Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0005588

Physical Location & Seq

Genomic Coordinates Forward (+)

24671787 .. 24674893

Gene Structure 3107 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2127 bp

ATGTGTTTGATGTGCATTTCCTCAATGGGATTTTTTGCTGCTATGGCAGCATCATCAGCATGCCTTGTGGGGAATGGGTTATCTACCCGCAGTACTAAGACAAATTTGAGCAAGGACTTTTGTGGCAGGCATCTCTTGCACCCTTCAGCTCTTCCATCATTGGGTAAAGTGACAAAAACAGTTCTCACAAAGGCGTCACTAGACCAAAGGCAAAACGAGGGAAGAAGAGGCTTTCTGAAGTTGTTGCTTGGGAATGTGGGAATAGGAGCACCAGCTTTACTTGGAGCGGGGAATGCTTTGGCCGCCGATGATCAAGGTGTCTCTTCTTCAAGGATGTCTTATTCCAGGTTCTTGGAGTATCTGGACAAGGGCAGGGTAACTAAAGTTGATTTGTTTGAGAATGGAACCATAGCTATTGTTGAGGCTGTTTCTCCTGAGTTAGGGAACCGATTGCAGCGAGTTCGTGTTCAACTTCCGGGACTAAGCCAAGAGCTCCTCCAGAAGTTCAGGGAAAAGAACATCGACTTTGCAGCACATAATGCTCAAGAAGACTCAGGCTCTCTTTTATTTAATCTGATCGGAAATCACGCTTTCCCACTAATTTTAATGGGGGGCTTGTTCCTACTCTCAAGGCGTTCATCAGGAGGCATGGGGGGTCCAGGTGGGCCTGGATTTCCTTTACAATTTGGTCAATCTAAAGCCAAGTTCCAAATGGAACCAAACACCGGAGTGACATTCGATGATGTTGCTGGGGTAGATGAAGCCAAGCAAGATTTCGTGGAGGTGGTTGAATTCTTAAAGAAGCCTGAGAGGTTCACAGCTGTTGGGGCTCGAATTCCTAAAGGGGTTCTTCTTGTTGGCCCTCCTGGAACTGGAAAGACTCTACTAGCAAAGGCAATTGCTGGTGAAGCTGGTGTTCCATTTTTCTCCATCTCAGGTTCTGAGTTTGTTGAAATGTTTGTTGGTGTTGGTGCTTCTCGAGTTCGTGATCTTTTTAAGAAGGCTAAGGAGAATGCACCTTGCATTGTTTTTGTTGATGAAATTGACGCTGTTGGACGGCAAAGAGGAACTGGAATTGGTGGAGGGAATGATGAAAGGGAACAAACCCTTAATCAGCTTTTGACAGAAATGGATGGTTTTGAGGGCAACACTGGTATCATCGTGGTTGCAGCAACTAACAGGGCAGATATTCTTGACTCTGCCTTATTGAGGCCTGGCCGGTTTGACAGGCAGGTGTCTGTTGATGTCCCAGACATACGAGGAAGAACAGAGATCTTAAAGGTTCATGCTAGCAATAAGAAGTTTGATGGAACTGTTTCTCTTGATGTTGTAGCCATGAGGACACCTGGCTTCAGTGGGGCAGATCTTGCAAACCTCCTTAATGAAGCAGCTATATTGGCTGGTCGACGTGGGAAGTCAGCAATTTCATCTAAGGAGATTGATGATTCAATTGATAGAATAGTGGCTGGAATGGAAGGAACAGTAATGACAGATGGAAAGAGTAAAAGTCTGGTGGCATATCATGAAGTTGGACACGCCATCTGTGGGACATTGACTCCAGGGCATGATGCTGTCCAAAAGGTGACATTAGTCCCTCGTGGTCAGGCTCGGGGTCTTACATGGTTTATTCCTGCAGATGATCCTTCCTTGATCTCCAAGCAGCAACTATTTGCAAGAATTGTTGGCGGGCTTGGTGGTAGAGCTGCAGAGGAAGTGATCTTTGGTGAGCCTGAGGTGACAACAGGTGCAGCTGGTGATTTGCAGCAGATCACTGGTTTGGCCAAACAGATGGTTACCACCTTCGGAATGTCTGATATTGGACCGTGGTCATTGATGGACGCGTCTCAGAGCGGTGACGTCATTATGAGAATGATGGCAAGGAACTCAATGTCAGAAAAGCTTGCTGAAGACATTGATTTAGCTATTAAGAGATTATCGGATGAAGCATATGAGATTGCGTTGACCCACATAAGAAACAACCGCGAAGCCATTGACAAGATCGTGGAGGTCCTTCTTGAGAAGGAAACAATGACCGGAGATGAATTCCGGGCAATCTTGTCCGAATTCGTTGAAATCCCAGTTGAAAACCGGATCCCTGCTGCAGTTCCATCACCAGTGGCTGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006091 GO:0006508 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009056 GO:0009057 GO:0009314 GO:0009416 GO:0009507 GO:0009526 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009628 GO:0009642 GO:0009644 GO:0009657 GO:0009658 GO:0009668 GO:0009719 GO:0009725 GO:0009735 GO:0009765 GO:0009892 GO:0009941 GO:0009987 GO:0010027 GO:0010033 GO:0010109 GO:0010205 GO:0010206 GO:0010304 GO:0015979 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019222 GO:0019538 GO:0019684 GO:0022607 GO:0030091 GO:0030163 GO:0031323 GO:0031324 GO:0031967 GO:0031975 GO:0031976 GO:0031977 GO:0031984 GO:0034357 GO:0034622 GO:0042221 GO:0042548 GO:0042623 GO:0042651 GO:0043155 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043467 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0048519 GO:0048523 GO:0048564 GO:0050789 GO:0050794 GO:0050896 GO:0055035 GO:0061024 GO:0065003 GO:0065007 GO:0070011 GO:0071704 GO:0071840 GO:0072593 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1905156

