pycom17g26450

photosynthetic electron transport in photosystem I

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
24734896 .. 24736759
1864 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1221 bp
ATGCTTAAGGCTGAGCCAAGAGAAAAAGTGGTAGTGTCCAAAATATACATCCAAACAAAACAGTTGAGCAAAAAGGATGAGCCTCCTAACAAACTAGTGACTAGAGTGTGTGGAAGCTGTCAAAAGCTTCTTCATTCTCTCTCTCTTACTCCCATGGCTTCTCTTCTTTCCTTCTCTGTTCCCACTTCAAAGATGATAAGAGCTTCTTCAACAGCTGCTTCTGCACCGGCACTTTCGGTTCCAGAGACCCTAAGTGACAAATTTGGCAGAAAAGGCATCAAGTTTTCGGAGTCGGACAGCGTCCCAATTGTTGAGCTCACAGTCAGAAATGGAAGTTCATTAAAGCTTCAAATACCCAATGCCCATGTGACTTCATACAAGCCAAAGGTGTACTGGAAAGACGACGGCTTTCAGGAGGTTCTGTACACCATTCCAGGCAATGAAACGGATTCTATCAAAGCCAAGGGGGGAATTGGTTTGGTTTTGAATGATGCATCGGAAGCAGGCGCTAAAGGCTCACTTCTTTCCGCTTCCGAATGGACAGTTAAAGATGTTGATTCCGATGCCATCGATGCTCTCCAGGTTGAACTCAGCAGCACTAGTGGAACACTTGATATAACATATGTTGTGACACTCTATCCAGTAAGCATGGCAACGGCTGTGATTGTGAAAAACAAAGGCCGGAAGCCGGTGACTATGACGAATGCTATACTCAGCCACTTCAAATTTAAACGACGAGGCGGAGCAGCAATCCAAGGTCTCAAGGGATGTGGCTACACTGCGCACCCTCCACCATCTTCTCCTTTCGAAATTATGTCTCCCGGTGAAGCAATGAAAGCTGACACTCCAGGGTGGTTCTCTTTCGGTTCTGAGGATCGAGAAAAACCAGGTTCCTGGAGCCGGCAGGATGTGCCGTACACCATTTTGAAAAACAAGCTCAGCAGAGTCTATGCTGCGCCTCCTCAAGAGAGACTGAAGCCCGTTTATAACACCCCACCTTCAAAATATGAAACACTGGATCAGGGGCGTGATTTGTTCTACAGGGTGATATGCATGGGATTTGAGGATATATATTTGTCGAGTCCTGGTTCTTTCTATGAGAAATATGGCAGTAAGGAGTACTTTACATGCACTGGACCAGCTTCATTGCTCGTTCCTGTGGTTATTAACCCTGCTGAGGAATGGAGAGGAGCTCAAGTTATTGAGCACGATAATTTGTAG

Protein Analysis

407

Amino Acids

44.38

Weight (kDa)

8.91

Isoelectric Point (pI)

36.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013539)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 987
Acc16I TGCGCA 1 cut(s) 783
AciI CCGC 2 cut(s) 528, 741
AclWI GGATC 2 cut(s) 882, 1026
AcsI RAATTY 2 cut(s) 260, 725
AcuI CTGAAG 1 cut(s) 995
AfaI GTAC 4 cut(s) 392, 425, 917, 1121
AfiI CCNNNNNNNGG 3 cut(s) 688, 900, 1177
AflII CTTAAG 1 cut(s) 5
AgsI TTSAA 8 cut(s) 189, 210, 350, 487, 587, 724, 928, 1002
AhlI ACTAGT 2 cut(s) 94, 599
AjnI CCWGG 6 cut(s) 433, 579, 847, 886, 893, 1084
Alw21I GWGCWC 3 cut(s) 318, 1195, 1209
Alw26I GTCTC 4 cut(s) 239, 764, 822, 964
