pycom520g00800

Peptidyl-prolyl cis-trans isomerase

Basic Information

Type: gene
Biological Identity
pyrus_communis
SuperScaffold_520
Physical Location & Seq
Forward (+)
637355 .. 640095
2741 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1902 bp
ATGGCTAGAATTAGGGGAATGCACGGCAAAGGATGGTGGAAAGTGTATGGAATGTGGCTGCAATATGAAAAGAATGACTATTTAATGCATGTAGGGGGAATGCACGGCAAAGGGTGGTGGAAAGTGTATGGAATGTGGCTGCAATATGAAAAGAATGACTATTTAATGCATGTAGGGCACGGAAAAGGATGGTGGAAAGTGTATGGAATGTGGCTGCAATATGAAAAGAATGACTATTTAATGCATGTAGGTGCCTACAAGGCCTTCAAAGTGGCTAGAAAATACGGACGTTTAAGTTTAGGAAAGGTTACCAAAACGGGAAACCTAGGGTTAACTTTCCTACTTCAATCTTCAACTCATTCATTCCTCTTTCGCTCCAAAAGACTCCAATTTGCATCTTCTTGCACACTTTGGCCTTATAATCTGAAAATACACAAAATGCACGAGAACAAGCTAATTAAGTCGCATGAATATGCTCCTATCAGCCTTTGTTTAACAAAAGTTAAACCGTTAACTGTCAAGTACCCAATCATTTATTTCATAAAAAATTCTATGCTCCGAAGGGCGTTGTCTATATTTTGTGGCTACCTCAGTGTTGTCTTAAACATTAGAATACATGGCCGAAGTCATTTCTCGACAGGTCTAAAAACATTTCTCTTTTGTCATTCTCATTTTTATTTTGCTCATTTAACATTTCTTTTATGCAACGGCAAGCTCTTCGGTAGTCTTGATCGAGTCCAATGCTCTAACCAAACTGCAATAGACTATATCCTTTTCGGCTTTGCAAGCTCTTCCCACAAAAAGTCTCGACTCTGTTGGAGATGTTGTTCACTTGACGACTGTCTTAAAGCGAACTCGGAGGACCTAGAAACTACAACGGCTGCTCAGGAGGCTATCTTACCAGAGTTAGAGGCAATCAATGTGAAGAAAGAGAGAATGGCAGATCTCGACCATCAAATCGTCAAGCTTCAATCCCAAATATCTATCATTGCCTCTGAGATTGAGAAGGATTTTGAGGCAAACAAACCTCAGCTGGCAAAGTATGCGACCTTTGGGAAATGGATACAAGCACTAAATAAATGGCTAGAGCTAAAAGCTACACTTGAAGCCTTCCTTCCTCGACCCCATAGATTATGTTCCCACTACCGACCTGTGGACCAATTGATTTTTCTTTTACATACCTTTTGTAATTTCTTTAAAAACTTCCCATTAATCGGTAACTTGTGTACCAAACCAGTTTGGTCCTTAAGATGGTATGCCCCCTTGAACGCATATTTTATCACTTATTGTACACCGAATAGGGGTGGGCACTTGGAACCGAAAACCGAAATCGAAACACGAATCAAATGGAACCGAATCGAACGGTTTGATTTTGAAATAGTTGCGGTTTCGAAACCAAATTATATTAAATGTCATGTTTTAATTGGTTCTTTATTAGAGTCCATACACTTAAAGTATAGACTCAACTACACAATGTATGCCATAGTCCTACATCAATGTTTTTCACATATTGTATTGCCTAAACGAATCAAGGAAAATGCGGTTCTAATTGAAAATCTAATTAGTAGTACTCCTAATTATCAAAGTATACAAGAAGAGCAATCAATTCTCTCAGTTCCGCTCAAACAACATAAGACCTTGACTAGCATAGCAATCTCACCTGGTTGCTACCATGACTGGAGAAAAAACACACTCAACATTTTCTCTTCCTTCTCGAACCAAAACCAGAAGAACCAAAAATCCAAGAAGAAAAAAAAAATCTCAAAAATCGAATCAAAACCGTTTGAAACCACACCAAAAAGTTTGGTTTCATTTTGGTTTTGGCTTCAAAACCGCACCGCAAAATGTTTCAGTTTCGGTTGCGGTTTAAACCGCACCGAACTGCACCGTGCCCACCCCTAA