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA FtsH_ext Peptidase_M41

Protein Analysis

709

Amino Acids

75.56

Weight (kDa)

5.89

Isoelectric Point (pI)

32.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FtsH_ext	PF06480	103 - 178	2.3e-07	FtsH Extracellular
AAA	PF00004	283 - 415	4.2e-46	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	439 - 481	3.3e-12	AAA+ lid domain
Peptidase_M41	PF01434	497 - 685	5.3e-67	Peptidase family M41

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005588)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06430 AT1G06430 AT1G06430 AT2G30950 AT2G30950 AT2G30950 AT2G30950
fragaria_vesca	FvH4_6g27780 FvH4_6g27780 FvH4_6g27780
malus_domestica	MD09G1234500.v1.1 MD17G1263600.v1.1
prunus_persica	Prupe.3G112700_v2.0.a1 Prupe.3G112700_v2.0.a1
pyrus_communis	pycom09g15280 pycom17g26380
rosa_chinensis	RchiOBHm_Chr2g0131061
rosa_roxburghii	Rroxscaffold_2G00113260
rosa_samantha	Rh2AG347000 Rh2AG479700 Rh2BG354500 Rh2BG461700 Rh2CG333000 Rh2DG372500 Rh2DG470900
rosa_wichuraiana	Rw2G028140 Rw2G028180 Rw4G004930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1222
AatII	GACGTC	1 cut(s)	1860
Acc36I	ACCTGC	1 cut(s)	1222
AccBSI	CCGCTC	2 cut(s)	287, 1851
AccI	GTMKAC	1 cut(s)	1405
AccII	CGCG	2 cut(s)	1841, 1983
AciI	CCGC	6 cut(s)	88, 287, 303, 1686, 1851, 1981
AclWI	GGATC	3 cut(s)	1634, 2086, 2099
AcoI	YGGCCR	3 cut(s)	300, 1216, 1779
AcsI	RAATTY	5 cut(s)	103, 791, 834, 2042, 2063
AcuI	CTGAAG	4 cut(s)	129, 257, 1336, 1926
AcyI	GRCGYC	2 cut(s)	194, 1857
AfaI	GTAC	1 cut(s)	94
AfiI	CCNNNNNNNGG	6 cut(s)	161, 440, 725, 872, 1209, 1545
AflIII	ACRYGT	1 cut(s)	1839
AgsI	TTSAA	7 cut(s)	330, 470, 791, 953, 1449, 2072, 2084
AjiI	CACGTC	1 cut(s)	1409
AjnI	CCWGG	7 cut(s)	344, 658, 667, 865, 1213, 1345, 1558
AjuI	GAANNNNNNNTTGG	6 cut(s)	758, 790, 945, 977, 1704, 1736
AleI	CACNNNNGTG	1 cut(s)	728
Alw21I	GWGCWC	2 cut(s)	271, 495
Alw26I	GTCTC	2 cut(s)	325, 1848
AlwI	GGATC	3 cut(s)	1634, 2086, 2099
AlwNI	CAGNNNCTG	2 cut(s)	941, 2120
Ama87I	CYCGRG	2 cut(s)	978, 1608
AoxI	GGCC	6 cut(s)	300, 665, 859, 1211, 1216, 1779
ApoI	RAATTY	5 cut(s)	103, 791, 834, 2042, 2063
Asp700I	GAANNNNTTC	1 cut(s)	1315
AspS9I	GGNCC	5 cut(s)	656, 665, 860, 1820, 2008
AsuC2I	CCSGG	2 cut(s)	477, 2048