AlwI GGATC 2 cut(s) 882, 1026
AoxI GGCC 1 cut(s) 679
ApeKI GCWGC 4 cut(s) 215, 594, 746, 953
ApoI RAATTY 2 cut(s) 260, 725
AspLEI GCGC 3 cut(s) 509, 784, 958
AspS9I GGNCC 1 cut(s) 1136
AsuC2I CCSGG 1 cut(s) 822
AsuHPI GGTGA 3 cut(s) 703, 836, 1057
AsuII TTCGAA 1 cut(s) 807
AvaII GGWCC 1 cut(s) 1136
BanII GRGCYC 2 cut(s) 318, 1195
Bbv12I GWGCWC 3 cut(s) 318, 1195, 1209
BbvCI CCTCAGC 1 cut(s) 1176
BbvI GCAGC 4 cut(s) 202, 606, 758, 940
BccI CCATC 2 cut(s) 575, 802
BceAI ACGGC 3 cut(s) 421, 672, 898
BciT130I CCWGG 6 cut(s) 435, 581, 849, 888, 895, 1086
BcnI CCSGG 1 cut(s) 822
BcoDI GTCTC 4 cut(s) 239, 764, 822, 964
BcuI ACTAGT 2 cut(s) 94, 599
BfaI CTAG 3 cut(s) 95, 102, 600
BfmI CTRYAG 1 cut(s) 1039
BfoI RGCGCY 1 cut(s) 510
BfrI CTTAAG 1 cut(s) 5
BisI GCNGC 4 cut(s) 216, 595, 747, 954
BlpI GCTNAGC 2 cut(s) 12, 938
BlsI GCNGC 4 cut(s) 217, 596, 748, 955
BmcAI AGTACT 1 cut(s) 1121
Bme1390I CCNGG 7 cut(s) 435, 581, 822, 849, 888, 895, 1086
Bme18I GGWCC 1 cut(s) 1136
BmgT120I GGNCC 1 cut(s) 1136
BmiI GGNNCC 3 cut(s) 240, 892, 899
BmrFI CCNGG 7 cut(s) 435, 581, 822, 849, 888, 895, 1086
BmsI GCATC 5 cut(s) 285, 481, 503, 553, 562
BplI GAGNNNNNCTC 2 cut(s) 1177, 1209
BpmI CTGGAG 3 cut(s) 563, 831, 916
Bpu10I CCTNAGC 1 cut(s) 1176
Bpu1102I GCTNAGC 2 cut(s) 12, 938
Bpu14I TTCGAA 1 cut(s) 807
BpuEI CTTGAG 3 cut(s) 746, 948, 1179
BpuMI CCSGG 1 cut(s) 822
Bsa29I ATCGAT 1 cut(s) 570
BsaI GGTCTC 2 cut(s) 239, 764
BsaJI CCNNGG 4 cut(s) 153, 462, 754, 848
BsaXI ACNNNNNCTCC 4 cut(s) 407, 437, 1182, 1212
Bsc4I CCNNNNNNNGG 3 cut(s) 688, 900, 1177
Bse118I RCCGGY 3 cut(s) 226, 688, 900
Bse1I ACTGG 4 cut(s) 398, 641, 1020, 1138
Bse3DI GCAATG 3 cut(s) 445, 837, 1145
BseBI CCWGG 6 cut(s) 435, 581, 849, 888, 895, 1086
BseCI ATCGAT 1 cut(s) 570
BseDI CCNNGG 4 cut(s) 153, 462, 754, 848
BseGI GGATG 4 cut(s) 48, 82, 773, 913
BseLI CCNNNNNNNGG 3 cut(s) 688, 900, 1177
BseMI GCAATG 3 cut(s) 445, 837, 1145
BseMII CTCAG 5 cut(s) 604, 727, 861, 952, 1167
BseNI ACTGG 4 cut(s) 398, 641, 1020, 1138
BseRI GAGGAG 2 cut(s) 951, 1203
BseXI GCAGC 4 cut(s) 202, 606, 758, 940