Protein Analysis

634

Amino Acids

73.96

Weight (kDa)

9.67

Isoelectric Point (pI)

46.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 420
AccB1I GGYRCC 1 cut(s) 251
AccBSI CCGCTC 1 cut(s) 1621
AccI GTMKAC 1 cut(s) 1588
AciI CCGC 7 cut(s) 1385, 1541, 1619, 1834, 1839, 1863, 1873
AcoI YGGCCR 1 cut(s) 619
AcsI RAATTY 1 cut(s) 547
AfaI GTAC 4 cut(s) 524, 1228, 1291, 1570
AfiI CCNNNNNNNGG 4 cut(s) 1153, 1214, 1251, 1301
AflII CTTAAG 1 cut(s) 1246
AjnI CCWGG 1 cut(s) 1660
AjuI GAANNNNNNNTTGG 2 cut(s) 1152, 1184
AloI GAACNNNNNNTCC 4 cut(s) 811, 843, 1724, 1756
AluBI AGCT 7 cut(s) 454, 715, 789, 967, 1033, 1090, 1097
AluI AGCT 7 cut(s) 454, 715, 789, 967, 1033, 1090, 1097
Alw26I GTCTC 1 cut(s) 810
AoxI GGCC 3 cut(s) 261, 413, 619
ApeKI GCWGC 4 cut(s) 58, 139, 214, 881
ApoI RAATTY 1 cut(s) 547
AseI ATTAAT 1 cut(s) 1211
AspA2I CCTAGG 1 cut(s) 325
AspS9I GGNCC 3 cut(s) 862, 1156, 1242
AsuHPI GGTGA 1 cut(s) 1650
AsuII TTCGAA 1 cut(s) 1391
AvaII GGWCC 3 cut(s) 862, 1156, 1242
AvrII CCTAGG 1 cut(s) 325
BaeGI GKGCMC 3 cut(s) 180, 1311, 1894
BaeI ACNNNNGTAYC 2 cut(s) 1210, 1243
BanI GGYRCC 1 cut(s) 251
BauI CACGAG 1 cut(s) 443
BbvCI CCTCAGC 1 cut(s) 1029
BbvI GCAGC 4 cut(s) 45, 126, 201, 868
BccI CCATC 4 cut(s) 27, 183, 960, 1245
BceAI ACGGC 4 cut(s) 40, 121, 724, 894
BcgI CGANNNNNNTGC 4 cut(s) 700, 723, 734, 757
BciT130I CCWGG 1 cut(s) 1662
BciVI GTATCC 1 cut(s) 1056
BcoDI GTCTC 1 cut(s) 810
BfaI CTAG 6 cut(s) 6, 276, 326, 866, 1085, 1644
BfrI CTTAAG 1 cut(s) 1246
BfuI GTATCC 1 cut(s) 1056
BglI GCCNNNNNGGC 1 cut(s) 260
BglII AGATCT 1 cut(s) 943
BisI GCNGC 4 cut(s) 59, 140, 215, 882
BlnI CCTAGG 1 cut(s) 325
BlsI GCNGC 4 cut(s) 60, 141, 216, 883
BmcAI AGTACT 1 cut(s) 1570
Bme1390I CCNGG 1 cut(s) 1662
Bme18I GGWCC 3 cut(s) 862, 1156, 1242
BmgT120I GGNCC 3 cut(s) 862, 1156, 1242
BmiI GGNNCC 3 cut(s) 253, 1317, 1352
BmrFI CCNGG 1 cut(s) 1662
BmsI GCATC 1 cut(s) 404
BoxI GACNNNNGTC 1 cut(s) 840
BpmI CTGGAG 1 cut(s) 1699
Bpu10I CCTNAGC 2 cut(s) 885, 1029