AsuHPI	GGTGA	7 cut(s)	917, 1594, 1736, 1747, 1766, 1865, 2103
AsuNHI	GCTAGC	1 cut(s)	1289
AvaI	CYCGRG	2 cut(s)	978, 1608
AvaII	GGWCC	3 cut(s)	656, 1820, 2008
AxyI	CCTNAGG	1 cut(s)	1731
BaeI	ACNNNNGTAYC	2 cut(s)	1138, 1171
BalI	TGGCCA	1 cut(s)	1781
BamHI	GGATCC	1 cut(s)	2091
BanII	GRGCYC	2 cut(s)	495, 832
BauI	CACGAG	1 cut(s)	1596
BbsI	GAAGAC	2 cut(s)	555, 1914
Bbv12I	GWGCWC	2 cut(s)	271, 495
BceAI	ACGGC	1 cut(s)	1073
BcgI	CGANNNNNNTGC	4 cut(s)	443, 477, 728, 762
BciT130I	CCWGG	7 cut(s)	346, 660, 669, 867, 1215, 1347, 1560
BclI	TGATCA	1 cut(s)	310
BcnI	CCSGG	2 cut(s)	477, 2048
BcoDI	GTCTC	2 cut(s)	325, 1848
BfaI	CTAG	3 cut(s)	200, 887, 1290
BfmI	CTRYAG	3 cut(s)	1632, 1704, 2100
BfuAI	ACCTGC	1 cut(s)	1222
BglII	AGATCT	2 cut(s)	1272, 1363
BmcAI	AGTACT	1 cut(s)	94
Bme1390I	CCNGG	9 cut(s)	346, 477, 660, 669, 867, 1215, 1347, 1560, 2048
Bme18I	GGWCC	3 cut(s)	656, 1820, 2008
BmeT110I	CYCGRG	2 cut(s)	978, 1608
BmgBI	CACGTC	1 cut(s)	1409
BmgT120I	GGNCC	5 cut(s)	656, 665, 860, 1820, 2008
BmiI	GGNNCC	5 cut(s)	406, 446, 657, 717, 2093
BmrFI	CCNGG	9 cut(s)	346, 477, 660, 669, 867, 1215, 1347, 1560, 2048
BmrI	ACTGGG	1 cut(s)	2072
BmsI	GCATC	3 cut(s)	59, 139, 1558
BmtI	GCTAGC	1 cut(s)	1293
BmuI	ACTGGG	1 cut(s)	2072
BoxI	GACNNNNGTC	2 cut(s)	1589, 1825
BpiI	GAAGAC	2 cut(s)	555, 1914
BpmI	CTGGAG	2 cut(s)	482, 1542
Bpu10I	CCTNAGC	1 cut(s)	1005
BpuEI	CTTGAG	3 cut(s)	528, 613, 2036
BpuMI	CCSGG	2 cut(s)	477, 2048
BsaHI	GRCGYC	2 cut(s)	194, 1857
BsaJI	CCNNGG	2 cut(s)	1559, 1823
BsaWI	WCCGGW	3 cut(s)	725, 2033, 2088
BsaXI	ACNNNNNCTCC	2 cut(s)	1540, 1570
Bsc4I	CCNNNNNNNGG	6 cut(s)	161, 440, 725, 872, 1209, 1545
Bse118I	RCCGGY	1 cut(s)	1218
Bse1I	ACTGG	6 cut(s)	877, 1075, 1156, 1777, 2078, 2114
Bse21I	CCTNAGG	1 cut(s)	1731
BseBI	CCWGG	7 cut(s)	346, 660, 669, 867, 1215, 1347, 1560
BseDI	CCNNGG	2 cut(s)	1559, 1823
BseGI	GGATG	3 cut(s)	339, 1138, 1945
BseLI	CCNNNNNNNGG	6 cut(s)	161, 440, 725, 872, 1209, 1545
BseMII	CTCAG	7 cut(s)	426, 567, 798, 933, 948, 1722, 1859
BseNI	ACTGG	6 cut(s)	877, 1075, 1156, 1777, 2078, 2114
BseRI	GAGGAG	1 cut(s)	485
BseYI	CCCAGC	1 cut(s)	749
BsgI	GTGCAG	1 cut(s)	1767
Bsh1236I	CGCG	2 cut(s)	1841, 1983
BshFI	GGCC	6 cut(s)	302, 667, 861, 1213, 1218, 1781