BsgI GTGCAG 1 cut(s) 207
BshFI GGCC 1 cut(s) 681
BshVI ATCGAT 1 cut(s) 570
BsiHKAI GWGCWC 3 cut(s) 318, 1195, 1209
BsiSI CCGG 5 cut(s) 227, 682, 689, 822, 901
BslFI GGGAC 1 cut(s) 287
BslI CCNNNNNNNGG 3 cut(s) 688, 900, 1177
BsmAI GTCTC 4 cut(s) 239, 764, 822, 964
BsmFI GGGAC 1 cut(s) 287
BsmI GAATGC 1 cut(s) 709
BsnI GGCC 1 cut(s) 681
Bso31I GGTCTC 2 cut(s) 239, 764
Bsp119I TTCGAA 1 cut(s) 807
Bsp1286I GDGCHC 3 cut(s) 318, 1195, 1209
Bsp1407I TGTACA 1 cut(s) 423
Bsp143I GATC 2 cut(s) 874, 1018
Bsp1720I GCTNAGC 2 cut(s) 12, 938
Bsp19I CCATGG 1 cut(s) 153
BspACI CCGC 2 cut(s) 528, 741
BspANI GGCC 1 cut(s) 681
BspCNI CTCAG 6 cut(s) 4, 603, 726, 862, 951, 1168
BspDI ATCGAT 1 cut(s) 570
BspLI GGNNCC 3 cut(s) 240, 892, 899
BspPI GGATC 2 cut(s) 882, 1026
BspT104I TTCGAA 1 cut(s) 807
BspTI CTTAAG 1 cut(s) 5
BspTNI GGTCTC 2 cut(s) 239, 764
BsrDI GCAATG 3 cut(s) 445, 837, 1145
BsrFI RCCGGY 3 cut(s) 226, 688, 900
BsrGI TGTACA 1 cut(s) 423
BsrI ACTGG 4 cut(s) 398, 641, 1020, 1138
BssAI RCCGGY 3 cut(s) 226, 688, 900
BssECI CCNNGG 4 cut(s) 153, 462, 754, 848
BssMI GATC 2 cut(s) 874, 1018
BssT1I CCWWGG 3 cut(s) 153, 462, 754
Bst2UI CCWGG 6 cut(s) 435, 581, 849, 888, 895, 1086
Bst4CI ACNGT 3 cut(s) 63, 322, 544
Bst6I CTCTTC 1 cut(s) 168
BstAFI CTTAAG 1 cut(s) 5
BstAPI GCANNNNNTGC 1 cut(s) 910
BstAUI TGTACA 1 cut(s) 423
BstBI TTCGAA 1 cut(s) 807
BstC8I GCNNGC 2 cut(s) 505, 902
BstDEI CTNAG 7 cut(s) 12, 251, 590, 713, 870, 938, 1176
BstDSI CCRYGG 1 cut(s) 153
BstF5I GGATG 4 cut(s) 48, 82, 773, 913
BstH2I RGCGCY 1 cut(s) 510
BstHHI GCGC 3 cut(s) 509, 784, 958
BstKTI GATC 2 cut(s) 877, 1021
BstMAI GTCTC 4 cut(s) 239, 764, 822, 964
BstMBI GATC 2 cut(s) 874, 1018
BstMWI GCNNNNNNNGC 7 cut(s) 221, 273, 500, 513, 572, 836, 910
BstNI CCWGG 6 cut(s) 435, 581, 849, 888, 895, 1086
BstNSI RCATGY 1 cut(s) 1131
BstSCI CCNGG 7 cut(s) 433, 579, 820, 847, 886, 893, 1084
BstSFI CTRYAG 1 cut(s) 1039
BstV1I GCAGC 4 cut(s) 202, 606, 758, 940
BstXI CCANNNNNNTGG 1 cut(s) 894
Bsu15I ATCGAT 1 cut(s) 570
BsuRI GGCC 1 cut(s) 681
BsuTUI ATCGAT 1 cut(s) 570
BtgI CCRYGG 1 cut(s) 153