Bpu14I TTCGAA 1 cut(s) 1391
BsaJI CCNNGG 1 cut(s) 325
BsaXI ACNNNNNCTCC 2 cut(s) 811, 841
Bsc4I CCNNNNNNNGG 4 cut(s) 1153, 1214, 1251, 1301
Bse1I ACTGG 2 cut(s) 1235, 1682
Bse3DI GCAATG 1 cut(s) 987
BseBI CCWGG 1 cut(s) 1662
BseDI CCNNGG 1 cut(s) 325
BseGI GGATG 2 cut(s) 38, 194
BseLI CCNNNNNNNGG 4 cut(s) 1153, 1214, 1251, 1301
BseMI GCAATG 1 cut(s) 987
BseMII CTCAG 5 cut(s) 604, 899, 987, 1043, 1626
BseNI ACTGG 2 cut(s) 1235, 1682
BseSI GKGCMC 3 cut(s) 180, 1311, 1894
BseXI GCAGC 4 cut(s) 45, 126, 201, 868
BsgI GTGCAG 1 cut(s) 1868
BshFI GGCC 3 cut(s) 263, 415, 621
BshNI GGYRCC 1 cut(s) 251
BslI CCNNNNNNNGG 4 cut(s) 1153, 1214, 1251, 1301
BsmAI GTCTC 1 cut(s) 810
BsmI GAATGC 2 cut(s) 24, 105
BsnI GGCC 3 cut(s) 263, 415, 621
Bsp119I TTCGAA 1 cut(s) 1391
Bsp1286I GDGCHC 3 cut(s) 180, 1311, 1894
Bsp1407I TGTACA 1 cut(s) 1289
Bsp143I GATC 2 cut(s) 730, 943
BspACI CCGC 7 cut(s) 1385, 1541, 1619, 1834, 1839, 1863, 1873
BspANI GGCC 3 cut(s) 263, 415, 621
BspCNI CTCAG 5 cut(s) 603, 898, 988, 1042, 1625
BspLI GGNNCC 3 cut(s) 253, 1317, 1352
BspQI GCTCTTC 3 cut(s) 722, 796, 1590
BspT104I TTCGAA 1 cut(s) 1391
BspT107I GGYRCC 1 cut(s) 251
BspTI CTTAAG 1 cut(s) 1246
BsrBI CCGCTC 1 cut(s) 1621
BsrDI GCAATG 1 cut(s) 987
BsrGI TGTACA 1 cut(s) 1289
BsrI ACTGG 2 cut(s) 1235, 1682
BssECI CCNNGG 1 cut(s) 325
BssMI GATC 2 cut(s) 730, 943
BssNAI GTATAC 1 cut(s) 1589
BssSI CACGAG 1 cut(s) 443
BssT1I CCWWGG 1 cut(s) 325
Bst1107I GTATAC 1 cut(s) 1589
Bst2BI CACGAG 1 cut(s) 443
Bst2UI CCWGG 1 cut(s) 1662
Bst4CI ACNGT 6 cut(s) 510, 517, 842, 1365, 1782, 1889
Bst6I CTCTTC 4 cut(s) 722, 796, 1590, 1711
BstAFI CTTAAG 1 cut(s) 1246
BstAPI GCANNNNNTGC 1 cut(s) 1043
BstAUI TGTACA 1 cut(s) 1289
BstBI TTCGAA 1 cut(s) 1391
BstC8I GCNNGC 3 cut(s) 713, 787, 1035
BstDEI CTNAG 5 cut(s) 590, 885, 996, 1029, 1612
BstEII GGTNACC 1 cut(s) 307
BstF5I GGATG 2 cut(s) 38, 194
BstKTI GATC 2 cut(s) 733, 946
BstMAI GTCTC 1 cut(s) 810
BstMBI GATC 2 cut(s) 730, 943