BsiHKAI	GWGCWC	2 cut(s)	271, 495
BsiHKCI	CYCGRG	2 cut(s)	978, 1608
BsiSI	CCGG	6 cut(s)	476, 726, 1219, 2034, 2047, 2089
BslFI	GGGAC	4 cut(s)	492, 1232, 1561, 1577
BslI	CCNNNNNNNGG	6 cut(s)	161, 440, 725, 872, 1209, 1545
BsmAI	GTCTC	2 cut(s)	325, 1848
BsmBI	CGTCTC	1 cut(s)	1848
BsmFI	GGGAC	4 cut(s)	492, 1232, 1561, 1577
BsmI	GAATGC	2 cut(s)	298, 1018
BsnI	GGCC	6 cut(s)	302, 667, 861, 1213, 1218, 1781
BsoBI	CYCGRG	2 cut(s)	978, 1608
Bsp1286I	GDGCHC	3 cut(s)	271, 495, 832
BspACI	CCGC	6 cut(s)	88, 287, 303, 1686, 1851, 1981
BspANI	GGCC	6 cut(s)	302, 667, 861, 1213, 1218, 1781
BspCNI	CTCAG	7 cut(s)	427, 566, 799, 934, 947, 1723, 1858
BspFNI	CGCG	2 cut(s)	1841, 1983
BspHI	TCATGA	1 cut(s)	1522
BspLI	GGNNCC	5 cut(s)	406, 446, 657, 717, 2093
BspMAI	CTGCAG	3 cut(s)	1636, 1708, 2104
BspMI	ACCTGC	1 cut(s)	1222
BspOI	GCTAGC	1 cut(s)	1293
BspPI	GGATC	3 cut(s)	1634, 2086, 2099
BspQI	GCTCTTC	1 cut(s)	156
BsrBI	CCGCTC	2 cut(s)	287, 1851
BsrFI	RCCGGY	1 cut(s)	1218
BsrI	ACTGG	6 cut(s)	877, 1075, 1156, 1777, 2078, 2114
BssAI	RCCGGY	1 cut(s)	1218
BssECI	CCNNGG	2 cut(s)	1559, 1823
BssNI	GRCGYC	2 cut(s)	194, 1857
BssSI	CACGAG	1 cut(s)	1596
Bst2BI	CACGAG	1 cut(s)	1596
Bst2UI	CCWGG	7 cut(s)	346, 660, 669, 867, 1215, 1347, 1560
Bst4CI	ACNGT	4 cut(s)	181, 1315, 1483, 1824
Bst6I	CTCTTC	3 cut(s)	156, 220, 328
BstACI	GRCGYC	2 cut(s)	194, 1857
BstAPI	GCANNNNNTGC	3 cut(s)	136, 539, 1367
BstC8I	GCNNGC	5 cut(s)	61, 128, 1291, 1688, 1902
BstDSI	CCRYGG	1 cut(s)	1823
BstEII	GGTNACC	1 cut(s)	1792
BstENI	CCTNNNNNAGG	2 cut(s)	438, 1207
BstF5I	GGATG	3 cut(s)	339, 1138, 1945
BstFNI	CGCG	2 cut(s)	1841, 1983
BstMAI	GTCTC	2 cut(s)	325, 1848
BstNI	CCWGG	7 cut(s)	346, 660, 669, 867, 1215, 1347, 1560
BstNSI	RCATGY	1 cut(s)	63
BstPAI	GACNNNNGTC	2 cut(s)	1589, 1825
BstPI	GGTNACC	1 cut(s)	1792
BstSCI	CCNGG	9 cut(s)	344, 475, 658, 667, 865, 1213, 1345, 1558, 2046
BstSFI	CTRYAG	3 cut(s)	1632, 1704, 2100
BstUI	CGCG	2 cut(s)	1841, 1983
BstV2I	GAAGAC	2 cut(s)	555, 1914
BstX2I	RGATCY	3 cut(s)	1272, 1363, 2091
BstXI	CCANNNNNNTGG	2 cut(s)	352, 1789
BstYI	RGATCY	3 cut(s)	1272, 1363, 2091
Bsu36I	CCTNAGG	1 cut(s)	1731
BsuRI	GGCC	6 cut(s)	302, 667, 861, 1213, 1218, 1781
BtgI	CCRYGG	1 cut(s)	1823
BtrI	CACGTC	1 cut(s)	1409
BtsCI	GGATG	3 cut(s)	339, 1138, 1945