BtsCI GGATG 4 cut(s) 48, 82, 773, 913
BtsI GCAGTG 1 cut(s) 777
BtsIMutI CAGTG 3 cut(s) 777, 1013, 1131
Cac8I GCNNGC 2 cut(s) 505, 902
CfoI GCGC 3 cut(s) 509, 784, 958
Cfr10I RCCGGY 3 cut(s) 226, 688, 900
Cfr13I GGNCC 1 cut(s) 1136
ClaI ATCGAT 1 cut(s) 570
CseI GACGC 1 cut(s) 289
CsiI ACCWGGT 1 cut(s) 886
Csp6I GTAC 4 cut(s) 391, 424, 916, 1120
CspCI CAANNNNNGTGG 2 cut(s) 751, 786
CviAII CATG 5 cut(s) 154, 365, 649, 1054, 1128
CviQI GTAC 4 cut(s) 391, 424, 916, 1120
DdeI CTNAG 7 cut(s) 12, 251, 590, 713, 870, 938, 1176
DpnI GATC 2 cut(s) 876, 1020
DpnII GATC 2 cut(s) 874, 1018
DraI TTTAAA 1 cut(s) 730
Eam1104I CTCTTC 1 cut(s) 168
EarI CTCTTC 1 cut(s) 168
EciI GGCGGA 1 cut(s) 756
Ecl136II GAGCTC 2 cut(s) 316, 1193
Eco130I CCWWGG 3 cut(s) 153, 462, 754
Eco24I GRGCYC 2 cut(s) 318, 1195
Eco31I GGTCTC 2 cut(s) 239, 764
Eco47I GGWCC 1 cut(s) 1136
Eco53kI GAGCTC 2 cut(s) 316, 1193
Eco57I CTGAAG 1 cut(s) 995
EcoICRI GAGCTC 2 cut(s) 316, 1193
EcoRII CCWGG 6 cut(s) 433, 579, 847, 886, 893, 1084
EcoT14I CCWWGG 3 cut(s) 153, 462, 754
EcoT22I ATGCAT 2 cut(s) 496, 1055
EcoT38I GRGCYC 2 cut(s) 318, 1195
ErhI CCWWGG 3 cut(s) 153, 462, 754
FaeI CATG 5 cut(s) 157, 368, 652, 1057, 1131
FalI AAGNNNNNCTT 6 cut(s) 190, 222, 504, 536, 1106, 1138
FaqI GGGAC 1 cut(s) 287
FatI CATG 5 cut(s) 153, 364, 648, 1053, 1127
FauNDI CATATG 1 cut(s) 622
Fnu4HI GCNGC 4 cut(s) 216, 595, 747, 954
FokI GGATG 4 cut(s) 35, 89, 780, 920
FriOI GRGCYC 2 cut(s) 318, 1195
Fsp4HI GCNGC 4 cut(s) 216, 595, 747, 954
FspBI CTAG 3 cut(s) 95, 102, 600
FspI TGCGCA 1 cut(s) 783
GlaI GCGC 3 cut(s) 508, 783, 957
GluI GCNGC 4 cut(s) 216, 595, 747, 954
GsuI CTGGAG 3 cut(s) 563, 831, 916
HaeII RGCGCY 1 cut(s) 510
HaeIII GGCC 1 cut(s) 681
HapII CCGG 5 cut(s) 227, 682, 689, 822, 901
HgaI GACGC 1 cut(s) 289
HhaI GCGC 3 cut(s) 509, 784, 958
Hin1II CATG 5 cut(s) 157, 368, 652, 1057, 1131
Hin6I GCGC 3 cut(s) 507, 782, 956
HinP1I GCGC 3 cut(s) 507, 782, 956
HindIII AAGCTT 2 cut(s) 125, 344
HinfI GANTC 5 cut(s) 290, 449, 557, 945, 1081
HpaII CCGG 5 cut(s) 227, 682, 689, 822, 901
HphI GGTGA 3 cut(s) 703, 836, 1057
Hpy166II GTNNAC 3 cut(s) 391, 426, 918