BstMWI GCNNNNNNNGC 5 cut(s) 175, 260, 786, 890, 1043
BstNI CCWGG 1 cut(s) 1662
BstNSI RCATGY 3 cut(s) 92, 173, 248
BstPAI GACNNNNGTC 1 cut(s) 840
BstPI GGTNACC 1 cut(s) 307
BstSCI CCNGG 1 cut(s) 1660
BstSLI GKGCMC 3 cut(s) 180, 1311, 1894
BstV1I GCAGC 4 cut(s) 45, 126, 201, 868
BstX2I RGATCY 1 cut(s) 943
BstYI RGATCY 1 cut(s) 943
BstZ17I GTATAC 1 cut(s) 1589
BsuI GTATCC 1 cut(s) 1056
BsuRI GGCC 3 cut(s) 263, 415, 621
BtsCI GGATG 2 cut(s) 38, 194
BtsIMutI CAGTG 1 cut(s) 598
Cac8I GCNNGC 3 cut(s) 713, 787, 1035
Cfr13I GGNCC 3 cut(s) 862, 1156, 1242
CsiI ACCWGGT 1 cut(s) 1660
Csp6I GTAC 4 cut(s) 523, 1227, 1290, 1569
CviAII CATG 7 cut(s) 89, 170, 245, 467, 617, 1415, 1673
CviQI GTAC 4 cut(s) 523, 1227, 1290, 1569
DdeI CTNAG 5 cut(s) 590, 885, 996, 1029, 1612
DpnI GATC 2 cut(s) 732, 945
DpnII GATC 2 cut(s) 730, 943
DraI TTTAAA 2 cut(s) 1198, 1869
EaeI YGGCCR 1 cut(s) 619
Eam1104I CTCTTC 4 cut(s) 722, 796, 1590, 1711
EarI CTCTTC 4 cut(s) 722, 796, 1590, 1711
Eco130I CCWWGG 1 cut(s) 325
Eco147I AGGCCT 1 cut(s) 263
Eco47I GGWCC 3 cut(s) 862, 1156, 1242
Eco91I GGTNACC 1 cut(s) 307
EcoO109I RGGNCCY 1 cut(s) 862
EcoO65I GGTNACC 1 cut(s) 307
EcoRII CCWGG 1 cut(s) 1660
EcoT14I CCWWGG 1 cut(s) 325
EcoT22I ATGCAT 3 cut(s) 90, 171, 246
ErhI CCWWGG 1 cut(s) 325
FaeI CATG 7 cut(s) 92, 173, 248, 470, 620, 1418, 1676
FalI AAGNNNNNCTT 4 cut(s) 1086, 1118, 1098, 1130
FatI CATG 7 cut(s) 88, 169, 244, 466, 616, 1414, 1672
FblI GTMKAC 1 cut(s) 1588
Fnu4HI GCNGC 4 cut(s) 59, 140, 215, 882
FokI GGATG 2 cut(s) 45, 201
Fsp4HI GCNGC 4 cut(s) 59, 140, 215, 882
FspBI CTAG 6 cut(s) 6, 276, 326, 866, 1085, 1644
GluI GCNGC 4 cut(s) 59, 140, 215, 882
GsuI CTGGAG 1 cut(s) 1699
HaeIII GGCC 3 cut(s) 263, 415, 621
Hin1II CATG 7 cut(s) 92, 173, 248, 470, 620, 1418, 1676
HincII GTYRAC 2 cut(s) 333, 513
HindII GTYRAC 2 cut(s) 333, 513
HindIII AAGCTT 1 cut(s) 965
HinfI GANTC 9 cut(s) 384, 735, 810, 1341, 1356, 1439, 1461, 1527, 1772
HpaI GTTAAC 2 cut(s) 333, 513
HphI GGTGA 1 cut(s) 1650