BtsIMutI	CAGTG	4 cut(s)	1149, 1360, 1770, 2121
BveI	ACCTGC	1 cut(s)	1222
Cac8I	GCNNGC	5 cut(s)	61, 128, 1291, 1688, 1902
CaiI	CAGNNNCTG	2 cut(s)	941, 2120
CciI	TCATGA	1 cut(s)	1522
Cfr10I	RCCGGY	1 cut(s)	1218
Cfr13I	GGNCC	5 cut(s)	656, 665, 860, 1820, 2008
CseI	GACGC	4 cut(s)	183, 1055, 1830, 1847
Csp6I	GTAC	1 cut(s)	93
CviAII	CATG	7 cut(s)	60, 649, 1286, 1336, 1523, 1565, 1620
CviQI	GTAC	1 cut(s)	93
EaeI	YGGCCR	3 cut(s)	300, 1216, 1779
Eam1104I	CTCTTC	3 cut(s)	156, 220, 328
EarI	CTCTTC	3 cut(s)	156, 220, 328
Ecl136II	GAGCTC	1 cut(s)	493
Eco147I	AGGCCT	1 cut(s)	1213
Eco24I	GRGCYC	2 cut(s)	495, 832
Eco47I	GGWCC	3 cut(s)	656, 1820, 2008
Eco53kI	GAGCTC	1 cut(s)	493
Eco57I	CTGAAG	4 cut(s)	129, 257, 1336, 1926
Eco81I	CCTNAGG	1 cut(s)	1731
Eco88I	CYCGRG	2 cut(s)	978, 1608
Eco91I	GGTNACC	1 cut(s)	1792
EcoICRI	GAGCTC	1 cut(s)	493
EcoNI	CCTNNNNNAGG	2 cut(s)	438, 1207
EcoO109I	RGGNCCY	1 cut(s)	2008
EcoO65I	GGTNACC	1 cut(s)	1792
EcoRI	GAATTC	4 cut(s)	791, 834, 2042, 2063
EcoRII	CCWGG	7 cut(s)	344, 658, 667, 865, 1213, 1345, 1558
EcoT38I	GRGCYC	2 cut(s)	495, 832
Esp3I	CGTCTC	1 cut(s)	1848
FaeI	CATG	7 cut(s)	63, 652, 1289, 1339, 1526, 1568, 1623
FalI	AAGNNNNNCTT	4 cut(s)	322, 354, 834, 866
FaqI	GGGAC	4 cut(s)	492, 1232, 1561, 1577
FatI	CATG	7 cut(s)	59, 648, 1285, 1335, 1522, 1564, 1619
FauI	CCCGC	3 cut(s)	95, 280, 1679
FauNDI	CATATG	1 cut(s)	1948
FbaI	TGATCA	1 cut(s)	310
FblI	GTMKAC	1 cut(s)	1405
FokI	GGATG	3 cut(s)	346, 1145, 1952
FriOI	GRGCYC	2 cut(s)	495, 832
FspBI	CTAG	3 cut(s)	200, 887, 1290
GsaI	CCCAGC	1 cut(s)	753
GsuI	CTGGAG	2 cut(s)	482, 1542
HaeIII	GGCC	6 cut(s)	302, 667, 861, 1213, 1218, 1781
HapII	CCGG	6 cut(s)	476, 726, 1219, 2034, 2047, 2089
HgaI	GACGC	4 cut(s)	183, 1055, 1830, 1847
Hin1I	GRCGYC	2 cut(s)	194, 1857
Hin1II	CATG	7 cut(s)	63, 652, 1289, 1339, 1526, 1568, 1623
HincII	GTYRAC	2 cut(s)	1406, 1962
HindII	GTYRAC	2 cut(s)	1406, 1962
HindIII	AAGCTT	1 cut(s)	1898
HinfI	GANTC	5 cut(s)	551, 880, 1196, 1445, 1555
HpaII	CCGG	6 cut(s)	476, 726, 1219, 2034, 2047, 2089
HphI	GGTGA	7 cut(s)	917, 1594, 1736, 1747, 1766, 1865, 2103
Hpy166II	GTNNAC	3 cut(s)	816, 1406, 1962
Hpy8I	GTNNAC	3 cut(s)	816, 1406, 1962
Hpy99I	CGWCG	1 cut(s)	1410
HpyAV	CCTTC	7 cut(s)	153, 994, 1469, 1653, 1810, 2014, 2021