Hpy188I TCNGA 7 cut(s) 289, 295, 326, 499, 535, 562, 871
Hpy188III TCNNGA 4 cut(s) 242, 413, 878, 965
Hpy8I GTNNAC 3 cut(s) 391, 426, 918
Hpy99I CGWCG 2 cut(s) 407, 738
HpyAV CCTTC 2 cut(s) 181, 1008
HpyCH4III ACNGT 3 cut(s) 63, 322, 544
HpyCH4V TGCA 4 cut(s) 224, 494, 1053, 1131
HpyF10VI GCNNNNNNNGC 7 cut(s) 221, 273, 500, 513, 572, 836, 910
HpyF3I CTNAG 7 cut(s) 12, 251, 590, 713, 870, 938, 1176
Hsp92II CATG 5 cut(s) 157, 368, 652, 1057, 1131
HspAI GCGC 3 cut(s) 507, 782, 956
KroI GCCGGC 1 cut(s) 900
KroNI GCCGGC 1 cut(s) 902
Kzo9I GATC 2 cut(s) 874, 1018
LmnI GCTCC 3 cut(s) 743, 897, 1190
Lsp1109I GCAGC 4 cut(s) 202, 606, 758, 940
LweI GCATC 5 cut(s) 285, 481, 503, 553, 562
MabI ACCWGGT 1 cut(s) 886
MaeI CTAG 3 cut(s) 95, 102, 600
MaeIII GTNAC 5 cut(s) 97, 254, 367, 628, 691
MalI GATC 2 cut(s) 876, 1020
MboI GATC 2 cut(s) 874, 1018
MboII GAAGA 4 cut(s) 122, 155, 198, 789
MfeI CAATTG 1 cut(s) 306
MhlI GDGCHC 3 cut(s) 318, 1195, 1209
MluCI AATT 6 cut(s) 260, 306, 471, 725, 810, 1213
MlyI GAGTC 3 cut(s) 299, 954, 1090
MmeI TCCRAC 1 cut(s) 273
Mph1103I ATGCAT 2 cut(s) 496, 1055
MroNI GCCGGC 1 cut(s) 900
MseI TTAA 5 cut(s) 6, 341, 546, 729, 1167
MspA1I CMGCKG 1 cut(s) 215
MspCI CTTAAG 1 cut(s) 5
MspI CCGG 5 cut(s) 227, 682, 689, 822, 901
MspR9I CCNGG 7 cut(s) 435, 581, 822, 849, 888, 895, 1086
MunI CAATTG 1 cut(s) 306
Mva1269I GAATGC 1 cut(s) 709
MvaI CCWGG 6 cut(s) 435, 581, 849, 888, 895, 1086
MwoI GCNNNNNNNGC 7 cut(s) 221, 273, 500, 513, 572, 836, 910
NaeI GCCGGC 1 cut(s) 902
NciI CCSGG 1 cut(s) 822
NcoI CCATGG 1 cut(s) 153
NdeI CATATG 1 cut(s) 622
NdeII GATC 2 cut(s) 874, 1018
NgoMIV GCCGGC 1 cut(s) 900
NlaIII CATG 5 cut(s) 157, 368, 652, 1057, 1131
NlaIV GGNNCC 3 cut(s) 240, 892, 899
NmuCI GTSAC 5 cut(s) 97, 254, 367, 628, 691
NsbI TGCGCA 1 cut(s) 783
NsiI ATGCAT 2 cut(s) 496, 1055
NspI RCATGY 1 cut(s) 1131
NspV TTCGAA 1 cut(s) 807
PctI GAATGC 1 cut(s) 709
PdiI GCCGGC 1 cut(s) 902
PfeI GAWTC 2 cut(s) 449, 557
PflFI GACNNNGTC 1 cut(s) 299
PfoI TCCNGGA 1 cut(s) 893
PkrI GCNGC 4 cut(s) 217, 596, 748, 955
PleI GAGTC 3 cut(s) 298, 953, 1089