Hpy166II GTNNAC 7 cut(s) 333, 513, 830, 1156, 1227, 1292, 1589
Hpy188I TCNGA 4 cut(s) 426, 560, 859, 997
Hpy188III TCNNGA 6 cut(s) 634, 728, 807, 887, 947, 1714
Hpy8I GTNNAC 7 cut(s) 333, 513, 830, 1156, 1227, 1292, 1589
HpyAV CCTTC 6 cut(s) 274, 555, 1000, 1120, 1124, 1720
HpyCH4III ACNGT 6 cut(s) 510, 517, 842, 1365, 1782, 1889
HpyCH4IV ACGT 1 cut(s) 289
HpyF10VI GCNNNNNNNGC 5 cut(s) 175, 260, 786, 890, 1043
HpyF3I CTNAG 5 cut(s) 590, 885, 996, 1029, 1612
HpySE526I ACGT 1 cut(s) 289
Hsp92II CATG 7 cut(s) 92, 173, 248, 470, 620, 1418, 1676
KspAI GTTAAC 2 cut(s) 333, 513
Kzo9I GATC 2 cut(s) 730, 943
LguI GCTCTTC 3 cut(s) 722, 796, 1590
LmnI GCTCC 3 cut(s) 380, 481, 561
Lsp1109I GCAGC 4 cut(s) 45, 126, 201, 868
LweI GCATC 1 cut(s) 404
MabI ACCWGGT 1 cut(s) 1660
MaeI CTAG 6 cut(s) 6, 276, 326, 866, 1085, 1644
MaeII ACGT 1 cut(s) 289
MaeIII GTNAC 2 cut(s) 307, 1217
MalI GATC 2 cut(s) 732, 945
MbiI CCGCTC 1 cut(s) 1621
MboI GATC 2 cut(s) 730, 943
MboII GAAGA 9 cut(s) 342, 390, 709, 783, 937, 1607, 1698, 1741, 1759
MfeI CAATTG 1 cut(s) 1160
MflI RGATCY 1 cut(s) 943
MhlI GDGCHC 3 cut(s) 180, 1311, 1894
MlyI GAGTC 5 cut(s) 378, 744, 804, 1448, 1455
MmeI TCCRAC 1 cut(s) 797
MnlI CCTC 9 cut(s) 377, 599, 853, 883, 904, 1003, 1009, 1038, 1128
Mph1103I ATGCAT 3 cut(s) 90, 171, 246
MslI CAYNNNNRTG 2 cut(s) 249, 471
MspA1I CMGCKG 1 cut(s) 1033
MspCI CTTAAG 1 cut(s) 1246
MspR9I CCNGG 1 cut(s) 1662
MssI GTTTAAAC 1 cut(s) 1869
MunI CAATTG 1 cut(s) 1160
Mva1269I GAATGC 2 cut(s) 24, 105
MvaI CCWGG 1 cut(s) 1662
MwoI GCNNNNNNNGC 5 cut(s) 175, 260, 786, 890, 1043
NdeII GATC 2 cut(s) 730, 943
NlaIII CATG 7 cut(s) 92, 173, 248, 470, 620, 1418, 1676
NlaIV GGNNCC 3 cut(s) 253, 1317, 1352
NsiI ATGCAT 3 cut(s) 90, 171, 246
NspI RCATGY 3 cut(s) 92, 173, 248
NspV TTCGAA 1 cut(s) 1391
PceI AGGCCT 1 cut(s) 263
PciSI GCTCTTC 3 cut(s) 722, 796, 1590
PctI GAATGC 2 cut(s) 24, 105
PfeI GAWTC 4 cut(s) 1341, 1356, 1527, 1772
PkrI GCNGC 4 cut(s) 60, 141, 216, 883
PleI GAGTC 5 cut(s) 378, 743, 804, 1447, 1455