HpyCH4III	ACNGT	4 cut(s)	181, 1315, 1483, 1824
HpyCH4IV	ACGT	2 cut(s)	1408, 1857
HpySE526I	ACGT	2 cut(s)	1408, 1857
Hsp92I	GRCGYC	2 cut(s)	194, 1857
Hsp92II	CATG	7 cut(s)	63, 652, 1289, 1339, 1526, 1568, 1623
Ksp22I	TGATCA	1 cut(s)	310
LguI	GCTCTTC	1 cut(s)	156
LmnI	GCTCC	3 cut(s)	266, 284, 498
LweI	GCATC	3 cut(s)	59, 139, 1558
MaeI	CTAG	3 cut(s)	200, 887, 1290
MaeII	ACGT	2 cut(s)	1408, 1857
MaeIII	GTNAC	8 cut(s)	169, 195, 376, 730, 1582, 1735, 1792, 1853
MbiI	CCGCTC	2 cut(s)	287, 1851
MboII	GAAGA	9 cut(s)	143, 234, 237, 315, 318, 560, 842, 1275, 1919
MfeI	CAATTG	2 cut(s)	897, 1449
MflI	RGATCY	3 cut(s)	1272, 1363, 2091
MhlI	GDGCHC	3 cut(s)	271, 495, 832
MlsI	TGGCCA	1 cut(s)	1781
MluI	ACGCGT	1 cut(s)	1839
MluNI	TGGCCA	1 cut(s)	1781
MlyI	GAGTC	4 cut(s)	545, 874, 1190, 1549
MmeI	TCCRAC	2 cut(s)	1033, 1510
Mox20I	TGGCCA	1 cut(s)	1781
MroXI	GAANNNNTTC	1 cut(s)	1315
MscI	TGGCCA	1 cut(s)	1781
MseI	TTAA	8 cut(s)	570, 605, 797, 996, 1110, 1277, 1380, 1926
MslI	CAYNNNNRTG	2 cut(s)	58, 728
Msp20I	TGGCCA	1 cut(s)	1781
MspA1I	CMGCKG	2 cut(s)	821, 1751
MspI	CCGG	6 cut(s)	476, 726, 1219, 2034, 2047, 2089
MspR9I	CCNGG	9 cut(s)	346, 477, 660, 669, 867, 1215, 1347, 1560, 2048
MunI	CAATTG	2 cut(s)	897, 1449
Mva1269I	GAATGC	2 cut(s)	298, 1018
MvaI	CCWGG	7 cut(s)	346, 660, 669, 867, 1215, 1347, 1560
MvnI	CGCG	2 cut(s)	1841, 1983
NciI	CCSGG	2 cut(s)	477, 2048
NdeI	CATATG	1 cut(s)	1948
NheI	GCTAGC	1 cut(s)	1289
NlaIII	CATG	7 cut(s)	63, 652, 1289, 1339, 1526, 1568, 1623
NlaIV	GGNNCC	5 cut(s)	406, 446, 657, 717, 2093
NmuCI	GTSAC	6 cut(s)	169, 195, 730, 1582, 1735, 1853
NspI	RCATGY	1 cut(s)	63
OliI	CACNNNNGTG	1 cut(s)	728
PaeI	GCATGC	1 cut(s)	63
PaeR7I	CTCGAG	1 cut(s)	978
PagI	TCATGA	1 cut(s)	1522
PaqCI	CACCTGC	1 cut(s)	1222
PceI	AGGCCT	1 cut(s)	1213
PciSI	GCTCTTC	1 cut(s)	156
PctI	GAATGC	2 cut(s)	298, 1018
PdmI	GAANNNNTTC	1 cut(s)	1315
PfeI	GAWTC	1 cut(s)	1445
PfoI	TCCNGGA	2 cut(s)	475, 865
PleI	GAGTC	4 cut(s)	545, 874, 1190, 1549
PpsI	GAGTC	4 cut(s)	545, 874, 1190, 1549
PpuMI	RGGWCCY	1 cut(s)	2008
PshAI	GACNNNNGTC	2 cut(s)	1589, 1825
Psp124BI	GAGCTC	1 cut(s)	495
Psp5II	RGGWCCY	1 cut(s)	2008
Psp6I	CCWGG	7 cut(s)	344, 658, 667, 865, 1213, 1345, 1558
PspEI	GGTNACC	1 cut(s)	1792
PspFI	CCCAGC	1 cut(s)	749