PpsI GAGTC 3 cut(s) 298, 953, 1089
PsiI TTATAA 1 cut(s) 987
Psp124BI GAGCTC 2 cut(s) 318, 1195
Psp6I CCWGG 6 cut(s) 433, 579, 847, 886, 893, 1084
PspGI CCWGG 6 cut(s) 433, 579, 847, 886, 893, 1084
PspN4I GGNNCC 3 cut(s) 240, 892, 899
PspPI GGNCC 1 cut(s) 1136
PsyI GACNNNGTC 1 cut(s) 299
PvuII CAGCTG 1 cut(s) 215
RsaI GTAC 4 cut(s) 392, 425, 917, 1121
RsaNI GTAC 4 cut(s) 391, 424, 916, 1120
SacI GAGCTC 2 cut(s) 318, 1195
SaqAI TTAA 5 cut(s) 6, 341, 546, 729, 1167
SatI GCNGC 4 cut(s) 216, 595, 747, 954
Sau3AI GATC 2 cut(s) 874, 1018
Sau96I GGNCC 1 cut(s) 1136
ScaI AGTACT 1 cut(s) 1121
SchI GAGTC 3 cut(s) 299, 954, 1090
ScrFI CCNGG 7 cut(s) 435, 581, 822, 849, 888, 895, 1086
SduI GDGCHC 3 cut(s) 318, 1195, 1209
SexAI ACCWGGT 1 cut(s) 886
SfaNI GCATC 5 cut(s) 285, 481, 503, 553, 562
SfcI CTRYAG 1 cut(s) 1039
SfuI TTCGAA 1 cut(s) 807
SinI GGWCC 1 cut(s) 1136
SmlI CTYRAG 4 cut(s) 5, 761, 963, 1194
SmoI CTYRAG 4 cut(s) 5, 761, 963, 1194
SpeI ACTAGT 2 cut(s) 94, 599
Sse9I AATT 6 cut(s) 260, 306, 471, 725, 810, 1213
SsiI CCGC 2 cut(s) 528, 741
SspMI CTAG 3 cut(s) 95, 102, 600
SstI GAGCTC 2 cut(s) 318, 1195
StyD4I CCNGG 7 cut(s) 433, 579, 820, 847, 886, 893, 1084
StyI CCWWGG 3 cut(s) 153, 462, 754
TaaI ACNGT 3 cut(s) 63, 322, 544
TaqI TCGA 4 cut(s) 570, 807, 877, 1079
TasI AATT 6 cut(s) 260, 306, 471, 725, 810, 1213
TatI WGTACW 3 cut(s) 390, 423, 1119
TfiI GAWTC 2 cut(s) 449, 557
Tru1I TTAA 5 cut(s) 6, 341, 546, 729, 1167
Tru9I TTAA 5 cut(s) 6, 341, 546, 729, 1167
TscAI CASTG 3 cut(s) 784, 1020, 1138
TseFI GTSAC 5 cut(s) 97, 254, 367, 628, 691
TseI GCWGC 4 cut(s) 215, 594, 746, 953
Tsp45I GTSAC 5 cut(s) 97, 254, 367, 628, 691
TspDTI ATGAA 7 cut(s) 122, 327, 363, 456, 848, 1023, 1134
TspGWI ACGGA 1 cut(s) 461
TspRI CASTG 3 cut(s) 784, 1020, 1138
Tth111I GACNNNGTC 1 cut(s) 299
Vha464I CTTAAG 1 cut(s) 5
VpaK11BI GGWCC 1 cut(s) 1136
XapI RAATTY 2 cut(s) 260, 725
XceI RCATGY 1 cut(s) 1131
XcmI CCANNNNNNNNNTGG 1 cut(s) 390
XspI CTAG 3 cut(s) 95, 102, 600
ZrmI AGTACT 1 cut(s) 1121
Zsp2I ATGCAT 2 cut(s) 496, 1055
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.