PmeI GTTTAAAC 1 cut(s) 1869
PpsI GAGTC 5 cut(s) 378, 743, 804, 1447, 1455
PpuMI RGGWCCY 1 cut(s) 862
PshAI GACNNNNGTC 1 cut(s) 840
PshBI ATTAAT 1 cut(s) 1211
PsiI TTATAA 1 cut(s) 420
Psp5II RGGWCCY 1 cut(s) 862
Psp6I CCWGG 1 cut(s) 1660
PspEI GGTNACC 1 cut(s) 307
PspGI CCWGG 1 cut(s) 1660
PspN4I GGNNCC 3 cut(s) 253, 1317, 1352
PspPI GGNCC 3 cut(s) 862, 1156, 1242
PspPPI RGGWCCY 1 cut(s) 862
PsuI RGATCY 1 cut(s) 943
PvuII CAGCTG 1 cut(s) 1033
RsaI GTAC 4 cut(s) 524, 1228, 1291, 1570
RsaNI GTAC 4 cut(s) 523, 1227, 1290, 1569
RseI CAYNNNNRTG 2 cut(s) 249, 471
SapI GCTCTTC 3 cut(s) 722, 796, 1590
SatI GCNGC 4 cut(s) 59, 140, 215, 882
Sau3AI GATC 2 cut(s) 730, 943
Sau96I GGNCC 3 cut(s) 862, 1156, 1242
ScaI AGTACT 1 cut(s) 1570
SchI GAGTC 5 cut(s) 378, 744, 804, 1448, 1455
ScrFI CCNGG 1 cut(s) 1662
SduI GDGCHC 3 cut(s) 180, 1311, 1894
SexAI ACCWGGT 1 cut(s) 1660
SfaNI GCATC 1 cut(s) 404
SfuI TTCGAA 1 cut(s) 1391
SinI GGWCC 3 cut(s) 862, 1156, 1242
SmiMI CAYNNNNRTG 2 cut(s) 249, 471
SmlI CTYRAG 1 cut(s) 1246
SmoI CTYRAG 1 cut(s) 1246
SseBI AGGCCT 1 cut(s) 263
SsiI CCGC 7 cut(s) 1385, 1541, 1619, 1834, 1839, 1863, 1873
SspMI CTAG 6 cut(s) 6, 276, 326, 866, 1085, 1644
StuI AGGCCT 1 cut(s) 263
StyD4I CCNGG 1 cut(s) 1660
StyI CCWWGG 1 cut(s) 325
TaaI ACNGT 6 cut(s) 510, 517, 842, 1365, 1782, 1889
TaiI ACGT 1 cut(s) 292
TatI WGTACW 2 cut(s) 1289, 1568
TfiI GAWTC 4 cut(s) 1341, 1356, 1527, 1772
TscAI CASTG 1 cut(s) 598
TseI GCWGC 4 cut(s) 58, 139, 214, 881
TspDTI ATGAA 7 cut(s) 81, 162, 237, 351, 483, 529, 1800
TspGWI ACGGA 2 cut(s) 195, 300
TspRI CASTG 1 cut(s) 598
Vha464I CTTAAG 1 cut(s) 1246
VpaK11BI GGWCC 3 cut(s) 862, 1156, 1242
VspI ATTAAT 1 cut(s) 1211
XapI RAATTY 1 cut(s) 547
XceI RCATGY 3 cut(s) 92, 173, 248
XmaJI CCTAGG 1 cut(s) 325
XmiI GTMKAC 1 cut(s) 1588
XspI CTAG 6 cut(s) 6, 276, 326, 866, 1085, 1644
ZrmI AGTACT 1 cut(s) 1570
Zsp2I ATGCAT 3 cut(s) 90, 171, 246
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.