272, 363, 889, 949, 1856, 1945, 2412, 2498
PspPI GGNCC 7 cut(s) 202, 308, 1537, 1876, 1882, 2357, 2410
PspXI VCTCGAGB 1 cut(s) 1788
PstI CTGCAG 2 cut(s) 41, 383
PstNI CAGNNNCTG 2 cut(s) 148, 2249
PsuI RGATCY 2 cut(s) 947, 2496
PvuII CAGCTG 2 cut(s) 569, 1478
RruI TCGCGA 1 cut(s) 975
RsaI GTAC 5 cut(s) 357, 431, 549, 1979, 2504
RsaNI GTAC 5 cut(s) 356, 430, 548, 1978, 2503
RseI CAYNNNNRTG 3 cut(s) 1478, 2334, 2573
SatI GCNGC 8 cut(s) 143, 176, 507, 760, 1068, 1295, 1988, 2509
Sau3AI GATC 9 cut(s) 298, 704, 786, 947, 1843, 2203, 2258, 2485, 2496
Sau96I GGNCC 7 cut(s) 202, 308, 1537, 1876, 1882, 2357, 2410
ScaI AGTACT 1 cut(s) 549
SchI GAGTC 1 cut(s) 533
ScrFI CCNGG 6 cut(s) 200, 945, 1880, 2045, 2361, 2415
SduI GDGCHC 6 cut(s) 275, 321, 580, 1576, 2304, 2595
SfaNI GCATC 5 cut(s) 377, 1129, 1450, 1483, 1635
SfcI CTRYAG 2 cut(s) 37, 379
Sfr274I CTCGAG 1 cut(s) 1788
SfuI TTCGAA 1 cut(s) 2643
SinI GGWCC 5 cut(s) 202, 308, 1882, 2357, 2410
SlaI CTCGAG 1 cut(s) 1788
SmiMI CAYNNNNRTG 3 cut(s) 1478, 2334, 2573
SmlI CTYRAG 5 cut(s) 995, 1266, 1693, 1788, 2367
SmoI CTYRAG 5 cut(s) 995, 1266, 1693, 1788, 2367
SsiI CCGC 5 cut(s) 176, 350, 1295, 2431, 2509
SspI AATATT 1 cut(s) 1839
SspMI CTAG 4 cut(s) 473, 1064, 1761, 2444
StyD4I CCNGG 6 cut(s) 198, 943, 1878, 2043, 2359, 2413
StyI CCWWGG 4 cut(s) 321, 667, 951, 2481
TaaI ACNGT 2 cut(s) 547, 1340
TaiI ACGT 3 cut(s) 118, 964, 1972
TaqI TCGA 3 cut(s) 1789, 2133, 2643
TatI WGTACW 5 cut(s) 355, 429, 547, 1977, 2502
TauI GCSGC 3 cut(s) 178, 1297, 2511
TfiI GAWTC 5 cut(s) 1346, 1810, 2079, 2183, 2270
TscAI CASTG 4 cut(s) 264, 889, 2128, 2250
TseFI GTSAC 3 cut(s) 458, 1610, 2096
TseI GCWGC 5 cut(s) 142, 506, 759, 1067, 1987
Tsp45I GTSAC 3 cut(s) 458, 1610, 2096
TspGWI ACGGA 3 cut(s) 361, 1340, 1916
TspRI CASTG 4 cut(s) 264, 889, 2128, 2250
VpaK11BI GGWCC 5 cut(s) 202, 308, 1882, 2357, 2410
XapI RAATTY 6 cut(s) 344, 629, 854, 2057, 2467, 2543
XceI RCATGY 2 cut(s) 849, 1916
XcmI CCANNNNNNNNNTGG 1 cut(s) 206
XhoI CTCGAG 1 cut(s) 1788
XmnI GAANNNNTTC 4 cut(s) 629, 969, 1665, 2469
XspI CTAG 4 cut(s) 473, 1064, 1761, 2444
ZraI GACGTC 1 cut(s) 116
ZrmI AGTACT 1 cut(s) 549
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.