PspGI	CCWGG	7 cut(s)	344, 658, 667, 865, 1213, 1345, 1558
PspN4I	GGNNCC	5 cut(s)	406, 446, 657, 717, 2093
PspPI	GGNCC	5 cut(s)	656, 665, 860, 1820, 2008
PspPPI	RGGWCCY	1 cut(s)	2008
PstI	CTGCAG	3 cut(s)	1636, 1708, 2104
PstNI	CAGNNNCTG	2 cut(s)	941, 2120
PsuI	RGATCY	3 cut(s)	1272, 1363, 2091
PvuII	CAGCTG	2 cut(s)	821, 1751
RsaI	GTAC	1 cut(s)	94
RsaNI	GTAC	1 cut(s)	93
RseI	CAYNNNNRTG	2 cut(s)	58, 728
SacI	GAGCTC	1 cut(s)	495
SalI	GTCGAC	1 cut(s)	1404
SapI	GCTCTTC	1 cut(s)	156
SaqAI	TTAA	8 cut(s)	570, 605, 797, 996, 1110, 1277, 1380, 1926
Sau96I	GGNCC	5 cut(s)	656, 665, 860, 1820, 2008
ScaI	AGTACT	1 cut(s)	94
SchI	GAGTC	4 cut(s)	545, 874, 1190, 1549
ScrFI	CCNGG	9 cut(s)	346, 477, 660, 669, 867, 1215, 1347, 1560, 2048
SduI	GDGCHC	3 cut(s)	271, 495, 832
SfaNI	GCATC	3 cut(s)	59, 139, 1558
SfcI	CTRYAG	3 cut(s)	1632, 1704, 2100
Sfr274I	CTCGAG	1 cut(s)	978
SinI	GGWCC	3 cut(s)	656, 1820, 2008
SlaI	CTCGAG	1 cut(s)	978
SmiMI	CAYNNNNRTG	2 cut(s)	58, 728
SmlI	CTYRAG	4 cut(s)	543, 628, 978, 2015
SmoI	CTYRAG	4 cut(s)	543, 628, 978, 2015
SphI	GCATGC	1 cut(s)	63
SseBI	AGGCCT	1 cut(s)	1213
SsiI	CCGC	6 cut(s)	88, 287, 303, 1686, 1851, 1981
SspMI	CTAG	3 cut(s)	200, 887, 1290
SstI	GAGCTC	1 cut(s)	495
StuI	AGGCCT	1 cut(s)	1213
StyD4I	CCNGG	9 cut(s)	344, 475, 658, 667, 865, 1213, 1345, 1558, 2046
TaaI	ACNGT	4 cut(s)	181, 1315, 1483, 1824
TaiI	ACGT	2 cut(s)	1411, 1860
TaqI	TCGA	5 cut(s)	522, 738, 832, 979, 1405
TatI	WGTACW	1 cut(s)	92
TauI	GCSGC	1 cut(s)	305
TfiI	GAWTC	1 cut(s)	1445
Tru1I	TTAA	8 cut(s)	570, 605, 797, 996, 1110, 1277, 1380, 1926
Tru9I	TTAA	8 cut(s)	570, 605, 797, 996, 1110, 1277, 1380, 1926
TscAI	CASTG	4 cut(s)	1156, 1360, 1777, 2121
TseFI	GTSAC	6 cut(s)	169, 195, 730, 1582, 1735, 1853
Tsp45I	GTSAC	6 cut(s)	169, 195, 730, 1582, 1735, 1853
TspRI	CASTG	4 cut(s)	1156, 1360, 1777, 2121
VpaK11BI	GGWCC	3 cut(s)	656, 1820, 2008
XagI	CCTNNNNNAGG	2 cut(s)	438, 1207
XapI	RAATTY	5 cut(s)	103, 791, 834, 2042, 2063
XceI	RCATGY	1 cut(s)	63
XcmI	CCANNNNNNNNNTGG	1 cut(s)	709
XhoI	CTCGAG	1 cut(s)	978
XmiI	GTMKAC	1 cut(s)	1405
XmnI	GAANNNNTTC	1 cut(s)	1315
XspI	CTAG	3 cut(s)	200, 887, 1290
ZraI	GACGTC	1 cut(s)	1858
ZrmI	AGTACT	1 cut(s)	94

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.